Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0002777

Physical Location & Seq

Genomic Coordinates Forward (+)

66341084 .. 66347945

Gene Structure 6862 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG448600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2673 bp

ATGAGCGGAATGCTAAACGAGTTCTCAGATGTTCTTCCTGAAGCATATACATCTCTTCTCAAGCAATTACAGGACTCTCTTCCCCCTCGTCCTTTGCAAGAGGTTTCTCGAACTATACAGAAAGAGTTGGGGAAATCAATGGACGAGTTGTTCTCAGATTTTGTCAAAGTCCCTTTGGCAACTGCATCAATAGCACAAGTCCATCGCGCAACCCTGCTTGATGGGCAGGAAGTAGTTGTTAAAGTTCAGCATGAGGGCATTAAGACAATCATATTGGAGGACTTGAAAAACGCAAAGTCAATTGTTGACTGGATAGCATGGGCAGAGCCTCAGTATAATTTTAATCCTATGATAGATGAATGGTGCAAAGAATGTCCGAATGAACTCGACTTCAATCATGAAGCTGAGAATACTCGAACAGTGTCTAAAAATCTTGGCTGCAGAACCAAACATGATGATAACCCAAGTGCCAATAAAGTGGATGTTTTGATACCAGAAGTTATTCAGTCAACAGAAAAAGTCCTCATTTCGGAGTTTATGGATGGCATTCGTTTAAATGACATAGAATCATTTGAAGCATTTGGTGTCAACAAACAAAAGGTTGTTGAAGAAATCACACGTGCATATGCCCACCAAATATATGTTGATGGATTTTTCAATGGTGACCCTCATCCTGGAAATTTTCTTGTGAGCAAGGAACCTCCACATCATCCAATTTTGCTGGACTTTGGACTTACTAAGAAATTATCAAGCTCTGTAAAACAAGCATTAGCGAAGATGTTCTTGGCTTCTGCTGAGGGGGACCATGTTGCTCTATTGTCGGCTTTTGCAGAAATGGGACTTAAGTTGCGCCTAGATATACCAGAGCAGGCAATGGAGATAACAACTGTATTCTTCCGTAGTACAACACCACCAAATGAGTCTCTTGAAACGATGAAAGCTCTGGTGGATCAAAGAGAAAAAAACATGAAGGTCATACAGGACAAGATGCAACTTAACCGAAAAGAGGTTAAACGCTTTAATCCTGTTGATGCATTTCCTGGTGATATTGTGATTTTTGCGCGAGTCCTCAATCTTCTTAGAGGGCTTTCTTCCGTAATGAACGTCCGCATTGTATATCTAGATATCATGAGACCATTTGCTGAATCCGTTTTACAGGGAAGCATTAATAGGGGACCAATGGTAAATGATCAGTGGATCTATGACACACCTGCCCTCTCTGATGTGGAGGCGAAGCTGAGGCGACTCCTACTTGAGCTGGGGAATGATAATAAAATTCTTGGAGTTCAGGTATGTGCCTACAAAGATGGAGAGGTTATTATTGACACTGCAGCTGGAGTGCTAGGTAGATATGATCCTCGCCCAGTTCAGCCTGACAGCCTTTTTCCAGTTTTTTCTGTGACAAAGGGTATAACAGCTGGAATGTTACATTGGCTGGTTGACAAAGGAAAATTGAAGCTTGAGGAAAGTGTTGCAAGTATATGGCCAGAATTTGGATCAAACAGAAAGGATCTCATAAAGGTCCATCATGTGCTGAACCATACATCTGGATTGCACAATGCCTTGGCAGATATTAATAAAGAAAACCCTCTACTTATGTCTGACTGGGAGGAGTGTTTAAATCGCATTTCCATGTCAGTACCTGAGACTGAACCTGGCCAGGAGCAGTTGTATCACTATCTATCTTTTGGGTGGATATGTGGTGGAATCATTGAGCATGCATCAGGGAAAAAATTTAAGGAGATTCTGGAAGAAGCATTCATACACCCCCTACAAATTGAAGGGGAGTTATATATTGGAATCCCTCCAGGTGTGGAATCTCGACTGGCAACCCTAACCGCTGATGTAGACAATCTGAAGAAGGTCTCAGGGATAAGCGGTCGTAAAGATCTACCTTCCACTTTTCAGGGGGGCAACCTTGTGCAAATTGTGAGCATGGTGCCTCCTCTATTTAACATGCTGAACATTCGTCGCAGCATCATTCCTGCAGCTAACGGACATTGCTCAGCCCGTGCTCTTGCACGTTATTATGCAGCCTTAGTTGATGGTGGTGTTGTTCCACCACCTCATCCCTCTTCCTCTAAACCAGCTCTGGGTAGCCACCCTCACATGCCCAAATTTCCTGTTGAATCGTCATCCAAAAAGCGAGGTAACAGAAGCAAGAAATTAGCTGCTGCTTTCAAGTTCAGGACTAAGAAATATGAGCAGGCCCCTACTAGCGATCCCGATATTGGTAGCCCCAGTAGAAACAATAGCAACAGTAGTGACATTAGTAATGCAACTGACCCCGGTTCCATTCCTCAAGAAGGTAATGTCAATAAGATATTCAGCAACCCCAGAATCCATGATGCTTTCATGGGTGCTGGCGAATATGCAAATTTGGCTTGGCCAAATGGTACATTCGGACTTGGGTTCAAGAGATACCACTCGAAGGACGGGTCCCTTATTGGCTTTGGGCACTCGGGCATGGGTGGATCAACTGGCTTCTGTGATATCAAAAATAGGTTTGCTATTTCTGTAACCTTGAATAAAATGTCATTTGGTGCCGAGACTGGAAAAATCATCCATTTTGTTTGTTCGGAGTTAAACATCCCGGTGCCACAGGATTATTTGAGATTTGCAGAGATTCCCCCTGAGGGACAGTTGGATTCTGGAAGACCTTTGATAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1 Beta-lactamase WaaY

Protein Analysis

890

Amino Acids

98.59

Weight (kDa)

6.18

Isoelectric Point (pI)

40.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	22 - 271	3.2e-66	ABC1 atypical kinase-like domain
Beta-lactamase	PF00144	414 - 698	5.9e-42	Beta-lactamase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24810 AT5G24810
fragaria_vesca	FvH4_2g36370 FvH4_2g36370 FvH4_2g36370 FvH4_2g36372
malus_domestica	MD08G1123100.v1.1 MD15G1100800.v1.1 MD15G1102100.v1.1
prunus_persica	Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1
pyrus_communis	pycom08g10200 pycom08g10210 pycom15g09330
rosa_chinensis	RchiOBHm_Chr6g0305511
rosa_laevigata	RLG00000010882 RLG00000010885
rosa_multiflora	Rmu_co8395109.1_g000001 Rmu_sc0001809.1_g000002 Rmu_sc0001809.1_g000004 Rmu_sc0029548.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162720 Rroxscaffold_7G00162740
rosa_rugosa	Rorug06G0340800.1 Rorug06G0341000 Rorug06G0341100
rosa_samantha	Rh6AG453000 Rh6AG453200 Rh6BG448600 Rh6BG448800 Rh6CG466700 Rh6CG467000 Rh6DG453400 Rh6DG453600
rosa_wichuraiana	Rw6G039470 Rw6G039490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1219
Acc36I	ACCTGC	1 cut(s)	1219
AccB1I	GGYRCC	3 cut(s)	1939, 2543, 2596
AccB7I	CCANNNNNTGG	1 cut(s)	1493
AccBSI	CCGCTC	1 cut(s)	6
AccI	GTMKAC	1 cut(s)	1848
AccII	CGCG	2 cut(s)	207, 1063
AciI	CCGC	4 cut(s)	6, 1108, 1839, 1878
AclWI	GGATC	7 cut(s)	957, 1205, 1349, 1504, 1518, 2216, 2482
AcoI	YGGCCR	3 cut(s)	1484, 1657, 2387
AcsI	RAATTY	6 cut(s)	679, 1275, 1490, 1733, 2117, 2377
AcuI	CTGAAG	2 cut(s)	60, 1877
AcvI	CACGTG	1 cut(s)	620
AfaI	GTAC	3 cut(s)	904, 1641, 2398
AfiI	CCNNNNNNNGG	9 cut(s)	529, 674, 1006, 1493, 2093, 2231, 2306, 2431, 2636
AflII	CTTAAG	1 cut(s)	842
AflIII	ACRYGT	1 cut(s)	617
AjnI	CCWGG	5 cut(s)	673, 1039, 1654, 1659, 1807
AjuI	GAANNNNNNNTTGG	4 cut(s)	767, 799, 1414, 1446
AloI	GAACNNNNNNTCC	2 cut(s)	134, 166
Alw21I	GWGCWC	1 cut(s)	2017
Alw26I	GTCTC	5 cut(s)	927, 1126, 1640, 1870, 2543
AlwI	GGATC	7 cut(s)	957, 1205, 1349, 1504, 1518, 2216, 2482
AlwNI	CAGNNNCTG	1 cut(s)	1643
Ama87I	CYCGRG	1 cut(s)	2461
AoxI	GGCC	4 cut(s)	1484, 1657, 2208, 2387
ApeKI	GCWGC	7 cut(s)	438, 1331, 1974, 1988, 2033, 2171, 2174
ApoI	RAATTY	6 cut(s)	679, 1275, 1490, 1733, 2117, 2377
ArsI	GACNNNNNNTTYG	2 cut(s)	2423, 2455
AseI	ATTAAT	2 cut(s)	1167, 1575
Asp700I	GAANNNNTTC	2 cut(s)	501, 779
AspLEI	GCGC	3 cut(s)	209, 852, 1063
AspS9I	GGNCC	5 cut(s)	802, 1175, 1522, 2209, 2439
AsuC2I	CCSGG	2 cut(s)	2289, 2594
AsuHPI	GGTGA	2 cut(s)	674, 1055
AvaI	CYCGRG	1 cut(s)	2461
AvaII	GGWCC	4 cut(s)	802, 1175, 1522, 2439
AxyI	CCTNAGG	1 cut(s)	2634
BaeGI	GKGCMC	1 cut(s)	2460
BalI	TGGCCA	3 cut(s)	1486, 1659, 2389
BanI	GGYRCC	3 cut(s)	1939, 2543, 2596
BarI	GAAGNNNNNNTAC	2 cut(s)	1746, 1778
BbrPI	CACGTG	1 cut(s)	620
BbsI	GAAGAC	1 cut(s)	2662
Bbv12I	GWGCWC	1 cut(s)	2017
BbvCI	CCTCAGC	2 cut(s)	795, 1238
BbvI	GCAGC	7 cut(s)	425, 1343, 1986, 2000, 2045, 2158, 2161
BccI	CCATC	7 cut(s)	210, 215, 536, 641, 1301, 1533, 2039
BciT130I	CCWGG	5 cut(s)	675, 1041, 1656, 1661, 1809
BclI	TGATCA	1 cut(s)	1189
BcnI	CCSGG	2 cut(s)	2289, 2594
BcoDI	GTCTC	5 cut(s)	927, 1126, 1640, 1870, 2543
BfaI	CTAG	4 cut(s)	854, 1121, 1343, 2217
BfmI	CTRYAG	3 cut(s)	439, 1329, 1986
BfrI	CTTAAG	1 cut(s)	842
BfuAI	ACCTGC	1 cut(s)	1219
BglII	AGATCT	1 cut(s)	1888
BisI	GCNGC	7 cut(s)	439, 1332, 1975, 1989, 2034, 2172, 2175
BlpI	GCTNAGC	1 cut(s)	2005
BlsI	GCNGC	7 cut(s)	440, 1333, 1976, 1990, 2035, 2173, 2176
Bme1390I	CCNGG	7 cut(s)	675, 1041, 1656, 1661, 1809, 2289, 2594
Bme18I	GGWCC	4 cut(s)	802, 1175, 1522, 2439
BmeT110I	CYCGRG	1 cut(s)	2461
BmgT120I	GGNCC	5 cut(s)	802, 1175, 1522, 2209, 2439
BmrFI	CCNGG	7 cut(s)	675, 1041, 1656, 1661, 1809, 2289, 2594
BmrI	ACTGGG	3 cut(s)	1358, 1615, 2235
BmsI	GCATC	6 cut(s)	194, 978, 1021, 1730, 1986, 2338
BmuI	ACTGGG	3 cut(s)	1358, 1615, 2235
BpiI	GAAGAC	1 cut(s)	2662
BplI	GAGNNNNNCTC	2 cut(s)	137, 169
BpmI	CTGGAG	2 cut(s)	1356, 1791
Bpu10I	CCTNAGC	2 cut(s)	795, 1238
Bpu1102I	GCTNAGC	1 cut(s)	2005
BpuEI	CTTGAG	4 cut(s)	44, 1274, 1481, 2286
BpuMI	CCSGG	2 cut(s)	2289, 2594
BsaAI	YACGTR	1 cut(s)	620
BsaI	GGTCTC	2 cut(s)	1126, 1870
BsaJI	CCNNGG	2 cut(s)	1563, 2287
BsaXI	ACNNNNNCTCC	4 cut(s)	1275, 1305, 1655, 1685
Bsc4I	CCNNNNNNNGG	9 cut(s)	529, 674, 1006, 1493, 2093, 2231, 2306, 2431, 2636
Bse1I	ACTGG	8 cut(s)	314, 1364, 1388, 1610, 1830, 2241, 2485, 2557
Bse21I	CCTNAGG	1 cut(s)	2634
Bse3DI	GCAATG	2 cut(s)	879, 1999
BseBI	CCWGG	5 cut(s)	675, 1041, 1656, 1661, 1809
BseDI	CCNNGG	2 cut(s)	1563, 2287
BseGI	GGATG	8 cut(s)	487, 547, 670, 709, 2068, 2135, 2562, 2589
BseLI	CCNNNNNNNGG	9 cut(s)	529, 674, 1006, 1493, 2093, 2231, 2306, 2431, 2636
BseMI	GCAATG	2 cut(s)	879, 1999
BseNI	ACTGG	8 cut(s)	314, 1364, 1388, 1610, 1830, 2241, 2485, 2557
BseRI	GAGGAG	2 cut(s)	1625, 1935
BseSI	GKGCMC	1 cut(s)	2460
BseXI	GCAGC	7 cut(s)	425, 1343, 1986, 2000, 2045, 2158, 2161
BseYI	CCCAGC	1 cut(s)	1258
Bsh1236I	CGCG	2 cut(s)	207, 1063
Bsh1285I	CGRYCG	1 cut(s)	1882
BshFI	GGCC	4 cut(s)	1486, 1659, 2210, 2389
BshNI	GGYRCC	3 cut(s)	1939, 2543, 2596
BsiEI	CGRYCG	1 cut(s)	1882
BsiHKAI	GWGCWC	1 cut(s)	2017
BsiHKCI	CYCGRG	1 cut(s)	2461
BsiSI	CCGG	2 cut(s)	2289, 2594
BslFI	GGGAC	6 cut(s)	155, 815, 852, 1188, 2425, 2652
BslI	CCNNNNNNNGG	9 cut(s)	529, 674, 1006, 1493, 2093, 2231, 2306, 2431, 2636
BsmAI	GTCTC	5 cut(s)	927, 1126, 1640, 1870, 2543
BsmFI	GGGAC	6 cut(s)	155, 815, 852, 1188, 2425, 2652
BsmI	GAATGC	3 cut(s)	15, 546, 1757
BsnI	GGCC	4 cut(s)	1486, 1659, 2210, 2389
Bso31I	GGTCTC	2 cut(s)	1126, 1870
BsoBI	CYCGRG	1 cut(s)	2461
Bsp1286I	GDGCHC	2 cut(s)	2017, 2460
Bsp143I	GATC	9 cut(s)	949, 1189, 1197, 1354, 1496, 1510, 1888, 2221, 2474
Bsp1720I	GCTNAGC	1 cut(s)	2005
BspACI	CCGC	4 cut(s)	6, 1108, 1839, 1878
BspANI	GGCC	4 cut(s)	1486, 1659, 2210, 2389
BspFNI	CGCG	2 cut(s)	207, 1063
BspHI	TCATGA	2 cut(s)	397, 1128
BspMAI	CTGCAG	3 cut(s)	443, 1333, 1990
BspMI	ACCTGC	1 cut(s)	1219
BspPI	GGATC	7 cut(s)	957, 1205, 1349, 1504, 1518, 2216, 2482
BspT107I	GGYRCC	3 cut(s)	1939, 2543, 2596
BspTI	CTTAAG	1 cut(s)	842
BspTNI	GGTCTC	2 cut(s)	1126, 1870
BsrBI	CCGCTC	1 cut(s)	6
BsrDI	GCAATG	2 cut(s)	879, 1999
BsrI	ACTGG	8 cut(s)	314, 1364, 1388, 1610, 1830, 2241, 2485, 2557
BssECI	CCNNGG	2 cut(s)	1563, 2287
BssMI	GATC	9 cut(s)	949, 1189, 1197, 1354, 1496, 1510, 1888, 2221, 2474
BssT1I	CCWWGG	1 cut(s)	1563
Bst2UI	CCWGG	5 cut(s)	675, 1041, 1656, 1661, 1809
Bst4CI	ACNGT	4 cut(s)	421, 889, 2261, 2643
Bst6I	CTCTTC	3 cut(s)	60, 84, 2080
BstAFI	CTTAAG	1 cut(s)	842
BstBAI	YACGTR	1 cut(s)	620
BstC8I	GCNNGC	4 cut(s)	870, 1719, 2208, 2365
BstEII	GGTNACC	1 cut(s)	662
BstENI	CCTNNNNNAGG	1 cut(s)	2304
BstF5I	GGATG	8 cut(s)	487, 547, 670, 709, 2068, 2135, 2562, 2589
BstFNI	CGCG	2 cut(s)	207, 1063
BstHHI	GCGC	3 cut(s)	209, 852, 1063
BstKTI	GATC	9 cut(s)	952, 1192, 1200, 1357, 1499, 1513, 1891, 2224, 2477
BstMAI	GTCTC	5 cut(s)	927, 1126, 1640, 1870, 2543
BstMBI	GATC	9 cut(s)	949, 1189, 1197, 1354, 1496, 1510, 1888, 2221, 2474
BstMCI	CGRYCG	1 cut(s)	1882
BstMWI	GCNNNNNNNGC	3 cut(s)	191, 223, 2381
BstNI	CCWGG	5 cut(s)	675, 1041, 1656, 1661, 1809
BstNSI	RCATGY	3 cut(s)	1721, 1960, 2113
BstPI	GGTNACC	1 cut(s)	662
BstSCI	CCNGG	7 cut(s)	673, 1039, 1654, 1659, 1807, 2287, 2592
BstSFI	CTRYAG	3 cut(s)	439, 1329, 1986
BstSLI	GKGCMC	1 cut(s)	2460
BstUI	CGCG	2 cut(s)	207, 1063
BstV1I	GCAGC	7 cut(s)	425, 1343, 1986, 2000, 2045, 2158, 2161
BstV2I	GAAGAC	1 cut(s)	2662
BstX2I	RGATCY	3 cut(s)	1197, 1510, 1888
BstXI	CCANNNNNNTGG	2 cut(s)	478, 1547
BstYI	RGATCY	3 cut(s)	1197, 1510, 1888
Bsu36I	CCTNAGG	1 cut(s)	2634
BsuRI	GGCC	4 cut(s)	1486, 1659, 2210, 2389
BtgZI	GCGATG	1 cut(s)	188
BtsCI	GGATG	8 cut(s)	487, 547, 670, 709, 2068, 2135, 2562, 2589
BtsI	GCAGTG	1 cut(s)	1326
BtsIMutI	CAGTG	3 cut(s)	426, 1199, 1326
BveI	ACCTGC	1 cut(s)	1219
Cac8I	GCNNGC	4 cut(s)	870, 1719, 2208, 2365
CaiI	CAGNNNCTG	1 cut(s)	1643
CciI	TCATGA	2 cut(s)	397, 1128
CfoI	GCGC	3 cut(s)	209, 852, 1063
Cfr13I	GGNCC	5 cut(s)	802, 1175, 1522, 2209, 2439
Csp6I	GTAC	3 cut(s)	903, 1640, 2397
CviQI	GTAC	3 cut(s)	903, 1640, 2397
DpnI	GATC	9 cut(s)	951, 1191, 1199, 1356, 1498, 1512, 1890, 2223, 2476
DpnII	GATC	9 cut(s)	949, 1189, 1197, 1354, 1496, 1510, 1888, 2221, 2474
DraI	TTTAAA	2 cut(s)	555, 1620
EaeI	YGGCCR	3 cut(s)	1484, 1657, 2387
Eam1104I	CTCTTC	3 cut(s)	60, 84, 2080
EarI	CTCTTC	3 cut(s)	60, 84, 2080
Eco130I	CCWWGG	1 cut(s)	1563
Eco31I	GGTCTC	2 cut(s)	1126, 1870
Eco32I	GATATC	2 cut(s)	1126, 2494
Eco47I	GGWCC	4 cut(s)	802, 1175, 1522, 2439
Eco57I	CTGAAG	2 cut(s)	60, 1877
Eco72I	CACGTG	1 cut(s)	620
Eco81I	CCTNAGG	1 cut(s)	2634
Eco88I	CYCGRG	1 cut(s)	2461
Eco91I	GGTNACC	1 cut(s)	662
EcoNI	CCTNNNNNAGG	1 cut(s)	2304
EcoO109I	RGGNCCY	2 cut(s)	2209, 2439
EcoO65I	GGTNACC	1 cut(s)	662
EcoRII	CCWGG	5 cut(s)	673, 1039, 1654, 1659, 1807
EcoRV	GATATC	2 cut(s)	1126, 2494
EcoT14I	CCWWGG	1 cut(s)	1563
EcoT22I	ATGCAT	2 cut(s)	1036, 1723
ErhI	CCWWGG	1 cut(s)	1563
FalI	AAGNNNNNCTT	2 cut(s)	767, 799
FaqI	GGGAC	6 cut(s)	155, 815, 852, 1188, 2425, 2652
FauNDI	CATATG	1 cut(s)	625
FbaI	TGATCA	1 cut(s)	1189
FblI	GTMKAC	1 cut(s)	1848
Fnu4HI	GCNGC	7 cut(s)	439, 1332, 1975, 1989, 2034, 2172, 2175
FokI	GGATG	8 cut(s)	494, 554, 657, 696, 2055, 2122, 2549, 2576
Fsp4HI	GCNGC	7 cut(s)	439, 1332, 1975, 1989, 2034, 2172, 2175
FspBI	CTAG	4 cut(s)	854, 1121, 1343, 2217
GlaI	GCGC	3 cut(s)	208, 851, 1062
GluI	GCNGC	7 cut(s)	439, 1332, 1975, 1989, 2034, 2172, 2175
GsaI	CCCAGC	1 cut(s)	1262
GsuI	CTGGAG	2 cut(s)	1356, 1791
HaeIII	GGCC	4 cut(s)	1486, 1659, 2210, 2389
HapII	CCGG	2 cut(s)	2289, 2594
HhaI	GCGC	3 cut(s)	209, 852, 1063
Hin6I	GCGC	3 cut(s)	207, 850, 1061
HinP1I	GCGC	3 cut(s)	207, 850, 1061
HincII	GTYRAC	4 cut(s)	307, 510, 589, 1441
HindII	GTYRAC	4 cut(s)	307, 510, 589, 1441
HindIII	AAGCTT	1 cut(s)	1457
HpaII	CCGG	2 cut(s)	2289, 2594
HphI	GGTGA	2 cut(s)	674, 1055
Hpy166II	GTNNAC	5 cut(s)	307, 510, 589, 1441, 1849
Hpy188I	TCNGA	9 cut(s)	28, 157, 378, 532, 1222, 1603, 1857, 2405, 2581
Hpy8I	GTNNAC	5 cut(s)	307, 510, 589, 1441, 1849
Hpy99I	CGWCG	1 cut(s)	1974
HpyAV	CCTTC	6 cut(s)	964, 1775, 1855, 1905, 2300, 2425
HpyCH4III	ACNGT	4 cut(s)	421, 889, 2261, 2643
HpyCH4IV	ACGT	3 cut(s)	619, 1104, 2023
HpyF10VI	GCNNNNNNNGC	3 cut(s)	191, 223, 2381
HpySE526I	ACGT	3 cut(s)	619, 1104, 2023
HspAI	GCGC	3 cut(s)	207, 850, 1061
KflI	GGGWCCC	1 cut(s)	2439
Ksp22I	TGATCA	1 cut(s)	1189
Kzo9I	GATC	9 cut(s)	949, 1189, 1197, 1354, 1496, 1510, 1888, 2221, 2474
LmnI	GCTCC	1 cut(s)	1663
Lsp1109I	GCAGC	7 cut(s)	425, 1343, 1986, 2000, 2045, 2158, 2161
LweI	GCATC	6 cut(s)	194, 978, 1021, 1730, 1986, 2338
MaeI	CTAG	4 cut(s)	854, 1121, 1343, 2217
MaeII	ACGT	3 cut(s)	619, 1104, 2023
MaeIII	GTNAC	6 cut(s)	662, 1399, 1425, 2150, 2264, 2518
MalI	GATC	9 cut(s)	951, 1191, 1199, 1356, 1498, 1512, 1890, 2223, 2476
MbiI	CCGCTC	1 cut(s)	6
MboI	GATC	9 cut(s)	949, 1189, 1197, 1354, 1496, 1510, 1888, 2221, 2474
MfeI	CAATTG	1 cut(s)	300
MflI	RGATCY	3 cut(s)	1197, 1510, 1888
MhlI	GDGCHC	2 cut(s)	2017, 2460
MlsI	TGGCCA	3 cut(s)	1486, 1659, 2389
MluNI	TGGCCA	3 cut(s)	1486, 1659, 2389
MlyI	GAGTC	4 cut(s)	68, 929, 1074, 1239
MmeI	TCCRAC	1 cut(s)	2625
Mox20I	TGGCCA	3 cut(s)	1486, 1659, 2389
Mph1103I	ATGCAT	2 cut(s)	1036, 1723
MroXI	GAANNNNTTC	2 cut(s)	501, 779
MscI	TGGCCA	3 cut(s)	1486, 1659, 2389
MslI	CAYNNNNRTG	2 cut(s)	1631, 2594
Msp20I	TGGCCA	3 cut(s)	1486, 1659, 2389
MspA1I	CMGCKG	3 cut(s)	1334, 1418, 1841
MspCI	CTTAAG	1 cut(s)	842
MspI	CCGG	2 cut(s)	2289, 2594
MspR9I	CCNGG	7 cut(s)	675, 1041, 1656, 1661, 1809, 2289, 2594
MunI	CAATTG	1 cut(s)	300
Mva1269I	GAATGC	3 cut(s)	15, 546, 1757
MvaI	CCWGG	5 cut(s)	675, 1041, 1656, 1661, 1809
MvnI	CGCG	2 cut(s)	207, 1063
MwoI	GCNNNNNNNGC	3 cut(s)	191, 223, 2381
NciI	CCSGG	2 cut(s)	2289, 2594
NdeI	CATATG	1 cut(s)	625
NdeII	GATC	9 cut(s)	949, 1189, 1197, 1354, 1496, 1510, 1888, 2221, 2474
NmeAIII	GCCGAG	1 cut(s)	2572
NmuCI	GTSAC	3 cut(s)	662, 1399, 2264
NsiI	ATGCAT	2 cut(s)	1036, 1723
NspI	RCATGY	3 cut(s)	1721, 1960, 2113
PaeI	GCATGC	1 cut(s)	1721
PagI	TCATGA	2 cut(s)	397, 1128
PaqCI	CACCTGC	1 cut(s)	1219
PctI	GAATGC	3 cut(s)	15, 546, 1757
PdmI	GAANNNNTTC	2 cut(s)	501, 779
PflMI	CCANNNNNTGG	1 cut(s)	1493
PfoI	TCCNGGA	1 cut(s)	673
PkrI	GCNGC	7 cut(s)	440, 1333, 1976, 1990, 2035, 2173, 2176
PleI	GAGTC	4 cut(s)	68, 928, 1073, 1239
PmaCI	CACGTG	1 cut(s)	620
PmlI	CACGTG	1 cut(s)	620
PpsI	GAGTC	4 cut(s)	68, 928, 1073, 1239
Ppu21I	YACGTR	1 cut(s)	620
PpuMI	RGGWCCY	1 cut(s)	2439
PshBI	ATTAAT	2 cut(s)	1167, 1575
Psp5II	RGGWCCY	1 cut(s)	2439
Psp6I	CCWGG	5 cut(s)	673, 1039, 1654, 1659, 1807
PspCI	CACGTG	1 cut(s)	620
PspEI	GGTNACC	1 cut(s)	662
PspFI	CCCAGC	1 cut(s)	1258
PspGI	CCWGG	5 cut(s)	673, 1039, 1654, 1659, 1807
PspPI	GGNCC	5 cut(s)	802, 1175, 1522, 2209, 2439
PspPPI	RGGWCCY	1 cut(s)	2439
PstI	CTGCAG	3 cut(s)	443, 1333, 1990
PstNI	CAGNNNCTG	1 cut(s)	1643
PsuI	RGATCY	3 cut(s)	1197, 1510, 1888
PvuII	CAGCTG	2 cut(s)	1334, 1418
RsaI	GTAC	3 cut(s)	904, 1641, 2398
RsaNI	GTAC	3 cut(s)	903, 1640, 2397
RseI	CAYNNNNRTG	2 cut(s)	1631, 2594
SatI	GCNGC	7 cut(s)	439, 1332, 1975, 1989, 2034, 2172, 2175
Sau3AI	GATC	9 cut(s)	949, 1189, 1197, 1354, 1496, 1510, 1888, 2221, 2474
Sau96I	GGNCC	5 cut(s)	802, 1175, 1522, 2209, 2439
SchI	GAGTC	4 cut(s)	68, 929, 1074, 1239
ScrFI	CCNGG	7 cut(s)	675, 1041, 1656, 1661, 1809, 2289, 2594
SduI	GDGCHC	2 cut(s)	2017, 2460
SfaNI	GCATC	6 cut(s)	194, 978, 1021, 1730, 1986, 2338
SfcI	CTRYAG	3 cut(s)	439, 1329, 1986
SinI	GGWCC	4 cut(s)	802, 1175, 1522, 2439
SmiMI	CAYNNNNRTG	2 cut(s)	1631, 2594
SmlI	CTYRAG	5 cut(s)	59, 842, 1253, 1460, 2301
SmoI	CTYRAG	5 cut(s)	59, 842, 1253, 1460, 2301
SphI	GCATGC	1 cut(s)	1721
SsiI	CCGC	4 cut(s)	6, 1108, 1839, 1878
SspMI	CTAG	4 cut(s)	854, 1121, 1343, 2217
StyD4I	CCNGG	7 cut(s)	673, 1039, 1654, 1659, 1807, 2287, 2592
StyI	CCWWGG	1 cut(s)	1563
TaaI	ACNGT	4 cut(s)	421, 889, 2261, 2643
TaiI	ACGT	3 cut(s)	622, 1107, 2026
TaqI	TCGA	5 cut(s)	109, 387, 415, 1822, 2429
TatI	WGTACW	1 cut(s)	902
TscAI	CASTG	3 cut(s)	426, 1199, 1333
TseFI	GTSAC	3 cut(s)	662, 1399, 2264
TseI	GCWGC	7 cut(s)	438, 1331, 1974, 1988, 2033, 2171, 2174
Tsp45I	GTSAC	3 cut(s)	662, 1399, 2264
TspDTI	ATGAA	8 cut(s)	372, 396, 414, 950, 983, 1115, 1750, 2344
TspGWI	ACGGA	4 cut(s)	887, 1084, 1138, 2010
TspRI	CASTG	3 cut(s)	426, 1199, 1333
Van91I	CCANNNNNTGG	1 cut(s)	1493
Vha464I	CTTAAG	1 cut(s)	842
VpaK11BI	GGWCC	4 cut(s)	802, 1175, 1522, 2439
VspI	ATTAAT	2 cut(s)	1167, 1575
XagI	CCTNNNNNAGG	1 cut(s)	2304
XapI	RAATTY	6 cut(s)	679, 1275, 1490, 1733, 2117, 2377
XbaI	TCTAGA	1 cut(s)	1120
XceI	RCATGY	3 cut(s)	1721, 1960, 2113
XmiI	GTMKAC	1 cut(s)	1848
XmnI	GAANNNNTTC	2 cut(s)	501, 779
XspI	CTAG	4 cut(s)	854, 1121, 1343, 2217
Zsp2I	ATGCAT	2 cut(s)	1036, 1723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.