Rorug06G0225200

Aldo-keto reductase-like isoform X1

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
36155463 .. 36178009
22547 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0225200.1

Sequence Viewer

Length: 1353 bp
ATGGCAAGAGTTTGTTGGCCATACTTTGATCCCGAGTATGAGAACCTGAGCACAAGAATCAATCCCCCGAGGGTCTCTGTGGACAACTCTAGCTGCAGTGACTTTACCCTAGTCAAGGTTGATAGTGTCAATAAGCCAGGAATTCTGCTTGAAGTTGTGCAAGTACTGACAGACCTTGACCTCATAATCGCTAAAGCCTATATCTCCTCTGATGGCGGATGGTTCATGGATGTGTTTCACGTCACTGATCAACAAGGAAAACAGATTACAGACAGAAAAACCATTGACCACATCGAGAAGGCTTTAGGACCAAAGGGCCACATCACAGAAGTAGTGAAGACTTGGCCAGGAAAAAGGGTTGGAGTGCATTCTGTAGGTGATCACACAGCCATTGAGCTAATTGGAAGAGACCGCCCAGGTCTCTTATCTGAGATCTCCGCTGTCCTTGCCGACCTCCACTTTAACGTAGTTGCTGCTGAAGTATGGACACACAACAGAAGAATAGCCTGTGTTCTTTATGTCAATGATACTACATGCCAACCTGTGGACAATCCATCCAGATTATCTACCATCGAAGAGAGACTCAAGAACATCTTACGCGGGTGCGAGGATGATGACAATGTAGGTCACACCAGTTTCTCTATGGGGTTCACTCATGTGGATAGACGGCTCCACCAGATGTTGTTTGCTGATAGGGATTATGAGGGCCGTGGTGGATTATCAAATGAGATTGATTTTCCTGCCTGCTTCCAACCCAAGATCACCATTGAGCGTTGGGAAGAAAAGGGATACTCGGTGGTCAGTGTCCGGTGCAAAGATCGTGCAAAACTTATGTTTGACATTGTATGCACACTCACTGATATGGAATATGTTGTTTTCCATGCCACCATCTCGTCTGATGGTCCATATGCATCACAGGAGTATTATATTCGTCACATGGATGGTTGCACCCTTGATACTGAAGGCGAGAAGGAAAGGGTAGTCAAATGTATTGACGCTGCAATTCGGAGAAGAGTAAGCGAGGGTCTTAGGCTAGAGCTATGTGCAAAGGATAGGGTAGGCTTGCTATCAGAAGTAACAAGGATCCTGAGGGAGAATGGATTATCAGTTATAAGAGCAGGTGTCTCAACCATTGGGGAACAAGGAATGAACGTCTTTTATGTTAGAGATTCTTCAGGGAATTCAGTGGACATACAGAAAATTGAAGCTCTTCGTAAAGAAATTGGACACAAAATGATGTTCAACGTGAAGAAAATTTCAACGAGTTCCAAGGCACCTGAGACACCTGAGACTAGTGGATGGGCCAAGACAAGCTTCTTCTTCGGCAACTTGTTAGAGAGGTTCTTGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

450

Amino Acids

50.66

Weight (kDa)

5.95

Isoelectric Point (pI)

42.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ACT_ACR9_3rd PF24931 25 - 100 7e-06 ACR9-like, ACT-like domain
ACT PF01842 37 - 85 1.5e-07 ACT domain
ACT PF01842 130 - 199 5.4e-10 ACT domain
ACT PF01842 266 - 329 5.3e-06 ACT domain
ACT PF01842 345 - 405 9.9e-10 ACT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1112
AarI CACCTGC 1 cut(s) 1109
Acc36I ACCTGC 1 cut(s) 1109
AccB1I GGYRCC 1 cut(s) 1273
AccB7I CCANNNNNTGG 1 cut(s) 544
AccII CGCG 1 cut(s) 600
AciI CCGC 4 cut(s) 216, 412, 438, 600
AclWI GGATC 3 cut(s) 23, 1078, 1091
AcoI YGGCCR 2 cut(s) 17, 344
AcsI RAATTY 3 cut(s) 141, 1180, 1254
AcuI CTGAAG 3 cut(s) 498, 981, 1158
AfaI GTAC 1 cut(s) 165
AfiI CCNNNNNNNGG 2 cut(s) 115, 544
AgsI TTSAA 4 cut(s) 152, 1205, 1243, 1260
AhlI ACTAGT 1 cut(s) 1292
AjiI CACGTC 1 cut(s) 241
AjnI CCWGG 3 cut(s) 136, 346, 415
AjuI GAANNNNNNNTTGG 2 cut(s) 1298, 1330
AleI CACNNNNGTG 1 cut(s) 656
AluBI AGCT 5 cut(s) 93, 397, 1039, 1208, 1314
AluI AGCT 5 cut(s) 93, 397, 1039, 1208, 1314
Alw21I GWGCWC 1 cut(s) 53
Alw26I GTCTC 7 cut(s) 79, 402, 425, 574, 1129, 1274, 1283
AlwI GGATC 3 cut(s) 23, 1078, 1091
Ama87I CYCGRG 2 cut(s) 32, 67
AoxI GGCC 5 cut(s) 17, 316, 344, 706, 1302
ApeKI GCWGC 3 cut(s) 93, 473, 998
ApoI RAATTY 3 cut(s) 141, 1180, 1254
Asp700I GAANNNNTTC 1 cut(s) 1209
AspS9I GGNCC 5 cut(s) 308, 316, 706, 902, 1302
AsuHPI GGTGA 2 cut(s) 389, 754
AvaI CYCGRG 2 cut(s) 32, 67
AvaII GGWCC 2 cut(s) 308, 902
AxyI CCTNAGG 1 cut(s) 1088
BalI TGGCCA 2 cut(s) 19, 346
BamHI GGATCC 1 cut(s) 1083
BanI GGYRCC 1 cut(s) 1273
BbsI GAAGAC 1 cut(s) 344
Bbv12I GWGCWC 1 cut(s) 53
BbvI GCAGC 3 cut(s) 80, 460, 985
BccI CCATC 8 cut(s) 206, 213, 562, 578, 893, 896, 935, 1293
BceAI ACGGC 2 cut(s) 683, 693
BciT130I CCWGG 3 cut(s) 138, 348, 417
BciVI GTATCC 1 cut(s) 782
BclI TGATCA 2 cut(s) 247, 379
BcoDI GTCTC 7 cut(s) 79, 402, 425, 574, 1129, 1274, 1283
BcuI ACTAGT 1 cut(s) 1292
BfaI CTAG 4 cut(s) 90, 110, 1034, 1293
BfmI CTRYAG 2 cut(s) 94, 372
BfuAI ACCTGC 1 cut(s) 1109
BfuI GTATCC 1 cut(s) 782
BglII AGATCT 1 cut(s) 432
BisI GCNGC 3 cut(s) 94, 474, 999
BlsI GCNGC 3 cut(s) 95, 475, 1000
BmcAI AGTACT 1 cut(s) 165
Bme1390I CCNGG 3 cut(s) 138, 348, 417
Bme18I GGWCC 2 cut(s) 308, 902
BmeT110I CYCGRG 2 cut(s) 32, 67
BmgBI CACGTC 1 cut(s) 241
BmgT120I GGNCC 5 cut(s) 308, 316, 706, 902, 1302
BmiI GGNNCC 3 cut(s) 671, 1085, 1275
BmrFI CCNGG 3 cut(s) 138, 348, 417
BmsI GCATC 1 cut(s) 920
BpiI GAAGAC 1 cut(s) 344
Bpu10I CCTNAGC 1 cut(s) 47
BpuEI CTTGAG 1 cut(s) 569
BsaI GGTCTC 3 cut(s) 79, 402, 425
BsaJI CCNNGG 4 cut(s) 68, 415, 709, 1269
BsaWI WCCGGW 1 cut(s) 807
Bsc4I CCNNNNNNNGG 2 cut(s) 115, 544
Bse1I ACTGG 1 cut(s) 633
Bse21I CCTNAGG 1 cut(s) 1088
BseBI CCWGG 3 cut(s) 138, 348, 417
BseDI CCNNGG 4 cut(s) 68, 415, 709, 1269
BseGI GGATG 6 cut(s) 224, 235, 554, 616, 946, 1304
BseLI CCNNNNNNNGG 2 cut(s) 115, 544
BseMII CTCAG 5 cut(s) 38, 420, 1079, 1269, 1278
BseNI ACTGG 1 cut(s) 633
BseRI GAGGAG 1 cut(s) 196
BseXI GCAGC 3 cut(s) 80, 460, 985
Bsh1236I CGCG 1 cut(s) 600
BshFI GGCC 5 cut(s) 19, 318, 346, 708, 1304
BshNI GGYRCC 1 cut(s) 1273
BsiHKAI GWGCWC 1 cut(s) 53
BsiHKCI CYCGRG 2 cut(s) 32, 67
BsiSI CCGG 1 cut(s) 808
BslI CCNNNNNNNGG 2 cut(s) 115, 544
BsmAI GTCTC 7 cut(s) 79, 402, 425, 574, 1129, 1274, 1283
BsmI GAATGC 1 cut(s) 367
BsnI GGCC 5 cut(s) 19, 318, 346, 708, 1304
Bso31I GGTCTC 3 cut(s) 79, 402, 425
BsoBI CYCGRG 2 cut(s) 32, 67
Bsp1286I GDGCHC 1 cut(s) 53
Bsp143I GATC 7 cut(s) 28, 247, 379, 432, 759, 817, 1083
BspACI CCGC 4 cut(s) 216, 412, 438, 600
BspANI GGCC 5 cut(s) 19, 318, 346, 708, 1304
BspCNI CTCAG 5 cut(s) 39, 421, 1080, 1270, 1279
BspFNI CGCG 1 cut(s) 600
BspLI GGNNCC 3 cut(s) 671, 1085, 1275
BspMAI CTGCAG 1 cut(s) 98
BspMI ACCTGC 1 cut(s) 1109
BspPI GGATC 3 cut(s) 23, 1078, 1091
BspQI GCTCTTC 1 cut(s) 1215
BspT107I GGYRCC 1 cut(s) 1273
BspTNI GGTCTC 3 cut(s) 79, 402, 425
BsrI ACTGG 1 cut(s) 633
BssECI CCNNGG 4 cut(s) 68, 415, 709, 1269
BssMI GATC 7 cut(s) 28, 247, 379, 432, 759, 817, 1083
BssT1I CCWWGG 1 cut(s) 1269
Bst2UI CCWGG 3 cut(s) 138, 348, 417
Bst6I CTCTTC 4 cut(s) 400, 570, 1006, 1215
BstC8I GCNNGC 2 cut(s) 745, 1064
BstDEI CTNAG 6 cut(s) 47, 429, 1028, 1088, 1278, 1287
BstDSI CCRYGG 1 cut(s) 709
BstENI CCTNNNNNAGG 1 cut(s) 113
BstF5I GGATG 6 cut(s) 224, 235, 554, 616, 946, 1304
BstFNI CGCG 1 cut(s) 600
BstKTI GATC 7 cut(s) 31, 250, 382, 435, 762, 820, 1086
BstMAI GTCTC 7 cut(s) 79, 402, 425, 574, 1129, 1274, 1283
BstMBI GATC 7 cut(s) 28, 247, 379, 432, 759, 817, 1083
BstMWI GCNNNNNNNGC 1 cut(s) 446
BstNI CCWGG 3 cut(s) 138, 348, 417
BstNSI RCATGY 1 cut(s) 537
BstSCI CCNGG 3 cut(s) 136, 346, 415
BstSFI CTRYAG 2 cut(s) 94, 372
BstUI CGCG 1 cut(s) 600
BstV1I GCAGC 3 cut(s) 80, 460, 985
BstV2I GAAGAC 1 cut(s) 344
BstX2I RGATCY 2 cut(s) 432, 1083
BstYI RGATCY 2 cut(s) 432, 1083
Bsu36I CCTNAGG 1 cut(s) 1088
BsuI GTATCC 1 cut(s) 782
BsuRI GGCC 5 cut(s) 19, 318, 346, 708, 1304
BtgI CCRYGG 1 cut(s) 709
BtrI CACGTC 1 cut(s) 241
BtsCI GGATG 6 cut(s) 224, 235, 554, 616, 946, 1304
BtsI GCAGTG 1 cut(s) 103
BtsIMutI CAGTG 5 cut(s) 103, 243, 808, 855, 1191
BveI ACCTGC 1 cut(s) 1109
Cac8I GCNNGC 2 cut(s) 745, 1064
Cfr13I GGNCC 5 cut(s) 308, 316, 706, 902, 1302
CseI GACGC 1 cut(s) 1004
Csp6I GTAC 1 cut(s) 164
CviAII CATG 5 cut(s) 226, 534, 656, 881, 937
CviQI GTAC 1 cut(s) 164
DdeI CTNAG 6 cut(s) 47, 429, 1028, 1088, 1278, 1287
DpnI GATC 7 cut(s) 30, 249, 381, 434, 761, 819, 1085
DpnII GATC 7 cut(s) 28, 247, 379, 432, 759, 817, 1083
EaeI YGGCCR 2 cut(s) 17, 344
Eam1104I CTCTTC 4 cut(s) 400, 570, 1006, 1215
EarI CTCTTC 4 cut(s) 400, 570, 1006, 1215
EciI GGCGGA 1 cut(s) 231
Eco130I CCWWGG 1 cut(s) 1269
Eco31I GGTCTC 3 cut(s) 79, 402, 425
Eco47I GGWCC 2 cut(s) 308, 902
Eco57I CTGAAG 3 cut(s) 498, 981, 1158
Eco81I CCTNAGG 1 cut(s) 1088
Eco88I CYCGRG 2 cut(s) 32, 67
EcoNI CCTNNNNNAGG 1 cut(s) 113
EcoRI GAATTC 2 cut(s) 141, 1180
EcoRII CCWGG 3 cut(s) 136, 346, 415
EcoT14I CCWWGG 1 cut(s) 1269
EcoT22I ATGCAT 1 cut(s) 913
ErhI CCWWGG 1 cut(s) 1269
FaeI CATG 5 cut(s) 229, 537, 659, 884, 940
FalI AAGNNNNNCTT 4 cut(s) 578, 610, 1298, 1330
FatI CATG 5 cut(s) 225, 533, 655, 880, 936
FauI CCCGC 1 cut(s) 593
FauNDI CATATG 1 cut(s) 907
FbaI TGATCA 2 cut(s) 247, 379
Fnu4HI GCNGC 3 cut(s) 94, 474, 999
FokI GGATG 6 cut(s) 231, 242, 541, 623, 953, 1311
Fsp4HI GCNGC 3 cut(s) 94, 474, 999
FspBI CTAG 4 cut(s) 90, 110, 1034, 1293
GluI GCNGC 3 cut(s) 94, 474, 999
HaeIII GGCC 5 cut(s) 19, 318, 346, 708, 1304
HapII CCGG 1 cut(s) 808
HgaI GACGC 1 cut(s) 1004
Hin1II CATG 5 cut(s) 229, 537, 659, 884, 940
HindIII AAGCTT 1 cut(s) 1312
HinfI GANTC 3 cut(s) 57, 582, 1169
HpaII CCGG 1 cut(s) 808
HphI GGTGA 2 cut(s) 389, 754
Hpy166II GTNNAC 4 cut(s) 82, 547, 651, 1189
Hpy188I TCNGA 5 cut(s) 211, 430, 898, 1008, 1072
Hpy188III TCNNGA 5 cut(s) 32, 295, 558, 586, 1087
Hpy8I GTNNAC 4 cut(s) 82, 547, 651, 1189
HpyAV CCTTC 3 cut(s) 292, 956, 964
HpyCH4IV ACGT 4 cut(s) 240, 465, 1152, 1245
HpyF10VI GCNNNNNNNGC 1 cut(s) 446
HpyF3I CTNAG 6 cut(s) 47, 429, 1028, 1088, 1278, 1287
HpySE526I ACGT 4 cut(s) 240, 465, 1152, 1245
Hsp92II CATG 5 cut(s) 229, 537, 659, 884, 940
Ksp22I TGATCA 2 cut(s) 247, 379
Kzo9I GATC 7 cut(s) 28, 247, 379, 432, 759, 817, 1083
LguI GCTCTTC 1 cut(s) 1215
LmnI GCTCC 1 cut(s) 675
Lsp1109I GCAGC 3 cut(s) 80, 460, 985
LweI GCATC 1 cut(s) 920
MaeI CTAG 4 cut(s) 90, 110, 1034, 1293
MaeII ACGT 4 cut(s) 240, 465, 1152, 1245
MaeIII GTNAC 5 cut(s) 98, 241, 626, 932, 1075
MalI GATC 7 cut(s) 30, 249, 381, 434, 761, 819, 1085
MboI GATC 7 cut(s) 28, 247, 379, 432, 759, 817, 1083
MflI RGATCY 2 cut(s) 432, 1083
MhlI GDGCHC 1 cut(s) 53
MlsI TGGCCA 2 cut(s) 19, 346
MluCI AATT 7 cut(s) 141, 399, 1002, 1180, 1200, 1221, 1254
MluNI TGGCCA 2 cut(s) 19, 346
MlyI GAGTC 1 cut(s) 576
MmeI TCCRAC 2 cut(s) 340, 775
MnlI CCTC 9 cut(s) 63, 191, 217, 464, 601, 697, 1015, 1083, 1332
Mox20I TGGCCA 2 cut(s) 19, 346
Mph1103I ATGCAT 1 cut(s) 913
MroXI GAANNNNTTC 1 cut(s) 1209
MscI TGGCCA 2 cut(s) 19, 346
MseI TTAA 1 cut(s) 462
MslI CAYNNNNRTG 4 cut(s) 230, 656, 860, 939
Msp20I TGGCCA 2 cut(s) 19, 346
MspA1I CMGCKG 1 cut(s) 440
MspI CCGG 1 cut(s) 808
MspR9I CCNGG 3 cut(s) 138, 348, 417
Mva1269I GAATGC 1 cut(s) 367
MvaI CCWGG 3 cut(s) 138, 348, 417
MvnI CGCG 1 cut(s) 600
MwoI GCNNNNNNNGC 1 cut(s) 446
NdeI CATATG 1 cut(s) 907
NdeII GATC 7 cut(s) 28, 247, 379, 432, 759, 817, 1083
NlaIII CATG 5 cut(s) 229, 537, 659, 884, 940
NlaIV GGNNCC 3 cut(s) 671, 1085, 1275
NmuCI GTSAC 4 cut(s) 98, 241, 626, 932
NsiI ATGCAT 1 cut(s) 913
NspI RCATGY 1 cut(s) 537
OliI CACNNNNGTG 1 cut(s) 656
PaqCI CACCTGC 1 cut(s) 1109
PciSI GCTCTTC 1 cut(s) 1215
PctI GAATGC 1 cut(s) 367
PdmI GAANNNNTTC 1 cut(s) 1209
PfeI GAWTC 2 cut(s) 57, 1169
PflMI CCANNNNNTGG 1 cut(s) 544
PkrI GCNGC 3 cut(s) 95, 475, 1000
PleI GAGTC 1 cut(s) 576
PpsI GAGTC 1 cut(s) 576
PsiI TTATAA 1 cut(s) 1112
Psp6I CCWGG 3 cut(s) 136, 346, 415
PspGI CCWGG 3 cut(s) 136, 346, 415
PspN4I GGNNCC 3 cut(s) 671, 1085, 1275
PspPI GGNCC 5 cut(s) 308, 316, 706, 902, 1302
PstI CTGCAG 1 cut(s) 98
PsuI RGATCY 2 cut(s) 432, 1083
RsaI GTAC 1 cut(s) 165
RsaNI GTAC 1 cut(s) 164
RseI CAYNNNNRTG 4 cut(s) 230, 656, 860, 939
SapI GCTCTTC 1 cut(s) 1215
SaqAI TTAA 1 cut(s) 462
SatI GCNGC 3 cut(s) 94, 474, 999
Sau3AI GATC 7 cut(s) 28, 247, 379, 432, 759, 817, 1083
Sau96I GGNCC 5 cut(s) 308, 316, 706, 902, 1302
ScaI AGTACT 1 cut(s) 165
SchI GAGTC 1 cut(s) 576
ScrFI CCNGG 3 cut(s) 138, 348, 417
SduI GDGCHC 1 cut(s) 53
SfaNI GCATC 1 cut(s) 920
SfcI CTRYAG 2 cut(s) 94, 372
SinI GGWCC 2 cut(s) 308, 902
SmiMI CAYNNNNRTG 4 cut(s) 230, 656, 860, 939
SmlI CTYRAG 1 cut(s) 584
SmoI CTYRAG 1 cut(s) 584
SpeI ACTAGT 1 cut(s) 1292
Sse9I AATT 7 cut(s) 141, 399, 1002, 1180, 1200, 1221, 1254
SsiI CCGC 4 cut(s) 216, 412, 438, 600
SspMI CTAG 4 cut(s) 90, 110, 1034, 1293
StyD4I CCNGG 3 cut(s) 136, 346, 415
StyI CCWWGG 1 cut(s) 1269
TaiI ACGT 4 cut(s) 243, 468, 1155, 1248
TaqI TCGA 2 cut(s) 294, 573
TasI AATT 7 cut(s) 141, 399, 1002, 1180, 1200, 1221, 1254
TatI WGTACW 1 cut(s) 163
TfiI GAWTC 2 cut(s) 57, 1169
Tru1I TTAA 1 cut(s) 462
Tru9I TTAA 1 cut(s) 462
TscAI CASTG 5 cut(s) 103, 250, 808, 862, 1191
TseFI GTSAC 4 cut(s) 98, 241, 626, 932
TseI GCWGC 3 cut(s) 93, 473, 998
Tsp45I GTSAC 4 cut(s) 98, 241, 626, 932
TspDTI ATGAA 2 cut(s) 214, 1163
TspRI CASTG 5 cut(s) 103, 250, 808, 862, 1191
Van91I CCANNNNNTGG 1 cut(s) 544
VpaK11BI GGWCC 2 cut(s) 308, 902
XagI CCTNNNNNAGG 1 cut(s) 113
XapI RAATTY 3 cut(s) 141, 1180, 1254
XceI RCATGY 1 cut(s) 537
XcmI CCANNNNNNNNNTGG 1 cut(s) 640
XmnI GAANNNNTTC 1 cut(s) 1209
XspI CTAG 4 cut(s) 90, 110, 1034, 1293
ZrmI AGTACT 1 cut(s) 165
Zsp2I ATGCAT 1 cut(s) 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.