Rh6BG345700

Aldo-keto reductase-like isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0006387
Physical Location & Seq
Forward (+)
57727733 .. 57731125
3393 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG345700.1

Sequence Viewer

Length: 882 bp
ATGGCGGTGCCGGTCTTCAACCTCGCTCCGAATCTGATGGTTTCAAGGCTGTGCTTGGGAACCATGACTTTCGGCGAGCAAAACACGCTGCCGGAGTCCTTTCGCCTCCTCGACCAAGCTTTCAACTCCGGAATCAACTTCTTCGACTCTGCGGAGATGTACCCGGTGGTTCAGCGAGCCCAGACTCAGGGCAGGAGCGAGGAGTATCTCGGCCGTTGGATTAGAGAGCGCAACATTCCTCGAGACAGCGTCGTTTTGGCCACCAAGGTGACCGGACCATCTGGGCAGATGACTTGGATAAGAGATGGCCCGAAGTGTTTGGATGCTGCGAATATCACTGAGGCCATTGACAGCAGTTTACGGCGATTGCAGACAGATTACATTGATCTTTATCAGATACACTGGCCTGATCGATATGTTCCGATGTTTGGAGAAACTGAATATGATCCAACCAGGCAATTTGGTTCGATTCCTATAGAGGAACAACTTGATGCTCTTGGGAGAGCTGTTGATTCTGGTAAGGTCAGATATGTTGGTCTCAGTAATGAAACGGCATATGGTGTGATGAAGTTTCTTCAGGTGGCTGAAAGAGGCACTCACCTTCCAAAGATTGTATCTGTGCAGAACTCATACAGCTTGCTATGTCGAACTTTTGATTCTGGATTGGCTGAATGCTGTCATCATGAGAGGGTCAGTTTATTAGCTTACAGCCCTCTTGCAATGGGTATACTCTCTGGGAAGTATTTTTCACCGGAAGGCGGTCCTTCAGATGCTCGGTTGAACCTTTTCAGAGGAAAGTATTCAGAAGGGGAGTCCAGATACAACTTGTCTAATCCCTCCATAAGGGCAGCAAGCATGGTACATGGTACACAGGCACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

293

Amino Acids

32.75

Weight (kDa)

6.0

Isoelectric Point (pI)

45.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 16 - 254 1.8e-56 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 7
AccI GTMKAC 1 cut(s) 727
AccIII TCCGGA 1 cut(s) 128
AciI CCGC 3 cut(s) 5, 152, 759
AclWI GGATC 1 cut(s) 440
AcoI YGGCCR 2 cut(s) 211, 258
AcuI CTGAAG 2 cut(s) 560, 750
AfaI GTAC 3 cut(s) 161, 861, 868
AfiI CCNNNNNNNGG 4 cut(s) 187, 428, 758, 843
AgsI TTSAA 4 cut(s) 19, 45, 124, 781
AjnI CCWGG 1 cut(s) 452
AleI CACNNNNGTG 1 cut(s) 266
AluBI AGCT 4 cut(s) 119, 506, 636, 704
AluI AGCT 4 cut(s) 119, 506, 636, 704
Alw26I GTCTC 2 cut(s) 237, 542
AlwI GGATC 1 cut(s) 440
AlwNI CAGNNNCTG 1 cut(s) 877
Ama87I CYCGRG 1 cut(s) 240
Aor13HI TCCGGA 1 cut(s) 128
AoxI GGCC 5 cut(s) 211, 258, 307, 342, 404
ApeKI GCWGC 3 cut(s) 88, 326, 848
Asp700I GAANNNNTTC 2 cut(s) 785, 799
AspLEI GCGC 1 cut(s) 231
AspS9I GGNCC 3 cut(s) 275, 308, 761
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 3 cut(s) 280, 590, 741
AvaI CYCGRG 1 cut(s) 240
AvaII GGWCC 2 cut(s) 275, 761
BalI TGGCCA 1 cut(s) 260
BanI GGYRCC 1 cut(s) 7
BanII GRGCYC 1 cut(s) 181
BbsI GAAGAC 1 cut(s) 7
BbvI GCAGC 3 cut(s) 75, 313, 860
BccI CCATC 3 cut(s) 31, 286, 299
BceAI ACGGC 3 cut(s) 198, 377, 567
BciT130I CCWGG 1 cut(s) 454
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 2 cut(s) 237, 542
BfmI CTRYAG 1 cut(s) 474
BisI GCNGC 3 cut(s) 89, 327, 849
BlsI GCNGC 3 cut(s) 90, 328, 850
Bme1390I CCNGG 2 cut(s) 164, 454
Bme18I GGWCC 2 cut(s) 275, 761
BmeT110I CYCGRG 1 cut(s) 240
BmgT120I GGNCC 3 cut(s) 275, 308, 761
BmiI GGNNCC 2 cut(s) 9, 61
BmrFI CCNGG 2 cut(s) 164, 454
BmsI GCATC 3 cut(s) 313, 481, 760
BpiI GAAGAC 1 cut(s) 7
BpuMI CCSGG 1 cut(s) 164
Bsa29I ATCGAT 1 cut(s) 412
BsaBI GATNNNNATC 1 cut(s) 390
BsaI GGTCTC 1 cut(s) 542
BsaJI CCNNGG 1 cut(s) 264
BsaWI WCCGGW 3 cut(s) 128, 272, 751
Bsc4I CCNNNNNNNGG 4 cut(s) 187, 428, 758, 843
Bse118I RCCGGY 1 cut(s) 10
Bse1I ACTGG 1 cut(s) 407
Bse3DI GCAATG 1 cut(s) 726
Bse8I GATNNNNATC 1 cut(s) 390
BseAI TCCGGA 1 cut(s) 128
BseBI CCWGG 1 cut(s) 454
BseCI ATCGAT 1 cut(s) 412
BseDI CCNNGG 1 cut(s) 264
BseGI GGATG 1 cut(s) 328
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 4 cut(s) 187, 428, 758, 843
BseMI GCAATG 1 cut(s) 726
BseMII CTCAG 3 cut(s) 200, 330, 553
BseNI ACTGG 1 cut(s) 407
BseRI GAGGAG 2 cut(s) 98, 215
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 3 cut(s) 75, 313, 860
BsgI GTGCAG 1 cut(s) 641
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 5 cut(s) 213, 260, 309, 344, 406
BshNI GGYRCC 1 cut(s) 7
BshVI ATCGAT 1 cut(s) 412
BsiEI CGRYCG 1 cut(s) 214
BsiHKCI CYCGRG 1 cut(s) 240
BsiSI CCGG 6 cut(s) 11, 92, 129, 164, 273, 752
BslI CCNNNNNNNGG 4 cut(s) 187, 428, 758, 843
BsmAI GTCTC 2 cut(s) 237, 542
BsmI GAATGC 1 cut(s) 677
BsnI GGCC 5 cut(s) 213, 260, 309, 344, 406
Bso31I GGTCTC 1 cut(s) 542
BsoBI CYCGRG 1 cut(s) 240
Bsp1286I GDGCHC 1 cut(s) 181
Bsp13I TCCGGA 1 cut(s) 128
Bsp143I GATC 3 cut(s) 385, 409, 445
BspACI CCGC 3 cut(s) 5, 152, 759
BspANI GGCC 5 cut(s) 213, 260, 309, 344, 406
BspCNI CTCAG 3 cut(s) 199, 331, 552
BspDI ATCGAT 1 cut(s) 412
BspEI TCCGGA 1 cut(s) 128
BspHI TCATGA 1 cut(s) 682
BspLI GGNNCC 2 cut(s) 9, 61
BspPI GGATC 1 cut(s) 440
BspT107I GGYRCC 1 cut(s) 7
BspTNI GGTCTC 1 cut(s) 542
BsrDI GCAATG 1 cut(s) 726
BsrFI RCCGGY 1 cut(s) 10
BsrI ACTGG 1 cut(s) 407
BssAI RCCGGY 1 cut(s) 10
BssECI CCNNGG 1 cut(s) 264
BssMI GATC 3 cut(s) 385, 409, 445
BssNAI GTATAC 1 cut(s) 728
BssT1I CCWWGG 1 cut(s) 264
Bst1107I GTATAC 1 cut(s) 728
Bst2UI CCWGG 1 cut(s) 454
Bst4CI ACNGT 1 cut(s) 879
BstC8I GCNNGC 4 cut(s) 77, 177, 638, 853
BstDEI CTNAG 3 cut(s) 186, 339, 539
BstEII GGTNACC 1 cut(s) 268
BstENI CCTNNNNNAGG 1 cut(s) 841
BstF5I GGATG 1 cut(s) 328
BstHHI GCGC 1 cut(s) 231
BstKTI GATC 3 cut(s) 388, 412, 448
BstMAI GTCTC 2 cut(s) 237, 542
BstMBI GATC 3 cut(s) 385, 409, 445
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 1 cut(s) 85
BstNI CCWGG 1 cut(s) 454
BstPI GGTNACC 1 cut(s) 268
BstSCI CCNGG 2 cut(s) 162, 452
BstSFI CTRYAG 1 cut(s) 474
BstV1I GCAGC 3 cut(s) 75, 313, 860
BstV2I GAAGAC 1 cut(s) 7
BstZ17I GTATAC 1 cut(s) 728
BstZI CGGCCG 1 cut(s) 211
Bsu15I ATCGAT 1 cut(s) 412
BsuRI GGCC 5 cut(s) 213, 260, 309, 344, 406
BsuTUI ATCGAT 1 cut(s) 412
BtsCI GGATG 1 cut(s) 328
BtsIMutI CAGTG 3 cut(s) 336, 400, 875
Cac8I GCNNGC 4 cut(s) 77, 177, 638, 853
CaiI CAGNNNCTG 1 cut(s) 877
CciI TCATGA 1 cut(s) 682
CfoI GCGC 1 cut(s) 231
Cfr10I RCCGGY 1 cut(s) 10
Cfr13I GGNCC 3 cut(s) 275, 308, 761
ClaI ATCGAT 1 cut(s) 412
CseI GACGC 1 cut(s) 238
Csp6I GTAC 3 cut(s) 160, 860, 867
CviAII CATG 4 cut(s) 64, 683, 856, 863
CviQI GTAC 3 cut(s) 160, 860, 867
DdeI CTNAG 3 cut(s) 186, 339, 539
DpnI GATC 3 cut(s) 387, 411, 447
DpnII GATC 3 cut(s) 385, 409, 445
EaeI YGGCCR 2 cut(s) 211, 258
EagI CGGCCG 1 cut(s) 211
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 264
Eco24I GRGCYC 1 cut(s) 181
Eco31I GGTCTC 1 cut(s) 542
Eco47I GGWCC 2 cut(s) 275, 761
Eco52I CGGCCG 1 cut(s) 211
Eco57I CTGAAG 2 cut(s) 560, 750
Eco88I CYCGRG 1 cut(s) 240
Eco91I GGTNACC 1 cut(s) 268
EcoNI CCTNNNNNAGG 1 cut(s) 841
EcoO65I GGTNACC 1 cut(s) 268
EcoRII CCWGG 1 cut(s) 452
EcoT14I CCWWGG 1 cut(s) 264
EcoT38I GRGCYC 1 cut(s) 181
ErhI CCWWGG 1 cut(s) 264
FaeI CATG 4 cut(s) 67, 686, 859, 866
FatI CATG 4 cut(s) 63, 682, 855, 862
FauNDI CATATG 1 cut(s) 556
FblI GTMKAC 1 cut(s) 727
Fnu4HI GCNGC 3 cut(s) 89, 327, 849
FokI GGATG 1 cut(s) 335
FriOI GRGCYC 1 cut(s) 181
Fsp4HI GCNGC 3 cut(s) 89, 327, 849
GlaI GCGC 1 cut(s) 230
GluI GCNGC 3 cut(s) 89, 327, 849
HaeIII GGCC 5 cut(s) 213, 260, 309, 344, 406
HapII CCGG 6 cut(s) 11, 92, 129, 164, 273, 752
HgaI GACGC 1 cut(s) 238
HhaI GCGC 1 cut(s) 231
Hin1II CATG 4 cut(s) 67, 686, 859, 866
Hin6I GCGC 1 cut(s) 229
HinP1I GCGC 1 cut(s) 229
HindIII AAGCTT 1 cut(s) 117
HinfI GANTC 9 cut(s) 31, 95, 132, 146, 184, 469, 512, 656, 812
HpaII CCGG 6 cut(s) 11, 92, 129, 164, 273, 752
HphI GGTGA 3 cut(s) 280, 590, 741
Hpy166II GTNNAC 3 cut(s) 359, 728, 869
Hpy188I TCNGA 8 cut(s) 30, 36, 396, 423, 527, 769, 791, 805
Hpy188III TCNNGA 5 cut(s) 129, 242, 660, 683, 816
Hpy8I GTNNAC 3 cut(s) 359, 728, 869
Hpy99I CGWCG 1 cut(s) 254
HpyAV CCTTC 4 cut(s) 611, 749, 774, 800
HpyCH4III ACNGT 1 cut(s) 879
HpyCH4V TGCA 3 cut(s) 370, 622, 719
HpyF10VI GCNNNNNNNGC 1 cut(s) 85
HpyF3I CTNAG 3 cut(s) 186, 339, 539
Hsp92II CATG 4 cut(s) 67, 686, 859, 866
HspAI GCGC 1 cut(s) 229
Kpn2I TCCGGA 1 cut(s) 128
Kzo9I GATC 3 cut(s) 385, 409, 445
LmnI GCTCC 2 cut(s) 31, 195
Lsp1109I GCAGC 3 cut(s) 75, 313, 860
LweI GCATC 3 cut(s) 313, 481, 760
MaeIII GTNAC 1 cut(s) 268
MalI GATC 3 cut(s) 387, 411, 447
MboI GATC 3 cut(s) 385, 409, 445
MboII GAAGA 3 cut(s) 7, 133, 566
MhlI GDGCHC 1 cut(s) 181
MlsI TGGCCA 1 cut(s) 260
MluCI AATT 1 cut(s) 458
MluNI TGGCCA 1 cut(s) 260
MlyI GAGTC 4 cut(s) 104, 140, 178, 821
MmeI TCCRAC 2 cut(s) 197, 473
Mox20I TGGCCA 1 cut(s) 260
MroI TCCGGA 1 cut(s) 128
MroXI GAANNNNTTC 2 cut(s) 785, 799
MscI TGGCCA 1 cut(s) 260
MslI CAYNNNNRTG 1 cut(s) 266
Msp20I TGGCCA 1 cut(s) 260
MspI CCGG 6 cut(s) 11, 92, 129, 164, 273, 752
MspR9I CCNGG 2 cut(s) 164, 454
Mva1269I GAATGC 1 cut(s) 677
MvaI CCWGG 1 cut(s) 454
MwoI GCNNNNNNNGC 1 cut(s) 85
NciI CCSGG 1 cut(s) 164
NdeI CATATG 1 cut(s) 556
NdeII GATC 3 cut(s) 385, 409, 445
NlaIII CATG 4 cut(s) 67, 686, 859, 866
NlaIV GGNNCC 2 cut(s) 9, 61
NmeAIII GCCGAG 1 cut(s) 189
NmuCI GTSAC 1 cut(s) 268
OliI CACNNNNGTG 1 cut(s) 266
PaeR7I CTCGAG 1 cut(s) 240
PagI TCATGA 1 cut(s) 682
PctI GAATGC 1 cut(s) 677
PdmI GAANNNNTTC 2 cut(s) 785, 799
PfeI GAWTC 5 cut(s) 31, 132, 469, 512, 656
PflFI GACNNNGTC 1 cut(s) 248
PkrI GCNGC 3 cut(s) 90, 328, 850
PleI GAGTC 4 cut(s) 103, 140, 178, 820
PpsI GAGTC 4 cut(s) 103, 140, 178, 820
Psp6I CCWGG 1 cut(s) 452
PspEI GGTNACC 1 cut(s) 268
PspGI CCWGG 1 cut(s) 452
PspN4I GGNNCC 2 cut(s) 9, 61
PspPI GGNCC 3 cut(s) 275, 308, 761
PstNI CAGNNNCTG 1 cut(s) 877
PsyI GACNNNGTC 1 cut(s) 248
RsaI GTAC 3 cut(s) 161, 861, 868
RsaNI GTAC 3 cut(s) 160, 860, 867
RseI CAYNNNNRTG 1 cut(s) 266
SatI GCNGC 3 cut(s) 89, 327, 849
Sau3AI GATC 3 cut(s) 385, 409, 445
Sau96I GGNCC 3 cut(s) 275, 308, 761
SchI GAGTC 4 cut(s) 104, 140, 178, 821
ScrFI CCNGG 2 cut(s) 164, 454
SduI GDGCHC 1 cut(s) 181
SfaNI GCATC 3 cut(s) 313, 481, 760
SfcI CTRYAG 1 cut(s) 474
Sfr274I CTCGAG 1 cut(s) 240
SinI GGWCC 2 cut(s) 275, 761
SlaI CTCGAG 1 cut(s) 240
SmiMI CAYNNNNRTG 1 cut(s) 266
SmlI CTYRAG 1 cut(s) 240
SmoI CTYRAG 1 cut(s) 240
Sse9I AATT 1 cut(s) 458
SsiI CCGC 3 cut(s) 5, 152, 759
StyD4I CCNGG 2 cut(s) 162, 452
StyI CCWWGG 1 cut(s) 264
TaaI ACNGT 1 cut(s) 879
TaqI TCGA 6 cut(s) 111, 144, 241, 412, 467, 646
TasI AATT 1 cut(s) 458
TfiI GAWTC 5 cut(s) 31, 132, 469, 512, 656
TscAI CASTG 3 cut(s) 343, 407, 882
TseFI GTSAC 1 cut(s) 268
TseI GCWGC 3 cut(s) 88, 326, 848
Tsp45I GTSAC 1 cut(s) 268
TspDTI ATGAA 2 cut(s) 561, 581
TspRI CASTG 3 cut(s) 343, 407, 882
Tth111I GACNNNGTC 1 cut(s) 248
VpaK11BI GGWCC 2 cut(s) 275, 761
XagI CCTNNNNNAGG 1 cut(s) 841
XhoI CTCGAG 1 cut(s) 240
XmiI GTMKAC 1 cut(s) 727
XmnI GAANNNNTTC 2 cut(s) 785, 799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.