Rw6G029470

Aldo-keto reductase-like isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0006387
Physical Location & Seq
Forward (+)
53578597 .. 53581416
2820 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G029470.1

Sequence Viewer

Length: 1101 bp
ATGGCGGTGCCGGTCTTCAACCTCGCTCCGAATCTGATGGTTTCAAGGCTGTGCCTGGGAACCATGACTTTCGGCGAGCAGAACACGCTGCCGGAGTCCTTTCGCCTCCTCGACCAAGCTTTCAACGCTGGAATCAACTTGTTCGACTCTGCGGAGATGTACCCGGTGGTTCAGCGAGCCCAGACTCAGGGCAGGAGCGAGGAGTATCTCGGCCGTTGGATTAGAGAGCGCAACATTCCTCGAGACAGCGTCGTTTTGGCCACCAAGGTGACCGGACCATCCGGGCAGATGACTTGGATAAGAGATGGCCCCAAGTGTTTGGATGCTGCGAATATTACTGAGGCCATTGACAGCAGTGTTGAGCTATGCATTGGTTTCGTGCAGTCTACGGAGATTGCAGACGGATACATTGATCTTTATCAGATACACTGGCCTGATCGATATGTTCCGATGTTTGGAGAAACTGAATATGATCCAACCAGGCAATTTGGTTCGATTCCTATAGAGGAACAACTTGACGCTCTTGGGAGAGCTGTTGATTCCGGTAAGGTCAGATATGTTGGTCTCAGTAATGAAACGGCATATGGTGTGATGAAGTTTCTTCAGGTGGCTGAAAGAGGCACTCACCTTCCAAAGATTGTATCTGTGCAGAACTCATACAGCTTGCTATGTCGAACTTTTGATTCTGGATTGGCTGAATGCTGTCATCATGAGAGGGTCAGTTTATTAGCTTACAGCCCTCTTGCAATGGGTATACTCTCTGGGAAGTATTTTTCACCTGAAGGCGGTCCTTCAGATGCTCGGTTGAACATTTTCAGAGGAAAGTATTCAGAAGGGGAGTCCAGATACAACTTGTCTAATCCCTCCATAAGGGCAGCAAGCATGGAATACATTCATATTGCAGAAAAGTACGGCCTTCATCCAGTATCTCTTGCAATTGCCTTTGTTTTGAGTCACCCTCTGGTAGCGAGTATCGTCTTTGGAGCAACCCAGTCATGGCAACTTCAGGAAGTTCTTGATGCATGCAAGGTGGAGCTCACATCCGAAGTAATGGTAGAAGTCAACAAGGTTCACCAAAGATTTCCTAACCCTTGTCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

366

Amino Acids

40.69

Weight (kDa)

5.36

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 16 - 357 4.4e-61 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 7
AccI GTMKAC 2 cut(s) 386, 754
AciI CCGC 3 cut(s) 5, 152, 786
AclWI GGATC 1 cut(s) 467
AcoI YGGCCR 2 cut(s) 211, 258
AcuI CTGAAG 4 cut(s) 587, 777, 801, 989
AfaI GTAC 2 cut(s) 161, 911
AfiI CCNNNNNNNGG 5 cut(s) 187, 455, 785, 870, 996
AgsI TTSAA 4 cut(s) 19, 45, 124, 808
AjnI CCWGG 2 cut(s) 54, 479
AleI CACNNNNGTG 1 cut(s) 266
AluBI AGCT 6 cut(s) 119, 364, 533, 663, 731, 1036
AluI AGCT 6 cut(s) 119, 364, 533, 663, 731, 1036
Alw21I GWGCWC 1 cut(s) 1038
Alw26I GTCTC 2 cut(s) 237, 569
AlwI GGATC 1 cut(s) 467
Ama87I CYCGRG 1 cut(s) 240
AoxI GGCC 6 cut(s) 211, 258, 307, 342, 431, 913
ApeKI GCWGC 3 cut(s) 88, 326, 875
Asp700I GAANNNNTTC 3 cut(s) 812, 826, 891
AspLEI GCGC 1 cut(s) 231
AspS9I GGNCC 3 cut(s) 275, 308, 788
AsuC2I CCSGG 2 cut(s) 164, 283
AsuHPI GGTGA 5 cut(s) 280, 617, 768, 947, 1064
AvaI CYCGRG 1 cut(s) 240
AvaII GGWCC 2 cut(s) 275, 788
BalI TGGCCA 1 cut(s) 260
BanI GGYRCC 1 cut(s) 7
BanII GRGCYC 2 cut(s) 181, 1038
BbsI GAAGAC 1 cut(s) 7
Bbv12I GWGCWC 1 cut(s) 1038
BbvI GCAGC 3 cut(s) 75, 313, 887
BccI CCATC 3 cut(s) 31, 286, 299
BceAI ACGGC 3 cut(s) 198, 594, 928
BcgI CGANNNNNNTGC 2 cut(s) 358, 392
BciT130I CCWGG 2 cut(s) 56, 481
BciVI GTATCC 1 cut(s) 398
BcnI CCSGG 2 cut(s) 164, 283
BcoDI GTCTC 2 cut(s) 237, 569
BfmI CTRYAG 1 cut(s) 501
BfuI GTATCC 1 cut(s) 398
BisI GCNGC 3 cut(s) 89, 327, 876
BlsI GCNGC 3 cut(s) 90, 328, 877
Bme1390I CCNGG 4 cut(s) 56, 164, 283, 481
Bme18I GGWCC 2 cut(s) 275, 788
BmeT110I CYCGRG 1 cut(s) 240
BmgT120I GGNCC 3 cut(s) 275, 308, 788
BmiI GGNNCC 3 cut(s) 9, 61, 310
BmrFI CCNGG 4 cut(s) 56, 164, 283, 481
BmrI ACTGGG 1 cut(s) 985
BmsI GCATC 3 cut(s) 313, 787, 1009
BmuI ACTGGG 1 cut(s) 985
BpiI GAAGAC 1 cut(s) 7
BplI GAGNNNNNCTC 2 cut(s) 943, 975
BpuMI CCSGG 2 cut(s) 164, 283
Bsa29I ATCGAT 1 cut(s) 439
BsaBI GATNNNNATC 1 cut(s) 417
BsaI GGTCTC 1 cut(s) 569
BsaJI CCNNGG 2 cut(s) 55, 264
BsaWI WCCGGW 2 cut(s) 272, 542
Bsc4I CCNNNNNNNGG 5 cut(s) 187, 455, 785, 870, 996
Bse118I RCCGGY 1 cut(s) 10
Bse1I ACTGG 3 cut(s) 434, 923, 991
Bse3DI GCAATG 1 cut(s) 753
Bse8I GATNNNNATC 1 cut(s) 417
BseBI CCWGG 2 cut(s) 56, 481
BseCI ATCGAT 1 cut(s) 439
BseDI CCNNGG 2 cut(s) 55, 264
BseGI GGATG 4 cut(s) 278, 328, 919, 1040
BseJI GATNNNNATC 1 cut(s) 417
BseLI CCNNNNNNNGG 5 cut(s) 187, 455, 785, 870, 996
BseMI GCAATG 1 cut(s) 753
BseMII CTCAG 3 cut(s) 200, 330, 580
BseNI ACTGG 3 cut(s) 434, 923, 991
BseRI GAGGAG 2 cut(s) 98, 215
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 3 cut(s) 75, 313, 887
BsgI GTGCAG 2 cut(s) 401, 668
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 6 cut(s) 213, 260, 309, 344, 433, 915
BshNI GGYRCC 1 cut(s) 7
BshVI ATCGAT 1 cut(s) 439
BsiEI CGRYCG 1 cut(s) 214
BsiHKAI GWGCWC 1 cut(s) 1038
BsiHKCI CYCGRG 1 cut(s) 240
BsiSI CCGG 6 cut(s) 11, 92, 164, 273, 282, 543
BslFI GGGAC 1 cut(s) 1080
BslI CCNNNNNNNGG 5 cut(s) 187, 455, 785, 870, 996
BsmAI GTCTC 2 cut(s) 237, 569
BsmFI GGGAC 1 cut(s) 1080
BsmI GAATGC 1 cut(s) 704
BsnI GGCC 6 cut(s) 213, 260, 309, 344, 433, 915
Bso31I GGTCTC 1 cut(s) 569
BsoBI CYCGRG 1 cut(s) 240
Bsp1286I GDGCHC 2 cut(s) 181, 1038
Bsp143I GATC 3 cut(s) 412, 436, 472
BspACI CCGC 3 cut(s) 5, 152, 786
BspANI GGCC 6 cut(s) 213, 260, 309, 344, 433, 915
BspCNI CTCAG 3 cut(s) 199, 331, 579
BspDI ATCGAT 1 cut(s) 439
BspHI TCATGA 1 cut(s) 709
BspLI GGNNCC 3 cut(s) 9, 61, 310
BspPI GGATC 1 cut(s) 467
BspT107I GGYRCC 1 cut(s) 7
BspTNI GGTCTC 1 cut(s) 569
BsrDI GCAATG 1 cut(s) 753
BsrFI RCCGGY 1 cut(s) 10
BsrI ACTGG 3 cut(s) 434, 923, 991
BssAI RCCGGY 1 cut(s) 10
BssECI CCNNGG 2 cut(s) 55, 264
BssMI GATC 3 cut(s) 412, 436, 472
BssNAI GTATAC 1 cut(s) 755
BssT1I CCWWGG 1 cut(s) 264
Bst1107I GTATAC 1 cut(s) 755
Bst2UI CCWGG 2 cut(s) 56, 481
BstC8I GCNNGC 5 cut(s) 77, 177, 665, 880, 1024
BstDEI CTNAG 3 cut(s) 186, 339, 566
BstEII GGTNACC 1 cut(s) 268
BstENI CCTNNNNNAGG 1 cut(s) 868
BstF5I GGATG 4 cut(s) 278, 328, 919, 1040
BstHHI GCGC 1 cut(s) 231
BstKTI GATC 3 cut(s) 415, 439, 475
BstMAI GTCTC 2 cut(s) 237, 569
BstMBI GATC 3 cut(s) 412, 436, 472
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 2 cut(s) 85, 125
BstNI CCWGG 2 cut(s) 56, 481
BstNSI RCATGY 1 cut(s) 1026
BstPI GGTNACC 1 cut(s) 268
BstSCI CCNGG 4 cut(s) 54, 162, 281, 479
BstSFI CTRYAG 1 cut(s) 501
BstV1I GCAGC 3 cut(s) 75, 313, 887
BstV2I GAAGAC 1 cut(s) 7
BstXI CCANNNNNNTGG 1 cut(s) 319
BstZ17I GTATAC 1 cut(s) 755
BstZI CGGCCG 1 cut(s) 211
Bsu15I ATCGAT 1 cut(s) 439
BsuI GTATCC 1 cut(s) 398
BsuRI GGCC 6 cut(s) 213, 260, 309, 344, 433, 915
BsuTUI ATCGAT 1 cut(s) 439
BtsCI GGATG 4 cut(s) 278, 328, 919, 1040
BtsI GCAGTG 1 cut(s) 361
BtsIMutI CAGTG 2 cut(s) 361, 427
Cac8I GCNNGC 5 cut(s) 77, 177, 665, 880, 1024
CciI TCATGA 1 cut(s) 709
CfoI GCGC 1 cut(s) 231
Cfr10I RCCGGY 1 cut(s) 10
Cfr13I GGNCC 3 cut(s) 275, 308, 788
ClaI ATCGAT 1 cut(s) 439
CseI GACGC 2 cut(s) 238, 527
Csp6I GTAC 2 cut(s) 160, 910
CviAII CATG 5 cut(s) 64, 710, 883, 996, 1023
CviQI GTAC 2 cut(s) 160, 910
DdeI CTNAG 3 cut(s) 186, 339, 566
DpnI GATC 3 cut(s) 414, 438, 474
DpnII GATC 3 cut(s) 412, 436, 472
EaeI YGGCCR 2 cut(s) 211, 258
EagI CGGCCG 1 cut(s) 211
Ecl136II GAGCTC 1 cut(s) 1036
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 264
Eco24I GRGCYC 2 cut(s) 181, 1038
Eco31I GGTCTC 1 cut(s) 569
Eco47I GGWCC 2 cut(s) 275, 788
Eco52I CGGCCG 1 cut(s) 211
Eco53kI GAGCTC 1 cut(s) 1036
Eco57I CTGAAG 4 cut(s) 587, 777, 801, 989
Eco88I CYCGRG 1 cut(s) 240
Eco91I GGTNACC 1 cut(s) 268
EcoICRI GAGCTC 1 cut(s) 1036
EcoNI CCTNNNNNAGG 1 cut(s) 868
EcoO65I GGTNACC 1 cut(s) 268
EcoRII CCWGG 2 cut(s) 54, 479
EcoT14I CCWWGG 1 cut(s) 264
EcoT22I ATGCAT 2 cut(s) 371, 1024
EcoT38I GRGCYC 2 cut(s) 181, 1038
ErhI CCWWGG 1 cut(s) 264
FaeI CATG 5 cut(s) 67, 713, 886, 999, 1026
FaqI GGGAC 1 cut(s) 1080
FatI CATG 5 cut(s) 63, 709, 882, 995, 1022
FauNDI CATATG 1 cut(s) 583
FblI GTMKAC 2 cut(s) 386, 754
Fnu4HI GCNGC 3 cut(s) 89, 327, 876
FokI GGATG 4 cut(s) 265, 335, 906, 1027
FriOI GRGCYC 2 cut(s) 181, 1038
Fsp4HI GCNGC 3 cut(s) 89, 327, 876
GlaI GCGC 1 cut(s) 230
GluI GCNGC 3 cut(s) 89, 327, 876
HaeIII GGCC 6 cut(s) 213, 260, 309, 344, 433, 915
HapII CCGG 6 cut(s) 11, 92, 164, 273, 282, 543
HgaI GACGC 2 cut(s) 238, 527
HhaI GCGC 1 cut(s) 231
Hin1II CATG 5 cut(s) 67, 713, 886, 999, 1026
Hin6I GCGC 1 cut(s) 229
HinP1I GCGC 1 cut(s) 229
HincII GTYRAC 1 cut(s) 1063
HindII GTYRAC 1 cut(s) 1063
HindIII AAGCTT 1 cut(s) 117
HpaII CCGG 6 cut(s) 11, 92, 164, 273, 282, 543
HphI GGTGA 5 cut(s) 280, 617, 768, 947, 1064
Hpy166II GTNNAC 4 cut(s) 387, 755, 1063, 1072
Hpy188I TCNGA 9 cut(s) 30, 36, 423, 450, 554, 796, 818, 832, 1045
Hpy188III TCNNGA 6 cut(s) 242, 687, 710, 843, 1007, 1016
Hpy8I GTNNAC 4 cut(s) 387, 755, 1063, 1072
Hpy99I CGWCG 1 cut(s) 254
HpyAV CCTTC 5 cut(s) 638, 776, 801, 827, 926
HpyCH4V TGCA 9 cut(s) 369, 382, 398, 649, 746, 902, 935, 1022, 1026
HpyF10VI GCNNNNNNNGC 2 cut(s) 85, 125
HpyF3I CTNAG 3 cut(s) 186, 339, 566
Hsp92II CATG 5 cut(s) 67, 713, 886, 999, 1026
HspAI GCGC 1 cut(s) 229
Kzo9I GATC 3 cut(s) 412, 436, 472
LmnI GCTCC 4 cut(s) 31, 195, 983, 1033
Lsp1109I GCAGC 3 cut(s) 75, 313, 887
LweI GCATC 3 cut(s) 313, 787, 1009
MaeIII GTNAC 2 cut(s) 268, 953
MalI GATC 3 cut(s) 414, 438, 474
MboI GATC 3 cut(s) 412, 436, 472
MboII GAAGA 2 cut(s) 7, 593
MfeI CAATTG 1 cut(s) 936
MhlI GDGCHC 2 cut(s) 181, 1038
MlsI TGGCCA 1 cut(s) 260
MluCI AATT 2 cut(s) 485, 936
MluNI TGGCCA 1 cut(s) 260
MlyI GAGTC 5 cut(s) 104, 140, 178, 848, 961
MmeI TCCRAC 2 cut(s) 197, 500
Mox20I TGGCCA 1 cut(s) 260
Mph1103I ATGCAT 2 cut(s) 371, 1024
MroXI GAANNNNTTC 3 cut(s) 812, 826, 891
MscI TGGCCA 1 cut(s) 260
MslI CAYNNNNRTG 1 cut(s) 266
Msp20I TGGCCA 1 cut(s) 260
MspI CCGG 6 cut(s) 11, 92, 164, 273, 282, 543
MspR9I CCNGG 4 cut(s) 56, 164, 283, 481
MunI CAATTG 1 cut(s) 936
Mva1269I GAATGC 1 cut(s) 704
MvaI CCWGG 2 cut(s) 56, 481
MwoI GCNNNNNNNGC 2 cut(s) 85, 125
NciI CCSGG 2 cut(s) 164, 283
NdeI CATATG 1 cut(s) 583
NdeII GATC 3 cut(s) 412, 436, 472
NlaIII CATG 5 cut(s) 67, 713, 886, 999, 1026
NlaIV GGNNCC 3 cut(s) 9, 61, 310
NmeAIII GCCGAG 1 cut(s) 189
NmuCI GTSAC 2 cut(s) 268, 953
NsiI ATGCAT 2 cut(s) 371, 1024
NspI RCATGY 1 cut(s) 1026
OliI CACNNNNGTG 1 cut(s) 266
PaeI GCATGC 1 cut(s) 1026
PaeR7I CTCGAG 1 cut(s) 240
PagI TCATGA 1 cut(s) 709
PctI GAATGC 1 cut(s) 704
PdmI GAANNNNTTC 3 cut(s) 812, 826, 891
PfeI GAWTC 5 cut(s) 31, 132, 496, 539, 683
PflFI GACNNNGTC 1 cut(s) 248
PkrI GCNGC 3 cut(s) 90, 328, 877
PleI GAGTC 5 cut(s) 103, 140, 178, 847, 960
PpsI GAGTC 5 cut(s) 103, 140, 178, 847, 960
Psp124BI GAGCTC 1 cut(s) 1038
Psp6I CCWGG 2 cut(s) 54, 479
PspEI GGTNACC 1 cut(s) 268
PspGI CCWGG 2 cut(s) 54, 479
PspN4I GGNNCC 3 cut(s) 9, 61, 310
PspPI GGNCC 3 cut(s) 275, 308, 788
PsyI GACNNNGTC 1 cut(s) 248
RsaI GTAC 2 cut(s) 161, 911
RsaNI GTAC 2 cut(s) 160, 910
RseI CAYNNNNRTG 1 cut(s) 266
SacI GAGCTC 1 cut(s) 1038
SatI GCNGC 3 cut(s) 89, 327, 876
Sau3AI GATC 3 cut(s) 412, 436, 472
Sau96I GGNCC 3 cut(s) 275, 308, 788
SchI GAGTC 5 cut(s) 104, 140, 178, 848, 961
ScrFI CCNGG 4 cut(s) 56, 164, 283, 481
SduI GDGCHC 2 cut(s) 181, 1038
SfaNI GCATC 3 cut(s) 313, 787, 1009
SfcI CTRYAG 1 cut(s) 501
Sfr274I CTCGAG 1 cut(s) 240
SinI GGWCC 2 cut(s) 275, 788
SlaI CTCGAG 1 cut(s) 240
SmiMI CAYNNNNRTG 1 cut(s) 266
SmlI CTYRAG 1 cut(s) 240
SmoI CTYRAG 1 cut(s) 240
SphI GCATGC 1 cut(s) 1026
Sse9I AATT 2 cut(s) 485, 936
SsiI CCGC 3 cut(s) 5, 152, 786
SspI AATATT 1 cut(s) 334
SstI GAGCTC 1 cut(s) 1038
StyD4I CCNGG 4 cut(s) 54, 162, 281, 479
StyI CCWWGG 1 cut(s) 264
TaqI TCGA 6 cut(s) 111, 144, 241, 439, 494, 673
TasI AATT 2 cut(s) 485, 936
TfiI GAWTC 5 cut(s) 31, 132, 496, 539, 683
TscAI CASTG 2 cut(s) 361, 434
TseFI GTSAC 2 cut(s) 268, 953
TseI GCWGC 3 cut(s) 88, 326, 875
Tsp45I GTSAC 2 cut(s) 268, 953
TspDTI ATGAA 4 cut(s) 588, 608, 884, 908
TspGWI ACGGA 2 cut(s) 404, 417
TspRI CASTG 2 cut(s) 361, 434
Tth111I GACNNNGTC 1 cut(s) 248
VpaK11BI GGWCC 2 cut(s) 275, 788
XagI CCTNNNNNAGG 1 cut(s) 868
XceI RCATGY 1 cut(s) 1026
XhoI CTCGAG 1 cut(s) 240
XmiI GTMKAC 2 cut(s) 386, 754
XmnI GAANNNNTTC 3 cut(s) 812, 826, 891
Zsp2I ATGCAT 2 cut(s) 371, 1024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.