Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002777

Physical Location & Seq

Genomic Coordinates Forward (+)

7018420 .. 7023737

Gene Structure 5318 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1100800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2592 bp

ATGGGATGCGGAAACATCTACAAAAGACGCATGAAAGTGTGCACAGTTGCTTTTCTGATATACCTAGATTACAAGGCTCTGCAGCAAAGAGAAAAATGGACTAACAAAACTAAAACAAATGCTTTATGGGAAAATGCGCATAAGCGAAATGCTAAACGTCTTCTCAGTTTGATAGTGGAGTTGGAAGGTTTGTGGGTGAAACTTGGGCAGTATCTGTCTACACGGGCAGATGTACTTCCTGAGGCATACATATGCCTTCTCAAGCAATTACAGGACTCTCTTCCTCCTCGTCCTCTGGAAGAGGTTTGTCAAACTATAAAGAGAGAGTTGGGGAAGTCAATGAATGAGTTGTTCTTAGACTTTGTAGATGTTCCTTTGGCAACAGCATCAATCGCACAAGTCCACCGTGCCACCCTGCTCAACGGGCGGGAAGTAGTTGTTAAAGTTCAACATGAGGGCATCAAGACAATTATATTGGAGGACTTGAAGAATGCAAAGTCAATTGTTGACTGGATAGCATGGGCAGAGCCTCAGTACAATTTTAATCCTATGATGGATGAATGGTGCAAAGAATCTCCCAAAGAGCTTGACTTCAATCATGAAGCTGAGAACACCAGAACAGTGGCTAAAAATCTTGGCTGCGATACCAAATGTGATGATAACACACGTGCCGATCGAGTGGATGTCTTGATTCCAGAGGTTATTCAGTCAACAGAGAAAGTCCTCATTTCAGAGTTTATGGATGGTATTCGTATAAATGACATAGAAGCGCTGGAAGAATTTGGTGTTGACAAACAAAAGGTTGTTGAAGAAATCACACGTGCATATGCCCATCAAATATATGTTGATGGTTTTTTTAATGGAGACCCTCATCCTGGAAACTTTCTTGTGAGCAAGGAACTTCCATATCGTCCTATTTTGCTTGATTTTGGGCTTACAAAGAAATTATCAAGCTCTTTTAAAAAAGCACTTGCAAAGATGTTCTTGGCTTCTACCGAGGGGGACCATGTTGCTCTATTGTCTGCTTTTGCAGAAATGGGACTTAAGTTGCGCCTAGATATTCCAGAGCAGGCAATGGAAATAACAAGTATATTATTCCGAAGTACAACACCTGCCAAAGAGTCTCATGAAACAATGAAATCTTTGGCGGATCAAAGAGCAAAAAACATGAAGGTTATACAGGACAAGATGCAACTTAACCAGAAGGAGGCAAAACGCTTTAATCCTGTAAGTTCATGCATAATGTCCTCCTACCGCTGTGCTTCTCTGCTCTGTTTATTGACTAATTTCATCTATGCTAAAATAGATCCTCGTCCAGTTCAGCCCGACAGCCTTTTCCCAGTTTTTTCTGCTACAAAGGTAATAACGGCTGGAATTTTTATTTGGCGTAGTCACTGGGTGAGTATAGTATGTTTCCATGTTATCCATTCTATTTCCATGTCCATCATGTCCTTAACCATACTCTGGACTGCAAATGCCTGCGCAGACCTCATAGAAAACCCTTTGCTTATCTCAGACTGGGAGGAGTGTTTAAACCGCGTTGCCCTTTCAGAACCTGAGACTGAACCTGGCCAGGAGCAGCTGTATCACTACCTAACTTTTGGTTGGATATGCGGTGGAATCATTGAGCATGCGTCGAAGAGGAAATTCAAGGAGATTCTTGAAGAAGCATTTGTTCGTTCCCTCCAAATAGAAGGGGAGTTTTATATCGGAATACCTCCAGGTGTGGAATCTCGACTTGCAACCCTTACACCCGATACAGAAGAGCTGAAGAAGCTTTCAGGGATTAGGGGTCGTCCTGATATGCCCTCCACTTTCCAGCCAGAGCTCGCAACTGCATTGCCCGTTCTATTTAACATGCTAAACGTTCGTCGTGCCATGATACCTGCAGCTAATGGACATTTCTCAGCCCGTGCACTTGCACGTTACTATGCAGCCTTAGCTGATGACGGTGTTGTTCCACCGCCTCACTCCTCTTACTCTAAGCCAGCTCTTGGTAGCCACCCTCACATTCCCAAATTTCCTGCTCAACCGTCACCAAAACAGCAGAAAGGTAACAGAAGCAAAAAGATAGCTGCTGCTTTTAGGAGTATGAGAACTAGCAAGTATGAGAAGACTCCACAAGATAGCAAGGACCAGGACATTGGTAGTCACAGTAGAAACACAAGCAGCGACAGTAACACTTGCAACGCAAGTGACAACGTGTTGGATGAGATCGTTGTGAATCCTAGTCCTCAAAAGGATGGCGCTAAGATATTTAGCAACCCCAGAATTCGTGATGCTTTCATGGGTGTCGGCGAATATGCACACTTGGTTAAACCAGATGGGAAATTTGGACTGGGATTTAGGAGGTATTATTCCCAGGACGGGTCCCTTATTGGCTTTGGCCACTCAGGAATGGGTGGCTCAACTGCTTTCTGTGACATAAAAAATAGGCTCTCCATTGCTGTAACGTTGAATAAAATGGTGTTTGGTGCAGAGACCGGAAAGATAGTCCACTTCATTTGTTCAGAGTTAAATATTCCAGTGCCGGCGGATTATTTGAGATTCGCAGAAACGGCACCTAGTGATGGAAAACCTCTGATTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1 Beta-lactamase WaaY

Protein Analysis

864

Amino Acids

96.79

Weight (kDa)

7.79

Isoelectric Point (pI)

44.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	89 - 338	2.2e-66	ABC1 atypical kinase-like domain
Beta-lactamase	PF00144	506 - 659	6.9e-09	Beta-lactamase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24810 AT5G24810
fragaria_vesca	FvH4_2g36370 FvH4_2g36370 FvH4_2g36370 FvH4_2g36372
malus_domestica	MD08G1123100.v1.1 MD15G1100800.v1.1 MD15G1102100.v1.1
prunus_persica	Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1
pyrus_communis	pycom08g10200 pycom08g10210 pycom15g09330
rosa_chinensis	RchiOBHm_Chr6g0305511
rosa_laevigata	RLG00000010882 RLG00000010885
rosa_multiflora	Rmu_co8395109.1_g000001 Rmu_sc0001809.1_g000002 Rmu_sc0001809.1_g000004 Rmu_sc0029548.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162720 Rroxscaffold_7G00162740
rosa_rugosa	Rorug06G0340800.1 Rorug06G0341000 Rorug06G0341100
rosa_samantha	Rh6AG453000 Rh6AG453200 Rh6BG448600 Rh6BG448800 Rh6CG466700 Rh6CG467000 Rh6DG453400 Rh6DG453600
rosa_wichuraiana	Rw6G039470 Rw6G039490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1120
Acc16I	TGCGCA	2 cut(s)	138, 1483
Acc36I	ACCTGC	2 cut(s)	1120, 1894
AccB1I	GGYRCC	1 cut(s)	2560
AccB7I	CCANNNNNTGG	2 cut(s)	1464, 1994
AccI	GTMKAC	1 cut(s)	218
AccII	CGCG	1 cut(s)	1539
AciI	CCGC	8 cut(s)	9, 427, 1148, 1255, 1537, 1614, 1964, 2534
AclI	AACGTT	2 cut(s)	1866, 2453
AclWI	GGATC	2 cut(s)	1158, 1301
AcoI	YGGCCR	2 cut(s)	1570, 2386
AcsI	RAATTY	6 cut(s)	779, 1374, 1646, 2018, 2271, 2330
AcuI	CTGAAG	1 cut(s)	1790
AcvI	CACGTG	2 cut(s)	668, 821
AdeI	CACNNNGTG	2 cut(s)	1399, 2567
AfaI	GTAC	3 cut(s)	234, 536, 1105
AfeI	AGCGCT	1 cut(s)	771
AfiI	CCNNNNNNNGG	6 cut(s)	875, 1207, 1464, 1994, 2367, 2570
AflII	CTTAAG	1 cut(s)	1043
AflIII	ACRYGT	3 cut(s)	665, 818, 2202
AgsI	TTSAA	7 cut(s)	449, 487, 595, 809, 1651, 1664, 2458
AjnI	CCWGG	6 cut(s)	874, 1567, 1572, 1720, 2136, 2361
AjuI	GAANNNNNNNTTGG	2 cut(s)	1366, 1398
Alw21I	GWGCWC	3 cut(s)	44, 1830, 1918
Alw26I	GTCTC	4 cut(s)	858, 1128, 1553, 2474
Alw44I	GTGCAC	2 cut(s)	40, 1914
AlwI	GGATC	2 cut(s)	1158, 1301
AlwNI	CAGNNNCTG	2 cut(s)	214, 1556
Aor51HI	AGCGCT	1 cut(s)	771
AoxI	GGCC	2 cut(s)	1570, 2386
ApaLI	GTGCAC	2 cut(s)	40, 1914
ApeKI	GCWGC	8 cut(s)	82, 639, 1579, 1889, 1934, 2075, 2078, 2169
ApoI	RAATTY	6 cut(s)	779, 1374, 1646, 2018, 2271, 2330
AseI	ATTAAT	1 cut(s)	2586
AspLEI	GCGC	5 cut(s)	139, 772, 1053, 1484, 2249
AspS9I	GGNCC	3 cut(s)	1003, 2134, 2370
AsuHPI	GGTGA	3 cut(s)	208, 1411, 2028
AvaII	GGWCC	3 cut(s)	1003, 2134, 2370
AxyI	CCTNAGG	1 cut(s)	240
BaeGI	GKGCMC	2 cut(s)	44, 1918
BalI	TGGCCA	2 cut(s)	1572, 2388
BanI	GGYRCC	1 cut(s)	2560
BanII	GRGCYC	1 cut(s)	1830
BbrPI	CACGTG	2 cut(s)	668, 821
BbsI	GAAGAC	2 cut(s)	152, 2120
Bbv12I	GWGCWC	3 cut(s)	44, 1830, 1918
BbvI	GCAGC	8 cut(s)	94, 626, 1591, 1901, 1946, 2062, 2065, 2181
BccI	CCATC	8 cut(s)	547, 737, 840, 842, 1451, 2237, 2318, 2564
BceAI	ACGGC	2 cut(s)	1383, 2574
BciT130I	CCWGG	6 cut(s)	876, 1569, 1574, 1722, 2138, 2363
BcoDI	GTCTC	4 cut(s)	858, 1128, 1553, 2474
BfaI	CTAG	5 cut(s)	65, 1055, 2100, 2229, 2565
BfmI	CTRYAG	2 cut(s)	80, 1887
BfoI	RGCGCY	2 cut(s)	773, 2250
BfrI	CTTAAG	1 cut(s)	1043
BfuAI	ACCTGC	2 cut(s)	1120, 1894
BisI	GCNGC	8 cut(s)	83, 640, 1580, 1890, 1935, 2076, 2079, 2170
BlsI	GCNGC	8 cut(s)	84, 641, 1581, 1891, 1936, 2077, 2080, 2171
Bme1390I	CCNGG	6 cut(s)	876, 1569, 1574, 1722, 2138, 2363
Bme18I	GGWCC	3 cut(s)	1003, 2134, 2370
BmgT120I	GGNCC	3 cut(s)	1003, 2134, 2370
BmiI	GGNNCC	4 cut(s)	1004, 2371, 2372, 2562
BmrFI	CCNGG	6 cut(s)	876, 1569, 1574, 1722, 2138, 2363
BmrI	ACTGGG	4 cut(s)	1334, 1405, 1528, 2348
BmsI	GCATC	4 cut(s)	395, 468, 1179, 2269
BmuI	ACTGGG	4 cut(s)	1334, 1405, 1528, 2348
BpiI	GAAGAC	2 cut(s)	152, 2120
BpmI	CTGGAG	1 cut(s)	1704
Bpu10I	CCTNAGC	1 cut(s)	1939
BpuEI	CTTGAG	1 cut(s)	245
BsaAI	YACGTR	2 cut(s)	668, 821
BsaI	GGTCTC	2 cut(s)	858, 2474
BsaJI	CCNNGG	2 cut(s)	996, 2361
BsaWI	WCCGGW	1 cut(s)	2483
BsaXI	ACNNNNNCTCC	2 cut(s)	1568, 1598
Bsc4I	CCNNNNNNNGG	6 cut(s)	875, 1207, 1464, 1994, 2367, 2570
Bse118I	RCCGGY	1 cut(s)	2530
Bse1I	ACTGG	7 cut(s)	515, 1316, 1340, 1400, 1523, 2343, 2525
Bse21I	CCTNAGG	1 cut(s)	240
Bse3DI	GCAATG	3 cut(s)	1080, 1838, 2442
BseBI	CCWGG	6 cut(s)	876, 1569, 1574, 1722, 2138, 2363
BseDI	CCNNGG	2 cut(s)	996, 2361
BseGI	GGATG	7 cut(s)	11, 562, 688, 748, 871, 2215, 2248
BseLI	CCNNNNNNNGG	6 cut(s)	875, 1207, 1464, 1994, 2367, 2570
BseMI	GCAATG	3 cut(s)	1080, 1838, 2442
BseMII	CTCAG	8 cut(s)	178, 231, 545, 597, 1527, 1548, 1920, 2406
BseNI	ACTGG	7 cut(s)	515, 1316, 1340, 1400, 1523, 2343, 2525
BseRI	GAGGAG	3 cut(s)	276, 1538, 1963
BseSI	GKGCMC	2 cut(s)	44, 1918
BseXI	GCAGC	8 cut(s)	94, 626, 1591, 1901, 1946, 2062, 2065, 2181
BsgI	GTGCAG	1 cut(s)	2496
Bsh1236I	CGCG	1 cut(s)	1539
Bsh1285I	CGRYCG	1 cut(s)	676
BshFI	GGCC	2 cut(s)	1572, 2388
BshNI	GGYRCC	1 cut(s)	2560
BsiEI	CGRYCG	1 cut(s)	676
BsiHKAI	GWGCWC	3 cut(s)	44, 1830, 1918
BsiSI	CCGG	2 cut(s)	2484, 2531
BslFI	GGGAC	3 cut(s)	1016, 1053, 2356
BslI	CCNNNNNNNGG	6 cut(s)	875, 1207, 1464, 1994, 2367, 2570
BsmAI	GTCTC	4 cut(s)	858, 1128, 1553, 2474
BsmFI	GGGAC	3 cut(s)	1016, 1053, 2356
BsmI	GAATGC	1 cut(s)	496
BsnI	GGCC	2 cut(s)	1572, 2388
Bso31I	GGTCTC	2 cut(s)	858, 2474
Bsp1286I	GDGCHC	3 cut(s)	44, 1830, 1918
Bsp143I	GATC	4 cut(s)	673, 1150, 1306, 2214
BspACI	CCGC	8 cut(s)	9, 427, 1148, 1255, 1537, 1614, 1964, 2534
BspANI	GGCC	2 cut(s)	1572, 2388
BspCNI	CTCAG	8 cut(s)	177, 232, 544, 598, 1526, 1549, 1919, 2405
BspFNI	CGCG	1 cut(s)	1539
BspHI	TCATGA	2 cut(s)	598, 1126
BspLI	GGNNCC	4 cut(s)	1004, 2371, 2372, 2562
BspMAI	CTGCAG	2 cut(s)	84, 1891
BspMI	ACCTGC	2 cut(s)	1120, 1894
BspPI	GGATC	2 cut(s)	1158, 1301
BspQI	GCTCTTC	1 cut(s)	1758
BspT107I	GGYRCC	1 cut(s)	2560
BspTI	CTTAAG	1 cut(s)	1043
BspTNI	GGTCTC	2 cut(s)	858, 2474
BsrDI	GCAATG	3 cut(s)	1080, 1838, 2442
BsrFI	RCCGGY	1 cut(s)	2530
BsrI	ACTGG	7 cut(s)	515, 1316, 1340, 1400, 1523, 2343, 2525
BssAI	RCCGGY	1 cut(s)	2530
BssECI	CCNNGG	2 cut(s)	996, 2361
BssMI	GATC	4 cut(s)	673, 1150, 1306, 2214
Bst2UI	CCWGG	6 cut(s)	876, 1569, 1574, 1722, 2138, 2363
Bst4CI	ACNGT	7 cut(s)	46, 407, 622, 1952, 2034, 2156, 2177
Bst6I	CTCTTC	4 cut(s)	285, 294, 1634, 1758
BstAFI	CTTAAG	1 cut(s)	1043
BstBAI	YACGTR	2 cut(s)	668, 821
BstC8I	GCNNGC	6 cut(s)	1071, 1480, 1632, 1830, 1989, 2532
BstF5I	GGATG	7 cut(s)	11, 562, 688, 748, 871, 2215, 2248
BstFNI	CGCG	1 cut(s)	1539
BstH2I	RGCGCY	2 cut(s)	773, 2250
BstHHI	GCGC	5 cut(s)	139, 772, 1053, 1484, 2249
BstKTI	GATC	4 cut(s)	676, 1153, 1309, 2217
BstMAI	GTCTC	4 cut(s)	858, 1128, 1553, 2474
BstMBI	GATC	4 cut(s)	673, 1150, 1306, 2214
BstMCI	CGRYCG	1 cut(s)	676
BstMWI	GCNNNNNNNGC	5 cut(s)	392, 424, 1774, 1940, 2558
BstNI	CCWGG	6 cut(s)	876, 1569, 1574, 1722, 2138, 2363
BstNSI	RCATGY	2 cut(s)	1634, 1861
BstSCI	CCNGG	6 cut(s)	874, 1567, 1572, 1720, 2136, 2361
BstSFI	CTRYAG	2 cut(s)	80, 1887
BstSLI	GKGCMC	2 cut(s)	44, 1918
BstUI	CGCG	1 cut(s)	1539
BstV1I	GCAGC	8 cut(s)	94, 626, 1591, 1901, 1946, 2062, 2065, 2181
BstV2I	GAAGAC	2 cut(s)	152, 2120
BstX2I	RGATCY	1 cut(s)	1306
BstXI	CCANNNNNNTGG	2 cut(s)	622, 2144
BstYI	RGATCY	1 cut(s)	1306
Bsu36I	CCTNAGG	1 cut(s)	240
BsuRI	GGCC	2 cut(s)	1572, 2388
BtsCI	GGATG	7 cut(s)	11, 562, 688, 748, 871, 2215, 2248
BtsIMutI	CAGTG	3 cut(s)	627, 1393, 2532
BveI	ACCTGC	2 cut(s)	1120, 1894
Cac8I	GCNNGC	6 cut(s)	1071, 1480, 1632, 1830, 1989, 2532
CaiI	CAGNNNCTG	2 cut(s)	214, 1556
CciI	TCATGA	2 cut(s)	598, 1126
CfoI	GCGC	5 cut(s)	139, 772, 1053, 1484, 2249
Cfr10I	RCCGGY	1 cut(s)	2530
Cfr13I	GGNCC	3 cut(s)	1003, 2134, 2370
CseI	GACGC	2 cut(s)	36, 1623
Csp6I	GTAC	3 cut(s)	233, 535, 1104
CspCI	CAANNNNNGTGG	2 cut(s)	2486, 2521
CviQI	GTAC	3 cut(s)	233, 535, 1104
DpnI	GATC	4 cut(s)	675, 1152, 1308, 2216
DpnII	GATC	4 cut(s)	673, 1150, 1306, 2214
DraI	TTTAAA	2 cut(s)	961, 1533
DraIII	CACNNNGTG	2 cut(s)	1399, 2567
EaeI	YGGCCR	2 cut(s)	1570, 2386
Eam1104I	CTCTTC	4 cut(s)	285, 294, 1634, 1758
EarI	CTCTTC	4 cut(s)	285, 294, 1634, 1758
EciI	GGCGGA	2 cut(s)	1163, 2549
Ecl136II	GAGCTC	1 cut(s)	1828
Eco24I	GRGCYC	1 cut(s)	1830
Eco31I	GGTCTC	2 cut(s)	858, 2474
Eco47I	GGWCC	3 cut(s)	1003, 2134, 2370
Eco47III	AGCGCT	1 cut(s)	771
Eco53kI	GAGCTC	1 cut(s)	1828
Eco57I	CTGAAG	1 cut(s)	1790
Eco72I	CACGTG	2 cut(s)	668, 821
Eco81I	CCTNAGG	1 cut(s)	240
EcoICRI	GAGCTC	1 cut(s)	1828
EcoO109I	RGGNCCY	1 cut(s)	2370
EcoRI	GAATTC	1 cut(s)	2271
EcoRII	CCWGG	6 cut(s)	874, 1567, 1572, 1720, 2136, 2361
EcoT22I	ATGCAT	1 cut(s)	1241
EcoT38I	GRGCYC	1 cut(s)	1830
FalI	AAGNNNNNCTT	2 cut(s)	968, 1000
FaqI	GGGAC	3 cut(s)	1016, 1053, 2356
FauI	CCCGC	1 cut(s)	420
FauNDI	CATATG	2 cut(s)	251, 826
FblI	GTMKAC	1 cut(s)	218
Fnu4HI	GCNGC	8 cut(s)	83, 640, 1580, 1890, 1935, 2076, 2079, 2170
FokI	GGATG	7 cut(s)	18, 569, 695, 755, 858, 2222, 2255
FriOI	GRGCYC	1 cut(s)	1830
Fsp4HI	GCNGC	8 cut(s)	83, 640, 1580, 1890, 1935, 2076, 2079, 2170
FspAI	RTGCGCAY	1 cut(s)	138
FspBI	CTAG	5 cut(s)	65, 1055, 2100, 2229, 2565
FspI	TGCGCA	2 cut(s)	138, 1483
GlaI	GCGC	5 cut(s)	138, 771, 1052, 1483, 2248
GluI	GCNGC	8 cut(s)	83, 640, 1580, 1890, 1935, 2076, 2079, 2170
GsuI	CTGGAG	1 cut(s)	1704
HaeII	RGCGCY	2 cut(s)	773, 2250
HaeIII	GGCC	2 cut(s)	1572, 2388
HapII	CCGG	2 cut(s)	2484, 2531
HgaI	GACGC	2 cut(s)	36, 1623
HhaI	GCGC	5 cut(s)	139, 772, 1053, 1484, 2249
Hin6I	GCGC	5 cut(s)	137, 770, 1051, 1482, 2247
HinP1I	GCGC	5 cut(s)	137, 770, 1051, 1482, 2247
HincII	GTYRAC	3 cut(s)	508, 711, 790
HindII	GTYRAC	3 cut(s)	508, 711, 790
HindIII	AAGCTT	1 cut(s)	1775
HpaII	CCGG	2 cut(s)	2484, 2531
HphI	GGTGA	3 cut(s)	208, 1411, 2028
Hpy166II	GTNNAC	8 cut(s)	42, 219, 403, 508, 711, 790, 1916, 2497
Hpy188I	TCNGA	8 cut(s)	57, 733, 1100, 1516, 1552, 1712, 2512, 2583
Hpy8I	GTNNAC	8 cut(s)	42, 219, 403, 508, 711, 790, 1916, 2497
Hpy99I	CGWCG	2 cut(s)	1639, 1875
HpyAV	CCTTC	5 cut(s)	179, 266, 1165, 1198, 1688
HpyCH4III	ACNGT	7 cut(s)	46, 407, 622, 1952, 2034, 2156, 2177
HpyCH4IV	ACGT	7 cut(s)	157, 667, 820, 1866, 1924, 2202, 2453
HpyF10VI	GCNNNNNNNGC	5 cut(s)	392, 424, 1774, 1940, 2558
HpySE526I	ACGT	7 cut(s)	157, 667, 820, 1866, 1924, 2202, 2453
HspAI	GCGC	5 cut(s)	137, 770, 1051, 1482, 2247
KflI	GGGWCCC	1 cut(s)	2370
KroI	GCCGGC	1 cut(s)	2530
KroNI	GCCGGC	1 cut(s)	2532
Kzo9I	GATC	4 cut(s)	673, 1150, 1306, 2214
LguI	GCTCTTC	1 cut(s)	1758
LmnI	GCTCC	1 cut(s)	1576
Lsp1109I	GCAGC	8 cut(s)	94, 626, 1591, 1901, 1946, 2062, 2065, 2181
LweI	GCATC	4 cut(s)	395, 468, 1179, 2269
MaeI	CTAG	5 cut(s)	65, 1055, 2100, 2229, 2565
MaeII	ACGT	7 cut(s)	157, 667, 820, 1866, 1924, 2202, 2453
MaeIII	GTNAC	9 cut(s)	1391, 1925, 2034, 2054, 2150, 2177, 2195, 2420, 2449
MalI	GATC	4 cut(s)	675, 1152, 1308, 2216
MboI	GATC	4 cut(s)	673, 1150, 1306, 2214
MfeI	CAATTG	1 cut(s)	501
MflI	RGATCY	1 cut(s)	1306
MhlI	GDGCHC	3 cut(s)	44, 1830, 1918
MlsI	TGGCCA	2 cut(s)	1572, 2388
MluNI	TGGCCA	2 cut(s)	1572, 2388
MlyI	GAGTC	3 cut(s)	269, 1130, 2110
MmeI	TCCRAC	3 cut(s)	162, 1586, 2187
Mox20I	TGGCCA	2 cut(s)	1572, 2388
Mph1103I	ATGCAT	1 cut(s)	1241
MroNI	GCCGGC	1 cut(s)	2530
MscI	TGGCCA	2 cut(s)	1572, 2388
MslI	CAYNNNNRTG	2 cut(s)	35, 250
Msp20I	TGGCCA	2 cut(s)	1572, 2388
MspA1I	CMGCKG	2 cut(s)	1257, 1582
MspCI	CTTAAG	1 cut(s)	1043
MspI	CCGG	2 cut(s)	2484, 2531
MspR9I	CCNGG	6 cut(s)	876, 1569, 1574, 1722, 2138, 2363
MssI	GTTTAAAC	1 cut(s)	1533
MunI	CAATTG	1 cut(s)	501
Mva1269I	GAATGC	1 cut(s)	496
MvaI	CCWGG	6 cut(s)	876, 1569, 1574, 1722, 2138, 2363
MvnI	CGCG	1 cut(s)	1539
MwoI	GCNNNNNNNGC	5 cut(s)	392, 424, 1774, 1940, 2558
NaeI	GCCGGC	1 cut(s)	2532
NdeI	CATATG	2 cut(s)	251, 826
NdeII	GATC	4 cut(s)	673, 1150, 1306, 2214
NgoMIV	GCCGGC	1 cut(s)	2530
NlaIV	GGNNCC	4 cut(s)	1004, 2371, 2372, 2562
NmuCI	GTSAC	5 cut(s)	1391, 2034, 2150, 2195, 2420
NsbI	TGCGCA	2 cut(s)	138, 1483
NsiI	ATGCAT	1 cut(s)	1241
NspI	RCATGY	2 cut(s)	1634, 1861
PaeI	GCATGC	1 cut(s)	1634
PagI	TCATGA	2 cut(s)	598, 1126
PaqCI	CACCTGC	1 cut(s)	1120
PciSI	GCTCTTC	1 cut(s)	1758
PcsI	WCGNNNNNNNCGW	1 cut(s)	673
PctI	GAATGC	1 cut(s)	496
PdiI	GCCGGC	1 cut(s)	2532
PfeI	GAWTC	7 cut(s)	572, 691, 1620, 1657, 1730, 2224, 2547
PflMI	CCANNNNNTGG	2 cut(s)	1464, 1994
PfoI	TCCNGGA	1 cut(s)	874
PkrI	GCNGC	8 cut(s)	84, 641, 1581, 1891, 1936, 2077, 2080, 2171
Ple19I	CGATCG	1 cut(s)	676
PleI	GAGTC	3 cut(s)	269, 1129, 2110
PmaCI	CACGTG	2 cut(s)	668, 821
PmeI	GTTTAAAC	1 cut(s)	1533
PmlI	CACGTG	2 cut(s)	668, 821
PpsI	GAGTC	3 cut(s)	269, 1129, 2110
Ppu21I	YACGTR	2 cut(s)	668, 821
PpuMI	RGGWCCY	1 cut(s)	2370
PshBI	ATTAAT	1 cut(s)	2586
Psp124BI	GAGCTC	1 cut(s)	1830
Psp1406I	AACGTT	2 cut(s)	1866, 2453
Psp5II	RGGWCCY	1 cut(s)	2370
Psp6I	CCWGG	6 cut(s)	874, 1567, 1572, 1720, 2136, 2361
PspCI	CACGTG	2 cut(s)	668, 821
PspGI	CCWGG	6 cut(s)	874, 1567, 1572, 1720, 2136, 2361
PspN4I	GGNNCC	4 cut(s)	1004, 2371, 2372, 2562
PspPI	GGNCC	3 cut(s)	1003, 2134, 2370
PspPPI	RGGWCCY	1 cut(s)	2370
PstI	CTGCAG	2 cut(s)	84, 1891
PstNI	CAGNNNCTG	2 cut(s)	214, 1556
PsuI	RGATCY	1 cut(s)	1306
PvuI	CGATCG	1 cut(s)	676
PvuII	CAGCTG	1 cut(s)	1582
RsaI	GTAC	3 cut(s)	234, 536, 1105
RsaNI	GTAC	3 cut(s)	233, 535, 1104
RseI	CAYNNNNRTG	2 cut(s)	35, 250
SacI	GAGCTC	1 cut(s)	1830
SapI	GCTCTTC	1 cut(s)	1758
SatI	GCNGC	8 cut(s)	83, 640, 1580, 1890, 1935, 2076, 2079, 2170
Sau3AI	GATC	4 cut(s)	673, 1150, 1306, 2214
Sau96I	GGNCC	3 cut(s)	1003, 2134, 2370
SchI	GAGTC	3 cut(s)	269, 1130, 2110
ScrFI	CCNGG	6 cut(s)	876, 1569, 1574, 1722, 2138, 2363
SduI	GDGCHC	3 cut(s)	44, 1830, 1918
SfaNI	GCATC	4 cut(s)	395, 468, 1179, 2269
SfcI	CTRYAG	2 cut(s)	80, 1887
SinI	GGWCC	3 cut(s)	1003, 2134, 2370
SmiMI	CAYNNNNRTG	2 cut(s)	35, 250
SmlI	CTYRAG	2 cut(s)	260, 1043
SmoI	CTYRAG	2 cut(s)	260, 1043
SphI	GCATGC	1 cut(s)	1634
SsiI	CCGC	8 cut(s)	9, 427, 1148, 1255, 1537, 1614, 1964, 2534
SspI	AATATT	1 cut(s)	2521
SspMI	CTAG	5 cut(s)	65, 1055, 2100, 2229, 2565
SstI	GAGCTC	1 cut(s)	1830
StyD4I	CCNGG	6 cut(s)	874, 1567, 1572, 1720, 2136, 2361
TaaI	ACNGT	7 cut(s)	46, 407, 622, 1952, 2034, 2156, 2177
TaiI	ACGT	7 cut(s)	160, 670, 823, 1869, 1927, 2205, 2456
TaqI	TCGA	3 cut(s)	676, 1637, 1735
TatI	WGTACW	3 cut(s)	232, 534, 1103
TfiI	GAWTC	7 cut(s)	572, 691, 1620, 1657, 1730, 2224, 2547
TscAI	CASTG	3 cut(s)	627, 1400, 2532
TseFI	GTSAC	5 cut(s)	1391, 2034, 2150, 2195, 2420
TseI	GCWGC	8 cut(s)	82, 639, 1579, 1889, 1934, 2075, 2078, 2169
Tsp45I	GTSAC	5 cut(s)	1391, 2034, 2150, 2195, 2420
TspRI	CASTG	3 cut(s)	627, 1400, 2532
Van91I	CCANNNNNTGG	2 cut(s)	1464, 1994
Vha464I	CTTAAG	1 cut(s)	1043
VneI	GTGCAC	2 cut(s)	40, 1914
VpaK11BI	GGWCC	3 cut(s)	1003, 2134, 2370
VspI	ATTAAT	1 cut(s)	2586
XapI	RAATTY	6 cut(s)	779, 1374, 1646, 2018, 2271, 2330
XceI	RCATGY	2 cut(s)	1634, 1861
XmiI	GTMKAC	1 cut(s)	218
XspI	CTAG	5 cut(s)	65, 1055, 2100, 2229, 2565
Zsp2I	ATGCAT	1 cut(s)	1241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.