Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0003866

Physical Location & Seq

Genomic Coordinates Forward (+)

371128 .. 373456

Gene Structure 2329 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1001900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGTACCATCATCAGCTGCAGCACCACCACCAAAACGAACACCAACACCAACACCAGCACCAGCACCAAGGAAAGAACATCATCCACTCTTCTGCTTCTTCAAGTAGAATATCGATGCCTAACATCCCTTCTGAAAGGCATTTGTTTCTACAGCAAGGTGACCAAAATAGCCCTGCAGGAGATTCAGGCCTTGTCCTCTCAACCGATGCCAAACCTCGACTCAAATGGACCCTCGATCTCCATGAGCGATTTATCGAAGCAGTTAACCAGCTTGGAGGAGCAGACAAGGCTACTCCGAAAACAGTTATGAAACTTATGGGGATTCCAGGGCTTACATTATACCACTTAAAGAGTCATCTTCAGTACAGGCTTAGCAAGAATCTGCATGGAGGACATGTTACTAGTGGCCCCACCAAAATTGGTACAGGTACAGTTCCAGTTTCAGAGGCAGGAGAAAGATTAATATCCGAAGCAAATGGAAGTCAGATGAGCACTATGAGCATTGGCATTGCACCCCAATCAAACAAAGGCTTACATTTAAATGAAACACTAGAGATGCAAATTGAAGTCCAGAGAAGGCTACATGAGCAACTTGAGGTTCAGCGGCACTTGCAACTTCGTATAGAGGCTCAAGGAAAATACCTACAGTCTGTGCTGGAGAAAGCCCAGGAGACACTAGGAAGACAAAACTTAGGTACAGTGGGACTTGAAGCTGCCAAAGTTCAACTCTCTGAGCTGGTGTCCAAAGTATCCTTGAACTCCGCTTTCACAGAGCTCAAAGAACTACAGGGATTGTGCCCTCAGAAAACGCAAACAAACCAGCAGCCCACCGATTGCTCAATCGACAGTTGCCTAACTTCCTGCGAAGGATTGAGAAGGGACCAGGACCAGATACACAGCAGTGGAATGCCTCTGAGACCTAATTACAGTGGCAGGGCAGCAGCACTCTTGGAACATAAAGAGGCTGCACAAGATCAGCCGCCAATGCTCCAAAACACCCAACTTAATTTGTGTGATGATCTGAAAGAGAACATGTTTCTTTCCTCCATAAGTAAGGATGCAGAAAAAAGAATGTTCCCTGCCGCAACAAGGTCTAGTGACTTATCCATGAGCATTGGACTACAAGGAGAAAACTGGAATATCGATAGCAAAGGAAGAGACACAGATGGAAGCTTTCTAGGCCGTACGAACAGCAGGGCTGATTCAGCTAAAGTCGAGGGTGCGAAAGTTTCTCAAGGATATAGATCAGTGCCTTACTTTGCAGCAAAACTAGACCTAAATGCTCATGATGATAATGATACTTCTTCAAGTTGCAGACAATTTGACTTGAATGGCTTCAGCTGGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010087 GO:0010088 GO:0010089 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_CC_LHEQLE Myb_DNA-binding

Protein Analysis

450

Amino Acids

49.72

Weight (kDa)

6.76

Isoelectric Point (pI)

50.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	73 - 122	4.2e-07	Myb-like DNA-binding domain
Myb_CC_LHEQLE	PF14379	179 - 225	1.2e-23	MYB-CC type transfactor, LHEQLE motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04030 AT3G04030 AT3G04030 AT3G04030 AT3G04030 AT5G18240 AT5G18240 AT5G18240 AT5G18240 AT5G18240 AT5G18240
fragaria_vesca	FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 FvH4_1g27990
malus_domestica	MD12G1001900.v1.1 MD14G1001600.v1.1
prunus_persica	Prupe.7G001700_v2.0.a1
pyrus_communis	pycom12g00160 pycom49g00110
rosa_chinensis	RchiOBHm_Chr3g0497321
rosa_laevigata	RLG00000022467
rosa_multiflora	Rmu_sc0001329.1_g000016
rosa_roxburghii	Rroxscaffold_6G00388110
rosa_rugosa	Rorug03G0292200 Rorug03G0292300 Rorug03G0292400 Rorug03G0292500
rosa_samantha	Rh3AG335900 Rh3BG374100 Rh3CG370000 Rh3DG371000
rosa_wichuraiana	Rw3G029540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	4 cut(s)	604, 762, 980, 1083
AcuI	CTGAAG	2 cut(s)	344, 1321
AfaI	GTAC	6 cut(s)	5, 365, 424, 430, 697, 1186
AfiI	CCNNNNNNNGG	1 cut(s)	1089
AflIII	ACRYGT	2 cut(s)	394, 1032
AgsI	TTSAA	7 cut(s)	102, 566, 710, 725, 757, 1308, 1330
AhlI	ACTAGT	1 cut(s)	401
AjnI	CCWGG	3 cut(s)	325, 666, 882
AleI	CACNNNNGTG	1 cut(s)	900
AluBI	AGCT	9 cut(s)	16, 271, 713, 736, 775, 1173, 1208, 1341, 1347
AluI	AGCT	9 cut(s)	16, 271, 713, 736, 775, 1173, 1208, 1341, 1347
Alw21I	GWGCWC	2 cut(s)	494, 777
Alw26I	GTCTC	3 cut(s)	665, 910, 1152
AoxI	GGCC	3 cut(s)	187, 406, 1180
ApeKI	GCWGC	8 cut(s)	16, 19, 713, 823, 938, 941, 965, 1262
AseI	ATTAAT	1 cut(s)	461
Asp700I	GAANNNNTTC	1 cut(s)	1334
AspS9I	GGNCC	4 cut(s)	228, 407, 880, 886
AsuHPI	GGTGA	1 cut(s)	170
AvaII	GGWCC	3 cut(s)	228, 880, 886
BaeGI	GKGCMC	1 cut(s)	800
BanII	GRGCYC	1 cut(s)	777
BbsI	GAAGAC	1 cut(s)	688
Bbv12I	GWGCWC	2 cut(s)	494, 777
BbvI	GCAGC	8 cut(s)	3, 31, 700, 835, 950, 952, 953, 1274
BccI	CCATC	2 cut(s)	15, 1160
BceAI	ACGGC	1 cut(s)	1167
BciT130I	CCWGG	3 cut(s)	327, 668, 884
BciVI	GTATCC	1 cut(s)	760
BcoDI	GTCTC	3 cut(s)	665, 910, 1152
BcuI	ACTAGT	1 cut(s)	401
BfaI	CTAG	6 cut(s)	402, 551, 677, 1095, 1178, 1271
BfmI	CTRYAG	5 cut(s)	17, 149, 174, 644, 785
BfuI	GTATCC	1 cut(s)	760
BlpI	GCTNAGC	1 cut(s)	371
Bme1390I	CCNGG	3 cut(s)	327, 668, 884
Bme18I	GGWCC	3 cut(s)	228, 880, 886
BmgT120I	GGNCC	4 cut(s)	228, 407, 880, 886
BmiI	GGNNCC	3 cut(s)	230, 409, 881
BmrFI	CCNGG	3 cut(s)	327, 668, 884
BmsI	GCATC	4 cut(s)	105, 196, 546, 1048
BpiI	GAAGAC	1 cut(s)	688
BpmI	CTGGAG	1 cut(s)	677
Bpu1102I	GCTNAGC	1 cut(s)	371
BpuEI	CTTGAG	3 cut(s)	614, 615, 1218
Bsa29I	ATCGAT	2 cut(s)	113, 1143
BsaBI	GATNNNNATC	2 cut(s)	463, 1243
BsaI	GGTCTC	1 cut(s)	910
BsaJI	CCNNGG	3 cut(s)	67, 326, 666
BsaXI	ACNNNNNCTCC	2 cut(s)	381, 411
Bsc4I	CCNNNNNNNGG	1 cut(s)	1089
Bse1I	ACTGG	2 cut(s)	437, 1139
Bse3DI	GCAATG	1 cut(s)	507
Bse8I	GATNNNNATC	2 cut(s)	463, 1243
BseBI	CCWGG	3 cut(s)	327, 668, 884
BseCI	ATCGAT	2 cut(s)	113, 1143
BseDI	CCNNGG	3 cut(s)	67, 326, 666
BseGI	GGATG	3 cut(s)	81, 123, 1063
BseJI	GATNNNNATC	2 cut(s)	463, 1243
BseLI	CCNNNNNNNGG	1 cut(s)	1089
BseMI	GCAATG	1 cut(s)	507
BseMII	CTCAG	3 cut(s)	723, 815, 905
BseNI	ACTGG	2 cut(s)	437, 1139
BseRI	GAGGAG	1 cut(s)	291
BseSI	GKGCMC	1 cut(s)	800
BseXI	GCAGC	8 cut(s)	3, 31, 700, 835, 950, 952, 953, 1274
BsgI	GTGCAG	1 cut(s)	951
BshFI	GGCC	3 cut(s)	189, 408, 1182
BshVI	ATCGAT	2 cut(s)	113, 1143
BsiHKAI	GWGCWC	2 cut(s)	494, 777
BsiWI	CGTACG	1 cut(s)	1184
BslFI	GGGAC	2 cut(s)	717, 893
BslI	CCNNNNNNNGG	1 cut(s)	1089
BsmAI	GTCTC	3 cut(s)	665, 910, 1152
BsmFI	GGGAC	2 cut(s)	717, 893
BsmI	GAATGC	1 cut(s)	912
BsnI	GGCC	3 cut(s)	189, 408, 1182
Bso31I	GGTCTC	1 cut(s)	910
Bsp1286I	GDGCHC	3 cut(s)	494, 777, 800
Bsp143I	GATC	4 cut(s)	235, 973, 1018, 1244
Bsp1720I	GCTNAGC	1 cut(s)	371
BspACI	CCGC	4 cut(s)	604, 762, 980, 1083
BspANI	GGCC	3 cut(s)	189, 408, 1182
BspCNI	CTCAG	3 cut(s)	724, 814, 906
BspDI	ATCGAT	2 cut(s)	113, 1143
BspHI	TCATGA	1 cut(s)	1285
BspLI	GGNNCC	3 cut(s)	230, 409, 881
BspMAI	CTGCAG	2 cut(s)	21, 178
BspTNI	GGTCTC	1 cut(s)	910
BsrDI	GCAATG	1 cut(s)	507
BsrI	ACTGG	2 cut(s)	437, 1139
BssECI	CCNNGG	3 cut(s)	67, 326, 666
BssMI	GATC	4 cut(s)	235, 973, 1018, 1244
BssT1I	CCWWGG	1 cut(s)	67
Bst2UI	CCWGG	3 cut(s)	327, 668, 884
Bst4CI	ACNGT	6 cut(s)	304, 433, 648, 700, 848, 929
Bst6I	CTCTTC	2 cut(s)	94, 1150
BstDEI	CTNAG	5 cut(s)	371, 691, 732, 801, 914
BstEII	GGTNACC	1 cut(s)	158
BstF5I	GGATG	3 cut(s)	81, 123, 1063
BstKTI	GATC	4 cut(s)	238, 976, 1021, 1247
BstMAI	GTCTC	3 cut(s)	665, 910, 1152
BstMBI	GATC	4 cut(s)	235, 973, 1018, 1244
BstMWI	GCNNNNNNNGC	7 cut(s)	287, 498, 586, 610, 985, 1179, 1205
BstNI	CCWGG	3 cut(s)	327, 668, 884
BstNSI	RCATGY	2 cut(s)	398, 1036
BstPI	GGTNACC	1 cut(s)	158
BstSCI	CCNGG	3 cut(s)	325, 666, 882
BstSFI	CTRYAG	5 cut(s)	17, 149, 174, 644, 785
BstSLI	GKGCMC	1 cut(s)	800
BstV1I	GCAGC	8 cut(s)	3, 31, 700, 835, 950, 952, 953, 1274
BstV2I	GAAGAC	1 cut(s)	688
Bsu15I	ATCGAT	2 cut(s)	113, 1143
BsuI	GTATCC	1 cut(s)	760
BsuRI	GGCC	3 cut(s)	189, 408, 1182
BsuTUI	ATCGAT	2 cut(s)	113, 1143
BtsCI	GGATG	3 cut(s)	81, 123, 1063
BtsI	GCAGTG	1 cut(s)	907
BtsIMutI	CAGTG	4 cut(s)	705, 907, 934, 1254
CciI	TCATGA	1 cut(s)	1285
Cfr13I	GGNCC	4 cut(s)	228, 407, 880, 886
ClaI	ATCGAT	2 cut(s)	113, 1143
Csp6I	GTAC	6 cut(s)	4, 364, 423, 429, 696, 1185
CspCI	CAANNNNNGTGG	2 cut(s)	400, 435
CviAII	CATG	7 cut(s)	242, 386, 395, 584, 1033, 1108, 1286
CviQI	GTAC	6 cut(s)	4, 364, 423, 429, 696, 1185
DdeI	CTNAG	5 cut(s)	371, 691, 732, 801, 914
DpnI	GATC	4 cut(s)	237, 975, 1020, 1246
DpnII	GATC	4 cut(s)	235, 973, 1018, 1244
DraI	TTTAAA	1 cut(s)	540
Eam1104I	CTCTTC	2 cut(s)	94, 1150
EarI	CTCTTC	2 cut(s)	94, 1150
Ecl136II	GAGCTC	1 cut(s)	775
Eco130I	CCWWGG	1 cut(s)	67
Eco147I	AGGCCT	1 cut(s)	189
Eco24I	GRGCYC	1 cut(s)	777
Eco31I	GGTCTC	1 cut(s)	910
Eco47I	GGWCC	3 cut(s)	228, 880, 886
Eco53kI	GAGCTC	1 cut(s)	775
Eco57I	CTGAAG	2 cut(s)	344, 1321
Eco91I	GGTNACC	1 cut(s)	158
EcoICRI	GAGCTC	1 cut(s)	775
EcoO65I	GGTNACC	1 cut(s)	158
EcoRII	CCWGG	3 cut(s)	325, 666, 882
EcoT14I	CCWWGG	1 cut(s)	67
EcoT38I	GRGCYC	1 cut(s)	777
ErhI	CCWWGG	1 cut(s)	67
FaeI	CATG	7 cut(s)	245, 389, 398, 587, 1036, 1111, 1289
FaqI	GGGAC	2 cut(s)	717, 893
FatI	CATG	7 cut(s)	241, 385, 394, 583, 1032, 1107, 1285
FokI	GGATG	3 cut(s)	68, 110, 1070
FriOI	GRGCYC	1 cut(s)	777
FspBI	CTAG	6 cut(s)	402, 551, 677, 1095, 1178, 1271
GsuI	CTGGAG	1 cut(s)	677
HaeIII	GGCC	3 cut(s)	189, 408, 1182
Hin1II	CATG	7 cut(s)	245, 389, 398, 587, 1036, 1111, 1289
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HindIII	AAGCTT	1 cut(s)	1171
HinfI	GANTC	6 cut(s)	182, 219, 322, 352, 379, 1202
HpaI	GTTAAC	1 cut(s)	265
HphI	GGTGA	1 cut(s)	170
Hpy166II	GTNNAC	1 cut(s)	265
Hpy188I	TCNGA	9 cut(s)	133, 297, 445, 469, 486, 733, 804, 915, 1023
Hpy188III	TCNNGA	2 cut(s)	571, 1286
Hpy8I	GTNNAC	1 cut(s)	265
HpyAV	CCTTC	4 cut(s)	138, 570, 860, 870
HpyCH4III	ACNGT	6 cut(s)	304, 433, 648, 700, 848, 929
HpyF10VI	GCNNNNNNNGC	7 cut(s)	287, 498, 586, 610, 985, 1179, 1205
HpyF3I	CTNAG	5 cut(s)	371, 691, 732, 801, 914
Hsp92II	CATG	7 cut(s)	245, 389, 398, 587, 1036, 1111, 1289
KspAI	GTTAAC	1 cut(s)	265
Kzo9I	GATC	4 cut(s)	235, 973, 1018, 1244
LmnI	GCTCC	3 cut(s)	278, 993, 1344
Lsp1109I	GCAGC	8 cut(s)	3, 31, 700, 835, 950, 952, 953, 1274
LweI	GCATC	4 cut(s)	105, 196, 546, 1048
MaeI	CTAG	6 cut(s)	402, 551, 677, 1095, 1178, 1271
MaeIII	GTNAC	3 cut(s)	158, 397, 1097
MalI	GATC	4 cut(s)	237, 975, 1020, 1246
MboI	GATC	4 cut(s)	235, 973, 1018, 1244
MboII	GAAGA	6 cut(s)	81, 90, 350, 693, 1167, 1296
MhlI	GDGCHC	3 cut(s)	494, 777, 800
MluCI	AATT	5 cut(s)	417, 561, 922, 1006, 1319
MlyI	GAGTC	2 cut(s)	213, 361
MroXI	GAANNNNTTC	1 cut(s)	1334
MseI	TTAA	5 cut(s)	264, 347, 461, 539, 1005
MslI	CAYNNNNRTG	2 cut(s)	540, 900
MspA1I	CMGCKG	3 cut(s)	16, 604, 1341
MspR9I	CCNGG	3 cut(s)	327, 668, 884
Mva1269I	GAATGC	1 cut(s)	912
MvaI	CCWGG	3 cut(s)	327, 668, 884
MwoI	GCNNNNNNNGC	7 cut(s)	287, 498, 586, 610, 985, 1179, 1205
NdeII	GATC	4 cut(s)	235, 973, 1018, 1244
NlaIII	CATG	7 cut(s)	245, 389, 398, 587, 1036, 1111, 1289
NlaIV	GGNNCC	3 cut(s)	230, 409, 881
NmuCI	GTSAC	2 cut(s)	158, 1097
NspI	RCATGY	2 cut(s)	398, 1036
OliI	CACNNNNGTG	1 cut(s)	900
PagI	TCATGA	1 cut(s)	1285
PceI	AGGCCT	1 cut(s)	189
PciI	ACATGT	2 cut(s)	394, 1032
PctI	GAATGC	1 cut(s)	912
PdmI	GAANNNNTTC	1 cut(s)	1334
PfeI	GAWTC	4 cut(s)	182, 322, 379, 1202
Pfl23II	CGTACG	1 cut(s)	1184
PleI	GAGTC	2 cut(s)	213, 360
PpsI	GAGTC	2 cut(s)	213, 360
PscI	ACATGT	2 cut(s)	394, 1032
PshBI	ATTAAT	1 cut(s)	461
Psp124BI	GAGCTC	1 cut(s)	777
Psp6I	CCWGG	3 cut(s)	325, 666, 882
PspEI	GGTNACC	1 cut(s)	158
PspGI	CCWGG	3 cut(s)	325, 666, 882
PspLI	CGTACG	1 cut(s)	1184
PspN4I	GGNNCC	3 cut(s)	230, 409, 881
PspPI	GGNCC	4 cut(s)	228, 407, 880, 886
PstI	CTGCAG	2 cut(s)	21, 178
PvuII	CAGCTG	2 cut(s)	16, 1341
RsaI	GTAC	6 cut(s)	5, 365, 424, 430, 697, 1186
RsaNI	GTAC	6 cut(s)	4, 364, 423, 429, 696, 1185
RseI	CAYNNNNRTG	2 cut(s)	540, 900
SacI	GAGCTC	1 cut(s)	777
SaqAI	TTAA	5 cut(s)	264, 347, 461, 539, 1005
Sau3AI	GATC	4 cut(s)	235, 973, 1018, 1244
Sau96I	GGNCC	4 cut(s)	228, 407, 880, 886
SbfI	CCTGCAGG	1 cut(s)	178
SchI	GAGTC	2 cut(s)	213, 361
ScrFI	CCNGG	3 cut(s)	327, 668, 884
SdaI	CCTGCAGG	1 cut(s)	178
SduI	GDGCHC	3 cut(s)	494, 777, 800
SfaNI	GCATC	4 cut(s)	105, 196, 546, 1048
SfcI	CTRYAG	5 cut(s)	17, 149, 174, 644, 785
SinI	GGWCC	3 cut(s)	228, 880, 886
SmiI	ATTTAAAT	1 cut(s)	540
SmiMI	CAYNNNNRTG	2 cut(s)	540, 900
SmlI	CTYRAG	3 cut(s)	593, 630, 1233
SmoI	CTYRAG	3 cut(s)	593, 630, 1233
SpeI	ACTAGT	1 cut(s)	401
Sse8387I	CCTGCAGG	1 cut(s)	178
Sse9I	AATT	5 cut(s)	417, 561, 922, 1006, 1319
SseBI	AGGCCT	1 cut(s)	189
SsiI	CCGC	4 cut(s)	604, 762, 980, 1083
SspMI	CTAG	6 cut(s)	402, 551, 677, 1095, 1178, 1271
SstI	GAGCTC	1 cut(s)	777
StuI	AGGCCT	1 cut(s)	189
StyD4I	CCNGG	3 cut(s)	325, 666, 882
StyI	CCWWGG	1 cut(s)	67
SwaI	ATTTAAAT	1 cut(s)	540
TaaI	ACNGT	6 cut(s)	304, 433, 648, 700, 848, 929
TaqI	TCGA	7 cut(s)	113, 217, 234, 255, 843, 1143, 1215
TasI	AATT	5 cut(s)	417, 561, 922, 1006, 1319
TatI	WGTACW	1 cut(s)	363
TauI	GCSGC	3 cut(s)	607, 982, 1085
TfiI	GAWTC	4 cut(s)	182, 322, 379, 1202
Tru1I	TTAA	5 cut(s)	264, 347, 461, 539, 1005
Tru9I	TTAA	5 cut(s)	264, 347, 461, 539, 1005
TscAI	CASTG	4 cut(s)	705, 907, 934, 1254
TseFI	GTSAC	2 cut(s)	158, 1097
TseI	GCWGC	8 cut(s)	16, 19, 713, 823, 938, 941, 965, 1262
Tsp45I	GTSAC	2 cut(s)	158, 1097
TspDTI	ATGAA	2 cut(s)	323, 558
TspRI	CASTG	4 cut(s)	705, 907, 934, 1254
VpaK11BI	GGWCC	3 cut(s)	228, 880, 886
VspI	ATTAAT	1 cut(s)	461
XceI	RCATGY	2 cut(s)	398, 1036
XmnI	GAANNNNTTC	1 cut(s)	1334
XspI	CTAG	6 cut(s)	402, 551, 677, 1095, 1178, 1271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.