MYB-CC type transfactor, LHEQLE motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04030 AT3G04030 AT3G04030 AT3G04030 AT3G04030 AT5G18240 AT5G18240 AT5G18240 AT5G18240 AT5G18240 AT5G18240 |
| fragaria_vesca | FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 FvH4_1g27990 |
| malus_domestica | MD12G1001900.v1.1 MD14G1001600.v1.1 |
| prunus_persica | Prupe.7G001700_v2.0.a1 |
| pyrus_communis | pycom12g00160 pycom49g00110 |
| rosa_chinensis | RchiOBHm_Chr3g0497321 |
| rosa_laevigata | RLG00000022467 |
| rosa_multiflora | Rmu_sc0001329.1_g000016 |
| rosa_roxburghii | Rroxscaffold_6G00388110 |
| rosa_rugosa | Rorug03G0292200 Rorug03G0292300 Rorug03G0292400 Rorug03G0292500 |
| rosa_samantha | Rh3AG335900 Rh3BG374100 Rh3CG370000 Rh3DG371000 |
| rosa_wichuraiana | Rw3G029540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 630 |
| AciI | CCGC | 4 cut(s) | 156, 583, 816, 968 |
| AclWI | GGATC | 1 cut(s) | 865 |
| AcuI | CTGAAG | 3 cut(s) | 326, 468, 1321 |
| AfaI | GTAC | 3 cut(s) | 8, 350, 1183 |
| AflIII | ACRYGT | 1 cut(s) | 1026 |
| AgsI | TTSAA | 7 cut(s) | 84, 545, 689, 704, 745, 1308, 1330 |
| AhlI | ACTAGT | 1 cut(s) | 986 |
| AjnI | CCWGG | 3 cut(s) | 307, 645, 936 |
| AleI | CACNNNNGTG | 1 cut(s) | 888 |
| AluBI | AGCT | 9 cut(s) | 253, 692, 715, 763, 837, 1170, 1208, 1270, 1347 |
| AluI | AGCT | 9 cut(s) | 253, 692, 715, 763, 837, 1170, 1208, 1270, 1347 |
| Alw21I | GWGCWC | 3 cut(s) | 473, 482, 765 |
| Alw26I | GTCTC | 3 cut(s) | 612, 644, 1149 |
| AlwI | GGATC | 1 cut(s) | 865 |
| AoxI | GGCC | 3 cut(s) | 169, 270, 310 |
| ApeKI | GCWGC | 9 cut(s) | 19, 22, 692, 811, 837, 964, 1076, 1191, 1262 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 973, 1005 |
| AseI | ATTAAT | 1 cut(s) | 440 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1334 |
| AspLEI | GCGC | 1 cut(s) | 964 |
| AspS9I | GGNCC | 3 cut(s) | 210, 407, 868 |
| AsuHPI | GGTGA | 3 cut(s) | 152, 388, 937 |
| AvaII | GGWCC | 3 cut(s) | 210, 407, 868 |
| BaeGI | GKGCMC | 1 cut(s) | 788 |
| BanII | GRGCYC | 1 cut(s) | 765 |
| BauI | CACGAG | 2 cut(s) | 224, 563 |
| Bbv12I | GWGCWC | 3 cut(s) | 473, 482, 765 |
| BbvCI | CCTCAGC | 1 cut(s) | 789 |
| BbvI | GCAGC | 9 cut(s) | 31, 34, 679, 823, 824, 976, 1063, 1203, 1274 |
| BccI | CCATC | 2 cut(s) | 18, 1125 |
| BciT130I | CCWGG | 3 cut(s) | 309, 647, 938 |
| BciVI | GTATCC | 2 cut(s) | 739, 1232 |
| BcoDI | GTCTC | 3 cut(s) | 612, 644, 1149 |
| BcuI | ACTAGT | 1 cut(s) | 986 |
| BfaI | CTAG | 6 cut(s) | 198, 530, 656, 987, 1092, 1271 |
| BfmI | CTRYAG | 3 cut(s) | 131, 623, 1077 |
| BfuAI | ACCTGC | 1 cut(s) | 630 |
| BfuI | GTATCC | 2 cut(s) | 739, 1232 |
| BlpI | GCTNAGC | 1 cut(s) | 356 |
| Bme1390I | CCNGG | 3 cut(s) | 309, 647, 938 |
| Bme18I | GGWCC | 3 cut(s) | 210, 407, 868 |
| BmgT120I | GGNCC | 3 cut(s) | 210, 407, 868 |
| BmiI | GGNNCC | 1 cut(s) | 212 |
| BmrFI | CCNGG | 3 cut(s) | 309, 647, 938 |
| BmsI | GCATC | 5 cut(s) | 87, 178, 525, 1042, 1288 |
| BoxI | GACNNNNGTC | 1 cut(s) | 932 |
| BpmI | CTGGAG | 1 cut(s) | 656 |
| Bpu10I | CCTNAGC | 1 cut(s) | 789 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 356 |
| BpuEI | CTTGAG | 3 cut(s) | 593, 594, 1218 |
| Bsa29I | ATCGAT | 2 cut(s) | 95, 1140 |
| BsaBI | GATNNNNATC | 2 cut(s) | 442, 1243 |
| BsaJI | CCNNGG | 2 cut(s) | 46, 645 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 366, 396 |
| Bse1I | ACTGG | 4 cut(s) | 387, 410, 416, 487 |
| Bse3DI | GCAATG | 1 cut(s) | 486 |
| Bse8I | GATNNNNATC | 2 cut(s) | 442, 1243 |
| BseBI | CCWGG | 3 cut(s) | 309, 647, 938 |
| BseCI | ATCGAT | 2 cut(s) | 95, 1140 |
| BseDI | CCNNGG | 2 cut(s) | 46, 645 |
| BseGI | GGATG | 1 cut(s) | 60 |
| BseJI | GATNNNNATC | 2 cut(s) | 442, 1243 |
| BseMI | GCAATG | 1 cut(s) | 486 |
| BseMII | CTCAG | 3 cut(s) | 702, 803, 1173 |
| BseNI | ACTGG | 4 cut(s) | 387, 410, 416, 487 |
| BseRI | GAGGAG | 1 cut(s) | 273 |
| BseSI | GKGCMC | 1 cut(s) | 788 |
| BseXI | GCAGC | 9 cut(s) | 31, 34, 679, 823, 824, 976, 1063, 1203, 1274 |
| BshFI | GGCC | 3 cut(s) | 171, 272, 312 |
| BshVI | ATCGAT | 2 cut(s) | 95, 1140 |
| BsiHKAI | GWGCWC | 3 cut(s) | 473, 482, 765 |
| BsiWI | CGTACG | 1 cut(s) | 1181 |
| BsmAI | GTCTC | 3 cut(s) | 612, 644, 1149 |
| BsmBI | CGTCTC | 1 cut(s) | 644 |
| BsnI | GGCC | 3 cut(s) | 171, 272, 312 |
| Bsp1286I | GDGCHC | 4 cut(s) | 473, 482, 765, 788 |
| Bsp143I | GATC | 5 cut(s) | 57, 217, 857, 874, 1244 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 356 |
| BspACI | CCGC | 4 cut(s) | 156, 583, 816, 968 |
| BspANI | GGCC | 3 cut(s) | 171, 272, 312 |
| BspCNI | CTCAG | 3 cut(s) | 703, 802, 1172 |
| BspDI | ATCGAT | 2 cut(s) | 95, 1140 |
| BspHI | TCATGA | 1 cut(s) | 1285 |
| BspLI | GGNNCC | 1 cut(s) | 212 |
| BspMAI | CTGCAG | 2 cut(s) | 627, 1081 |
| BspMI | ACCTGC | 1 cut(s) | 630 |
| BspPI | GGATC | 1 cut(s) | 865 |
| BsrDI | GCAATG | 1 cut(s) | 486 |
| BsrI | ACTGG | 4 cut(s) | 387, 410, 416, 487 |
| BssECI | CCNNGG | 2 cut(s) | 46, 645 |
| BssMI | GATC | 5 cut(s) | 57, 217, 857, 874, 1244 |
| BssSI | CACGAG | 2 cut(s) | 224, 563 |
| BssT1I | CCWWGG | 1 cut(s) | 46 |
| Bst2BI | CACGAG | 2 cut(s) | 224, 563 |
| Bst2UI | CCWGG | 3 cut(s) | 309, 647, 938 |
| Bst4CI | ACNGT | 3 cut(s) | 286, 727, 1320 |
| Bst6I | CTCTTC | 4 cut(s) | 73, 115, 754, 1147 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 631 |
| BstC8I | GCNNGC | 2 cut(s) | 512, 816 |
| BstDEI | CTNAG | 6 cut(s) | 356, 670, 711, 789, 902, 1159 |
| BstEII | GGTNACC | 1 cut(s) | 140 |
| BstF5I | GGATG | 1 cut(s) | 60 |
| BstHHI | GCGC | 1 cut(s) | 964 |
| BstKTI | GATC | 5 cut(s) | 60, 220, 860, 877, 1247 |
| BstMAI | GTCTC | 3 cut(s) | 612, 644, 1149 |
| BstMBI | GATC | 5 cut(s) | 57, 217, 857, 874, 1244 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 269, 376, 477, 565, 589, 631, 973, 1205 |
| BstNI | CCWGG | 3 cut(s) | 309, 647, 938 |
| BstNSI | RCATGY | 2 cut(s) | 383, 1030 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 932 |
| BstPI | GGTNACC | 1 cut(s) | 140 |
| BstSCI | CCNGG | 3 cut(s) | 307, 645, 936 |
| BstSFI | CTRYAG | 3 cut(s) | 131, 623, 1077 |
| BstSLI | GKGCMC | 1 cut(s) | 788 |
| BstV1I | GCAGC | 9 cut(s) | 31, 34, 679, 823, 824, 976, 1063, 1203, 1274 |
| Bsu15I | ATCGAT | 2 cut(s) | 95, 1140 |
| BsuI | GTATCC | 2 cut(s) | 739, 1232 |
| BsuRI | GGCC | 3 cut(s) | 171, 272, 312 |
| BsuTUI | ATCGAT | 2 cut(s) | 95, 1140 |
| BtsCI | GGATG | 1 cut(s) | 60 |
| BtsI | GCAGTG | 1 cut(s) | 895 |
| BtsIMutI | CAGTG | 4 cut(s) | 429, 480, 895, 1254 |
| BveI | ACCTGC | 1 cut(s) | 630 |
| Cac8I | GCNNGC | 2 cut(s) | 512, 816 |
| CciI | TCATGA | 1 cut(s) | 1285 |
| CfoI | GCGC | 1 cut(s) | 964 |
| Cfr13I | GGNCC | 3 cut(s) | 210, 407, 868 |
| ClaI | ATCGAT | 2 cut(s) | 95, 1140 |
| CseI | GACGC | 1 cut(s) | 661 |
| Csp6I | GTAC | 3 cut(s) | 7, 349, 1182 |
| CviAII | CATG | 5 cut(s) | 371, 380, 1027, 1105, 1286 |
| CviQI | GTAC | 3 cut(s) | 7, 349, 1182 |
| DdeI | CTNAG | 6 cut(s) | 356, 670, 711, 789, 902, 1159 |
| DpnI | GATC | 5 cut(s) | 59, 219, 859, 876, 1246 |
| DpnII | GATC | 5 cut(s) | 57, 217, 857, 874, 1244 |
| Eam1104I | CTCTTC | 4 cut(s) | 73, 115, 754, 1147 |
| EarI | CTCTTC | 4 cut(s) | 73, 115, 754, 1147 |
| Ecl136II | GAGCTC | 1 cut(s) | 763 |
| Eco130I | CCWWGG | 1 cut(s) | 46 |
| Eco147I | AGGCCT | 2 cut(s) | 171, 312 |
| Eco24I | GRGCYC | 1 cut(s) | 765 |
| Eco47I | GGWCC | 3 cut(s) | 210, 407, 868 |
| Eco53kI | GAGCTC | 1 cut(s) | 763 |
| Eco57I | CTGAAG | 3 cut(s) | 326, 468, 1321 |
| Eco91I | GGTNACC | 1 cut(s) | 140 |
| EcoICRI | GAGCTC | 1 cut(s) | 763 |
| EcoO65I | GGTNACC | 1 cut(s) | 140 |
| EcoRII | CCWGG | 3 cut(s) | 307, 645, 936 |
| EcoT14I | CCWWGG | 1 cut(s) | 46 |
| EcoT38I | GRGCYC | 1 cut(s) | 765 |
| ErhI | CCWWGG | 1 cut(s) | 46 |
| Esp3I | CGTCTC | 1 cut(s) | 644 |
| FaeI | CATG | 5 cut(s) | 374, 383, 1030, 1108, 1289 |
| FatI | CATG | 5 cut(s) | 370, 379, 1026, 1104, 1285 |
| FauI | CCCGC | 2 cut(s) | 163, 823 |
| FokI | GGATG | 1 cut(s) | 47 |
| FriOI | GRGCYC | 1 cut(s) | 765 |
| FspBI | CTAG | 6 cut(s) | 198, 530, 656, 987, 1092, 1271 |
| GlaI | GCGC | 1 cut(s) | 963 |
| GsuI | CTGGAG | 1 cut(s) | 656 |
| HaeIII | GGCC | 3 cut(s) | 171, 272, 312 |
| HgaI | GACGC | 1 cut(s) | 661 |
| HhaI | GCGC | 1 cut(s) | 964 |
| Hin1II | CATG | 5 cut(s) | 374, 383, 1030, 1108, 1289 |
| Hin6I | GCGC | 1 cut(s) | 962 |
| HinP1I | GCGC | 1 cut(s) | 962 |
| HincII | GTYRAC | 1 cut(s) | 992 |
| HindII | GTYRAC | 1 cut(s) | 992 |
| HinfI | GANTC | 8 cut(s) | 164, 201, 304, 334, 364, 605, 1157, 1202 |
| HphI | GGTGA | 3 cut(s) | 152, 388, 937 |
| Hpy166II | GTNNAC | 2 cut(s) | 723, 992 |
| Hpy188I | TCNGA | 7 cut(s) | 115, 345, 448, 465, 712, 879, 1162 |
| Hpy188III | TCNNGA | 2 cut(s) | 550, 1286 |
| Hpy8I | GTNNAC | 2 cut(s) | 723, 992 |
| HpyAV | CCTTC | 4 cut(s) | 549, 763, 848, 1009 |
| HpyCH4III | ACNGT | 3 cut(s) | 286, 727, 1320 |
| HpyCH4IV | ACGT | 1 cut(s) | 1180 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 269, 376, 477, 565, 589, 631, 973, 1205 |
| HpyF3I | CTNAG | 6 cut(s) | 356, 670, 711, 789, 902, 1159 |
| HpySE526I | ACGT | 1 cut(s) | 1180 |
| Hsp92II | CATG | 5 cut(s) | 374, 383, 1030, 1108, 1289 |
| HspAI | GCGC | 1 cut(s) | 962 |
| Kzo9I | GATC | 5 cut(s) | 57, 217, 857, 874, 1244 |
| LmnI | GCTCC | 3 cut(s) | 260, 981, 1344 |
| Lsp1109I | GCAGC | 9 cut(s) | 31, 34, 679, 823, 824, 976, 1063, 1203, 1274 |
| LweI | GCATC | 5 cut(s) | 87, 178, 525, 1042, 1288 |
| MaeI | CTAG | 6 cut(s) | 198, 530, 656, 987, 1092, 1271 |
| MaeII | ACGT | 1 cut(s) | 1180 |
| MaeIII | GTNAC | 4 cut(s) | 140, 382, 925, 1094 |
| MalI | GATC | 5 cut(s) | 59, 219, 859, 876, 1246 |
| MboI | GATC | 5 cut(s) | 57, 217, 857, 874, 1244 |
| MhlI | GDGCHC | 4 cut(s) | 473, 482, 765, 788 |
| MluCI | AATT | 5 cut(s) | 402, 540, 770, 910, 997 |
| MlyI | GAGTC | 4 cut(s) | 195, 343, 614, 1151 |
| MmeI | TCCRAC | 1 cut(s) | 1322 |
| MnlI | CCTC | 9 cut(s) | 188, 232, 251, 368, 404, 568, 798, 909, 1048 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1334 |
| MseI | TTAA | 4 cut(s) | 246, 329, 440, 996 |
| MslI | CAYNNNNRTG | 2 cut(s) | 519, 888 |
| MspA1I | CMGCKG | 2 cut(s) | 583, 837 |
| MspR9I | CCNGG | 3 cut(s) | 309, 647, 938 |
| MvaI | CCWGG | 3 cut(s) | 309, 647, 938 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 269, 376, 477, 565, 589, 631, 973, 1205 |
| NdeII | GATC | 5 cut(s) | 57, 217, 857, 874, 1244 |
| NlaIII | CATG | 5 cut(s) | 374, 383, 1030, 1108, 1289 |
| NlaIV | GGNNCC | 1 cut(s) | 212 |
| NmuCI | GTSAC | 3 cut(s) | 140, 925, 1094 |
| NspI | RCATGY | 2 cut(s) | 383, 1030 |
| OliI | CACNNNNGTG | 1 cut(s) | 888 |
| PagI | TCATGA | 1 cut(s) | 1285 |
| PceI | AGGCCT | 2 cut(s) | 171, 312 |
| PciI | ACATGT | 1 cut(s) | 1026 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1334 |
| PfeI | GAWTC | 4 cut(s) | 164, 304, 364, 1202 |
| Pfl23II | CGTACG | 1 cut(s) | 1181 |
| PfoI | TCCNGGA | 1 cut(s) | 936 |
| PleI | GAGTC | 4 cut(s) | 195, 342, 613, 1151 |
| PpsI | GAGTC | 4 cut(s) | 195, 342, 613, 1151 |
| PscI | ACATGT | 1 cut(s) | 1026 |
| PshAI | GACNNNNGTC | 1 cut(s) | 932 |
| PshBI | ATTAAT | 1 cut(s) | 440 |
| Psp124BI | GAGCTC | 1 cut(s) | 765 |
| Psp6I | CCWGG | 3 cut(s) | 307, 645, 936 |
| PspEI | GGTNACC | 1 cut(s) | 140 |
| PspGI | CCWGG | 3 cut(s) | 307, 645, 936 |
| PspLI | CGTACG | 1 cut(s) | 1181 |
| PspN4I | GGNNCC | 1 cut(s) | 212 |
| PspPI | GGNCC | 3 cut(s) | 210, 407, 868 |
| PstI | CTGCAG | 2 cut(s) | 627, 1081 |
| PvuII | CAGCTG | 1 cut(s) | 837 |
| RsaI | GTAC | 3 cut(s) | 8, 350, 1183 |
| RsaNI | GTAC | 3 cut(s) | 7, 349, 1182 |
| RseI | CAYNNNNRTG | 2 cut(s) | 519, 888 |
| SacI | GAGCTC | 1 cut(s) | 765 |
| SaqAI | TTAA | 4 cut(s) | 246, 329, 440, 996 |
| Sau3AI | GATC | 5 cut(s) | 57, 217, 857, 874, 1244 |
| Sau96I | GGNCC | 3 cut(s) | 210, 407, 868 |
| SchI | GAGTC | 4 cut(s) | 195, 343, 614, 1151 |
| ScrFI | CCNGG | 3 cut(s) | 309, 647, 938 |
| SduI | GDGCHC | 4 cut(s) | 473, 482, 765, 788 |
| SfaNI | GCATC | 5 cut(s) | 87, 178, 525, 1042, 1288 |
| SfcI | CTRYAG | 3 cut(s) | 131, 623, 1077 |
| SinI | GGWCC | 3 cut(s) | 210, 407, 868 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 519, 888 |
| SmlI | CTYRAG | 3 cut(s) | 572, 609, 1233 |
| SmoI | CTYRAG | 3 cut(s) | 572, 609, 1233 |
| SpeI | ACTAGT | 1 cut(s) | 986 |
| Sse9I | AATT | 5 cut(s) | 402, 540, 770, 910, 997 |
| SseBI | AGGCCT | 2 cut(s) | 171, 312 |
| SsiI | CCGC | 4 cut(s) | 156, 583, 816, 968 |
| SspMI | CTAG | 6 cut(s) | 198, 530, 656, 987, 1092, 1271 |
| SstI | GAGCTC | 1 cut(s) | 765 |
| StuI | AGGCCT | 2 cut(s) | 171, 312 |
| StyD4I | CCNGG | 3 cut(s) | 307, 645, 936 |
| StyI | CCWWGG | 1 cut(s) | 46 |
| TaaI | ACNGT | 3 cut(s) | 286, 727, 1320 |
| TaiI | ACGT | 1 cut(s) | 1183 |
| TaqI | TCGA | 3 cut(s) | 95, 860, 1140 |
| TasI | AATT | 5 cut(s) | 402, 540, 770, 910, 997 |
| TatI | WGTACW | 1 cut(s) | 348 |
| TauI | GCSGC | 2 cut(s) | 586, 970 |
| TfiI | GAWTC | 4 cut(s) | 164, 304, 364, 1202 |
| Tru1I | TTAA | 4 cut(s) | 246, 329, 440, 996 |
| Tru9I | TTAA | 4 cut(s) | 246, 329, 440, 996 |
| TscAI | CASTG | 4 cut(s) | 429, 487, 895, 1254 |
| TseFI | GTSAC | 3 cut(s) | 140, 925, 1094 |
| TseI | GCWGC | 9 cut(s) | 19, 22, 692, 811, 837, 964, 1076, 1191, 1262 |
| Tsp45I | GTSAC | 3 cut(s) | 140, 925, 1094 |
| TspDTI | ATGAA | 3 cut(s) | 305, 818, 1028 |
| TspRI | CASTG | 4 cut(s) | 429, 487, 895, 1254 |
| VpaK11BI | GGWCC | 3 cut(s) | 210, 407, 868 |
| VspI | ATTAAT | 1 cut(s) | 440 |
| XceI | RCATGY | 2 cut(s) | 383, 1030 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1334 |
| XspI | CTAG | 6 cut(s) | 198, 530, 656, 987, 1092, 1271 |