domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24810 AT5G24810 |
| fragaria_vesca | FvH4_2g36370 FvH4_2g36370 FvH4_2g36370 FvH4_2g36372 |
| malus_domestica | MD08G1123100.v1.1 MD15G1100800.v1.1 MD15G1102100.v1.1 |
| prunus_persica | Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 |
| pyrus_communis | pycom08g10200 pycom08g10210 pycom15g09330 |
| rosa_chinensis | RchiOBHm_Chr6g0305511 |
| rosa_laevigata | RLG00000010882 RLG00000010885 |
| rosa_multiflora | Rmu_co8395109.1_g000001 Rmu_sc0001809.1_g000002 Rmu_sc0001809.1_g000004 Rmu_sc0029548.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00162720 Rroxscaffold_7G00162740 |
| rosa_rugosa | Rorug06G0340800.1 Rorug06G0341000 Rorug06G0341100 |
| rosa_samantha | Rh6AG453000 Rh6AG453200 Rh6BG448600 Rh6BG448800 Rh6CG466700 Rh6CG467000 Rh6DG453400 Rh6DG453600 |
| rosa_wichuraiana | Rw6G039470 Rw6G039490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1429 |
| Acc36I | ACCTGC | 1 cut(s) | 1429 |
| AccB1I | GGYRCC | 3 cut(s) | 2149, 2753, 2806 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1703 |
| AccBSI | CCGCTC | 1 cut(s) | 154 |
| AccI | GTMKAC | 2 cut(s) | 227, 2058 |
| AccII | CGCG | 2 cut(s) | 417, 1273 |
| AciI | CCGC | 6 cut(s) | 154, 1318, 1570, 2049, 2088, 2196 |
| AclWI | GGATC | 7 cut(s) | 1167, 1415, 1559, 1714, 1728, 2426, 2692 |
| AcoI | YGGCCR | 3 cut(s) | 1694, 1867, 2592 |
| AcsI | RAATTY | 6 cut(s) | 889, 1485, 1700, 1943, 2327, 2587 |
| AcuI | CTGAAG | 2 cut(s) | 270, 2087 |
| AcvI | CACGTG | 1 cut(s) | 830 |
| AfaI | GTAC | 3 cut(s) | 1114, 1851, 2608 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 884, 1216, 1703, 2303, 2441, 2516, 2641, 2846 |
| AflII | CTTAAG | 1 cut(s) | 1052 |
| AflIII | ACRYGT | 1 cut(s) | 827 |
| AhlI | ACTAGT | 1 cut(s) | 2426 |
| AjnI | CCWGG | 5 cut(s) | 883, 1249, 1864, 1869, 2017 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 977, 1009, 1624, 1656 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 344, 376 |
| Alw21I | GWGCWC | 2 cut(s) | 148, 2227 |
| Alw26I | GTCTC | 6 cut(s) | 84, 1137, 1336, 1850, 2080, 2828 |
| AlwI | GGATC | 7 cut(s) | 1167, 1415, 1559, 1714, 1728, 2426, 2692 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 223, 1853 |
| Ama87I | CYCGRG | 1 cut(s) | 2671 |
| AoxI | GGCC | 5 cut(s) | 48, 1694, 1867, 2418, 2592 |
| ApeKI | GCWGC | 9 cut(s) | 82, 111, 648, 1541, 2184, 2198, 2243, 2381, 2384 |
| ApoI | RAATTY | 6 cut(s) | 889, 1485, 1700, 1943, 2327, 2587 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2633, 2665 |
| AseI | ATTAAT | 2 cut(s) | 1377, 1785 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 711, 989 |
| AspLEI | GCGC | 3 cut(s) | 419, 1062, 1273 |
| AspS9I | GGNCC | 5 cut(s) | 1012, 1385, 1732, 2419, 2649 |
| AsuC2I | CCSGG | 2 cut(s) | 2499, 2804 |
| AsuHPI | GGTGA | 4 cut(s) | 217, 884, 1265, 2303 |
| AvaI | CYCGRG | 1 cut(s) | 2671 |
| AvaII | GGWCC | 4 cut(s) | 1012, 1385, 1732, 2649 |
| AxyI | CCTNAGG | 1 cut(s) | 2844 |
| BaeGI | GKGCMC | 1 cut(s) | 2670 |
| BalI | TGGCCA | 3 cut(s) | 1696, 1869, 2594 |
| BanI | GGYRCC | 3 cut(s) | 2149, 2753, 2806 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1956, 1988 |
| BbrPI | CACGTG | 1 cut(s) | 830 |
| BbsI | GAAGAC | 1 cut(s) | 2872 |
| Bbv12I | GWGCWC | 2 cut(s) | 148, 2227 |
| BbvCI | CCTCAGC | 2 cut(s) | 1005, 1448 |
| BbvI | GCAGC | 9 cut(s) | 94, 98, 635, 1553, 2196, 2210, 2255, 2368, 2371 |
| BccI | CCATC | 8 cut(s) | 420, 425, 746, 851, 1511, 1743, 2249, 2597 |
| BciT130I | CCWGG | 5 cut(s) | 885, 1251, 1866, 1871, 2019 |
| BclI | TGATCA | 1 cut(s) | 1399 |
| BcnI | CCSGG | 2 cut(s) | 2499, 2804 |
| BcoDI | GTCTC | 6 cut(s) | 84, 1137, 1336, 1850, 2080, 2828 |
| BcuI | ACTAGT | 1 cut(s) | 2426 |
| BfaI | CTAG | 4 cut(s) | 1064, 1331, 1553, 2427 |
| BfmI | CTRYAG | 1 cut(s) | 1539 |
| BfrI | CTTAAG | 1 cut(s) | 1052 |
| BfuAI | ACCTGC | 1 cut(s) | 1429 |
| BisI | GCNGC | 9 cut(s) | 83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385 |
| BlpI | GCTNAGC | 1 cut(s) | 2215 |
| BlsI | GCNGC | 9 cut(s) | 84, 113, 650, 1543, 2186, 2200, 2245, 2383, 2386 |
| Bme1390I | CCNGG | 7 cut(s) | 885, 1251, 1866, 1871, 2019, 2499, 2804 |
| Bme18I | GGWCC | 4 cut(s) | 1012, 1385, 1732, 2649 |
| BmeT110I | CYCGRG | 1 cut(s) | 2671 |
| BmgT120I | GGNCC | 5 cut(s) | 1012, 1385, 1732, 2419, 2649 |
| BmrFI | CCNGG | 7 cut(s) | 885, 1251, 1866, 1871, 2019, 2499, 2804 |
| BmrI | ACTGGG | 3 cut(s) | 1568, 1825, 2445 |
| BmsI | GCATC | 6 cut(s) | 404, 1188, 1231, 1940, 2196, 2548 |
| BmuI | ACTGGG | 3 cut(s) | 1568, 1825, 2445 |
| BpiI | GAAGAC | 1 cut(s) | 2872 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 347, 379 |
| BpmI | CTGGAG | 1 cut(s) | 2001 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1005, 1448 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2215 |
| BpuEI | CTTGAG | 4 cut(s) | 254, 1484, 1691, 2496 |
| BpuMI | CCSGG | 2 cut(s) | 2499, 2804 |
| BsaAI | YACGTR | 1 cut(s) | 830 |
| BsaI | GGTCTC | 2 cut(s) | 1336, 2080 |
| BsaJI | CCNNGG | 2 cut(s) | 1773, 2497 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1485, 1515, 1865, 1895 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 884, 1216, 1703, 2303, 2441, 2516, 2641, 2846 |
| Bse1I | ACTGG | 8 cut(s) | 524, 1574, 1598, 1820, 2040, 2451, 2695, 2767 |
| Bse21I | CCTNAGG | 1 cut(s) | 2844 |
| Bse3DI | GCAATG | 2 cut(s) | 1089, 2209 |
| BseBI | CCWGG | 5 cut(s) | 885, 1251, 1866, 1871, 2019 |
| BseDI | CCNNGG | 2 cut(s) | 1773, 2497 |
| BseGI | GGATG | 9 cut(s) | 11, 697, 757, 880, 2175, 2278, 2345, 2772, 2799 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 884, 1216, 1703, 2303, 2441, 2516, 2641, 2846 |
| BseMI | GCAATG | 2 cut(s) | 1089, 2209 |
| BseNI | ACTGG | 8 cut(s) | 524, 1574, 1598, 1820, 2040, 2451, 2695, 2767 |
| BseRI | GAGGAG | 2 cut(s) | 1835, 2145 |
| BseSI | GKGCMC | 1 cut(s) | 2670 |
| BseXI | GCAGC | 9 cut(s) | 94, 98, 635, 1553, 2196, 2210, 2255, 2368, 2371 |
| BseYI | CCCAGC | 1 cut(s) | 1468 |
| Bsh1236I | CGCG | 2 cut(s) | 417, 1273 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2092 |
| BshFI | GGCC | 5 cut(s) | 50, 1696, 1869, 2420, 2594 |
| BshNI | GGYRCC | 3 cut(s) | 2149, 2753, 2806 |
| BsiEI | CGRYCG | 1 cut(s) | 2092 |
| BsiHKAI | GWGCWC | 2 cut(s) | 148, 2227 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2671 |
| BsiSI | CCGG | 2 cut(s) | 2499, 2804 |
| BslFI | GGGAC | 7 cut(s) | 365, 1025, 1062, 1398, 2135, 2635, 2862 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 884, 1216, 1703, 2303, 2441, 2516, 2641, 2846 |
| BsmAI | GTCTC | 6 cut(s) | 84, 1137, 1336, 1850, 2080, 2828 |
| BsmFI | GGGAC | 7 cut(s) | 365, 1025, 1062, 1398, 2135, 2635, 2862 |
| BsmI | GAATGC | 3 cut(s) | 163, 756, 1967 |
| BsnI | GGCC | 5 cut(s) | 50, 1696, 1869, 2420, 2594 |
| Bso31I | GGTCTC | 2 cut(s) | 1336, 2080 |
| BsoBI | CYCGRG | 1 cut(s) | 2671 |
| Bsp1286I | GDGCHC | 3 cut(s) | 148, 2227, 2670 |
| Bsp143I | GATC | 8 cut(s) | 1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2215 |
| BspACI | CCGC | 6 cut(s) | 154, 1318, 1570, 2049, 2088, 2196 |
| BspANI | GGCC | 5 cut(s) | 50, 1696, 1869, 2420, 2594 |
| BspFNI | CGCG | 2 cut(s) | 417, 1273 |
| BspHI | TCATGA | 3 cut(s) | 148, 607, 1338 |
| BspMAI | CTGCAG | 1 cut(s) | 1543 |
| BspMI | ACCTGC | 1 cut(s) | 1429 |
| BspPI | GGATC | 7 cut(s) | 1167, 1415, 1559, 1714, 1728, 2426, 2692 |
| BspT107I | GGYRCC | 3 cut(s) | 2149, 2753, 2806 |
| BspTI | CTTAAG | 1 cut(s) | 1052 |
| BspTNI | GGTCTC | 2 cut(s) | 1336, 2080 |
| BsrBI | CCGCTC | 1 cut(s) | 154 |
| BsrDI | GCAATG | 2 cut(s) | 1089, 2209 |
| BsrI | ACTGG | 8 cut(s) | 524, 1574, 1598, 1820, 2040, 2451, 2695, 2767 |
| BssECI | CCNNGG | 2 cut(s) | 1773, 2497 |
| BssMI | GATC | 8 cut(s) | 1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684 |
| BssT1I | CCWWGG | 1 cut(s) | 1773 |
| Bst2UI | CCWGG | 5 cut(s) | 885, 1251, 1866, 1871, 2019 |
| Bst4CI | ACNGT | 5 cut(s) | 46, 631, 1099, 2471, 2853 |
| Bst6I | CTCTTC | 3 cut(s) | 270, 294, 2290 |
| BstAFI | CTTAAG | 1 cut(s) | 1052 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 111 |
| BstBAI | YACGTR | 1 cut(s) | 830 |
| BstC8I | GCNNGC | 4 cut(s) | 1080, 1929, 2418, 2575 |
| BstEII | GGTNACC | 1 cut(s) | 872 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2514 |
| BstF5I | GGATG | 9 cut(s) | 11, 697, 757, 880, 2175, 2278, 2345, 2772, 2799 |
| BstFNI | CGCG | 2 cut(s) | 417, 1273 |
| BstHHI | GCGC | 3 cut(s) | 419, 1062, 1273 |
| BstKTI | GATC | 8 cut(s) | 1162, 1402, 1410, 1567, 1709, 1723, 2434, 2687 |
| BstMAI | GTCTC | 6 cut(s) | 84, 1137, 1336, 1850, 2080, 2828 |
| BstMBI | GATC | 8 cut(s) | 1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684 |
| BstMCI | CGRYCG | 1 cut(s) | 2092 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 111, 401, 433, 2591 |
| BstNI | CCWGG | 5 cut(s) | 885, 1251, 1866, 1871, 2019 |
| BstNSI | RCATGY | 3 cut(s) | 1931, 2170, 2323 |
| BstPI | GGTNACC | 1 cut(s) | 872 |
| BstSCI | CCNGG | 7 cut(s) | 883, 1249, 1864, 1869, 2017, 2497, 2802 |
| BstSFI | CTRYAG | 1 cut(s) | 1539 |
| BstSLI | GKGCMC | 1 cut(s) | 2670 |
| BstUI | CGCG | 2 cut(s) | 417, 1273 |
| BstV1I | GCAGC | 9 cut(s) | 94, 98, 635, 1553, 2196, 2210, 2255, 2368, 2371 |
| BstV2I | GAAGAC | 1 cut(s) | 2872 |
| BstX2I | RGATCY | 2 cut(s) | 1407, 1720 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 688, 1757 |
| BstYI | RGATCY | 2 cut(s) | 1407, 1720 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2844 |
| BsuRI | GGCC | 5 cut(s) | 50, 1696, 1869, 2420, 2594 |
| BtgZI | GCGATG | 1 cut(s) | 398 |
| BtsCI | GGATG | 9 cut(s) | 11, 697, 757, 880, 2175, 2278, 2345, 2772, 2799 |
| BtsI | GCAGTG | 1 cut(s) | 1536 |
| BtsIMutI | CAGTG | 4 cut(s) | 51, 636, 1409, 1536 |
| BveI | ACCTGC | 1 cut(s) | 1429 |
| Cac8I | GCNNGC | 4 cut(s) | 1080, 1929, 2418, 2575 |
| CaiI | CAGNNNCTG | 2 cut(s) | 223, 1853 |
| CciI | TCATGA | 3 cut(s) | 148, 607, 1338 |
| CfoI | GCGC | 3 cut(s) | 419, 1062, 1273 |
| Cfr13I | GGNCC | 5 cut(s) | 1012, 1385, 1732, 2419, 2649 |
| Csp6I | GTAC | 3 cut(s) | 1113, 1850, 2607 |
| CviQI | GTAC | 3 cut(s) | 1113, 1850, 2607 |
| DpnI | GATC | 8 cut(s) | 1161, 1401, 1409, 1566, 1708, 1722, 2433, 2686 |
| DpnII | GATC | 8 cut(s) | 1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684 |
| DraI | TTTAAA | 2 cut(s) | 765, 1830 |
| EaeI | YGGCCR | 3 cut(s) | 1694, 1867, 2592 |
| Eam1104I | CTCTTC | 3 cut(s) | 270, 294, 2290 |
| EarI | CTCTTC | 3 cut(s) | 270, 294, 2290 |
| Eco130I | CCWWGG | 1 cut(s) | 1773 |
| Eco31I | GGTCTC | 2 cut(s) | 1336, 2080 |
| Eco32I | GATATC | 2 cut(s) | 1336, 2704 |
| Eco47I | GGWCC | 4 cut(s) | 1012, 1385, 1732, 2649 |
| Eco57I | CTGAAG | 2 cut(s) | 270, 2087 |
| Eco72I | CACGTG | 1 cut(s) | 830 |
| Eco81I | CCTNAGG | 1 cut(s) | 2844 |
| Eco88I | CYCGRG | 1 cut(s) | 2671 |
| Eco91I | GGTNACC | 1 cut(s) | 872 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2514 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2419, 2649 |
| EcoO65I | GGTNACC | 1 cut(s) | 872 |
| EcoRII | CCWGG | 5 cut(s) | 883, 1249, 1864, 1869, 2017 |
| EcoRV | GATATC | 2 cut(s) | 1336, 2704 |
| EcoT14I | CCWWGG | 1 cut(s) | 1773 |
| EcoT22I | ATGCAT | 2 cut(s) | 1246, 1933 |
| ErhI | CCWWGG | 1 cut(s) | 1773 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 115, 147, 977, 1009 |
| FaqI | GGGAC | 7 cut(s) | 365, 1025, 1062, 1398, 2135, 2635, 2862 |
| FauI | CCCGC | 2 cut(s) | 1577, 2203 |
| FauNDI | CATATG | 1 cut(s) | 835 |
| FbaI | TGATCA | 1 cut(s) | 1399 |
| FblI | GTMKAC | 2 cut(s) | 227, 2058 |
| Fnu4HI | GCNGC | 9 cut(s) | 83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385 |
| FokI | GGATG | 9 cut(s) | 18, 704, 764, 867, 2162, 2265, 2332, 2759, 2786 |
| Fsp4HI | GCNGC | 9 cut(s) | 83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385 |
| FspBI | CTAG | 4 cut(s) | 1064, 1331, 1553, 2427 |
| GlaI | GCGC | 3 cut(s) | 418, 1061, 1272 |
| GluI | GCNGC | 9 cut(s) | 83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385 |
| GsaI | CCCAGC | 1 cut(s) | 1472 |
| GsuI | CTGGAG | 1 cut(s) | 2001 |
| HaeIII | GGCC | 5 cut(s) | 50, 1696, 1869, 2420, 2594 |
| HapII | CCGG | 2 cut(s) | 2499, 2804 |
| HhaI | GCGC | 3 cut(s) | 419, 1062, 1273 |
| Hin6I | GCGC | 3 cut(s) | 417, 1060, 1271 |
| HinP1I | GCGC | 3 cut(s) | 417, 1060, 1271 |
| HincII | GTYRAC | 4 cut(s) | 517, 720, 799, 1651 |
| HindII | GTYRAC | 4 cut(s) | 517, 720, 799, 1651 |
| HindIII | AAGCTT | 1 cut(s) | 1667 |
| HpaII | CCGG | 2 cut(s) | 2499, 2804 |
| HphI | GGTGA | 4 cut(s) | 217, 884, 1265, 2303 |
| Hpy166II | GTNNAC | 6 cut(s) | 228, 517, 720, 799, 1651, 2059 |
| Hpy188I | TCNGA | 9 cut(s) | 367, 588, 742, 1292, 1432, 1813, 2067, 2615, 2791 |
| Hpy8I | GTNNAC | 6 cut(s) | 228, 517, 720, 799, 1651, 2059 |
| Hpy99I | CGWCG | 1 cut(s) | 2184 |
| HpyAV | CCTTC | 8 cut(s) | 18, 188, 1174, 1985, 2065, 2115, 2510, 2635 |
| HpyCH4III | ACNGT | 5 cut(s) | 46, 631, 1099, 2471, 2853 |
| HpyCH4IV | ACGT | 3 cut(s) | 829, 1314, 2233 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 111, 401, 433, 2591 |
| HpySE526I | ACGT | 3 cut(s) | 829, 1314, 2233 |
| HspAI | GCGC | 3 cut(s) | 417, 1060, 1271 |
| KflI | GGGWCCC | 1 cut(s) | 2649 |
| Ksp22I | TGATCA | 1 cut(s) | 1399 |
| Kzo9I | GATC | 8 cut(s) | 1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684 |
| LmnI | GCTCC | 1 cut(s) | 1873 |
| Lsp1109I | GCAGC | 9 cut(s) | 94, 98, 635, 1553, 2196, 2210, 2255, 2368, 2371 |
| LweI | GCATC | 6 cut(s) | 404, 1188, 1231, 1940, 2196, 2548 |
| MaeI | CTAG | 4 cut(s) | 1064, 1331, 1553, 2427 |
| MaeII | ACGT | 3 cut(s) | 829, 1314, 2233 |
| MaeIII | GTNAC | 8 cut(s) | 872, 1609, 1635, 2309, 2360, 2474, 2483, 2728 |
| MalI | GATC | 8 cut(s) | 1161, 1401, 1409, 1566, 1708, 1722, 2433, 2686 |
| MbiI | CCGCTC | 1 cut(s) | 154 |
| MboI | GATC | 8 cut(s) | 1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684 |
| MfeI | CAATTG | 1 cut(s) | 510 |
| MflI | RGATCY | 2 cut(s) | 1407, 1720 |
| MhlI | GDGCHC | 3 cut(s) | 148, 2227, 2670 |
| MlsI | TGGCCA | 3 cut(s) | 1696, 1869, 2594 |
| MluNI | TGGCCA | 3 cut(s) | 1696, 1869, 2594 |
| MlyI | GAGTC | 5 cut(s) | 278, 1139, 1284, 1449, 2830 |
| MmeI | TCCRAC | 2 cut(s) | 171, 2835 |
| Mox20I | TGGCCA | 3 cut(s) | 1696, 1869, 2594 |
| Mph1103I | ATGCAT | 2 cut(s) | 1246, 1933 |
| MroXI | GAANNNNTTC | 2 cut(s) | 711, 989 |
| MscI | TGGCCA | 3 cut(s) | 1696, 1869, 2594 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1841, 2804 |
| Msp20I | TGGCCA | 3 cut(s) | 1696, 1869, 2594 |
| MspA1I | CMGCKG | 3 cut(s) | 1544, 1628, 2051 |
| MspCI | CTTAAG | 1 cut(s) | 1052 |
| MspI | CCGG | 2 cut(s) | 2499, 2804 |
| MspR9I | CCNGG | 7 cut(s) | 885, 1251, 1866, 1871, 2019, 2499, 2804 |
| MunI | CAATTG | 1 cut(s) | 510 |
| Mva1269I | GAATGC | 3 cut(s) | 163, 756, 1967 |
| MvaI | CCWGG | 5 cut(s) | 885, 1251, 1866, 1871, 2019 |
| MvnI | CGCG | 2 cut(s) | 417, 1273 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 111, 401, 433, 2591 |
| NciI | CCSGG | 2 cut(s) | 2499, 2804 |
| NdeI | CATATG | 1 cut(s) | 835 |
| NdeII | GATC | 8 cut(s) | 1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684 |
| NmuCI | GTSAC | 4 cut(s) | 872, 1609, 2309, 2474 |
| NsiI | ATGCAT | 2 cut(s) | 1246, 1933 |
| NspI | RCATGY | 3 cut(s) | 1931, 2170, 2323 |
| PaeI | GCATGC | 1 cut(s) | 1931 |
| PagI | TCATGA | 3 cut(s) | 148, 607, 1338 |
| PaqCI | CACCTGC | 1 cut(s) | 1429 |
| PctI | GAATGC | 3 cut(s) | 163, 756, 1967 |
| PdmI | GAANNNNTTC | 2 cut(s) | 711, 989 |
| PfeI | GAWTC | 9 cut(s) | 776, 1355, 1917, 1954, 2010, 2027, 2339, 2550, 2858 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1703 |
| PfoI | TCCNGGA | 1 cut(s) | 883 |
| PkrI | GCNGC | 9 cut(s) | 84, 113, 650, 1543, 2186, 2200, 2245, 2383, 2386 |
| PleI | GAGTC | 5 cut(s) | 278, 1138, 1283, 1449, 2830 |
| PmaCI | CACGTG | 1 cut(s) | 830 |
| PmlI | CACGTG | 1 cut(s) | 830 |
| PpsI | GAGTC | 5 cut(s) | 278, 1138, 1283, 1449, 2830 |
| Ppu21I | YACGTR | 1 cut(s) | 830 |
| PpuMI | RGGWCCY | 1 cut(s) | 2649 |
| PshBI | ATTAAT | 2 cut(s) | 1377, 1785 |
| Psp5II | RGGWCCY | 1 cut(s) | 2649 |
| Psp6I | CCWGG | 5 cut(s) | 883, 1249, 1864, 1869, 2017 |
| PspCI | CACGTG | 1 cut(s) | 830 |
| PspEI | GGTNACC | 1 cut(s) | 872 |
| PspFI | CCCAGC | 1 cut(s) | 1468 |
| PspGI | CCWGG | 5 cut(s) | 883, 1249, 1864, 1869, 2017 |
| PspPI | GGNCC | 5 cut(s) | 1012, 1385, 1732, 2419, 2649 |
| PspPPI | RGGWCCY | 1 cut(s) | 2649 |
| PstI | CTGCAG | 1 cut(s) | 1543 |
| PstNI | CAGNNNCTG | 2 cut(s) | 223, 1853 |
| PsuI | RGATCY | 2 cut(s) | 1407, 1720 |
| PvuII | CAGCTG | 2 cut(s) | 1544, 1628 |
| RsaI | GTAC | 3 cut(s) | 1114, 1851, 2608 |
| RsaNI | GTAC | 3 cut(s) | 1113, 1850, 2607 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1841, 2804 |
| SatI | GCNGC | 9 cut(s) | 83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385 |
| Sau3AI | GATC | 8 cut(s) | 1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684 |
| Sau96I | GGNCC | 5 cut(s) | 1012, 1385, 1732, 2419, 2649 |
| SchI | GAGTC | 5 cut(s) | 278, 1139, 1284, 1449, 2830 |
| ScrFI | CCNGG | 7 cut(s) | 885, 1251, 1866, 1871, 2019, 2499, 2804 |
| SduI | GDGCHC | 3 cut(s) | 148, 2227, 2670 |
| SfaNI | GCATC | 6 cut(s) | 404, 1188, 1231, 1940, 2196, 2548 |
| SfcI | CTRYAG | 1 cut(s) | 1539 |
| SinI | GGWCC | 4 cut(s) | 1012, 1385, 1732, 2649 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1841, 2804 |
| SmlI | CTYRAG | 5 cut(s) | 269, 1052, 1463, 1670, 2511 |
| SmoI | CTYRAG | 5 cut(s) | 269, 1052, 1463, 1670, 2511 |
| SpeI | ACTAGT | 1 cut(s) | 2426 |
| SphI | GCATGC | 1 cut(s) | 1931 |
| SsiI | CCGC | 6 cut(s) | 154, 1318, 1570, 2049, 2088, 2196 |
| SspMI | CTAG | 4 cut(s) | 1064, 1331, 1553, 2427 |
| StyD4I | CCNGG | 7 cut(s) | 883, 1249, 1864, 1869, 2017, 2497, 2802 |
| StyI | CCWWGG | 1 cut(s) | 1773 |
| TaaI | ACNGT | 5 cut(s) | 46, 631, 1099, 2471, 2853 |
| TaiI | ACGT | 3 cut(s) | 832, 1317, 2236 |
| TaqI | TCGA | 6 cut(s) | 66, 319, 597, 625, 2032, 2639 |
| TatI | WGTACW | 1 cut(s) | 1112 |
| TfiI | GAWTC | 9 cut(s) | 776, 1355, 1917, 1954, 2010, 2027, 2339, 2550, 2858 |
| TscAI | CASTG | 4 cut(s) | 51, 636, 1409, 1543 |
| TseFI | GTSAC | 4 cut(s) | 872, 1609, 2309, 2474 |
| TseI | GCWGC | 9 cut(s) | 82, 111, 648, 1541, 2184, 2198, 2243, 2381, 2384 |
| Tsp45I | GTSAC | 4 cut(s) | 872, 1609, 2309, 2474 |
| TspDTI | ATGAA | 9 cut(s) | 47, 582, 606, 624, 1160, 1193, 1325, 1960, 2554 |
| TspGWI | ACGGA | 4 cut(s) | 1097, 1348, 2168, 2220 |
| TspRI | CASTG | 4 cut(s) | 51, 636, 1409, 1543 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1703 |
| Vha464I | CTTAAG | 1 cut(s) | 1052 |
| VpaK11BI | GGWCC | 4 cut(s) | 1012, 1385, 1732, 2649 |
| VspI | ATTAAT | 2 cut(s) | 1377, 1785 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2514 |
| XapI | RAATTY | 6 cut(s) | 889, 1485, 1700, 1943, 2327, 2587 |
| XbaI | TCTAGA | 1 cut(s) | 1330 |
| XceI | RCATGY | 3 cut(s) | 1931, 2170, 2323 |
| XmiI | GTMKAC | 2 cut(s) | 227, 2058 |
| XmnI | GAANNNNTTC | 2 cut(s) | 711, 989 |
| XspI | CTAG | 4 cut(s) | 1064, 1331, 1553, 2427 |
| Zsp2I | ATGCAT | 2 cut(s) | 1246, 1933 |