Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0004192

Physical Location & Seq

Genomic Coordinates Reverse (-)

18025617 .. 18029415

Gene Structure 3799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G238600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 795 bp

ATGGAGTCCAAGGGGCTTTCACGCAATAACAGAGAAAACAAGGCTAAGCCGAAGCGCAAAGAGATAATTGAGAAGAGGAAGGCTATGGATGCACTGATAAAAGTAGCTTCTGCCGAAAAGGACTATCTTTCTGCTTTCCCTGCCTTTCGCCATTACCAAATAAGCGGCCTATCTGCATTCTTGGAATCAGGAAGGGGGGACAAGCTCTACTCTCATGTTAAGCAATTCATTCAAAATCTCCTCAAGGCCAATATGGAGGGGCTGTATGGATCTGAGTGGCCTGCGGAAGAGAAGGTGAAGCGCAGGGAGATGGTTGCACCAGAAGCACGTTATGTATTTGTGCGTAACGCTTCAAATGCAAGTTCGGTTGAATTCTTAACAACGTCTGAACGTGAAAAGACCTCAGCTAGTTGTGTAGAAGAGAGGGGCCCCATAGTTGGGTTTGTACATTTTCGCTTTGTCATAGAGGAAGAATTGCCTGTTCTTTATGTTTATGAATTGCAACTCGAGCCTCGCGTACAAGGGAAAGGTCTGGGGAAGTTCCTAATGCAACTAATTGAGCTAATTGCTTGCAAGAACCACATGGGCGCTGTCGTTCTAACTGTTCAAAAAGCAAACTCCGCAGCTTTGAATTTCTATTTATGCAAGATGAGATATGTTACATCGACTATATCACCATCAAGAGTTGATCCATTGATAGGAGTTGAGAAGAGTTATGAAATTCTTTGCAAAACATTTAGTAATGAGGCTAAAGCTATCTTGGAGGAACCACTTGAGCTGGTTCATTCGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004402 GO:0004596 GO:0006325 GO:0006464 GO:0006473 GO:0006474 GO:0006475 GO:0006807 GO:0006996 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010485 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031365 GO:0034212 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0043967 GO:0043968 GO:0043998 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0051276 GO:0051604 GO:0061733 GO:0071704 GO:0071840 GO:1901564 GO:1990189

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

265

Amino Acids

29.92

Weight (kDa)

9.0

Isoelectric Point (pI)

45.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004192)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18335 AT1G18335 AT1G18335
fragaria_vesca	FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800 FvH4_5g17800
malus_domestica	MD06G1234100.v1.1 MD14G1240800.v1.1
prunus_persica	Prupe.5G238600_v2.0.a1 Prupe.5G238600_v2.0.a1 Prupe.5G238600_v2.0.a1
pyrus_communis	pycom06g20880 pycom14g20230
rosa_chinensis	RchiOBHm_Chr7g0177781
rosa_laevigata	RLG00000005504
rosa_multiflora	Rmu_co8374283.1_g000001 Rmu_sc0006214.1_g000013
rosa_roxburghii	Rroxscaffold_3G00275560
rosa_rugosa	Rorug06G0409400
rosa_samantha	Rh7AG009100 Rh7BG009200 Rh7CG009300 Rh7DG009200
rosa_wichuraiana	Rw7G000750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	516
AciI	CCGC	3 cut(s)	165, 284, 621
AclWI	GGATC	2 cut(s)	277, 683
AcsI	RAATTY	3 cut(s)	371, 631, 720
AfaI	GTAC	2 cut(s)	447, 519
AfiI	CCNNNNNNNGG	3 cut(s)	437, 438, 698
AgsI	TTSAA	5 cut(s)	233, 354, 371, 608, 631
AluBI	AGCT	7 cut(s)	107, 205, 407, 562, 626, 755, 778
AluI	AGCT	7 cut(s)	107, 205, 407, 562, 626, 755, 778
AlwI	GGATC	2 cut(s)	277, 683
Ama87I	CYCGRG	1 cut(s)	506
AoxI	GGCC	4 cut(s)	166, 246, 278, 427
ApaI	GGGCCC	1 cut(s)	431
ApeKI	GCWGC	1 cut(s)	623
ApoI	RAATTY	3 cut(s)	371, 631, 720
AspLEI	GCGC	3 cut(s)	57, 303, 590
AspS9I	GGNCC	2 cut(s)	427, 428
AsuHPI	GGTGA	2 cut(s)	307, 666
AvaI	CYCGRG	1 cut(s)	506
BaeGI	GKGCMC	1 cut(s)	431
BanII	GRGCYC	1 cut(s)	431
BbvCI	CCTCAGC	1 cut(s)	403
BbvI	GCAGC	1 cut(s)	635
BccI	CCATC	2 cut(s)	304, 685
BfaI	CTAG	1 cut(s)	408
BfoI	RGCGCY	1 cut(s)	591
BisI	GCNGC	2 cut(s)	166, 624
BlpI	GCTNAGC	1 cut(s)	45
BlsI	GCNGC	2 cut(s)	167, 625
BmeT110I	CYCGRG	1 cut(s)	506
BmgT120I	GGNCC	2 cut(s)	427, 428
BmiI	GGNNCC	4 cut(s)	428, 429, 430, 768
BmsI	GCATC	1 cut(s)	79
Bpu10I	CCTNAGC	1 cut(s)	403
Bpu1102I	GCTNAGC	1 cut(s)	45
BpuEI	CTTGAG	2 cut(s)	227, 794
BsaJI	CCNNGG	1 cut(s)	9
BsaXI	ACNNNNNCTCC	2 cut(s)	248, 278
Bsc4I	CCNNNNNNNGG	3 cut(s)	437, 438, 698
BseDI	CCNNGG	1 cut(s)	9
BseGI	GGATG	1 cut(s)	94
BseLI	CCNNNNNNNGG	3 cut(s)	437, 438, 698
BseMII	CTCAG	2 cut(s)	264, 417
BseRI	GAGGAG	1 cut(s)	230
BseSI	GKGCMC	1 cut(s)	431
BseXI	GCAGC	1 cut(s)	635
Bsh1236I	CGCG	1 cut(s)	516
BshFI	GGCC	4 cut(s)	168, 248, 280, 429
BsiHKCI	CYCGRG	1 cut(s)	506
BslFI	GGGAC	1 cut(s)	212
BslI	CCNNNNNNNGG	3 cut(s)	437, 438, 698
BsmFI	GGGAC	1 cut(s)	212
BsmI	GAATGC	1 cut(s)	176
BsnI	GGCC	4 cut(s)	168, 248, 280, 429
BsoBI	CYCGRG	1 cut(s)	506
Bsp120I	GGGCCC	1 cut(s)	427
Bsp1286I	GDGCHC	1 cut(s)	431
Bsp1407I	TGTACA	1 cut(s)	445
Bsp143I	GATC	2 cut(s)	269, 688
Bsp1720I	GCTNAGC	1 cut(s)	45
BspACI	CCGC	3 cut(s)	165, 284, 621
BspANI	GGCC	4 cut(s)	168, 248, 280, 429
BspCNI	CTCAG	2 cut(s)	265, 416
BspFNI	CGCG	1 cut(s)	516
BspLI	GGNNCC	4 cut(s)	428, 429, 430, 768
BspPI	GGATC	2 cut(s)	277, 683
BsrGI	TGTACA	1 cut(s)	445
BssECI	CCNNGG	1 cut(s)	9
BssMI	GATC	2 cut(s)	269, 688
BssT1I	CCWWGG	1 cut(s)	9
Bst4CI	ACNGT	1 cut(s)	604
Bst6I	CTCTTC	4 cut(s)	68, 282, 414, 704
BstAUI	TGTACA	1 cut(s)	445
BstC8I	GCNNGC	2 cut(s)	282, 571
BstDEI	CTNAG	3 cut(s)	45, 273, 403
BstF5I	GGATG	1 cut(s)	94
BstFNI	CGCG	1 cut(s)	516
BstH2I	RGCGCY	1 cut(s)	591
BstHHI	GCGC	3 cut(s)	57, 303, 590
BstKTI	GATC	2 cut(s)	272, 691
BstMBI	GATC	2 cut(s)	269, 688
BstMWI	GCNNNNNNNGC	6 cut(s)	89, 140, 323, 356, 508, 620
BstSLI	GKGCMC	1 cut(s)	431
BstUI	CGCG	1 cut(s)	516
BstV1I	GCAGC	1 cut(s)	635
BstX2I	RGATCY	1 cut(s)	269
BstYI	RGATCY	1 cut(s)	269
BsuRI	GGCC	4 cut(s)	168, 248, 280, 429
BtsCI	GGATG	1 cut(s)	94
BtsIMutI	CAGTG	1 cut(s)	92
Cac8I	GCNNGC	2 cut(s)	282, 571
CfoI	GCGC	3 cut(s)	57, 303, 590
Cfr13I	GGNCC	2 cut(s)	427, 428
Csp6I	GTAC	2 cut(s)	446, 518
CviAII	CATG	2 cut(s)	215, 583
CviQI	GTAC	2 cut(s)	446, 518
DdeI	CTNAG	3 cut(s)	45, 273, 403
DpnI	GATC	2 cut(s)	271, 690
DpnII	GATC	2 cut(s)	269, 688
Eam1104I	CTCTTC	4 cut(s)	68, 282, 414, 704
EarI	CTCTTC	4 cut(s)	68, 282, 414, 704
Eco130I	CCWWGG	1 cut(s)	9
Eco24I	GRGCYC	1 cut(s)	431
Eco88I	CYCGRG	1 cut(s)	506
EcoO109I	RGGNCCY	2 cut(s)	427, 428
EcoRI	GAATTC	1 cut(s)	371
EcoT14I	CCWWGG	1 cut(s)	9
EcoT38I	GRGCYC	1 cut(s)	431
ErhI	CCWWGG	1 cut(s)	9
FaeI	CATG	2 cut(s)	218, 586
FaqI	GGGAC	1 cut(s)	212
FatI	CATG	2 cut(s)	214, 582
Fnu4HI	GCNGC	2 cut(s)	166, 624
FokI	GGATG	1 cut(s)	101
FriOI	GRGCYC	1 cut(s)	431
Fsp4HI	GCNGC	2 cut(s)	166, 624
FspBI	CTAG	1 cut(s)	408
GlaI	GCGC	3 cut(s)	56, 302, 589
GluI	GCNGC	2 cut(s)	166, 624
HaeII	RGCGCY	1 cut(s)	591
HaeIII	GGCC	4 cut(s)	168, 248, 280, 429
HhaI	GCGC	3 cut(s)	57, 303, 590
Hin1II	CATG	2 cut(s)	218, 586
Hin6I	GCGC	3 cut(s)	55, 301, 588
HinP1I	GCGC	3 cut(s)	55, 301, 588
HinfI	GANTC	2 cut(s)	5, 185
HphI	GGTGA	2 cut(s)	307, 666
Hpy188I	TCNGA	2 cut(s)	274, 388
Hpy188III	TCNNGA	2 cut(s)	189, 681
HpyAV	CCTTC	3 cut(s)	73, 186, 286
HpyCH4III	ACNGT	1 cut(s)	604
HpyCH4IV	ACGT	3 cut(s)	328, 383, 391
HpyCH4V	TGCA	9 cut(s)	92, 176, 317, 359, 502, 550, 573, 645, 729
HpyF10VI	GCNNNNNNNGC	6 cut(s)	89, 140, 323, 356, 508, 620
HpyF3I	CTNAG	3 cut(s)	45, 273, 403
HpySE526I	ACGT	3 cut(s)	328, 383, 391
Hsp92II	CATG	2 cut(s)	218, 586
HspAI	GCGC	3 cut(s)	55, 301, 588
Kzo9I	GATC	2 cut(s)	269, 688
LpnPI	CCDG	8 cut(s)	153, 174, 289, 294, 333, 492, 518, 764
Lsp1109I	GCAGC	1 cut(s)	635
LweI	GCATC	1 cut(s)	79
MaeI	CTAG	1 cut(s)	408
MaeII	ACGT	3 cut(s)	328, 383, 391
MaeIII	GTNAC	2 cut(s)	344, 658
MalI	GATC	2 cut(s)	271, 690
MboI	GATC	2 cut(s)	269, 688
MboII	GAAGA	5 cut(s)	85, 299, 431, 482, 721
MflI	RGATCY	1 cut(s)	269
MhlI	GDGCHC	1 cut(s)	431
MluCI	AATT	9 cut(s)	66, 224, 371, 473, 497, 555, 564, 631, 720
MlyI	GAGTC	1 cut(s)	14
MnlI	CCTC	9 cut(s)	69, 250, 251, 412, 417, 460, 522, 739, 757
MseI	TTAA	3 cut(s)	219, 377, 793
Mva1269I	GAATGC	1 cut(s)	176
MvnI	CGCG	1 cut(s)	516
MwoI	GCNNNNNNNGC	6 cut(s)	89, 140, 323, 356, 508, 620
NdeII	GATC	2 cut(s)	269, 688
NlaIII	CATG	2 cut(s)	218, 586
NlaIV	GGNNCC	4 cut(s)	428, 429, 430, 768
PaeR7I	CTCGAG	1 cut(s)	506
PcsI	WCGNNNNNNNCGW	1 cut(s)	513
PctI	GAATGC	1 cut(s)	176
PfeI	GAWTC	1 cut(s)	185
PkrI	GCNGC	2 cut(s)	167, 625
PleI	GAGTC	1 cut(s)	13
PpsI	GAGTC	1 cut(s)	13
PspN4I	GGNNCC	4 cut(s)	428, 429, 430, 768
PspOMI	GGGCCC	1 cut(s)	427
PspPI	GGNCC	2 cut(s)	427, 428
PspXI	VCTCGAGB	1 cut(s)	506
PsuI	RGATCY	1 cut(s)	269
RsaI	GTAC	2 cut(s)	447, 519
RsaNI	GTAC	2 cut(s)	446, 518
SaqAI	TTAA	3 cut(s)	219, 377, 793
SatI	GCNGC	2 cut(s)	166, 624
Sau3AI	GATC	2 cut(s)	269, 688
Sau96I	GGNCC	2 cut(s)	427, 428
SchI	GAGTC	1 cut(s)	14
SduI	GDGCHC	1 cut(s)	431
SfaNI	GCATC	1 cut(s)	79
Sfr274I	CTCGAG	1 cut(s)	506
SlaI	CTCGAG	1 cut(s)	506
SmlI	CTYRAG	3 cut(s)	242, 506, 773
SmoI	CTYRAG	3 cut(s)	242, 506, 773
Sse9I	AATT	9 cut(s)	66, 224, 371, 473, 497, 555, 564, 631, 720
SsiI	CCGC	3 cut(s)	165, 284, 621
SspMI	CTAG	1 cut(s)	408
StyI	CCWWGG	1 cut(s)	9
TaaI	ACNGT	1 cut(s)	604
TaiI	ACGT	3 cut(s)	331, 386, 394
TaqI	TCGA	2 cut(s)	507, 665
TasI	AATT	9 cut(s)	66, 224, 371, 473, 497, 555, 564, 631, 720
TatI	WGTACW	1 cut(s)	445
TauI	GCSGC	1 cut(s)	168
TfiI	GAWTC	1 cut(s)	185
Tru1I	TTAA	3 cut(s)	219, 377, 793
Tru9I	TTAA	3 cut(s)	219, 377, 793
TscAI	CASTG	1 cut(s)	99
TseI	GCWGC	1 cut(s)	623
TspDTI	ATGAA	4 cut(s)	217, 510, 732, 773
TspRI	CASTG	1 cut(s)	99
XapI	RAATTY	3 cut(s)	371, 631, 720
XhoI	CTCGAG	1 cut(s)	506
XspI	CTAG	1 cut(s)	408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.