Rh6CG352800

Aldo-keto reductase-like isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0006387
Physical Location & Seq
Forward (+)
54198060 .. 54201679
3620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG352800.1

Sequence Viewer

Length: 921 bp
ATGACTTTCGGCGAGCAGAACACGCTGCCGGAGTCCTTTCGCCTCCTCGACCAAGCTTTCAACGCTGGAATCAACTTGTTCGACTCTGCGGAGATGTACCCGGTGGTTCAGCGAGCCCAGACTCAGGGCAGGAGCGAGGAGTATCTCGGCCGTTGGATTAGAGAGCGCAACATTCCTCGAGACAGCGTCGTTTTGGCCACCAAGGTGACCGGACCATCTGGGCAGATGACTTGGATAAGAGATGGCCCCAAGTGTTTGGATGCTGCGAATATCACTGAGGCCCTTGACAGCAGTCTACGGCGATTGCAGACGGATTACATTGATCTTTATCAGATACACTGGCCTGATCGATATGTTCCGATGTTTGGAGAAACTGAATATGATCCAACCAGGCAATTTGGTTCGATTCCTATAGAGGAACAACTTGACGCTCTTGGGAGAGCTGTTGATTCTGGTAAGGTCAGATATGTTGGTCTCAGTAATGAAACGGCATATGGTGTGATGAAGTTTCTTCAGGTGGCTGAAAGAGGCACTCACCTTCCAAAGATTGTATCTGTGCAGAACTCATACAGCTTGCTATGTCGAACTTTTGATTCTGGATTGGCTGAATGCTGTCATCATGAGAGGGTCAGTTTATTAGCTTACAGCCCTCTTGCAATGGGTATACTCTCTGGGAAGTATTTTTCACCGGAAGGCGGTCCTTCAGATGCTCGGTTGAACATTTTCAGAGGTAAGTTCTCAAATTATTTGTCAGATCTTTTTAATGTGAGAATTTTCTTCAGTCAAATTGGTGAACTTGTTTCAAGGCGGACTTTTCTTCTCTGTATATCAGGAAAGTATTCAGAAGGGGAGTCCAGATACAACTTGTCTAATCCCTCCATAAGGGCAGCAAGCATGGTACATGGTACAGAGGCACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

306

Amino Acids

34.43

Weight (kDa)

6.01

Isoelectric Point (pI)

46.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 2 - 231 1.1e-52 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 295, 664
AciI CCGC 3 cut(s) 89, 696, 808
AclWI GGATC 1 cut(s) 377
AcoI YGGCCR 2 cut(s) 148, 195
AcsI RAATTY 1 cut(s) 771
AcuI CTGAAG 3 cut(s) 497, 687, 763
AfaI GTAC 3 cut(s) 98, 900, 907
AfiI CCNNNNNNNGG 4 cut(s) 124, 365, 695, 882
AgsI TTSAA 3 cut(s) 61, 718, 804
AjnI CCWGG 1 cut(s) 389
AleI CACNNNNGTG 1 cut(s) 203
AluBI AGCT 4 cut(s) 56, 443, 573, 641
AluI AGCT 4 cut(s) 56, 443, 573, 641
Alw26I GTCTC 2 cut(s) 174, 479
AlwI GGATC 1 cut(s) 377
Ama87I CYCGRG 1 cut(s) 177
AoxI GGCC 5 cut(s) 148, 195, 244, 279, 341
ApeKI GCWGC 3 cut(s) 25, 263, 887
ApoI RAATTY 1 cut(s) 771
ArsI GACNNNNNNTTYG 2 cut(s) 734, 766
Asp700I GAANNNNTTC 2 cut(s) 722, 838
AspLEI GCGC 1 cut(s) 168
AspS9I GGNCC 4 cut(s) 212, 245, 280, 698
AsuC2I CCSGG 1 cut(s) 101
AsuHPI GGTGA 4 cut(s) 217, 527, 678, 803
AvaI CYCGRG 1 cut(s) 177
AvaII GGWCC 2 cut(s) 212, 698
BalI TGGCCA 1 cut(s) 197
BanII GRGCYC 1 cut(s) 118
BbvI GCAGC 3 cut(s) 12, 250, 899
BccI CCATC 2 cut(s) 223, 236
BceAI ACGGC 3 cut(s) 135, 314, 504
BciT130I CCWGG 1 cut(s) 391
BcnI CCSGG 1 cut(s) 101
BcoDI GTCTC 2 cut(s) 174, 479
BfmI CTRYAG 1 cut(s) 411
BglII AGATCT 1 cut(s) 754
BisI GCNGC 3 cut(s) 26, 264, 888
BlsI GCNGC 3 cut(s) 27, 265, 889
Bme1390I CCNGG 2 cut(s) 101, 391
Bme18I GGWCC 2 cut(s) 212, 698
BmeT110I CYCGRG 1 cut(s) 177
BmgT120I GGNCC 4 cut(s) 212, 245, 280, 698
BmiI GGNNCC 1 cut(s) 247
BmrFI CCNGG 2 cut(s) 101, 391
BmsI GCATC 2 cut(s) 250, 697
BoxI GACNNNNGTC 1 cut(s) 291
BpuMI CCSGG 1 cut(s) 101
Bsa29I ATCGAT 1 cut(s) 349
BsaBI GATNNNNATC 1 cut(s) 327
BsaI GGTCTC 1 cut(s) 479
BsaJI CCNNGG 1 cut(s) 201
BsaWI WCCGGW 2 cut(s) 209, 688
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 365, 695, 882
Bse1I ACTGG 1 cut(s) 344
Bse3DI GCAATG 1 cut(s) 663
Bse8I GATNNNNATC 1 cut(s) 327
BseBI CCWGG 1 cut(s) 391
BseCI ATCGAT 1 cut(s) 349
BseDI CCNNGG 1 cut(s) 201
BseGI GGATG 1 cut(s) 265
BseJI GATNNNNATC 1 cut(s) 327
BseLI CCNNNNNNNGG 4 cut(s) 124, 365, 695, 882
BseMI GCAATG 1 cut(s) 663
BseMII CTCAG 3 cut(s) 137, 267, 490
BseNI ACTGG 1 cut(s) 344
BseRI GAGGAG 2 cut(s) 35, 152
BseX3I CGGCCG 1 cut(s) 148
BseXI GCAGC 3 cut(s) 12, 250, 899
BsgI GTGCAG 1 cut(s) 578
Bsh1285I CGRYCG 1 cut(s) 151
BshFI GGCC 5 cut(s) 150, 197, 246, 281, 343
BshVI ATCGAT 1 cut(s) 349
BsiEI CGRYCG 1 cut(s) 151
BsiHKCI CYCGRG 1 cut(s) 177
BsiSI CCGG 4 cut(s) 29, 101, 210, 689
BslI CCNNNNNNNGG 4 cut(s) 124, 365, 695, 882
BsmAI GTCTC 2 cut(s) 174, 479
BsmI GAATGC 1 cut(s) 614
BsnI GGCC 5 cut(s) 150, 197, 246, 281, 343
Bso31I GGTCTC 1 cut(s) 479
BsoBI CYCGRG 1 cut(s) 177
Bsp1286I GDGCHC 1 cut(s) 118
Bsp143I GATC 4 cut(s) 322, 346, 382, 754
BspACI CCGC 3 cut(s) 89, 696, 808
BspANI GGCC 5 cut(s) 150, 197, 246, 281, 343
BspCNI CTCAG 3 cut(s) 136, 268, 489
BspDI ATCGAT 1 cut(s) 349
BspHI TCATGA 1 cut(s) 619
BspLI GGNNCC 1 cut(s) 247
BspPI GGATC 1 cut(s) 377
BspTNI GGTCTC 1 cut(s) 479
BsrDI GCAATG 1 cut(s) 663
BsrI ACTGG 1 cut(s) 344
BssECI CCNNGG 1 cut(s) 201
BssMI GATC 4 cut(s) 322, 346, 382, 754
BssNAI GTATAC 1 cut(s) 665
BssT1I CCWWGG 1 cut(s) 201
Bst1107I GTATAC 1 cut(s) 665
Bst2UI CCWGG 1 cut(s) 391
Bst4CI ACNGT 1 cut(s) 918
BstC8I GCNNGC 4 cut(s) 14, 114, 575, 892
BstDEI CTNAG 3 cut(s) 123, 276, 476
BstEII GGTNACC 1 cut(s) 205
BstENI CCTNNNNNAGG 1 cut(s) 880
BstF5I GGATG 1 cut(s) 265
BstHHI GCGC 1 cut(s) 168
BstKTI GATC 4 cut(s) 325, 349, 385, 757
BstMAI GTCTC 2 cut(s) 174, 479
BstMBI GATC 4 cut(s) 322, 346, 382, 754
BstMCI CGRYCG 1 cut(s) 151
BstMWI GCNNNNNNNGC 2 cut(s) 22, 62
BstNI CCWGG 1 cut(s) 391
BstPAI GACNNNNGTC 1 cut(s) 291
BstPI GGTNACC 1 cut(s) 205
BstSCI CCNGG 2 cut(s) 99, 389
BstSFI CTRYAG 1 cut(s) 411
BstV1I GCAGC 3 cut(s) 12, 250, 899
BstX2I RGATCY 1 cut(s) 754
BstXI CCANNNNNNTGG 1 cut(s) 256
BstYI RGATCY 1 cut(s) 754
BstZ17I GTATAC 1 cut(s) 665
BstZI CGGCCG 1 cut(s) 148
Bsu15I ATCGAT 1 cut(s) 349
BsuRI GGCC 5 cut(s) 150, 197, 246, 281, 343
BsuTUI ATCGAT 1 cut(s) 349
BtsCI GGATG 1 cut(s) 265
BtsIMutI CAGTG 3 cut(s) 273, 337, 914
Cac8I GCNNGC 4 cut(s) 14, 114, 575, 892
CciI TCATGA 1 cut(s) 619
CfoI GCGC 1 cut(s) 168
Cfr13I GGNCC 4 cut(s) 212, 245, 280, 698
ClaI ATCGAT 1 cut(s) 349
CseI GACGC 2 cut(s) 175, 437
Csp6I GTAC 3 cut(s) 97, 899, 906
CviAII CATG 3 cut(s) 620, 895, 902
CviQI GTAC 3 cut(s) 97, 899, 906
DdeI CTNAG 3 cut(s) 123, 276, 476
DpnI GATC 4 cut(s) 324, 348, 384, 756
DpnII GATC 4 cut(s) 322, 346, 382, 754
EaeI YGGCCR 2 cut(s) 148, 195
EagI CGGCCG 1 cut(s) 148
EciI GGCGGA 1 cut(s) 823
EclXI CGGCCG 1 cut(s) 148
Eco130I CCWWGG 1 cut(s) 201
Eco24I GRGCYC 1 cut(s) 118
Eco31I GGTCTC 1 cut(s) 479
Eco47I GGWCC 2 cut(s) 212, 698
Eco52I CGGCCG 1 cut(s) 148
Eco57I CTGAAG 3 cut(s) 497, 687, 763
Eco88I CYCGRG 1 cut(s) 177
Eco91I GGTNACC 1 cut(s) 205
EcoNI CCTNNNNNAGG 1 cut(s) 880
EcoO109I RGGNCCY 1 cut(s) 280
EcoO65I GGTNACC 1 cut(s) 205
EcoRII CCWGG 1 cut(s) 389
EcoT14I CCWWGG 1 cut(s) 201
EcoT38I GRGCYC 1 cut(s) 118
ErhI CCWWGG 1 cut(s) 201
FaeI CATG 3 cut(s) 623, 898, 905
FalI AAGNNNNNCTT 2 cut(s) 796, 828
FatI CATG 3 cut(s) 619, 894, 901
FauNDI CATATG 1 cut(s) 493
FblI GTMKAC 2 cut(s) 295, 664
Fnu4HI GCNGC 3 cut(s) 26, 264, 888
FokI GGATG 1 cut(s) 272
FriOI GRGCYC 1 cut(s) 118
Fsp4HI GCNGC 3 cut(s) 26, 264, 888
GlaI GCGC 1 cut(s) 167
GluI GCNGC 3 cut(s) 26, 264, 888
HaeIII GGCC 5 cut(s) 150, 197, 246, 281, 343
HapII CCGG 4 cut(s) 29, 101, 210, 689
HgaI GACGC 2 cut(s) 175, 437
HhaI GCGC 1 cut(s) 168
Hin1II CATG 3 cut(s) 623, 898, 905
Hin6I GCGC 1 cut(s) 166
HinP1I GCGC 1 cut(s) 166
HindIII AAGCTT 1 cut(s) 54
HinfI GANTC 8 cut(s) 32, 69, 83, 121, 406, 449, 593, 851
HpaII CCGG 4 cut(s) 29, 101, 210, 689
HphI GGTGA 4 cut(s) 217, 527, 678, 803
Hpy166II GTNNAC 3 cut(s) 296, 665, 794
Hpy188I TCNGA 7 cut(s) 333, 360, 464, 706, 728, 754, 844
Hpy188III TCNNGA 5 cut(s) 179, 597, 620, 831, 855
Hpy8I GTNNAC 3 cut(s) 296, 665, 794
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 4 cut(s) 548, 686, 711, 839
HpyCH4III ACNGT 1 cut(s) 918
HpyCH4V TGCA 3 cut(s) 307, 559, 656
HpyF10VI GCNNNNNNNGC 2 cut(s) 22, 62
HpyF3I CTNAG 3 cut(s) 123, 276, 476
Hsp92II CATG 3 cut(s) 623, 898, 905
HspAI GCGC 1 cut(s) 166
Kzo9I GATC 4 cut(s) 322, 346, 382, 754
LmnI GCTCC 1 cut(s) 132
Lsp1109I GCAGC 3 cut(s) 12, 250, 899
LweI GCATC 2 cut(s) 250, 697
MaeIII GTNAC 1 cut(s) 205
MalI GATC 4 cut(s) 324, 348, 384, 756
MboI GATC 4 cut(s) 322, 346, 382, 754
MboII GAAGA 3 cut(s) 503, 769, 809
MflI RGATCY 1 cut(s) 754
MhlI GDGCHC 1 cut(s) 118
MlsI TGGCCA 1 cut(s) 197
MluCI AATT 4 cut(s) 395, 742, 771, 786
MluNI TGGCCA 1 cut(s) 197
MlyI GAGTC 4 cut(s) 41, 77, 115, 860
MmeI TCCRAC 2 cut(s) 134, 410
Mox20I TGGCCA 1 cut(s) 197
MroXI GAANNNNTTC 2 cut(s) 722, 838
MscI TGGCCA 1 cut(s) 197
MseI TTAA 1 cut(s) 762
MslI CAYNNNNRTG 1 cut(s) 203
Msp20I TGGCCA 1 cut(s) 197
MspI CCGG 4 cut(s) 29, 101, 210, 689
MspR9I CCNGG 2 cut(s) 101, 391
Mva1269I GAATGC 1 cut(s) 614
MvaI CCWGG 1 cut(s) 391
MwoI GCNNNNNNNGC 2 cut(s) 22, 62
NciI CCSGG 1 cut(s) 101
NdeI CATATG 1 cut(s) 493
NdeII GATC 4 cut(s) 322, 346, 382, 754
NlaIII CATG 3 cut(s) 623, 898, 905
NlaIV GGNNCC 1 cut(s) 247
NmeAIII GCCGAG 1 cut(s) 126
NmuCI GTSAC 1 cut(s) 205
OliI CACNNNNGTG 1 cut(s) 203
PaeR7I CTCGAG 1 cut(s) 177
PagI TCATGA 1 cut(s) 619
PctI GAATGC 1 cut(s) 614
PdmI GAANNNNTTC 2 cut(s) 722, 838
PfeI GAWTC 4 cut(s) 69, 406, 449, 593
PflFI GACNNNGTC 1 cut(s) 185
PkrI GCNGC 3 cut(s) 27, 265, 889
PleI GAGTC 4 cut(s) 40, 77, 115, 859
PpsI GAGTC 4 cut(s) 40, 77, 115, 859
PshAI GACNNNNGTC 1 cut(s) 291
Psp6I CCWGG 1 cut(s) 389
PspEI GGTNACC 1 cut(s) 205
PspGI CCWGG 1 cut(s) 389
PspN4I GGNNCC 1 cut(s) 247
PspPI GGNCC 4 cut(s) 212, 245, 280, 698
PsuI RGATCY 1 cut(s) 754
PsyI GACNNNGTC 1 cut(s) 185
RsaI GTAC 3 cut(s) 98, 900, 907
RsaNI GTAC 3 cut(s) 97, 899, 906
RseI CAYNNNNRTG 1 cut(s) 203
SaqAI TTAA 1 cut(s) 762
SatI GCNGC 3 cut(s) 26, 264, 888
Sau3AI GATC 4 cut(s) 322, 346, 382, 754
Sau96I GGNCC 4 cut(s) 212, 245, 280, 698
SchI GAGTC 4 cut(s) 41, 77, 115, 860
ScrFI CCNGG 2 cut(s) 101, 391
SduI GDGCHC 1 cut(s) 118
SetI ASST 9 cut(s) 58, 207, 445, 462, 519, 540, 575, 643, 733
SfaNI GCATC 2 cut(s) 250, 697
SfcI CTRYAG 1 cut(s) 411
Sfr274I CTCGAG 1 cut(s) 177
SinI GGWCC 2 cut(s) 212, 698
SlaI CTCGAG 1 cut(s) 177
SmiMI CAYNNNNRTG 1 cut(s) 203
SmlI CTYRAG 1 cut(s) 177
SmoI CTYRAG 1 cut(s) 177
Sse9I AATT 4 cut(s) 395, 742, 771, 786
SsiI CCGC 3 cut(s) 89, 696, 808
StyD4I CCNGG 2 cut(s) 99, 389
StyI CCWWGG 1 cut(s) 201
TaaI ACNGT 1 cut(s) 918
TaqI TCGA 6 cut(s) 48, 81, 178, 349, 404, 583
TasI AATT 4 cut(s) 395, 742, 771, 786
TfiI GAWTC 4 cut(s) 69, 406, 449, 593
Tru1I TTAA 1 cut(s) 762
Tru9I TTAA 1 cut(s) 762
TscAI CASTG 3 cut(s) 280, 344, 921
TseFI GTSAC 1 cut(s) 205
TseI GCWGC 3 cut(s) 25, 263, 887
Tsp45I GTSAC 1 cut(s) 205
TspDTI ATGAA 2 cut(s) 498, 518
TspGWI ACGGA 1 cut(s) 326
TspRI CASTG 3 cut(s) 280, 344, 921
Tth111I GACNNNGTC 1 cut(s) 185
VpaK11BI GGWCC 2 cut(s) 212, 698
XagI CCTNNNNNAGG 1 cut(s) 880
XapI RAATTY 1 cut(s) 771
XhoI CTCGAG 1 cut(s) 177
XmiI GTMKAC 2 cut(s) 295, 664
XmnI GAANNNNTTC 2 cut(s) 722, 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.