Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0004192

Physical Location & Seq

Genomic Coordinates Reverse (-)

31967643 .. 31970243

Gene Structure 2601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1240800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 693 bp

ATGGATGCACTGTTGAAAGCAGCTTCTTCCGAAAAAGACCATCTTTCTGCTTTCCCTGCCTTTCGCCGCCTGTCTGCATTGTTGGAATCAGGACGAGGGGACAAGCTTTCGTCTACCCTAAAGCATTACATACAAAATCTTCTTAAGGCAAATATGGAGGGGCTTTATGGATCTGAGTGGCTGGTGGAGGAGAAGGTGAAGCGCAGGGAGATGGTTGCACCTGAAGCACGTTATATATTTGTACGCGAGGCTTCAAATGCAAGTGCTAGTGACATGTTAACAATGTCGGAGCAGGAAAGGACCTCAGCTAGTTGTGAGGAGAGGGGGCCCATGGTTGGGTTTGTACATTTTCGATTTGTCATAGAGGAAGAATTGCCTGTTCTTTATGTGTATGAATTGCAACTTGAGCCTCGCGTACAAGGGAAAGGTCTGGGGAAGTTCCTAATGCAACTAATTGAGCTAATTGCTCGCAAGAACCACATGGGCGCTGTCGTTCTAACTGTCCAAAAGTCAAACTCGGTAGCCATGAATTTATATTTAAGTAAGATGAGATACATCATATCAACTATATCACCATCACAAGTTGATCCATTGATAGGGATTGAGAAGAGTTATGAAATTCTTTGCAAAGCGTTCAGTAATGAGGCTAAAGCTATCTTGGAGGAACCACTTGAGAAGGTTCATCTGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004402 GO:0004596 GO:0006325 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006996 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010485 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031365 GO:0034212 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0043967 GO:0043968 GO:0043998 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0051276 GO:0051604 GO:0061733 GO:0071704 GO:0071840 GO:1901564 GO:1990189

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

231

Amino Acids

25.94

Weight (kDa)

6.55

Isoelectric Point (pI)

46.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	97 - 179	9.1e-10	Acetyltransferase (GNAT) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18335 AT1G18335 AT1G18335
fragaria_vesca	FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800
malus_domestica	MD06G1234100.v1.1 MD14G1240800.v1.1
prunus_persica	Prupe.5G238600_v2.0.a1 Prupe.5G238600_v2.0.a1 Prupe.5G238600_v2.0.a1
pyrus_communis	pycom06g20880 pycom14g20230
rosa_chinensis	RchiOBHm_Chr7g0177781
rosa_laevigata	RLG00000005504
rosa_multiflora	Rmu_co8374283.1_g000001 Rmu_sc0006214.1_g000013
rosa_roxburghii	Rroxscaffold_3G00275560
rosa_rugosa	Rorug06G0409400
rosa_samantha	Rh7AG009100 Rh7BG009200 Rh7CG009300 Rh7DG009200
rosa_wichuraiana	Rw7G000750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	113
AccII	CGCG	2 cut(s)	246, 414
AciI	CCGC	1 cut(s)	67
AclWI	GGATC	2 cut(s)	178, 581
AcsI	RAATTY	2 cut(s)	529, 618
AcuI	CTGAAG	1 cut(s)	243
AfaI	GTAC	3 cut(s)	243, 345, 417
AfiI	CCNNNNNNNGG	3 cut(s)	335, 336, 596
AflII	CTTAAG	1 cut(s)	143
AflIII	ACRYGT	1 cut(s)	273
AgsI	TTSAA	2 cut(s)	16, 255
AluBI	AGCT	5 cut(s)	23, 106, 308, 460, 653
AluI	AGCT	5 cut(s)	23, 106, 308, 460, 653
AlwI	GGATC	2 cut(s)	178, 581
AoxI	GGCC	1 cut(s)	326
ApaI	GGGCCC	1 cut(s)	330
ApeKI	GCWGC	1 cut(s)	20
ApoI	RAATTY	2 cut(s)	529, 618
AspLEI	GCGC	2 cut(s)	204, 488
AspS9I	GGNCC	3 cut(s)	300, 326, 327
AsuHPI	GGTGA	2 cut(s)	208, 564
AvaII	GGWCC	1 cut(s)	300
BaeGI	GKGCMC	1 cut(s)	330
BanII	GRGCYC	1 cut(s)	330
BbvCI	CCTCAGC	1 cut(s)	304
BbvI	GCAGC	1 cut(s)	32
BccI	CCATC	3 cut(s)	48, 205, 583
BfaI	CTAG	2 cut(s)	267, 309
BfoI	RGCGCY	1 cut(s)	489
BfrI	CTTAAG	1 cut(s)	143
BisI	GCNGC	2 cut(s)	21, 67
BlsI	GCNGC	2 cut(s)	22, 68
Bme18I	GGWCC	1 cut(s)	300
BmgT120I	GGNCC	3 cut(s)	300, 326, 327
BmiI	GGNNCC	3 cut(s)	327, 328, 666
Bpu10I	CCTNAGC	1 cut(s)	304
BpuEI	CTTGAG	2 cut(s)	425, 692
BsaJI	CCNNGG	1 cut(s)	330
Bsc4I	CCNNNNNNNGG	3 cut(s)	335, 336, 596
BseDI	CCNNGG	1 cut(s)	330
BseGI	GGATG	1 cut(s)	10
BseLI	CCNNNNNNNGG	3 cut(s)	335, 336, 596
BseMII	CTCAG	2 cut(s)	165, 318
BseRI	GAGGAG	2 cut(s)	203, 332
BseSI	GKGCMC	1 cut(s)	330
BseXI	GCAGC	1 cut(s)	32
Bsh1236I	CGCG	2 cut(s)	246, 414
BshFI	GGCC	1 cut(s)	328
BslFI	GGGAC	1 cut(s)	113
BslI	CCNNNNNNNGG	3 cut(s)	335, 336, 596
BsmFI	GGGAC	1 cut(s)	113
BsnI	GGCC	1 cut(s)	328
Bsp120I	GGGCCC	1 cut(s)	326
Bsp1286I	GDGCHC	1 cut(s)	330
Bsp1407I	TGTACA	1 cut(s)	343
Bsp143I	GATC	2 cut(s)	170, 586
Bsp19I	CCATGG	1 cut(s)	330
BspACI	CCGC	1 cut(s)	67
BspANI	GGCC	1 cut(s)	328
BspCNI	CTCAG	2 cut(s)	166, 317
BspFNI	CGCG	2 cut(s)	246, 414
BspLI	GGNNCC	3 cut(s)	327, 328, 666
BspPI	GGATC	2 cut(s)	178, 581
BspTI	CTTAAG	1 cut(s)	143
BsrGI	TGTACA	1 cut(s)	343
BssECI	CCNNGG	1 cut(s)	330
BssMI	GATC	2 cut(s)	170, 586
BssT1I	CCWWGG	1 cut(s)	330
Bst4CI	ACNGT	2 cut(s)	12, 502
Bst6I	CTCTTC	1 cut(s)	602
BstAFI	CTTAAG	1 cut(s)	143
BstAUI	TGTACA	1 cut(s)	343
BstC8I	GCNNGC	1 cut(s)	469
BstDEI	CTNAG	2 cut(s)	174, 304
BstDSI	CCRYGG	1 cut(s)	330
BstF5I	GGATG	1 cut(s)	10
BstFNI	CGCG	2 cut(s)	246, 414
BstH2I	RGCGCY	1 cut(s)	489
BstHHI	GCGC	2 cut(s)	204, 488
BstKTI	GATC	2 cut(s)	173, 589
BstMBI	GATC	2 cut(s)	170, 586
BstMWI	GCNNNNNNNGC	4 cut(s)	56, 224, 257, 406
BstNSI	RCATGY	1 cut(s)	277
BstSLI	GKGCMC	1 cut(s)	330
BstUI	CGCG	2 cut(s)	246, 414
BstV1I	GCAGC	1 cut(s)	32
BstX2I	RGATCY	1 cut(s)	170
BstYI	RGATCY	1 cut(s)	170
BsuRI	GGCC	1 cut(s)	328
BtgI	CCRYGG	1 cut(s)	330
BtsCI	GGATG	1 cut(s)	10
BtsIMutI	CAGTG	1 cut(s)	8
Cac8I	GCNNGC	1 cut(s)	469
CfoI	GCGC	2 cut(s)	204, 488
Cfr13I	GGNCC	3 cut(s)	300, 326, 327
Csp6I	GTAC	3 cut(s)	242, 344, 416
CviAII	CATG	4 cut(s)	274, 331, 481, 526
CviQI	GTAC	3 cut(s)	242, 344, 416
DdeI	CTNAG	2 cut(s)	174, 304
DpnI	GATC	2 cut(s)	172, 588
DpnII	GATC	2 cut(s)	170, 586
Eam1104I	CTCTTC	1 cut(s)	602
EarI	CTCTTC	1 cut(s)	602
Eco130I	CCWWGG	1 cut(s)	330
Eco24I	GRGCYC	1 cut(s)	330
Eco47I	GGWCC	1 cut(s)	300
Eco57I	CTGAAG	1 cut(s)	243
EcoO109I	RGGNCCY	2 cut(s)	300, 326
EcoT14I	CCWWGG	1 cut(s)	330
EcoT38I	GRGCYC	1 cut(s)	330
ErhI	CCWWGG	1 cut(s)	330
FaeI	CATG	4 cut(s)	277, 334, 484, 529
FalI	AAGNNNNNCTT	2 cut(s)	27, 59
FaqI	GGGAC	1 cut(s)	113
FatI	CATG	4 cut(s)	273, 330, 480, 525
FblI	GTMKAC	1 cut(s)	113
Fnu4HI	GCNGC	2 cut(s)	21, 67
FokI	GGATG	1 cut(s)	17
FriOI	GRGCYC	1 cut(s)	330
Fsp4HI	GCNGC	2 cut(s)	21, 67
FspBI	CTAG	2 cut(s)	267, 309
GlaI	GCGC	2 cut(s)	203, 487
GluI	GCNGC	2 cut(s)	21, 67
HaeII	RGCGCY	1 cut(s)	489
HaeIII	GGCC	1 cut(s)	328
HhaI	GCGC	2 cut(s)	204, 488
Hin1II	CATG	4 cut(s)	277, 334, 484, 529
Hin6I	GCGC	2 cut(s)	202, 486
HinP1I	GCGC	2 cut(s)	202, 486
HincII	GTYRAC	1 cut(s)	279
HindII	GTYRAC	1 cut(s)	279
HindIII	AAGCTT	1 cut(s)	104
HinfI	GANTC	1 cut(s)	86
HpaI	GTTAAC	1 cut(s)	279
HphI	GGTGA	2 cut(s)	208, 564
Hpy166II	GTNNAC	2 cut(s)	114, 279
Hpy188I	TCNGA	3 cut(s)	31, 175, 289
Hpy188III	TCNNGA	1 cut(s)	90
Hpy8I	GTNNAC	2 cut(s)	114, 279
HpyAV	CCTTC	2 cut(s)	187, 670
HpyCH4III	ACNGT	2 cut(s)	12, 502
HpyCH4IV	ACGT	1 cut(s)	229
HpyCH4V	TGCA	7 cut(s)	8, 77, 218, 260, 400, 448, 627
HpyF10VI	GCNNNNNNNGC	4 cut(s)	56, 224, 257, 406
HpyF3I	CTNAG	2 cut(s)	174, 304
HpySE526I	ACGT	1 cut(s)	229
Hsp92II	CATG	4 cut(s)	277, 334, 484, 529
HspAI	GCGC	2 cut(s)	202, 486
KspAI	GTTAAC	1 cut(s)	279
Kzo9I	GATC	2 cut(s)	170, 586
LmnI	GCTCC	1 cut(s)	289
Lsp1109I	GCAGC	1 cut(s)	32
MaeI	CTAG	2 cut(s)	267, 309
MaeII	ACGT	1 cut(s)	229
MaeIII	GTNAC	1 cut(s)	269
MalI	GATC	2 cut(s)	172, 588
MboI	GATC	2 cut(s)	170, 586
MboII	GAAGA	4 cut(s)	18, 131, 380, 619
MflI	RGATCY	1 cut(s)	170
MhlI	GDGCHC	1 cut(s)	330
MluCI	AATT	6 cut(s)	371, 395, 453, 462, 529, 618
MmeI	TCCRAC	2 cut(s)	63, 267
MseI	TTAA	4 cut(s)	144, 278, 539, 691
MspCI	CTTAAG	1 cut(s)	143
MvnI	CGCG	2 cut(s)	246, 414
MwoI	GCNNNNNNNGC	4 cut(s)	56, 224, 257, 406
NcoI	CCATGG	1 cut(s)	330
NdeII	GATC	2 cut(s)	170, 586
NlaIII	CATG	4 cut(s)	277, 334, 484, 529
NlaIV	GGNNCC	3 cut(s)	327, 328, 666
NmuCI	GTSAC	1 cut(s)	269
NspI	RCATGY	1 cut(s)	277
PciI	ACATGT	1 cut(s)	273
PfeI	GAWTC	1 cut(s)	86
PkrI	GCNGC	2 cut(s)	22, 68
PpuMI	RGGWCCY	1 cut(s)	300
PscI	ACATGT	1 cut(s)	273
Psp5II	RGGWCCY	1 cut(s)	300
PspN4I	GGNNCC	3 cut(s)	327, 328, 666
PspOMI	GGGCCC	1 cut(s)	326
PspPI	GGNCC	3 cut(s)	300, 326, 327
PspPPI	RGGWCCY	1 cut(s)	300
PsuI	RGATCY	1 cut(s)	170
RsaI	GTAC	3 cut(s)	243, 345, 417
RsaNI	GTAC	3 cut(s)	242, 344, 416
SaqAI	TTAA	4 cut(s)	144, 278, 539, 691
SatI	GCNGC	2 cut(s)	21, 67
Sau3AI	GATC	2 cut(s)	170, 586
Sau96I	GGNCC	3 cut(s)	300, 326, 327
SduI	GDGCHC	1 cut(s)	330
SinI	GGWCC	1 cut(s)	300
SmlI	CTYRAG	3 cut(s)	143, 404, 671
SmoI	CTYRAG	3 cut(s)	143, 404, 671
Sse9I	AATT	6 cut(s)	371, 395, 453, 462, 529, 618
SsiI	CCGC	1 cut(s)	67
SspMI	CTAG	2 cut(s)	267, 309
StyI	CCWWGG	1 cut(s)	330
TaaI	ACNGT	2 cut(s)	12, 502
TaiI	ACGT	1 cut(s)	232
TaqI	TCGA	1 cut(s)	352
TasI	AATT	6 cut(s)	371, 395, 453, 462, 529, 618
TatI	WGTACW	1 cut(s)	343
TauI	GCSGC	1 cut(s)	69
TfiI	GAWTC	1 cut(s)	86
Tru1I	TTAA	4 cut(s)	144, 278, 539, 691
Tru9I	TTAA	4 cut(s)	144, 278, 539, 691
TscAI	CASTG	1 cut(s)	15
TseFI	GTSAC	1 cut(s)	269
TseI	GCWGC	1 cut(s)	20
Tsp45I	GTSAC	1 cut(s)	269
TspDTI	ATGAA	4 cut(s)	408, 542, 630, 671
TspRI	CASTG	1 cut(s)	15
Vha464I	CTTAAG	1 cut(s)	143
VpaK11BI	GGWCC	1 cut(s)	300
XapI	RAATTY	2 cut(s)	529, 618
XceI	RCATGY	1 cut(s)	277
XmiI	GTMKAC	1 cut(s)	113
XspI	CTAG	2 cut(s)	267, 309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.