Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003866

Physical Location & Seq

Genomic Coordinates Forward (+)

29903155 .. 29908549

Gene Structure 5395 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0292300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGGATGCCAAGGACATCTTGGGTTTGCCCAAAACCACGCATCCCCTATCGCAGGAGAAGAAATCGCGACCCCCCAAGGAGTCTCAGCGCAAACCCGATGGCATTTCACGCGAGGTCTATGCCCTAATTGGCGGTGTGCCACCTCTCATGCCTGCAATTGAGCCCTCGCAGCTCAAAAAACGCCCTCCATCAGATGAGAAGATCACTTGGCAGTGGCTTCCTTTTACGAATTCTGCTCGGAAAGATGACTTGCAGCTTTACCATTGGGTTAGAGTTGTCAATGGTGCCCCACCTACTGGTGACTACTCCTTTGCCAAGTATAACAAGTCTGTCGATATTATCAAATACACTGACGAGGAGTATGATAAGTATTTGACTGATCCTATGTGGACAAAAGAGGAGACCGATCAGTTGTTTGACTTGTGTCAACAGTTTGATCTCCGCTTCATTGTGATAGCAGACAGGTTCCCATCATCTCGTACTGTGGAGGAATTAAAGCATCGATATTACAGCGTCTCTCGACATATATTAATTGCTAGAGCAGCATCGCCCGCAGATGTATCAGGGCACCCTCTTGTTAAGGAACCGTACAAAGTTACACAAGAGAAAGAGCGCAAGAGAGCACTATCCATGGTCCTTTCTCAAACAAAAAATCAAGAGCGAAAAGATGCGGAGGTTCTTGCTGAAGCCAAGAGAATAGCCGAGTCACGTGCACGCATGGTTGCAAGGAGTGCTAGAGAGTTGGAGTTGCCTGTCACATTCAATGATGAGAGGGGTATTGTTCCTGGTGAAAGTATATCACCATTATCCAGCACTGTTGCACCTTCAACTTCGATGGATAATACTTCCACTCTAGGCACTCTTCGCTTGCTTCGAGTGTATCTTAGAACGTACGCACTTGACCAGATGATCATAGCTGCAAGCTCTTCTGCTGGACTTCGGACTATCAAGCGTGTTGAGCAAAGTTTACAAGAACTTGGGGTTAATTTAAAACCAAGAGTTCCAACTAAAGCTGTTTGTTCGGAGCATCTTGAATTAAGAAAAGAAATACTGACTCTATTGAATCTTCAGAAAGAGTTGCAATATAAGGAGGCAGATGGTTCATCTTATCGTGACAGTACTTACGAAACACCAGGCACACCGAAGGATCGCACGTTTGTTCCCGACTCAATGATGTTTGGAGGTGAAAGAGTTGTTAAACGAGATCAGAAGCGCAAGGGACCTGGTAGGGTGTCAGAAGCTCCTTCATCACCTGCGCAGTCTAAAAGGCCAAGAAAGTTAAAGGCAACAGATCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010087 GO:0010088 GO:0010089 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_CC_LHEQLE Myb_DNA-binding

Protein Analysis

432

Amino Acids

49.0

Weight (kDa)

9.46

Isoelectric Point (pI)

53.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SANT_DAMP1_like	PF16282	102 - 176	3.5e-31	SANT/Myb-like domain of DAMP1
Myb_DNA-binding	PF00249	129 - 171	7.1e-07	Myb-like DNA-binding domain
DMAP1	PF05499	309 - 371	4.7e-06	DNA methyltransferase 1-associated protein 1 (DMAP1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04030 AT3G04030 AT3G04030 AT3G04030 AT3G04030 AT5G18240 AT5G18240 AT5G18240 AT5G18240 AT5G18240 AT5G18240
fragaria_vesca	FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 FvH4_1g27990
malus_domestica	MD12G1001900.v1.1 MD14G1001600.v1.1
prunus_persica	Prupe.7G001700_v2.0.a1
pyrus_communis	pycom12g00160 pycom49g00110
rosa_chinensis	RchiOBHm_Chr3g0497321
rosa_laevigata	RLG00000022467
rosa_multiflora	Rmu_sc0001329.1_g000016
rosa_roxburghii	Rroxscaffold_6G00388110
rosa_rugosa	Rorug03G0292200 Rorug03G0292300 Rorug03G0292400 Rorug03G0292500
rosa_samantha	Rh3AG335900 Rh3BG374100 Rh3CG370000 Rh3DG371000
rosa_wichuraiana	Rw3G029540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1261
Acc16I	TGCGCA	1 cut(s)	1257
Acc36I	ACCTGC	1 cut(s)	1261
AccB1I	GGYRCC	2 cut(s)	284, 567
AccB7I	CCANNNNNTGG	1 cut(s)	296
AccII	CGCG	2 cut(s)	67, 111
AciI	CCGC	4 cut(s)	132, 442, 552, 671
AclWI	GGATC	2 cut(s)	374, 1155
AcsI	RAATTY	1 cut(s)	229
AcuI	CTGAAG	2 cut(s)	705, 1052
AcvI	CACGTG	1 cut(s)	710
AfaI	GTAC	4 cut(s)	481, 590, 893, 1120
AfiI	CCNNNNNNNGG	2 cut(s)	52, 296
AgsI	TTSAA	4 cut(s)	763, 828, 1034, 1063
AjnI	CCWGG	3 cut(s)	784, 1132, 1222
AluBI	AGCT	6 cut(s)	172, 256, 917, 924, 1013, 1241
AluI	AGCT	6 cut(s)	172, 256, 917, 924, 1013, 1241
Alw21I	GWGCWC	2 cut(s)	625, 715
Alw26I	GTCTC	3 cut(s)	87, 395, 520
Alw44I	GTGCAC	1 cut(s)	711
AlwI	GGATC	2 cut(s)	374, 1155
AoxI	GGCC	1 cut(s)	1268
ApaLI	GTGCAC	1 cut(s)	711
ApeKI	GCWGC	4 cut(s)	169, 253, 542, 917
ApoI	RAATTY	1 cut(s)	229
ArsI	GACNNNNNNTTYG	2 cut(s)	293, 325
AseI	ATTAAT	1 cut(s)	530
AspLEI	GCGC	4 cut(s)	90, 615, 1215, 1258
AspS9I	GGNCC	2 cut(s)	634, 1220
AsuHPI	GGTGA	5 cut(s)	311, 792, 800, 1196, 1242
AvaII	GGWCC	2 cut(s)	634, 1220
BaeGI	GKGCMC	3 cut(s)	289, 570, 715
BanI	GGYRCC	2 cut(s)	284, 567
BanII	GRGCYC	1 cut(s)	165
BbrPI	CACGTG	1 cut(s)	710
Bbv12I	GWGCWC	2 cut(s)	625, 715
BbvI	GCAGC	4 cut(s)	181, 265, 554, 904
BccI	CCATC	5 cut(s)	92, 196, 478, 829, 1091
BcgI	CGANNNNNNTGC	4 cut(s)	101, 135, 692, 726
BciT130I	CCWGG	3 cut(s)	786, 1134, 1224
BclI	TGATCA	1 cut(s)	909
BcoDI	GTCTC	3 cut(s)	87, 395, 520
BfaI	CTAG	3 cut(s)	537, 735, 854
BfmI	CTRYAG	1 cut(s)	1295
BfuAI	ACCTGC	1 cut(s)	1261
BglII	AGATCT	1 cut(s)	1291
BisI	GCNGC	4 cut(s)	170, 254, 543, 918
BlsI	GCNGC	4 cut(s)	171, 255, 544, 919
BmcAI	AGTACT	1 cut(s)	1120
Bme1390I	CCNGG	3 cut(s)	786, 1134, 1224
Bme18I	GGWCC	2 cut(s)	634, 1220
BmgT120I	GGNCC	2 cut(s)	634, 1220
BmiI	GGNNCC	5 cut(s)	286, 467, 569, 585, 1221
BmrFI	CCNGG	3 cut(s)	786, 1134, 1224
BmsI	GCATC	5 cut(s)	49, 508, 554, 658, 1036
BoxI	GACNNNNGTC	1 cut(s)	423
Bsa29I	ATCGAT	1 cut(s)	502
BsaAI	YACGTR	1 cut(s)	710
BsaI	GGTCTC	1 cut(s)	395
BsaJI	CCNNGG	3 cut(s)	9, 75, 630
Bsc4I	CCNNNNNNNGG	2 cut(s)	52, 296
Bse1I	ACTGG	1 cut(s)	301
BseBI	CCWGG	3 cut(s)	786, 1134, 1224
BseCI	ATCGAT	1 cut(s)	502
BseDI	CCNNGG	3 cut(s)	9, 75, 630
BseGI	GGATG	2 cut(s)	10, 40
BseLI	CCNNNNNNNGG	2 cut(s)	52, 296
BseMII	CTCAG	1 cut(s)	98
BseNI	ACTGG	1 cut(s)	301
BseRI	GAGGAG	2 cut(s)	371, 413
BseSI	GKGCMC	3 cut(s)	289, 570, 715
BseXI	GCAGC	4 cut(s)	181, 265, 554, 904
Bsh1236I	CGCG	2 cut(s)	67, 111
BshFI	GGCC	1 cut(s)	1270
BshNI	GGYRCC	2 cut(s)	284, 567
BshVI	ATCGAT	1 cut(s)	502
BsiHKAI	GWGCWC	2 cut(s)	625, 715
BsiWI	CGTACG	1 cut(s)	891
BslFI	GGGAC	1 cut(s)	1233
BslI	CCNNNNNNNGG	2 cut(s)	52, 296
BsmAI	GTCTC	3 cut(s)	87, 395, 520
BsmBI	CGTCTC	1 cut(s)	520
BsmFI	GGGAC	1 cut(s)	1233
BsnI	GGCC	1 cut(s)	1270
Bso31I	GGTCTC	1 cut(s)	395
Bsp1286I	GDGCHC	5 cut(s)	165, 289, 570, 625, 715
Bsp143I	GATC	8 cut(s)	201, 379, 406, 436, 909, 1147, 1204, 1291
Bsp19I	CCATGG	1 cut(s)	630
Bsp68I	TCGCGA	1 cut(s)	67
BspACI	CCGC	4 cut(s)	132, 442, 552, 671
BspANI	GGCC	1 cut(s)	1270
BspCNI	CTCAG	1 cut(s)	97
BspDI	ATCGAT	1 cut(s)	502
BspFNI	CGCG	2 cut(s)	67, 111
BspLI	GGNNCC	5 cut(s)	286, 467, 569, 585, 1221
BspMI	ACCTGC	1 cut(s)	1261
BspPI	GGATC	2 cut(s)	374, 1155
BspQI	GCTCTTC	1 cut(s)	931
BspT107I	GGYRCC	2 cut(s)	284, 567
BspTNI	GGTCTC	1 cut(s)	395
BsrI	ACTGG	1 cut(s)	301
BssECI	CCNNGG	3 cut(s)	9, 75, 630
BssMI	GATC	8 cut(s)	201, 379, 406, 436, 909, 1147, 1204, 1291
BssT1I	CCWWGG	3 cut(s)	9, 75, 630
Bst2UI	CCWGG	3 cut(s)	786, 1134, 1224
Bst4CI	ACNGT	5 cut(s)	432, 484, 588, 817, 1118
Bst6I	CTCTTC	2 cut(s)	867, 931
BstAPI	GCANNNNNTGC	1 cut(s)	731
BstBAI	YACGTR	1 cut(s)	710
BstC8I	GCNNGC	5 cut(s)	153, 552, 715, 869, 922
BstDEI	CTNAG	2 cut(s)	84, 884
BstDSI	CCRYGG	1 cut(s)	630
BstENI	CCTNNNNNAGG	1 cut(s)	50
BstF5I	GGATG	2 cut(s)	10, 40
BstFNI	CGCG	2 cut(s)	67, 111
BstHHI	GCGC	4 cut(s)	90, 615, 1215, 1258
BstKTI	GATC	8 cut(s)	204, 382, 409, 439, 912, 1150, 1207, 1294
BstMAI	GTCTC	3 cut(s)	87, 395, 520
BstMBI	GATC	8 cut(s)	201, 379, 406, 436, 909, 1147, 1204, 1291
BstMWI	GCNNNNNNNGC	7 cut(s)	108, 169, 542, 551, 731, 864, 958
BstNI	CCWGG	3 cut(s)	786, 1134, 1224
BstPAI	GACNNNNGTC	1 cut(s)	423
BstSCI	CCNGG	3 cut(s)	784, 1132, 1222
BstSFI	CTRYAG	1 cut(s)	1295
BstSLI	GKGCMC	3 cut(s)	289, 570, 715
BstUI	CGCG	2 cut(s)	67, 111
BstV1I	GCAGC	4 cut(s)	181, 265, 554, 904
BstX2I	RGATCY	1 cut(s)	1291
BstYI	RGATCY	1 cut(s)	1291
Bsu15I	ATCGAT	1 cut(s)	502
BsuRI	GGCC	1 cut(s)	1270
BsuTUI	ATCGAT	1 cut(s)	502
BtgI	CCRYGG	1 cut(s)	630
BtgZI	GCGATG	1 cut(s)	531
BtsCI	GGATG	2 cut(s)	10, 40
BtsI	GCAGTG	1 cut(s)	218
BtsIMutI	CAGTG	3 cut(s)	218, 348, 813
BtuMI	TCGCGA	1 cut(s)	67
BveI	ACCTGC	1 cut(s)	1261
Cac8I	GCNNGC	5 cut(s)	153, 552, 715, 869, 922
CfoI	GCGC	4 cut(s)	90, 615, 1215, 1258
Cfr13I	GGNCC	2 cut(s)	634, 1220
ClaI	ATCGAT	1 cut(s)	502
CseI	GACGC	1 cut(s)	502
CsiI	ACCWGGT	1 cut(s)	1222
Csp6I	GTAC	4 cut(s)	480, 589, 892, 1119
CviAII	CATG	3 cut(s)	148, 631, 718
CviQI	GTAC	4 cut(s)	480, 589, 892, 1119
DdeI	CTNAG	2 cut(s)	84, 884
DpnI	GATC	8 cut(s)	203, 381, 408, 438, 911, 1149, 1206, 1293
DpnII	GATC	8 cut(s)	201, 379, 406, 436, 909, 1147, 1204, 1291
DraI	TTTAAA	1 cut(s)	990
Eam1104I	CTCTTC	2 cut(s)	867, 931
EarI	CTCTTC	2 cut(s)	867, 931
Eco130I	CCWWGG	3 cut(s)	9, 75, 630
Eco24I	GRGCYC	1 cut(s)	165
Eco31I	GGTCTC	1 cut(s)	395
Eco47I	GGWCC	2 cut(s)	634, 1220
Eco57I	CTGAAG	2 cut(s)	705, 1052
Eco72I	CACGTG	1 cut(s)	710
EcoNI	CCTNNNNNAGG	1 cut(s)	50
EcoO109I	RGGNCCY	1 cut(s)	1220
EcoRI	GAATTC	1 cut(s)	229
EcoRII	CCWGG	3 cut(s)	784, 1132, 1222
EcoT14I	CCWWGG	3 cut(s)	9, 75, 630
EcoT38I	GRGCYC	1 cut(s)	165
ErhI	CCWWGG	3 cut(s)	9, 75, 630
Esp3I	CGTCTC	1 cut(s)	520
FaeI	CATG	3 cut(s)	151, 634, 721
FalI	AAGNNNNNCTT	1 cut(s)	34
FaqI	GGGAC	1 cut(s)	1233
FatI	CATG	3 cut(s)	147, 630, 717
FauI	CCCGC	1 cut(s)	559
FbaI	TGATCA	1 cut(s)	909
Fnu4HI	GCNGC	4 cut(s)	170, 254, 543, 918
FokI	GGATG	2 cut(s)	17, 27
FriOI	GRGCYC	1 cut(s)	165
Fsp4HI	GCNGC	4 cut(s)	170, 254, 543, 918
FspBI	CTAG	3 cut(s)	537, 735, 854
FspI	TGCGCA	1 cut(s)	1257
GlaI	GCGC	4 cut(s)	89, 614, 1214, 1257
GluI	GCNGC	4 cut(s)	170, 254, 543, 918
HaeIII	GGCC	1 cut(s)	1270
HgaI	GACGC	1 cut(s)	502
HhaI	GCGC	4 cut(s)	90, 615, 1215, 1258
Hin1II	CATG	3 cut(s)	151, 634, 721
Hin6I	GCGC	4 cut(s)	88, 613, 1213, 1256
HinP1I	GCGC	4 cut(s)	88, 613, 1213, 1256
HincII	GTYRAC	1 cut(s)	428
HindII	GTYRAC	1 cut(s)	428
HinfI	GANTC	5 cut(s)	80, 704, 1054, 1063, 1166
HphI	GGTGA	5 cut(s)	311, 792, 800, 1196, 1242
Hpy166II	GTNNAC	4 cut(s)	390, 428, 713, 968
Hpy188I	TCNGA	7 cut(s)	193, 240, 942, 1024, 1071, 1209, 1237
Hpy188III	TCNNGA	6 cut(s)	66, 519, 656, 1031, 1112, 1163
Hpy8I	GTNNAC	4 cut(s)	390, 428, 713, 968
HpyAV	CCTTC	3 cut(s)	834, 1138, 1254
HpyCH4III	ACNGT	5 cut(s)	432, 484, 588, 817, 1118
HpyCH4IV	ACGT	3 cut(s)	709, 890, 1154
HpyCH4V	TGCA	7 cut(s)	155, 253, 713, 725, 821, 920, 1081
HpyF10VI	GCNNNNNNNGC	7 cut(s)	108, 169, 542, 551, 731, 864, 958
HpyF3I	CTNAG	2 cut(s)	84, 884
HpySE526I	ACGT	3 cut(s)	709, 890, 1154
Hsp92II	CATG	3 cut(s)	151, 634, 721
HspAI	GCGC	4 cut(s)	88, 613, 1213, 1256
Ksp22I	TGATCA	1 cut(s)	909
Kzo9I	GATC	8 cut(s)	201, 379, 406, 436, 909, 1147, 1204, 1291
LguI	GCTCTTC	1 cut(s)	931
LmnI	GCTCC	2 cut(s)	1024, 1246
Lsp1109I	GCAGC	4 cut(s)	181, 265, 554, 904
LweI	GCATC	5 cut(s)	49, 508, 554, 658, 1036
MabI	ACCWGGT	1 cut(s)	1222
MaeI	CTAG	3 cut(s)	537, 735, 854
MaeII	ACGT	3 cut(s)	709, 890, 1154
MaeIII	GTNAC	5 cut(s)	299, 595, 705, 754, 1112
MalI	GATC	8 cut(s)	203, 381, 408, 438, 911, 1149, 1206, 1293
MboI	GATC	8 cut(s)	201, 379, 406, 436, 909, 1147, 1204, 1291
MboII	GAAGA	5 cut(s)	70, 211, 854, 918, 1058
MfeI	CAATTG	1 cut(s)	156
MflI	RGATCY	1 cut(s)	1291
MhlI	GDGCHC	5 cut(s)	165, 289, 570, 625, 715
MluCI	AATT	7 cut(s)	126, 156, 229, 491, 531, 985, 1034
MlyI	GAGTC	4 cut(s)	89, 713, 1048, 1160
MmeI	TCCRAC	2 cut(s)	723, 1028
MseI	TTAA	8 cut(s)	494, 530, 579, 984, 989, 1037, 1197, 1280
MspR9I	CCNGG	3 cut(s)	786, 1134, 1224
MunI	CAATTG	1 cut(s)	156
MvaI	CCWGG	3 cut(s)	786, 1134, 1224
MvnI	CGCG	2 cut(s)	67, 111
MwoI	GCNNNNNNNGC	7 cut(s)	108, 169, 542, 551, 731, 864, 958
NcoI	CCATGG	1 cut(s)	630
NdeII	GATC	8 cut(s)	201, 379, 406, 436, 909, 1147, 1204, 1291
NlaIII	CATG	3 cut(s)	151, 634, 721
NlaIV	GGNNCC	5 cut(s)	286, 467, 569, 585, 1221
NmeAIII	GCCGAG	1 cut(s)	727
NmuCI	GTSAC	4 cut(s)	299, 705, 754, 1112
NruI	TCGCGA	1 cut(s)	67
NsbI	TGCGCA	1 cut(s)	1257
PaqCI	CACCTGC	1 cut(s)	1261
PciSI	GCTCTTC	1 cut(s)	931
PcsI	WCGNNNNNNNCGW	1 cut(s)	871
PfeI	GAWTC	1 cut(s)	1063
Pfl23II	CGTACG	1 cut(s)	891
PflMI	CCANNNNNTGG	1 cut(s)	296
PkrI	GCNGC	4 cut(s)	171, 255, 544, 919
PleI	GAGTC	4 cut(s)	88, 712, 1048, 1160
PmaCI	CACGTG	1 cut(s)	710
PmlI	CACGTG	1 cut(s)	710
PpsI	GAGTC	4 cut(s)	88, 712, 1048, 1160
Ppu21I	YACGTR	1 cut(s)	710
PpuMI	RGGWCCY	1 cut(s)	1220
PshAI	GACNNNNGTC	1 cut(s)	423
PshBI	ATTAAT	1 cut(s)	530
Psp5II	RGGWCCY	1 cut(s)	1220
Psp6I	CCWGG	3 cut(s)	784, 1132, 1222
PspCI	CACGTG	1 cut(s)	710
PspGI	CCWGG	3 cut(s)	784, 1132, 1222
PspLI	CGTACG	1 cut(s)	891
PspN4I	GGNNCC	5 cut(s)	286, 467, 569, 585, 1221
PspPI	GGNCC	2 cut(s)	634, 1220
PspPPI	RGGWCCY	1 cut(s)	1220
PsuI	RGATCY	1 cut(s)	1291
RruI	TCGCGA	1 cut(s)	67
RsaI	GTAC	4 cut(s)	481, 590, 893, 1120
RsaNI	GTAC	4 cut(s)	480, 589, 892, 1119
SapI	GCTCTTC	1 cut(s)	931
SaqAI	TTAA	8 cut(s)	494, 530, 579, 984, 989, 1037, 1197, 1280
SatI	GCNGC	4 cut(s)	170, 254, 543, 918
Sau3AI	GATC	8 cut(s)	201, 379, 406, 436, 909, 1147, 1204, 1291
Sau96I	GGNCC	2 cut(s)	634, 1220
ScaI	AGTACT	1 cut(s)	1120
SchI	GAGTC	4 cut(s)	89, 713, 1048, 1160
ScrFI	CCNGG	3 cut(s)	786, 1134, 1224
SduI	GDGCHC	5 cut(s)	165, 289, 570, 625, 715
SexAI	ACCWGGT	1 cut(s)	1222
SfaNI	GCATC	5 cut(s)	49, 508, 554, 658, 1036
SfcI	CTRYAG	1 cut(s)	1295
SinI	GGWCC	2 cut(s)	634, 1220
Sse9I	AATT	7 cut(s)	126, 156, 229, 491, 531, 985, 1034
SsiI	CCGC	4 cut(s)	132, 442, 552, 671
SspMI	CTAG	3 cut(s)	537, 735, 854
StyD4I	CCNGG	3 cut(s)	784, 1132, 1222
StyI	CCWWGG	3 cut(s)	9, 75, 630
TaaI	ACNGT	5 cut(s)	432, 484, 588, 817, 1118
TaiI	ACGT	3 cut(s)	712, 893, 1157
TaqI	TCGA	5 cut(s)	333, 502, 520, 833, 874
TaqII	GACCGA	1 cut(s)	419
TasI	AATT	7 cut(s)	126, 156, 229, 491, 531, 985, 1034
TatI	WGTACW	1 cut(s)	1118
TfiI	GAWTC	1 cut(s)	1063
Tru1I	TTAA	8 cut(s)	494, 530, 579, 984, 989, 1037, 1197, 1280
Tru9I	TTAA	8 cut(s)	494, 530, 579, 984, 989, 1037, 1197, 1280
TscAI	CASTG	3 cut(s)	218, 355, 820
TseFI	GTSAC	4 cut(s)	299, 705, 754, 1112
TseI	GCWGC	4 cut(s)	169, 253, 542, 917
Tsp45I	GTSAC	4 cut(s)	299, 705, 754, 1112
TspDTI	ATGAA	3 cut(s)	436, 1092, 1236
TspRI	CASTG	3 cut(s)	218, 355, 820
Van91I	CCANNNNNTGG	1 cut(s)	296
VneI	GTGCAC	1 cut(s)	711
VpaK11BI	GGWCC	2 cut(s)	634, 1220
VspI	ATTAAT	1 cut(s)	530
XagI	CCTNNNNNAGG	1 cut(s)	50
XapI	RAATTY	1 cut(s)	229
XcmI	CCANNNNNNNNNTGG	1 cut(s)	16
XspI	CTAG	3 cut(s)	537, 735, 854
ZrmI	AGTACT	1 cut(s)	1120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.