Prupe.7G125500_v2.0.a1

Aldo-keto reductase-like isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0006387
Physical Location & Seq
Forward (+)
14745557 .. 14746200
644 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G125500.1

Sequence Viewer

Length: 345 bp
ATGATTCTTTGGCCCTCCCTCTCATCCTCAAATACAAATTCATTCTTCGTAGGGACGATGACTTTCGGGGAGCAAAACACGTTTCCAGAGTCGTTTGGCCTCCTCGACCAAGCTTTCCTGTCCTGCATCAATTTCTTTTCTTGGACTCTACAGAAATGTATCCAGTGGTTCAGCGAGCCCAGACTCAGGGTCAGGGGAGGAGTGAGGAGCGTCATTTTGGCCACCAAGGTACTGTCTGGAAAGATGACTTGGATACAAGATGGCCCCAGGTTTTTGAATGATAAGAATATCACCGAGGCCATTGATGGCAGGTTTGCTAAAGCAAACAGCGCAAACAGTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

115

Amino Acids

12.83

Weight (kDa)

9.23

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 300
AcoI YGGCCR 1 cut(s) 219
AcsI RAATTY 1 cut(s) 37
AfaI GTAC 1 cut(s) 231
AfiI CCNNNNNNNGG 1 cut(s) 186
AflIII ACRYGT 1 cut(s) 78
AgsI TTSAA 1 cut(s) 277
AhdI GACNNNNNGTC 1 cut(s) 188
AjnI CCWGG 1 cut(s) 266
AjuI GAANNNNNNNTTGG 2 cut(s) 232, 264
AluBI AGCT 1 cut(s) 113
AluI AGCT 1 cut(s) 113
AoxI GGCC 5 cut(s) 11, 97, 219, 262, 297
ApoI RAATTY 1 cut(s) 37
AspLEI GCGC 1 cut(s) 332
AspS9I GGNCC 2 cut(s) 12, 263
AsuHPI GGTGA 1 cut(s) 283
BalI TGGCCA 1 cut(s) 221
BanII GRGCYC 1 cut(s) 180
BccI CCATC 2 cut(s) 254, 299
BciT130I CCWGG 1 cut(s) 268
BciVI GTATCC 2 cut(s) 170, 246
BfmI CTRYAG 1 cut(s) 149
BfuAI ACCTGC 1 cut(s) 300
BfuI GTATCC 2 cut(s) 170, 246
Bme1390I CCNGG 1 cut(s) 268
BmeRI GACNNNNNGTC 1 cut(s) 188
BmgT120I GGNCC 2 cut(s) 12, 263
BmiI GGNNCC 1 cut(s) 265
BmrFI CCNGG 1 cut(s) 268
BmsI GCATC 1 cut(s) 135
BsaJI CCNNGG 3 cut(s) 225, 266, 294
Bsc4I CCNNNNNNNGG 1 cut(s) 186
Bse1I ACTGG 1 cut(s) 163
BseBI CCWGG 1 cut(s) 268
BseDI CCNNGG 3 cut(s) 225, 266, 294
BseGI GGATG 1 cut(s) 23
BseLI CCNNNNNNNGG 1 cut(s) 186
BseMII CTCAG 1 cut(s) 199
BseNI ACTGG 1 cut(s) 163
BseRI GAGGAG 3 cut(s) 92, 213, 220
BshFI GGCC 5 cut(s) 13, 99, 221, 264, 299
BslFI GGGAC 1 cut(s) 67
BslI CCNNNNNNNGG 1 cut(s) 186
BsmFI GGGAC 1 cut(s) 67
BsnI GGCC 5 cut(s) 13, 99, 221, 264, 299
Bsp1286I GDGCHC 1 cut(s) 180
BspANI GGCC 5 cut(s) 13, 99, 221, 264, 299
BspCNI CTCAG 1 cut(s) 198
BspLI GGNNCC 1 cut(s) 265
BspMI ACCTGC 1 cut(s) 300
BsrI ACTGG 1 cut(s) 163
BssECI CCNNGG 3 cut(s) 225, 266, 294
BssT1I CCWWGG 1 cut(s) 225
Bst2UI CCWGG 1 cut(s) 268
Bst4CI ACNGT 2 cut(s) 234, 338
BstC8I GCNNGC 1 cut(s) 176
BstDEI CTNAG 1 cut(s) 185
BstF5I GGATG 1 cut(s) 23
BstHHI GCGC 1 cut(s) 332
BstMWI GCNNNNNNNGC 1 cut(s) 329
BstNI CCWGG 1 cut(s) 268
BstSCI CCNGG 1 cut(s) 266
BstSFI CTRYAG 1 cut(s) 149
BsuI GTATCC 2 cut(s) 170, 246
BsuRI GGCC 5 cut(s) 13, 99, 221, 264, 299
BtsCI GGATG 1 cut(s) 23
BtsIMutI CAGTG 1 cut(s) 170
BveI ACCTGC 1 cut(s) 300
Cac8I GCNNGC 1 cut(s) 176
CfoI GCGC 1 cut(s) 332
Cfr13I GGNCC 2 cut(s) 12, 263
CseI GACGC 1 cut(s) 199
Csp6I GTAC 1 cut(s) 230
CviJI RGCY 7 cut(s) 13, 99, 113, 178, 221, 264, 299
CviKI_1 RGCY 7 cut(s) 13, 99, 113, 178, 221, 264, 299
CviQI GTAC 1 cut(s) 230
DdeI CTNAG 1 cut(s) 185
DriI GACNNNNNGTC 1 cut(s) 188
EaeI YGGCCR 1 cut(s) 219
Eam1105I GACNNNNNGTC 1 cut(s) 188
Eco130I CCWWGG 1 cut(s) 225
Eco24I GRGCYC 1 cut(s) 180
EcoRII CCWGG 1 cut(s) 266
EcoT14I CCWWGG 1 cut(s) 225
EcoT38I GRGCYC 1 cut(s) 180
ErhI CCWWGG 1 cut(s) 225
FaqI GGGAC 1 cut(s) 67
FokI GGATG 1 cut(s) 10
FriOI GRGCYC 1 cut(s) 180
GlaI GCGC 1 cut(s) 331
HaeIII GGCC 5 cut(s) 13, 99, 221, 264, 299
HgaI GACGC 1 cut(s) 199
HhaI GCGC 1 cut(s) 332
Hin6I GCGC 1 cut(s) 330
HinP1I GCGC 1 cut(s) 330
HindIII AAGCTT 1 cut(s) 111
HinfI GANTC 4 cut(s) 4, 89, 145, 183
HphI GGTGA 1 cut(s) 283
Hpy188III TCNNGA 2 cut(s) 86, 237
HpyCH4III ACNGT 2 cut(s) 234, 338
HpyCH4IV ACGT 1 cut(s) 80
HpyCH4V TGCA 1 cut(s) 126
HpyF10VI GCNNNNNNNGC 1 cut(s) 329
HpyF3I CTNAG 1 cut(s) 185
HpySE526I ACGT 1 cut(s) 80
HspAI GCGC 1 cut(s) 330
LmnI GCTCC 2 cut(s) 70, 207
LweI GCATC 1 cut(s) 135
MaeII ACGT 1 cut(s) 80
MboII GAAGA 1 cut(s) 37
MhlI GDGCHC 1 cut(s) 180
MlsI TGGCCA 1 cut(s) 221
MluCI AATT 2 cut(s) 37, 130
MluNI TGGCCA 1 cut(s) 221
MlyI GAGTC 3 cut(s) 98, 139, 177
MnlI CCTC 8 cut(s) 25, 29, 37, 110, 113, 191, 198, 289
Mox20I TGGCCA 1 cut(s) 221
MscI TGGCCA 1 cut(s) 221
Msp20I TGGCCA 1 cut(s) 221
MspR9I CCNGG 1 cut(s) 268
MvaI CCWGG 1 cut(s) 268
MwoI GCNNNNNNNGC 1 cut(s) 329
NlaIV GGNNCC 1 cut(s) 265
PfeI GAWTC 1 cut(s) 4
PleI GAGTC 3 cut(s) 97, 139, 177
PpsI GAGTC 3 cut(s) 97, 139, 177
Psp6I CCWGG 1 cut(s) 266
PspGI CCWGG 1 cut(s) 266
PspN4I GGNNCC 1 cut(s) 265
PspPI GGNCC 2 cut(s) 12, 263
RsaI GTAC 1 cut(s) 231
RsaNI GTAC 1 cut(s) 230
Sau96I GGNCC 2 cut(s) 12, 263
SchI GAGTC 3 cut(s) 98, 139, 177
ScrFI CCNGG 1 cut(s) 268
SduI GDGCHC 1 cut(s) 180
SetI ASST 5 cut(s) 83, 115, 231, 272, 314
SfaNI GCATC 1 cut(s) 135
SfcI CTRYAG 1 cut(s) 149
Sse9I AATT 2 cut(s) 37, 130
StyD4I CCNGG 1 cut(s) 266
StyI CCWWGG 1 cut(s) 225
TaaI ACNGT 2 cut(s) 234, 338
TaiI ACGT 1 cut(s) 83
TaqI TCGA 1 cut(s) 105
TasI AATT 2 cut(s) 37, 130
TfiI GAWTC 1 cut(s) 4
TscAI CASTG 1 cut(s) 170
TspDTI ATGAA 1 cut(s) 30
TspRI CASTG 1 cut(s) 170
XapI RAATTY 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.