MYB-CC type transfactor, LHEQLE motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04030 AT3G04030 AT3G04030 AT3G04030 AT3G04030 AT5G18240 AT5G18240 AT5G18240 AT5G18240 AT5G18240 AT5G18240 |
| fragaria_vesca | FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 |
| malus_domestica | MD12G1001900.v1.1 MD14G1001600.v1.1 |
| prunus_persica | Prupe.7G001700_v2.0.a1 |
| pyrus_communis | pycom12g00160 pycom49g00110 |
| rosa_chinensis | RchiOBHm_Chr3g0497321 |
| rosa_laevigata | RLG00000022467 |
| rosa_multiflora | Rmu_sc0001329.1_g000016 |
| rosa_roxburghii | Rroxscaffold_6G00388110 |
| rosa_rugosa | Rorug03G0292200 Rorug03G0292300 Rorug03G0292400 Rorug03G0292500 |
| rosa_samantha | Rh3AG335900 Rh3BG374100 Rh3CG370000 Rh3DG371000 |
| rosa_wichuraiana | Rw3G029540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 885 |
| AatII | GACGTC | 1 cut(s) | 821 |
| AccIII | TCCGGA | 1 cut(s) | 112 |
| AciI | CCGC | 1 cut(s) | 1154 |
| AclWI | GGATC | 1 cut(s) | 838 |
| AcuI | CTGAAG | 3 cut(s) | 320, 450, 1113 |
| AcyI | GRCGYC | 2 cut(s) | 206, 818 |
| AfaI | GTAC | 5 cut(s) | 8, 344, 400, 652, 1141 |
| AflII | CTTAAG | 1 cut(s) | 938 |
| AgsI | TTSAA | 8 cut(s) | 521, 680, 721, 801, 1032, 1105, 1263, 1285 |
| AjnI | CCWGG | 4 cut(s) | 151, 301, 621, 900 |
| AleI | CACNNNNGTG | 1 cut(s) | 858 |
| Alw21I | GWGCWC | 1 cut(s) | 900 |
| Alw26I | GTCTC | 2 cut(s) | 620, 1166 |
| AlwI | GGATC | 1 cut(s) | 838 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1175 |
| Ama87I | CYCGRG | 1 cut(s) | 1188 |
| Aor13HI | TCCGGA | 1 cut(s) | 112 |
| AoxI | GGCC | 1 cut(s) | 304 |
| ApeKI | GCWGC | 5 cut(s) | 413, 668, 810, 998, 1217 |
| AspS9I | GGNCC | 4 cut(s) | 149, 384, 467, 841 |
| AsuC2I | CCSGG | 1 cut(s) | 1151 |
| AsuHPI | GGTGA | 1 cut(s) | 149 |
| AvaI | CYCGRG | 1 cut(s) | 1188 |
| AvaII | GGWCC | 4 cut(s) | 149, 384, 467, 841 |
| BaeGI | GKGCMC | 1 cut(s) | 764 |
| BanII | GRGCYC | 1 cut(s) | 900 |
| BbsI | GAAGAC | 2 cut(s) | 643, 935 |
| Bbv12I | GWGCWC | 1 cut(s) | 900 |
| BbvI | GCAGC | 5 cut(s) | 425, 655, 797, 985, 1229 |
| BccI | CCATC | 3 cut(s) | 18, 33, 1065 |
| BciT130I | CCWGG | 4 cut(s) | 153, 303, 623, 902 |
| BciVI | GTATCC | 1 cut(s) | 715 |
| BclI | TGATCA | 1 cut(s) | 139 |
| BcnI | CCSGG | 1 cut(s) | 1151 |
| BcoDI | GTCTC | 2 cut(s) | 620, 1166 |
| BfaI | CTAG | 5 cut(s) | 192, 248, 632, 1133, 1226 |
| BfmI | CTRYAG | 3 cut(s) | 131, 599, 923 |
| BfrI | CTTAAG | 1 cut(s) | 938 |
| BfuI | GTATCC | 1 cut(s) | 715 |
| BisI | GCNGC | 5 cut(s) | 414, 669, 811, 999, 1218 |
| BlpI | GCTNAGC | 1 cut(s) | 350 |
| BlsI | GCNGC | 5 cut(s) | 415, 670, 812, 1000, 1219 |
| Bme1390I | CCNGG | 5 cut(s) | 153, 303, 623, 902, 1151 |
| Bme18I | GGWCC | 4 cut(s) | 149, 384, 467, 841 |
| BmeT110I | CYCGRG | 1 cut(s) | 1188 |
| BmgT120I | GGNCC | 4 cut(s) | 149, 384, 467, 841 |
| BmiI | GGNNCC | 3 cut(s) | 385, 442, 469 |
| BmrFI | CCNGG | 5 cut(s) | 153, 303, 623, 902, 1151 |
| BmsI | GCATC | 3 cut(s) | 172, 985, 1243 |
| BpiI | GAAGAC | 2 cut(s) | 643, 935 |
| BpmI | CTGGAG | 2 cut(s) | 174, 632 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 350 |
| BpuEI | CTTGAG | 3 cut(s) | 308, 569, 570 |
| BpuMI | CCSGG | 1 cut(s) | 1151 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1198 |
| BsaHI | GRCGYC | 2 cut(s) | 206, 818 |
| BsaJI | CCNNGG | 2 cut(s) | 58, 621 |
| BsaWI | WCCGGW | 2 cut(s) | 112, 1015 |
| Bse1I | ACTGG | 2 cut(s) | 407, 696 |
| Bse3DI | GCAATG | 1 cut(s) | 870 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1198 |
| BseAI | TCCGGA | 1 cut(s) | 112 |
| BseBI | CCWGG | 4 cut(s) | 153, 303, 623, 902 |
| BseDI | CCNNGG | 2 cut(s) | 58, 621 |
| BseGI | GGATG | 5 cut(s) | 69, 105, 910, 1061, 1199 |
| BseJI | GATNNNNATC | 1 cut(s) | 1198 |
| BseMI | GCAATG | 1 cut(s) | 870 |
| BseMII | CTCAG | 2 cut(s) | 924, 1167 |
| BseNI | ACTGG | 2 cut(s) | 407, 696 |
| BseRI | GAGGAG | 1 cut(s) | 267 |
| BseSI | GKGCMC | 1 cut(s) | 764 |
| BseXI | GCAGC | 5 cut(s) | 425, 655, 797, 985, 1229 |
| BseYI | CCCAGC | 2 cut(s) | 765, 783 |
| BsgI | GTGCAG | 1 cut(s) | 545 |
| BshFI | GGCC | 1 cut(s) | 306 |
| BsiHKAI | GWGCWC | 1 cut(s) | 900 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1188 |
| BsiSI | CCGG | 3 cut(s) | 113, 1016, 1150 |
| BslFI | GGGAC | 3 cut(s) | 397, 672, 1190 |
| BsmAI | GTCTC | 2 cut(s) | 620, 1166 |
| BsmFI | GGGAC | 3 cut(s) | 397, 672, 1190 |
| BsnI | GGCC | 1 cut(s) | 306 |
| BsoBI | CYCGRG | 1 cut(s) | 1188 |
| Bsp1286I | GDGCHC | 2 cut(s) | 764, 900 |
| Bsp13I | TCCGGA | 1 cut(s) | 112 |
| Bsp143I | GATC | 4 cut(s) | 139, 211, 830, 1199 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 350 |
| BspACI | CCGC | 1 cut(s) | 1154 |
| BspANI | GGCC | 1 cut(s) | 306 |
| BspCNI | CTCAG | 2 cut(s) | 925, 1168 |
| BspEI | TCCGGA | 1 cut(s) | 112 |
| BspHI | TCATGA | 1 cut(s) | 1240 |
| BspLI | GGNNCC | 3 cut(s) | 385, 442, 469 |
| BspPI | GGATC | 1 cut(s) | 838 |
| BspTI | CTTAAG | 1 cut(s) | 938 |
| BsrDI | GCAATG | 1 cut(s) | 870 |
| BsrI | ACTGG | 2 cut(s) | 407, 696 |
| BssECI | CCNNGG | 2 cut(s) | 58, 621 |
| BssMI | GATC | 4 cut(s) | 139, 211, 830, 1199 |
| BssNI | GRCGYC | 2 cut(s) | 206, 818 |
| BssT1I | CCWWGG | 1 cut(s) | 58 |
| Bst2UI | CCWGG | 4 cut(s) | 153, 303, 623, 902 |
| Bst4CI | ACNGT | 7 cut(s) | 280, 403, 603, 655, 860, 1139, 1275 |
| Bst6I | CTCTTC | 1 cut(s) | 82 |
| BstACI | GRCGYC | 2 cut(s) | 206, 818 |
| BstAFI | CTTAAG | 1 cut(s) | 938 |
| BstDEI | CTNAG | 5 cut(s) | 350, 646, 872, 933, 1176 |
| BstF5I | GGATG | 5 cut(s) | 69, 105, 910, 1061, 1199 |
| BstKTI | GATC | 4 cut(s) | 142, 214, 833, 1202 |
| BstMAI | GTCTC | 2 cut(s) | 620, 1166 |
| BstMBI | GATC | 4 cut(s) | 139, 211, 830, 1199 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 263, 532, 1160 |
| BstNI | CCWGG | 4 cut(s) | 153, 303, 623, 902 |
| BstNSI | RCATGY | 2 cut(s) | 374, 973 |
| BstSCI | CCNGG | 5 cut(s) | 151, 301, 621, 900, 1149 |
| BstSFI | CTRYAG | 3 cut(s) | 131, 599, 923 |
| BstSLI | GKGCMC | 1 cut(s) | 764 |
| BstV1I | GCAGC | 5 cut(s) | 425, 655, 797, 985, 1229 |
| BstV2I | GAAGAC | 2 cut(s) | 643, 935 |
| BstX2I | RGATCY | 1 cut(s) | 830 |
| BstYI | RGATCY | 1 cut(s) | 830 |
| BsuI | GTATCC | 1 cut(s) | 715 |
| BsuRI | GGCC | 1 cut(s) | 306 |
| BtsCI | GGATG | 5 cut(s) | 69, 105, 910, 1061, 1199 |
| BtsIMutI | CAGTG | 4 cut(s) | 414, 612, 660, 865 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1175 |
| CciI | TCATGA | 1 cut(s) | 1240 |
| Cfr13I | GGNCC | 4 cut(s) | 149, 384, 467, 841 |
| CseI | GACGC | 1 cut(s) | 214 |
| Csp6I | GTAC | 5 cut(s) | 7, 343, 399, 651, 1140 |
| CviAII | CATG | 8 cut(s) | 365, 371, 448, 539, 919, 970, 1045, 1241 |
| CviQI | GTAC | 5 cut(s) | 7, 343, 399, 651, 1140 |
| DdeI | CTNAG | 5 cut(s) | 350, 646, 872, 933, 1176 |
| DpnI | GATC | 4 cut(s) | 141, 213, 832, 1201 |
| DpnII | GATC | 4 cut(s) | 139, 211, 830, 1199 |
| Eam1104I | CTCTTC | 1 cut(s) | 82 |
| EarI | CTCTTC | 1 cut(s) | 82 |
| EciI | GGCGGA | 1 cut(s) | 1169 |
| Ecl136II | GAGCTC | 1 cut(s) | 898 |
| Eco130I | CCWWGG | 1 cut(s) | 58 |
| Eco147I | AGGCCT | 1 cut(s) | 306 |
| Eco24I | GRGCYC | 1 cut(s) | 900 |
| Eco47I | GGWCC | 4 cut(s) | 149, 384, 467, 841 |
| Eco53kI | GAGCTC | 1 cut(s) | 898 |
| Eco57I | CTGAAG | 3 cut(s) | 320, 450, 1113 |
| Eco88I | CYCGRG | 1 cut(s) | 1188 |
| EcoICRI | GAGCTC | 1 cut(s) | 898 |
| EcoRII | CCWGG | 4 cut(s) | 151, 301, 621, 900 |
| EcoT14I | CCWWGG | 1 cut(s) | 58 |
| EcoT38I | GRGCYC | 1 cut(s) | 900 |
| ErhI | CCWWGG | 1 cut(s) | 58 |
| FaeI | CATG | 8 cut(s) | 368, 374, 451, 542, 922, 973, 1048, 1244 |
| FaqI | GGGAC | 3 cut(s) | 397, 672, 1190 |
| FatI | CATG | 8 cut(s) | 364, 370, 447, 538, 918, 969, 1044, 1240 |
| FbaI | TGATCA | 1 cut(s) | 139 |
| Fnu4HI | GCNGC | 5 cut(s) | 414, 669, 811, 999, 1218 |
| FokI | GGATG | 5 cut(s) | 56, 112, 917, 1068, 1206 |
| FriOI | GRGCYC | 1 cut(s) | 900 |
| Fsp4HI | GCNGC | 5 cut(s) | 414, 669, 811, 999, 1218 |
| FspBI | CTAG | 5 cut(s) | 192, 248, 632, 1133, 1226 |
| GluI | GCNGC | 5 cut(s) | 414, 669, 811, 999, 1218 |
| GsaI | CCCAGC | 2 cut(s) | 769, 787 |
| GsuI | CTGGAG | 2 cut(s) | 174, 632 |
| HaeIII | GGCC | 1 cut(s) | 306 |
| HapII | CCGG | 3 cut(s) | 113, 1016, 1150 |
| HgaI | GACGC | 1 cut(s) | 214 |
| Hin1I | GRCGYC | 2 cut(s) | 206, 818 |
| Hin1II | CATG | 8 cut(s) | 368, 374, 451, 542, 922, 973, 1048, 1244 |
| HincII | GTYRAC | 1 cut(s) | 241 |
| HindII | GTYRAC | 1 cut(s) | 241 |
| HinfI | GANTC | 7 cut(s) | 158, 195, 298, 328, 358, 660, 1157 |
| HpaI | GTTAAC | 1 cut(s) | 241 |
| HpaII | CCGG | 3 cut(s) | 113, 1016, 1150 |
| HphI | GGTGA | 1 cut(s) | 149 |
| Hpy166II | GTNNAC | 1 cut(s) | 241 |
| Hpy188I | TCNGA | 4 cut(s) | 339, 430, 688, 1093 |
| Hpy188III | TCNNGA | 6 cut(s) | 113, 162, 325, 1133, 1188, 1241 |
| Hpy8I | GTNNAC | 1 cut(s) | 241 |
| HpyAV | CCTTC | 3 cut(s) | 525, 821, 1269 |
| HpyCH4III | ACNGT | 7 cut(s) | 280, 403, 603, 655, 860, 1139, 1275 |
| HpyCH4IV | ACGT | 1 cut(s) | 818 |
| HpyCH4V | TGCA | 7 cut(s) | 364, 514, 526, 863, 1001, 1217, 1269 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 263, 532, 1160 |
| HpyF3I | CTNAG | 5 cut(s) | 350, 646, 872, 933, 1176 |
| HpySE526I | ACGT | 1 cut(s) | 818 |
| Hsp92I | GRCGYC | 2 cut(s) | 206, 818 |
| Hsp92II | CATG | 8 cut(s) | 368, 374, 451, 542, 922, 973, 1048, 1244 |
| Kpn2I | TCCGGA | 1 cut(s) | 112 |
| Ksp22I | TGATCA | 1 cut(s) | 139 |
| KspAI | GTTAAC | 1 cut(s) | 241 |
| Kzo9I | GATC | 4 cut(s) | 139, 211, 830, 1199 |
| LmnI | GCTCC | 5 cut(s) | 254, 736, 903, 1261, 1299 |
| Lsp1109I | GCAGC | 5 cut(s) | 425, 655, 797, 985, 1229 |
| LweI | GCATC | 3 cut(s) | 172, 985, 1243 |
| MaeI | CTAG | 5 cut(s) | 192, 248, 632, 1133, 1226 |
| MaeII | ACGT | 1 cut(s) | 818 |
| MaeIII | GTNAC | 2 cut(s) | 486, 1034 |
| MalI | GATC | 4 cut(s) | 141, 213, 832, 1201 |
| MboI | GATC | 4 cut(s) | 139, 211, 830, 1199 |
| MflI | RGATCY | 1 cut(s) | 830 |
| MhlI | GDGCHC | 2 cut(s) | 764, 900 |
| MluCI | AATT | 4 cut(s) | 393, 516, 746, 880 |
| MlyI | GAGTC | 4 cut(s) | 167, 189, 337, 654 |
| MnlI | CCTC | 9 cut(s) | 90, 120, 182, 245, 332, 544, 574, 991, 1184 |
| MroI | TCCGGA | 1 cut(s) | 112 |
| MseI | TTAA | 3 cut(s) | 240, 939, 1080 |
| MslI | CAYNNNNRTG | 3 cut(s) | 369, 495, 858 |
| MspCI | CTTAAG | 1 cut(s) | 938 |
| MspI | CCGG | 3 cut(s) | 113, 1016, 1150 |
| MspR9I | CCNGG | 5 cut(s) | 153, 303, 623, 902, 1151 |
| MvaI | CCWGG | 4 cut(s) | 153, 303, 623, 902 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 263, 532, 1160 |
| NciI | CCSGG | 1 cut(s) | 1151 |
| NdeII | GATC | 4 cut(s) | 139, 211, 830, 1199 |
| NlaIII | CATG | 8 cut(s) | 368, 374, 451, 542, 922, 973, 1048, 1244 |
| NlaIV | GGNNCC | 3 cut(s) | 385, 442, 469 |
| NmuCI | GTSAC | 1 cut(s) | 1034 |
| NspI | RCATGY | 2 cut(s) | 374, 973 |
| OliI | CACNNNNGTG | 1 cut(s) | 858 |
| PaeR7I | CTCGAG | 1 cut(s) | 1188 |
| PagI | TCATGA | 1 cut(s) | 1240 |
| PceI | AGGCCT | 1 cut(s) | 306 |
| PfeI | GAWTC | 3 cut(s) | 298, 358, 1157 |
| PfoI | TCCNGGA | 2 cut(s) | 151, 900 |
| PkrI | GCNGC | 5 cut(s) | 415, 670, 812, 1000, 1219 |
| PleI | GAGTC | 4 cut(s) | 166, 189, 336, 654 |
| PpsI | GAGTC | 4 cut(s) | 166, 189, 336, 654 |
| PsiI | TTATAA | 1 cut(s) | 885 |
| Psp124BI | GAGCTC | 1 cut(s) | 900 |
| Psp6I | CCWGG | 4 cut(s) | 151, 301, 621, 900 |
| PspFI | CCCAGC | 2 cut(s) | 765, 783 |
| PspGI | CCWGG | 4 cut(s) | 151, 301, 621, 900 |
| PspN4I | GGNNCC | 3 cut(s) | 385, 442, 469 |
| PspPI | GGNCC | 4 cut(s) | 149, 384, 467, 841 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 906, 938 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1175 |
| PsuI | RGATCY | 1 cut(s) | 830 |
| RsaI | GTAC | 5 cut(s) | 8, 344, 400, 652, 1141 |
| RsaNI | GTAC | 5 cut(s) | 7, 343, 399, 651, 1140 |
| RseI | CAYNNNNRTG | 3 cut(s) | 369, 495, 858 |
| SacI | GAGCTC | 1 cut(s) | 900 |
| SaqAI | TTAA | 3 cut(s) | 240, 939, 1080 |
| SatI | GCNGC | 5 cut(s) | 414, 669, 811, 999, 1218 |
| Sau3AI | GATC | 4 cut(s) | 139, 211, 830, 1199 |
| Sau96I | GGNCC | 4 cut(s) | 149, 384, 467, 841 |
| SchI | GAGTC | 4 cut(s) | 167, 189, 337, 654 |
| ScrFI | CCNGG | 5 cut(s) | 153, 303, 623, 902, 1151 |
| SduI | GDGCHC | 2 cut(s) | 764, 900 |
| SfaNI | GCATC | 3 cut(s) | 172, 985, 1243 |
| SfcI | CTRYAG | 3 cut(s) | 131, 599, 923 |
| Sfr274I | CTCGAG | 1 cut(s) | 1188 |
| SinI | GGWCC | 4 cut(s) | 149, 384, 467, 841 |
| SlaI | CTCGAG | 1 cut(s) | 1188 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 369, 495, 858 |
| SmlI | CTYRAG | 5 cut(s) | 323, 548, 585, 938, 1188 |
| SmoI | CTYRAG | 5 cut(s) | 323, 548, 585, 938, 1188 |
| Sse9I | AATT | 4 cut(s) | 393, 516, 746, 880 |
| SseBI | AGGCCT | 1 cut(s) | 306 |
| SsiI | CCGC | 1 cut(s) | 1154 |
| SspMI | CTAG | 5 cut(s) | 192, 248, 632, 1133, 1226 |
| SstI | GAGCTC | 1 cut(s) | 900 |
| StuI | AGGCCT | 1 cut(s) | 306 |
| StyD4I | CCNGG | 5 cut(s) | 151, 301, 621, 900, 1149 |
| StyI | CCWWGG | 1 cut(s) | 58 |
| TaaI | ACNGT | 7 cut(s) | 280, 403, 603, 655, 860, 1139, 1275 |
| TaiI | ACGT | 1 cut(s) | 821 |
| TaqI | TCGA | 4 cut(s) | 95, 231, 663, 1189 |
| TasI | AATT | 4 cut(s) | 393, 516, 746, 880 |
| TatI | WGTACW | 1 cut(s) | 342 |
| TfiI | GAWTC | 3 cut(s) | 298, 358, 1157 |
| Tru1I | TTAA | 3 cut(s) | 240, 939, 1080 |
| Tru9I | TTAA | 3 cut(s) | 240, 939, 1080 |
| TscAI | CASTG | 4 cut(s) | 414, 612, 660, 865 |
| TseFI | GTSAC | 1 cut(s) | 1034 |
| TseI | GCWGC | 5 cut(s) | 413, 668, 810, 998, 1217 |
| Tsp45I | GTSAC | 1 cut(s) | 1034 |
| TspDTI | ATGAA | 3 cut(s) | 299, 555, 921 |
| TspGWI | ACGGA | 2 cut(s) | 749, 1098 |
| TspRI | CASTG | 4 cut(s) | 414, 612, 660, 865 |
| Vha464I | CTTAAG | 1 cut(s) | 938 |
| VpaK11BI | GGWCC | 4 cut(s) | 149, 384, 467, 841 |
| XbaI | TCTAGA | 1 cut(s) | 1132 |
| XceI | RCATGY | 2 cut(s) | 374, 973 |
| XhoI | CTCGAG | 1 cut(s) | 1188 |
| XspI | CTAG | 5 cut(s) | 192, 248, 632, 1133, 1226 |
| ZraI | GACGTC | 1 cut(s) | 819 |