Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0002777

Physical Location & Seq

Genomic Coordinates Forward (+)

5047147 .. 5054266

Gene Structure 7120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010882

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2883 bp

ATGGGATGGGGAAACATTTACAGAAGGCGTATGAAAGTATGCACAGTGGCCTTTCTTATATACCTCGATTACAAGGCTTTGCAGCAAAGAGACAAATGGATTAGCAAACGCTGCAAATCTAAAAGTGAGGCTTTATGGGAAAATGCTCATGAGCGGAATGCTAAACGAGTTCTCAGGTTGATAGTAGAGTTGGAAGGTTTGTGGGTGAAACTTGGGCAGTATCTGTCTACACGGGCAGATGTTCTTCCTGAAGCATATACATCTCTTCTCAAGCAATTACAGGACTCTCTTCCCCCTCGTCCTTTGCAAGAGGTTTCTCGAACTATACAGAAAGAGTTGGGGAAATCAATGGACGAGTTGTTCTCAGATTTTGTCAAAGTCCCTTTGGCAACTGCATCAATAGCACAAGTCCATCGCGCAACCCTGCTTGATGGGCAGGAAGTAGTTGTTAAAGTTCAGCATGAGGGCATTAAGACAATCATATTGGAGGACTTGAAGAACGCAAAGTCAATTGTTGACTGGATAGCATGGGCAGAGCCTCAGCATAATTTTAATCCTATGATAGATGAATGGTGCAAAGAATGTCCGAATGAACTCGACTTCAATCATGAAGCTGAGAATACTCGAACGGTGTCTAAAAATCTTGGCTGCAAAACCAAACATGATGATAACCCAAGTACCAATAAAGTGGATGTTTTGATACCAGAAGTTATTCAGTCAACAGAGAAAGTCCTCATTTCGGAGTTTATGGATGGCATTCGTTTAAATGACATAGAATCATTTGAAGCATTTGGTGTCAACAAACAAAAGGTTGTTGAAGAAATCACCCGTGCATATGCCCACCAAATATATGTTGATGGATTTTTCAATGGTGACCCTCATCCTGGAAATTTTCTTGTGAGCAAGGAACCTCCACATCGTCCAATTTTGCTGGACTTTGGACTTACTAAGAAATTATCAAGCTCTCTAAAACAAGCATTAGCGAAGATGTTCTTGGCTTCTGCTGAGGGGGACCATGTTGCTCTATTGTCGGCTTTTGCAGAAATGGGACTGAAGTTGCGCCTAGATATACCAGAGCAGGCAATGGAGATAACAACTGTATTCTTCCGTAGTACAACGCCACCAAATGAGTCTCTAGAAACGATGAAAGCTCTGGTGGATCAAAGAGAAAAAAACATGAAGGTCATACAGGACAAGATGCAACTTAACCGAAAAGAGGTTAAACGCTTTAATCCTGTTGATGCATTTCCTGGTGATATTGTGATTTTTGCGCGAGTCCTCAATCTTCTCAGAGGGCTTTCTTCCATAATGAACGTCCGCATTGTATATCTAGATATCATGAGACCATTTGCTGAATCCGTTTTACAGGGAAGCATTAATAGGGGACCAATGGTAAATGATCGGTGGATCTATGACACACCTGCCCTCTCTGATGTGGAGGCGAAGCTGAGGCGACTCCTACTTGAGCTGGGGAATGATAATAAAATTCTTGGAGTTCAGGTATGTGCCTACAAAGATGGAGAGGTTATTATTGACACTGCAGCTGGAGTGCTAGGTAGATATGATCCTCGCCCAGTTCAGCCTGACAGCCTTTTTCCAGTTTTTTCTGTGACAAAGGGTATAACAGCTGGAATGTTACATTGGCTGGTTGACAACGGAAAATTGAAGCTTGAGGAAAGTGTTGCAAGTATATGGCCAGAATTTGGATCAAACAGAAAGGATCTCATAAAGGTCCATCATGTGCTTAACCATACATCTGGATTGCACAATGCCTTGGCAGATATTAATAAAGAAAACCCTTTACTTATGTCTGACTGGGAGGAGTGTTTAAATCGCATTTCCATGTCAGTACCTGAGACTGAACCTGGCCAGGAGCAGTTGTATCACTATCTGTCTTTTGGGTGGATATGTGGTGGAATCATTGAGCATGCATCAGGGAAAAAATTTAAGGAGATTCTGGAAGAAGCATTCATACACCCCCTACAAATTGAAGGGGAGTTATATATTGGAATCCCTCCAGGTGTGGAATCTCGACTGGCAACCCTAACCGCTGATGTAGACAATCTGAAGAAGGTCTCAGGGATAAGCGGTCGTAAAGACCTACCTTCCACTTTTCAGGGGGACAACCTTGTGCAAATTGTGAGCATGGTGCCTCCTCTATTTAACATGCTGAACATCCGTCGCAGCATCATACCTGCAGCTAACGGACATTGCTCAGCCCGTGCTCTTGCACGTTATTATGCAGCCTTAGTTGATGGTGGTGTTGTTCCACCACCTCATCCCTCTTCCTCTAAACCAGCTCTGGGTAGTCACCCTCACATGCCCAAGTTTCCTGTTGAATCGTCATCCAAAAAGCGAGGTAACAGAAGCAAGAAGTTAGCTGCTGCTTTCAAGTTCAGGACTAAGAAATATGAGCAGGCCCCTACTAGTGATCCCGATATTGGTAGCCCCAGTAGAAACAATAGCAATAGTAGTGACATTAGTAATGCAACTGACCCCGGTTCCATTCCTCAAGAAGGTAGTGTCAATAAGATATTCAGCAACCCCAGAATCCATGATGCTTTCATGGGTGCTGGCGAATATGCAAATTTGGCCAAGCCAGATGGTACATTCGGACTTGGGTTCAAGAGATACCACTCGAAGGACGGGTCCCTTATTGGCTTTGGGCACTCGGGCATGGGTGGATCAACTGGCTTCTGTGATATCAAAAATAGGTTTGCCATTTCTGTAACCTTGAATAAAATGTCATTTGGTGCCGAGACTGGAAAAATCATCCATTTTGTTTGTTCGGAGTTAAACATCCCGGTGCCACAGGATTATTTGAGATTTGCAGAGACTCCCCCCGAGGGACGGTTGGATTCTGGAAGACCTTTGATAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1 Beta-lactamase WaaY

Protein Analysis

961

Amino Acids

107.09

Weight (kDa)

7.63

Isoelectric Point (pI)

41.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	92 - 341	3.3e-66	ABC1 atypical kinase-like domain
Beta-lactamase	PF00144	484 - 768	1e-41	Beta-lactamase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24810 AT5G24810
fragaria_vesca	FvH4_2g36370 FvH4_2g36370 FvH4_2g36370 FvH4_2g36372
malus_domestica	MD08G1123100.v1.1 MD15G1100800.v1.1 MD15G1102100.v1.1
prunus_persica	Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1
pyrus_communis	pycom08g10200 pycom08g10210 pycom15g09330
rosa_chinensis	RchiOBHm_Chr6g0305511
rosa_laevigata	RLG00000010882 RLG00000010885
rosa_multiflora	Rmu_co8395109.1_g000001 Rmu_sc0001809.1_g000002 Rmu_sc0001809.1_g000004 Rmu_sc0029548.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162720 Rroxscaffold_7G00162740
rosa_rugosa	Rorug06G0340800.1 Rorug06G0341000 Rorug06G0341100
rosa_samantha	Rh6AG453000 Rh6AG453200 Rh6BG448600 Rh6BG448800 Rh6CG466700 Rh6CG467000 Rh6DG453400 Rh6DG453600
rosa_wichuraiana	Rw6G039470 Rw6G039490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1429
Acc36I	ACCTGC	2 cut(s)	1429, 2203
AccB1I	GGYRCC	3 cut(s)	2149, 2753, 2806
AccB7I	CCANNNNNTGG	1 cut(s)	1703
AccBSI	CCGCTC	1 cut(s)	154
AccI	GTMKAC	2 cut(s)	227, 2058
AccII	CGCG	2 cut(s)	417, 1273
AciI	CCGC	4 cut(s)	154, 1318, 2049, 2088
AclWI	GGATC	7 cut(s)	1167, 1415, 1559, 1714, 1728, 2426, 2692
AcoI	YGGCCR	3 cut(s)	1694, 1867, 2592
AcsI	RAATTY	5 cut(s)	889, 1485, 1700, 1943, 2587
AcuI	CTGAAG	3 cut(s)	270, 1073, 2087
AfaI	GTAC	4 cut(s)	679, 1114, 1851, 2608
AhlI	ACTAGT	1 cut(s)	2426
AjnI	CCWGG	5 cut(s)	883, 1249, 1864, 1869, 2017
AjuI	GAANNNNNNNTTGG	4 cut(s)	977, 1009, 1624, 1656
AloI	GAACNNNNNNTCC	2 cut(s)	344, 376
Alw21I	GWGCWC	1 cut(s)	2227
Alw26I	GTCTC	7 cut(s)	84, 1137, 1336, 1850, 2080, 2753, 2828
AlwI	GGATC	7 cut(s)	1167, 1415, 1559, 1714, 1728, 2426, 2692
AlwNI	CAGNNNCTG	2 cut(s)	223, 1853
Ama87I	CYCGRG	2 cut(s)	2671, 2843
AoxI	GGCC	5 cut(s)	48, 1694, 1867, 2418, 2592
ApeKI	GCWGC	9 cut(s)	82, 111, 648, 1541, 2184, 2198, 2243, 2381, 2384
ApoI	RAATTY	5 cut(s)	889, 1485, 1700, 1943, 2587
ArsI	GACNNNNNNTTYG	2 cut(s)	2633, 2665
AseI	ATTAAT	2 cut(s)	1377, 1785
Asp700I	GAANNNNTTC	2 cut(s)	711, 989
AspLEI	GCGC	3 cut(s)	419, 1062, 1273
AspS9I	GGNCC	5 cut(s)	1012, 1385, 1732, 2419, 2649
AsuC2I	CCSGG	2 cut(s)	2499, 2804
AsuHPI	GGTGA	5 cut(s)	217, 817, 884, 1265, 2303
AvaI	CYCGRG	2 cut(s)	2671, 2843
AvaII	GGWCC	4 cut(s)	1012, 1385, 1732, 2649
BaeGI	GKGCMC	1 cut(s)	2670
BaeI	ACNNNNGTAYC	2 cut(s)	661, 694
BalI	TGGCCA	3 cut(s)	1696, 1869, 2594
BanI	GGYRCC	3 cut(s)	2149, 2753, 2806
BarI	GAAGNNNNNNTAC	2 cut(s)	1956, 1988
BbsI	GAAGAC	1 cut(s)	2872
Bbv12I	GWGCWC	1 cut(s)	2227
BbvCI	CCTCAGC	3 cut(s)	540, 1005, 1448
BbvI	GCAGC	9 cut(s)	94, 98, 635, 1553, 2196, 2210, 2255, 2368, 2371
BccI	CCATC	8 cut(s)	420, 425, 746, 851, 1511, 1743, 2249, 2597
BciT130I	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
BcnI	CCSGG	2 cut(s)	2499, 2804
BcoDI	GTCTC	7 cut(s)	84, 1137, 1336, 1850, 2080, 2753, 2828
BcuI	ACTAGT	1 cut(s)	2426
BfaI	CTAG	5 cut(s)	1064, 1136, 1331, 1553, 2427
BfmI	CTRYAG	2 cut(s)	1539, 2196
BfuAI	ACCTGC	2 cut(s)	1429, 2203
BisI	GCNGC	9 cut(s)	83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385
BlpI	GCTNAGC	1 cut(s)	2215
BlsI	GCNGC	9 cut(s)	84, 113, 650, 1543, 2186, 2200, 2245, 2383, 2386
Bme1390I	CCNGG	7 cut(s)	885, 1251, 1866, 1871, 2019, 2499, 2804
Bme18I	GGWCC	4 cut(s)	1012, 1385, 1732, 2649
BmeT110I	CYCGRG	2 cut(s)	2671, 2843
BmgT120I	GGNCC	5 cut(s)	1012, 1385, 1732, 2419, 2649
BmrFI	CCNGG	7 cut(s)	885, 1251, 1866, 1871, 2019, 2499, 2804
BmrI	ACTGGG	3 cut(s)	1568, 1825, 2445
BmsI	GCATC	6 cut(s)	404, 1188, 1231, 1940, 2196, 2548
BmuI	ACTGGG	3 cut(s)	1568, 1825, 2445
BpiI	GAAGAC	1 cut(s)	2872
BplI	GAGNNNNNCTC	2 cut(s)	347, 379
BpmI	CTGGAG	2 cut(s)	1566, 2001
Bpu10I	CCTNAGC	3 cut(s)	540, 1005, 1448
Bpu1102I	GCTNAGC	1 cut(s)	2215
BpuEI	CTTGAG	4 cut(s)	254, 1484, 1691, 2496
BpuMI	CCSGG	2 cut(s)	2499, 2804
BsaI	GGTCTC	2 cut(s)	1336, 2080
BsaJI	CCNNGG	3 cut(s)	1773, 2497, 2844
BsaXI	ACNNNNNCTCC	4 cut(s)	1485, 1515, 1865, 1895
Bse1I	ACTGG	8 cut(s)	524, 1574, 1598, 1820, 2040, 2451, 2695, 2767
Bse3DI	GCAATG	2 cut(s)	1089, 2209
BseBI	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
BseDI	CCNNGG	3 cut(s)	1773, 2497, 2844
BseGI	GGATG	9 cut(s)	11, 697, 757, 880, 2175, 2278, 2345, 2772, 2799
BseMI	GCAATG	2 cut(s)	1089, 2209
BseNI	ACTGG	8 cut(s)	524, 1574, 1598, 1820, 2040, 2451, 2695, 2767
BseRI	GAGGAG	2 cut(s)	1835, 2145
BseSI	GKGCMC	1 cut(s)	2670
BseXI	GCAGC	9 cut(s)	94, 98, 635, 1553, 2196, 2210, 2255, 2368, 2371
BseYI	CCCAGC	1 cut(s)	1468
Bsh1236I	CGCG	2 cut(s)	417, 1273
Bsh1285I	CGRYCG	1 cut(s)	2092
BshFI	GGCC	5 cut(s)	50, 1696, 1869, 2420, 2594
BshNI	GGYRCC	3 cut(s)	2149, 2753, 2806
BsiEI	CGRYCG	1 cut(s)	2092
BsiHKAI	GWGCWC	1 cut(s)	2227
BsiHKCI	CYCGRG	2 cut(s)	2671, 2843
BsiSI	CCGG	2 cut(s)	2499, 2804
BslFI	GGGAC	7 cut(s)	365, 1025, 1062, 1398, 2135, 2635, 2862
BsmAI	GTCTC	7 cut(s)	84, 1137, 1336, 1850, 2080, 2753, 2828
BsmFI	GGGAC	7 cut(s)	365, 1025, 1062, 1398, 2135, 2635, 2862
BsmI	GAATGC	3 cut(s)	163, 756, 1967
BsnI	GGCC	5 cut(s)	50, 1696, 1869, 2420, 2594
Bso31I	GGTCTC	2 cut(s)	1336, 2080
BsoBI	CYCGRG	2 cut(s)	2671, 2843
Bsp1286I	GDGCHC	2 cut(s)	2227, 2670
Bsp143I	GATC	8 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684
Bsp1720I	GCTNAGC	1 cut(s)	2215
BspACI	CCGC	4 cut(s)	154, 1318, 2049, 2088
BspANI	GGCC	5 cut(s)	50, 1696, 1869, 2420, 2594
BspFNI	CGCG	2 cut(s)	417, 1273
BspHI	TCATGA	3 cut(s)	148, 607, 1338
BspMAI	CTGCAG	2 cut(s)	1543, 2200
BspMI	ACCTGC	2 cut(s)	1429, 2203
BspPI	GGATC	7 cut(s)	1167, 1415, 1559, 1714, 1728, 2426, 2692
BspT107I	GGYRCC	3 cut(s)	2149, 2753, 2806
BspTNI	GGTCTC	2 cut(s)	1336, 2080
BsrBI	CCGCTC	1 cut(s)	154
BsrDI	GCAATG	2 cut(s)	1089, 2209
BsrI	ACTGG	8 cut(s)	524, 1574, 1598, 1820, 2040, 2451, 2695, 2767
BssECI	CCNNGG	3 cut(s)	1773, 2497, 2844
BssMI	GATC	8 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684
BssT1I	CCWWGG	1 cut(s)	1773
Bst2UI	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
Bst4CI	ACNGT	4 cut(s)	46, 631, 1099, 2853
Bst6I	CTCTTC	3 cut(s)	270, 294, 2290
BstAPI	GCANNNNNTGC	1 cut(s)	111
BstC8I	GCNNGC	4 cut(s)	1080, 1929, 2418, 2575
BstEII	GGTNACC	1 cut(s)	872
BstENI	CCTNNNNNAGG	1 cut(s)	2514
BstF5I	GGATG	9 cut(s)	11, 697, 757, 880, 2175, 2278, 2345, 2772, 2799
BstFNI	CGCG	2 cut(s)	417, 1273
BstHHI	GCGC	3 cut(s)	419, 1062, 1273
BstKTI	GATC	8 cut(s)	1162, 1402, 1410, 1567, 1709, 1723, 2434, 2687
BstMAI	GTCTC	7 cut(s)	84, 1137, 1336, 1850, 2080, 2753, 2828
BstMBI	GATC	8 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684
BstMCI	CGRYCG	1 cut(s)	2092
BstMWI	GCNNNNNNNGC	4 cut(s)	111, 401, 433, 2591
BstNI	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
BstNSI	RCATGY	3 cut(s)	1931, 2170, 2323
BstPI	GGTNACC	1 cut(s)	872
BstSCI	CCNGG	7 cut(s)	883, 1249, 1864, 1869, 2017, 2497, 2802
BstSFI	CTRYAG	2 cut(s)	1539, 2196
BstSLI	GKGCMC	1 cut(s)	2670
BstUI	CGCG	2 cut(s)	417, 1273
BstV1I	GCAGC	9 cut(s)	94, 98, 635, 1553, 2196, 2210, 2255, 2368, 2371
BstV2I	GAAGAC	1 cut(s)	2872
BstX2I	RGATCY	2 cut(s)	1407, 1720
BstXI	CCANNNNNNTGG	2 cut(s)	688, 1757
BstYI	RGATCY	2 cut(s)	1407, 1720
BsuRI	GGCC	5 cut(s)	50, 1696, 1869, 2420, 2594
BtgZI	GCGATG	1 cut(s)	398
BtsCI	GGATG	9 cut(s)	11, 697, 757, 880, 2175, 2278, 2345, 2772, 2799
BtsI	GCAGTG	1 cut(s)	1536
BtsIMutI	CAGTG	2 cut(s)	51, 1536
BveI	ACCTGC	2 cut(s)	1429, 2203
Cac8I	GCNNGC	4 cut(s)	1080, 1929, 2418, 2575
CaiI	CAGNNNCTG	2 cut(s)	223, 1853
CciI	TCATGA	3 cut(s)	148, 607, 1338
CfoI	GCGC	3 cut(s)	419, 1062, 1273
Cfr13I	GGNCC	5 cut(s)	1012, 1385, 1732, 2419, 2649
Csp6I	GTAC	4 cut(s)	678, 1113, 1850, 2607
CviQI	GTAC	4 cut(s)	678, 1113, 1850, 2607
DpnI	GATC	8 cut(s)	1161, 1401, 1409, 1566, 1708, 1722, 2433, 2686
DpnII	GATC	8 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684
DraI	TTTAAA	2 cut(s)	765, 1830
EaeI	YGGCCR	3 cut(s)	1694, 1867, 2592
Eam1104I	CTCTTC	3 cut(s)	270, 294, 2290
EarI	CTCTTC	3 cut(s)	270, 294, 2290
Eco130I	CCWWGG	1 cut(s)	1773
Eco31I	GGTCTC	2 cut(s)	1336, 2080
Eco32I	GATATC	2 cut(s)	1336, 2704
Eco47I	GGWCC	4 cut(s)	1012, 1385, 1732, 2649
Eco57I	CTGAAG	3 cut(s)	270, 1073, 2087
Eco88I	CYCGRG	2 cut(s)	2671, 2843
Eco91I	GGTNACC	1 cut(s)	872
EcoNI	CCTNNNNNAGG	1 cut(s)	2514
EcoO109I	RGGNCCY	2 cut(s)	2419, 2649
EcoO65I	GGTNACC	1 cut(s)	872
EcoRII	CCWGG	5 cut(s)	883, 1249, 1864, 1869, 2017
EcoRV	GATATC	2 cut(s)	1336, 2704
EcoT14I	CCWWGG	1 cut(s)	1773
EcoT22I	ATGCAT	2 cut(s)	1246, 1933
ErhI	CCWWGG	1 cut(s)	1773
FalI	AAGNNNNNCTT	4 cut(s)	115, 147, 977, 1009
FaqI	GGGAC	7 cut(s)	365, 1025, 1062, 1398, 2135, 2635, 2862
FauNDI	CATATG	1 cut(s)	835
FblI	GTMKAC	2 cut(s)	227, 2058
Fnu4HI	GCNGC	9 cut(s)	83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385
FokI	GGATG	9 cut(s)	18, 704, 764, 867, 2162, 2265, 2332, 2759, 2786
Fsp4HI	GCNGC	9 cut(s)	83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385
FspBI	CTAG	5 cut(s)	1064, 1136, 1331, 1553, 2427
GlaI	GCGC	3 cut(s)	418, 1061, 1272
GluI	GCNGC	9 cut(s)	83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385
GsaI	CCCAGC	1 cut(s)	1472
GsuI	CTGGAG	2 cut(s)	1566, 2001
HaeIII	GGCC	5 cut(s)	50, 1696, 1869, 2420, 2594
HapII	CCGG	2 cut(s)	2499, 2804
HhaI	GCGC	3 cut(s)	419, 1062, 1273
Hin6I	GCGC	3 cut(s)	417, 1060, 1271
HinP1I	GCGC	3 cut(s)	417, 1060, 1271
HincII	GTYRAC	4 cut(s)	517, 720, 799, 1651
HindII	GTYRAC	4 cut(s)	517, 720, 799, 1651
HindIII	AAGCTT	1 cut(s)	1667
HpaII	CCGG	2 cut(s)	2499, 2804
HphI	GGTGA	5 cut(s)	217, 817, 884, 1265, 2303
Hpy166II	GTNNAC	6 cut(s)	228, 517, 720, 799, 1651, 2059
Hpy188I	TCNGA	9 cut(s)	367, 588, 742, 1292, 1432, 1813, 2067, 2615, 2791
Hpy8I	GTNNAC	6 cut(s)	228, 517, 720, 799, 1651, 2059
Hpy99I	CGWCG	1 cut(s)	2184
HpyAV	CCTTC	8 cut(s)	18, 188, 1174, 1985, 2065, 2115, 2510, 2635
HpyCH4III	ACNGT	4 cut(s)	46, 631, 1099, 2853
HpyCH4IV	ACGT	2 cut(s)	1314, 2233
HpyF10VI	GCNNNNNNNGC	4 cut(s)	111, 401, 433, 2591
HpySE526I	ACGT	2 cut(s)	1314, 2233
HspAI	GCGC	3 cut(s)	417, 1060, 1271
KflI	GGGWCCC	1 cut(s)	2649
Kzo9I	GATC	8 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684
LmnI	GCTCC	1 cut(s)	1873
Lsp1109I	GCAGC	9 cut(s)	94, 98, 635, 1553, 2196, 2210, 2255, 2368, 2371
LweI	GCATC	6 cut(s)	404, 1188, 1231, 1940, 2196, 2548
MaeI	CTAG	5 cut(s)	1064, 1136, 1331, 1553, 2427
MaeII	ACGT	2 cut(s)	1314, 2233
MaeIII	GTNAC	7 cut(s)	872, 1609, 1635, 2309, 2360, 2474, 2728
MalI	GATC	8 cut(s)	1161, 1401, 1409, 1566, 1708, 1722, 2433, 2686
MbiI	CCGCTC	1 cut(s)	154
MboI	GATC	8 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684
MfeI	CAATTG	1 cut(s)	510
MflI	RGATCY	2 cut(s)	1407, 1720
MhlI	GDGCHC	2 cut(s)	2227, 2670
MlsI	TGGCCA	3 cut(s)	1696, 1869, 2594
MluNI	TGGCCA	3 cut(s)	1696, 1869, 2594
MlyI	GAGTC	5 cut(s)	278, 1139, 1284, 1449, 2830
MmeI	TCCRAC	2 cut(s)	171, 2835
Mox20I	TGGCCA	3 cut(s)	1696, 1869, 2594
Mph1103I	ATGCAT	2 cut(s)	1246, 1933
MroXI	GAANNNNTTC	2 cut(s)	711, 989
MscI	TGGCCA	3 cut(s)	1696, 1869, 2594
MslI	CAYNNNNRTG	2 cut(s)	1841, 2804
Msp20I	TGGCCA	3 cut(s)	1696, 1869, 2594
MspA1I	CMGCKG	3 cut(s)	1544, 1628, 2051
MspI	CCGG	2 cut(s)	2499, 2804
MspR9I	CCNGG	7 cut(s)	885, 1251, 1866, 1871, 2019, 2499, 2804
MunI	CAATTG	1 cut(s)	510
Mva1269I	GAATGC	3 cut(s)	163, 756, 1967
MvaI	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
MvnI	CGCG	2 cut(s)	417, 1273
MwoI	GCNNNNNNNGC	4 cut(s)	111, 401, 433, 2591
NciI	CCSGG	2 cut(s)	2499, 2804
NdeI	CATATG	1 cut(s)	835
NdeII	GATC	8 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684
NmeAIII	GCCGAG	1 cut(s)	2782
NmuCI	GTSAC	4 cut(s)	872, 1609, 2309, 2474
NsiI	ATGCAT	2 cut(s)	1246, 1933
NspI	RCATGY	3 cut(s)	1931, 2170, 2323
PaeI	GCATGC	1 cut(s)	1931
PagI	TCATGA	3 cut(s)	148, 607, 1338
PaqCI	CACCTGC	1 cut(s)	1429
PctI	GAATGC	3 cut(s)	163, 756, 1967
PdmI	GAANNNNTTC	2 cut(s)	711, 989
PfeI	GAWTC	9 cut(s)	776, 1355, 1917, 1954, 2010, 2027, 2339, 2550, 2858
PflMI	CCANNNNNTGG	1 cut(s)	1703
PfoI	TCCNGGA	1 cut(s)	883
PkrI	GCNGC	9 cut(s)	84, 113, 650, 1543, 2186, 2200, 2245, 2383, 2386
PleI	GAGTC	5 cut(s)	278, 1138, 1283, 1449, 2830
PpsI	GAGTC	5 cut(s)	278, 1138, 1283, 1449, 2830
PpuMI	RGGWCCY	1 cut(s)	2649
PshBI	ATTAAT	2 cut(s)	1377, 1785
Psp5II	RGGWCCY	1 cut(s)	2649
Psp6I	CCWGG	5 cut(s)	883, 1249, 1864, 1869, 2017
PspEI	GGTNACC	1 cut(s)	872
PspFI	CCCAGC	1 cut(s)	1468
PspGI	CCWGG	5 cut(s)	883, 1249, 1864, 1869, 2017
PspPI	GGNCC	5 cut(s)	1012, 1385, 1732, 2419, 2649
PspPPI	RGGWCCY	1 cut(s)	2649
PstI	CTGCAG	2 cut(s)	1543, 2200
PstNI	CAGNNNCTG	2 cut(s)	223, 1853
PsuI	RGATCY	2 cut(s)	1407, 1720
PvuII	CAGCTG	2 cut(s)	1544, 1628
RsaI	GTAC	4 cut(s)	679, 1114, 1851, 2608
RsaNI	GTAC	4 cut(s)	678, 1113, 1850, 2607
RseI	CAYNNNNRTG	2 cut(s)	1841, 2804
SatI	GCNGC	9 cut(s)	83, 112, 649, 1542, 2185, 2199, 2244, 2382, 2385
Sau3AI	GATC	8 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2431, 2684
Sau96I	GGNCC	5 cut(s)	1012, 1385, 1732, 2419, 2649
SchI	GAGTC	5 cut(s)	278, 1139, 1284, 1449, 2830
ScrFI	CCNGG	7 cut(s)	885, 1251, 1866, 1871, 2019, 2499, 2804
SduI	GDGCHC	2 cut(s)	2227, 2670
SfaNI	GCATC	6 cut(s)	404, 1188, 1231, 1940, 2196, 2548
SfcI	CTRYAG	2 cut(s)	1539, 2196
SinI	GGWCC	4 cut(s)	1012, 1385, 1732, 2649
SmiMI	CAYNNNNRTG	2 cut(s)	1841, 2804
SmlI	CTYRAG	4 cut(s)	269, 1463, 1670, 2511
SmoI	CTYRAG	4 cut(s)	269, 1463, 1670, 2511
SpeI	ACTAGT	1 cut(s)	2426
SphI	GCATGC	1 cut(s)	1931
SsiI	CCGC	4 cut(s)	154, 1318, 2049, 2088
SspMI	CTAG	5 cut(s)	1064, 1136, 1331, 1553, 2427
StyD4I	CCNGG	7 cut(s)	883, 1249, 1864, 1869, 2017, 2497, 2802
StyI	CCWWGG	1 cut(s)	1773
TaaI	ACNGT	4 cut(s)	46, 631, 1099, 2853
TaiI	ACGT	2 cut(s)	1317, 2236
TaqI	TCGA	6 cut(s)	66, 319, 597, 625, 2032, 2639
TatI	WGTACW	1 cut(s)	1112
TfiI	GAWTC	9 cut(s)	776, 1355, 1917, 1954, 2010, 2027, 2339, 2550, 2858
TscAI	CASTG	2 cut(s)	51, 1543
TseFI	GTSAC	4 cut(s)	872, 1609, 2309, 2474
TseI	GCWGC	9 cut(s)	82, 111, 648, 1541, 2184, 2198, 2243, 2381, 2384
Tsp45I	GTSAC	4 cut(s)	872, 1609, 2309, 2474
TspDTI	ATGAA	9 cut(s)	47, 582, 606, 624, 1160, 1193, 1325, 1960, 2554
TspGWI	ACGGA	5 cut(s)	1097, 1348, 1671, 2168, 2220
TspRI	CASTG	2 cut(s)	51, 1543
Van91I	CCANNNNNTGG	1 cut(s)	1703
VpaK11BI	GGWCC	4 cut(s)	1012, 1385, 1732, 2649
VspI	ATTAAT	2 cut(s)	1377, 1785
XagI	CCTNNNNNAGG	1 cut(s)	2514
XapI	RAATTY	5 cut(s)	889, 1485, 1700, 1943, 2587
XbaI	TCTAGA	2 cut(s)	1135, 1330
XceI	RCATGY	3 cut(s)	1931, 2170, 2323
XmiI	GTMKAC	2 cut(s)	227, 2058
XmnI	GAANNNNTTC	2 cut(s)	711, 989
XspI	CTAG	5 cut(s)	1064, 1136, 1331, 1553, 2427
Zsp2I	ATGCAT	2 cut(s)	1246, 1933

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.