Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001809.1

Orthogroup ID

OG0002777

Physical Location & Seq

Genomic Coordinates Reverse (-)

18882 .. 25886

Gene Structure 7005 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001809.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2796 bp

atgggatggggaaacatttacagaaggcgtatgaaagtatgcacagtggcctttcttatatacctcgattacaaggctttgcagcaaagagacaaatggattagcaaacgctgcaaatctaaaagtgaggctttatgggaaagtgctcatgagcggaatgctaaacgagttctcaggttgatagtagagttggaaggtttgtgggtgaaacttgggcagtatctgtctacacgggcagatgttcttcctgaagcatatacatctcttctcaagcaattacaggactctcttccccctcgtcctttgcaagagatagcacaagtccatcgcgcaaccctgcttgatgggcaggaagtagttgttaaagttcagcatgagggcattaagacaatcatattggaggacttgaagaacgcaaagtcaattgttgactggatagcatgggcagagcctcagtataattttaatcctatgatagatgaatggtgcaaagaatgtccgaatgaactcgacttcaatcatgaagctgagaatactcgaacagtgtctaaaaatcttggctgcaaaaccaaacatgatgataacccaagtgccaataaagtggatgttttgataccagaagttattcagtcaacagagaaagtcctcatttcagagtttatggatggcattcgtttaaatgacatagaatcatttgaagcatttggtgtcaacaaacaaaaggttgttgaagaaatcacacgtgcatatgcccaccaaatatatgttgatggttttttcaatggtgaccctcatcctggaaattttcttgtgagcaaggaacctccacatcgtccaattttgctggactttggacttactaagaaattatcaagctctctaaaacaagcattagcgaagatgttcttggcttctgctgagggggaccatgttgctctattgtcggcttttgcagaaatgggacttaagttgcgcctagatataccagagcaggcaatggagataacaactgtattcttccgtagtacaacgccaccaaatgagtctcttgaaacgatgaaagctctggtggatcaaagagaaaaaaacatgaaggtcatacaggacaagatgcaacttaaccgaaaagaggttaaacgctttaatcctgttgatgcatttcctggtgatattgtgatttttgcgcgagtcctcaatcttctcagagggctttcttccataatgaacgtccgcattgtatatctagatatcatgagaccatttgctgaatccgttttacagggtagcattaataggggaccaatggtaaatgatcagtggatctatgacacacctgccctctctgatgtggaggcgaagctgaggcgactcctacttgagctggggaatgataataaaattcttggagttcaggtatgtgcctacaaagatggagaggttattattgacactgcagctggtgtgctaggtagatatgatccccgcccagttcagcccgacagcctttttccagttttttctgtgacaaagggtataacagctggaatgttacattggctggttgacaatggaaaattgaagcttgaggaaagtgttgcaagtatatggccagaatttggatcaaacagaaaggatctcataaaggtccatcatgtgcttaaccatacatctggattgcacaatgccttggcagatattaataaagaaaaccctttacttatgtctgactgggaggagtgtttaaatcgcatttccatgtcagtacctgagactgaacctggccaggagcagttgtatcactatctgtcttttgggtggatatgtggtggaatcattgagcatgcatcagggaaaaaatttaaggagattctggaagaagcattcatacaccccctacaaattgaaggggagttatatattggaatccctccaggtgtggaatctcgactggcaaccctaaccgctgatgtagacaatctgaagaaggtctcagggataagcggtcgtaaagacctaccttccacttttcagggggacaaccttgtgcaaattgtgagcatggtgcctcctctatttaacatgctgaacatccgtcgcagcatcatacccgcagctaacggacattgctcagcccgtgctcttgcacgttattatgcagccttagttgatggtggtgttgttccaccacctcatccctcttcctctaaaccagctctgggtagtcaccctcacatgcccaaatttcctgttgaatcgtcatccaaaaagcgaggtaacagaagcaagaagttagctgctgctttcaagttcaggactaagaaatatgagcaggcccctactagtgatcccgatgttggtagccccagtagaaacaatagcaacagtagtgacattagtaatgcaactgaccccggttccattcctcaagaaggtaatgtcaataagatattcagcaaccccagaatccatgatgctttcatgggtgctggcgaatatgcaaatttggccaagccagatggtacattcggacttgggttcaagagataccactcgaaggacgggtcccttattggctttgggcactcgggcatgggtggatcaactggcttctgtgatatcaaaaataggtttgctatttctgtaaccttgaataaaatgtcatttggtgccgaaactggaaaaatcatccattttgtttgttcggagttgaacatcccggtgccacaggattatttgagatttgcagagactccccctgagggacggttggattctggaagacctttgataaactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1 Beta-lactamase WaaY

Protein Analysis

931

Amino Acids

103.86

Weight (kDa)

7.35

Isoelectric Point (pI)

42.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24810 AT5G24810
fragaria_vesca	FvH4_2g36370 FvH4_2g36370 FvH4_2g36370 FvH4_2g36372
malus_domestica	MD08G1123100.v1.1 MD15G1100800.v1.1 MD15G1102100.v1.1
prunus_persica	Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1
pyrus_communis	pycom08g10200 pycom08g10210 pycom15g09330
rosa_chinensis	RchiOBHm_Chr6g0305511
rosa_laevigata	RLG00000010882 RLG00000010885
rosa_multiflora	Rmu_co8395109.1_g000001 Rmu_sc0001809.1_g000002 Rmu_sc0001809.1_g000004 Rmu_sc0029548.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162720 Rroxscaffold_7G00162740
rosa_rugosa	Rorug06G0340800.1 Rorug06G0341000 Rorug06G0341100
rosa_samantha	Rh6AG453000 Rh6AG453200 Rh6BG448600 Rh6BG448800 Rh6CG466700 Rh6CG467000 Rh6DG453400 Rh6DG453600
rosa_wichuraiana	Rw6G039470 Rw6G039490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1342
Acc36I	ACCTGC	1 cut(s)	1342
AccB1I	GGYRCC	3 cut(s)	2062, 2666, 2719
AccB7I	CCANNNNNTGG	1 cut(s)	1616
AccBSI	CCGCTC	1 cut(s)	154
AccI	GTMKAC	2 cut(s)	227, 1971
AccII	CGCG	2 cut(s)	330, 1186
AciI	CCGC	6 cut(s)	154, 1231, 1483, 1962, 2001, 2109
AclWI	GGATC	7 cut(s)	1080, 1328, 1472, 1627, 1641, 2339, 2605
AcoI	YGGCCR	3 cut(s)	1607, 1780, 2505
AcsI	RAATTY	6 cut(s)	802, 1398, 1613, 1856, 2240, 2500
AcuI	CTGAAG	2 cut(s)	270, 2000
AcvI	CACGTG	1 cut(s)	743
AfaI	GTAC	3 cut(s)	1027, 1764, 2521
AfiI	CCNNNNNNNGG	8 cut(s)	797, 1129, 1616, 2216, 2354, 2429, 2554, 2759
AflII	CTTAAG	1 cut(s)	965
AflIII	ACRYGT	1 cut(s)	740
AhlI	ACTAGT	1 cut(s)	2339
AjnI	CCWGG	5 cut(s)	796, 1162, 1777, 1782, 1930
AjuI	GAANNNNNNNTTGG	4 cut(s)	890, 922, 1537, 1569
Alw21I	GWGCWC	2 cut(s)	148, 2140
Alw26I	GTCTC	6 cut(s)	84, 1050, 1249, 1763, 1993, 2741
AlwI	GGATC	7 cut(s)	1080, 1328, 1472, 1627, 1641, 2339, 2605
AlwNI	CAGNNNCTG	2 cut(s)	223, 1766
Ama87I	CYCGRG	1 cut(s)	2584
AoxI	GGCC	5 cut(s)	48, 1607, 1780, 2331, 2505
ApeKI	GCWGC	9 cut(s)	82, 111, 561, 1454, 2097, 2111, 2156, 2294, 2297
ApoI	RAATTY	6 cut(s)	802, 1398, 1613, 1856, 2240, 2500
ArsI	GACNNNNNNTTYG	2 cut(s)	2546, 2578
AseI	ATTAAT	2 cut(s)	1290, 1698
Asp700I	GAANNNNTTC	2 cut(s)	624, 902
AspLEI	GCGC	3 cut(s)	332, 975, 1186
AspS9I	GGNCC	5 cut(s)	925, 1298, 1645, 2332, 2562
AsuC2I	CCSGG	2 cut(s)	2412, 2717
AsuHPI	GGTGA	4 cut(s)	217, 797, 1178, 2216
AvaI	CYCGRG	1 cut(s)	2584
AvaII	GGWCC	4 cut(s)	925, 1298, 1645, 2562
AxyI	CCTNAGG	1 cut(s)	2757
BaeGI	GKGCMC	1 cut(s)	2583
BalI	TGGCCA	3 cut(s)	1609, 1782, 2507
BanI	GGYRCC	3 cut(s)	2062, 2666, 2719
BarI	GAAGNNNNNNTAC	2 cut(s)	1869, 1901
BbrPI	CACGTG	1 cut(s)	743
BbsI	GAAGAC	1 cut(s)	2785
Bbv12I	GWGCWC	2 cut(s)	148, 2140
BbvCI	CCTCAGC	2 cut(s)	918, 1361
BbvI	GCAGC	9 cut(s)	94, 98, 548, 1466, 2109, 2123, 2168, 2281, 2284
BccI	CCATC	8 cut(s)	333, 338, 659, 764, 1424, 1656, 2162, 2510
BciT130I	CCWGG	5 cut(s)	798, 1164, 1779, 1784, 1932
BclI	TGATCA	1 cut(s)	1312
BcnI	CCSGG	2 cut(s)	2412, 2717
BcoDI	GTCTC	6 cut(s)	84, 1050, 1249, 1763, 1993, 2741
BcuI	ACTAGT	1 cut(s)	2339
BfaI	CTAG	4 cut(s)	977, 1244, 1466, 2340
BfmI	CTRYAG	1 cut(s)	1452
BfrI	CTTAAG	1 cut(s)	965
BfuAI	ACCTGC	1 cut(s)	1342
BisI	GCNGC	9 cut(s)	83, 112, 562, 1455, 2098, 2112, 2157, 2295, 2298
BlpI	GCTNAGC	1 cut(s)	2128
BlsI	GCNGC	9 cut(s)	84, 113, 563, 1456, 2099, 2113, 2158, 2296, 2299
Bme1390I	CCNGG	7 cut(s)	798, 1164, 1779, 1784, 1932, 2412, 2717
Bme18I	GGWCC	4 cut(s)	925, 1298, 1645, 2562
BmeT110I	CYCGRG	1 cut(s)	2584
BmgT120I	GGNCC	5 cut(s)	925, 1298, 1645, 2332, 2562
BmrFI	CCNGG	7 cut(s)	798, 1164, 1779, 1784, 1932, 2412, 2717
BmrI	ACTGGG	3 cut(s)	1481, 1738, 2358
BmsI	GCATC	5 cut(s)	1101, 1144, 1853, 2109, 2461
BmuI	ACTGGG	3 cut(s)	1481, 1738, 2358
BpiI	GAAGAC	1 cut(s)	2785
BpmI	CTGGAG	1 cut(s)	1914
Bpu10I	CCTNAGC	2 cut(s)	918, 1361
Bpu1102I	GCTNAGC	1 cut(s)	2128
BpuEI	CTTGAG	4 cut(s)	254, 1397, 1604, 2409
BpuMI	CCSGG	2 cut(s)	2412, 2717
BsaAI	YACGTR	1 cut(s)	743
BsaI	GGTCTC	2 cut(s)	1249, 1993
BsaJI	CCNNGG	2 cut(s)	1686, 2410
BsaXI	ACNNNNNCTCC	4 cut(s)	1398, 1428, 1778, 1808
Bsc4I	CCNNNNNNNGG	8 cut(s)	797, 1129, 1616, 2216, 2354, 2429, 2554, 2759
Bse1I	ACTGG	8 cut(s)	437, 1487, 1511, 1733, 1953, 2364, 2608, 2680
Bse21I	CCTNAGG	1 cut(s)	2757
Bse3DI	GCAATG	2 cut(s)	1002, 2122
BseBI	CCWGG	5 cut(s)	798, 1164, 1779, 1784, 1932
BseDI	CCNNGG	2 cut(s)	1686, 2410
BseGI	GGATG	9 cut(s)	11, 610, 670, 793, 2088, 2191, 2258, 2685, 2712
BseLI	CCNNNNNNNGG	8 cut(s)	797, 1129, 1616, 2216, 2354, 2429, 2554, 2759
BseMI	GCAATG	2 cut(s)	1002, 2122
BseNI	ACTGG	8 cut(s)	437, 1487, 1511, 1733, 1953, 2364, 2608, 2680
BseRI	GAGGAG	2 cut(s)	1748, 2058
BseSI	GKGCMC	1 cut(s)	2583
BseXI	GCAGC	9 cut(s)	94, 98, 548, 1466, 2109, 2123, 2168, 2281, 2284
BseYI	CCCAGC	1 cut(s)	1381
Bsh1236I	CGCG	2 cut(s)	330, 1186
Bsh1285I	CGRYCG	1 cut(s)	2005
BshFI	GGCC	5 cut(s)	50, 1609, 1782, 2333, 2507
BshNI	GGYRCC	3 cut(s)	2062, 2666, 2719
BsiEI	CGRYCG	1 cut(s)	2005
BsiHKAI	GWGCWC	2 cut(s)	148, 2140
BsiHKCI	CYCGRG	1 cut(s)	2584
BsiSI	CCGG	2 cut(s)	2412, 2717
BslFI	GGGAC	6 cut(s)	938, 975, 1311, 2048, 2548, 2775
BslI	CCNNNNNNNGG	8 cut(s)	797, 1129, 1616, 2216, 2354, 2429, 2554, 2759
BsmAI	GTCTC	6 cut(s)	84, 1050, 1249, 1763, 1993, 2741
BsmFI	GGGAC	6 cut(s)	938, 975, 1311, 2048, 2548, 2775
BsmI	GAATGC	3 cut(s)	163, 669, 1880
BsnI	GGCC	5 cut(s)	50, 1609, 1782, 2333, 2507
Bso31I	GGTCTC	2 cut(s)	1249, 1993
BsoBI	CYCGRG	1 cut(s)	2584
Bsp1286I	GDGCHC	3 cut(s)	148, 2140, 2583
Bsp143I	GATC	8 cut(s)	1072, 1312, 1320, 1477, 1619, 1633, 2344, 2597
Bsp1720I	GCTNAGC	1 cut(s)	2128
BspACI	CCGC	6 cut(s)	154, 1231, 1483, 1962, 2001, 2109
BspANI	GGCC	5 cut(s)	50, 1609, 1782, 2333, 2507
BspFNI	CGCG	2 cut(s)	330, 1186
BspHI	TCATGA	3 cut(s)	148, 520, 1251
BspMAI	CTGCAG	1 cut(s)	1456
BspMI	ACCTGC	1 cut(s)	1342
BspPI	GGATC	7 cut(s)	1080, 1328, 1472, 1627, 1641, 2339, 2605
BspT107I	GGYRCC	3 cut(s)	2062, 2666, 2719
BspTI	CTTAAG	1 cut(s)	965
BspTNI	GGTCTC	2 cut(s)	1249, 1993
BsrBI	CCGCTC	1 cut(s)	154
BsrDI	GCAATG	2 cut(s)	1002, 2122
BsrI	ACTGG	8 cut(s)	437, 1487, 1511, 1733, 1953, 2364, 2608, 2680
BssECI	CCNNGG	2 cut(s)	1686, 2410
BssMI	GATC	8 cut(s)	1072, 1312, 1320, 1477, 1619, 1633, 2344, 2597
BssT1I	CCWWGG	1 cut(s)	1686
Bst2UI	CCWGG	5 cut(s)	798, 1164, 1779, 1784, 1932
Bst4CI	ACNGT	5 cut(s)	46, 544, 1012, 2384, 2766
Bst6I	CTCTTC	3 cut(s)	270, 294, 2203
BstAFI	CTTAAG	1 cut(s)	965
BstAPI	GCANNNNNTGC	1 cut(s)	111
BstBAI	YACGTR	1 cut(s)	743
BstC8I	GCNNGC	4 cut(s)	993, 1842, 2331, 2488
BstEII	GGTNACC	1 cut(s)	785
BstENI	CCTNNNNNAGG	1 cut(s)	2427
BstF5I	GGATG	9 cut(s)	11, 610, 670, 793, 2088, 2191, 2258, 2685, 2712
BstFNI	CGCG	2 cut(s)	330, 1186
BstHHI	GCGC	3 cut(s)	332, 975, 1186
BstKTI	GATC	8 cut(s)	1075, 1315, 1323, 1480, 1622, 1636, 2347, 2600
BstMAI	GTCTC	6 cut(s)	84, 1050, 1249, 1763, 1993, 2741
BstMBI	GATC	8 cut(s)	1072, 1312, 1320, 1477, 1619, 1633, 2344, 2597
BstMCI	CGRYCG	1 cut(s)	2005
BstMWI	GCNNNNNNNGC	3 cut(s)	111, 346, 2504
BstNI	CCWGG	5 cut(s)	798, 1164, 1779, 1784, 1932
BstNSI	RCATGY	3 cut(s)	1844, 2083, 2236
BstPI	GGTNACC	1 cut(s)	785
BstSCI	CCNGG	7 cut(s)	796, 1162, 1777, 1782, 1930, 2410, 2715
BstSFI	CTRYAG	1 cut(s)	1452
BstSLI	GKGCMC	1 cut(s)	2583
BstUI	CGCG	2 cut(s)	330, 1186
BstV1I	GCAGC	9 cut(s)	94, 98, 548, 1466, 2109, 2123, 2168, 2281, 2284
BstV2I	GAAGAC	1 cut(s)	2785
BstX2I	RGATCY	2 cut(s)	1320, 1633
BstXI	CCANNNNNNTGG	2 cut(s)	601, 1670
BstYI	RGATCY	2 cut(s)	1320, 1633
Bsu36I	CCTNAGG	1 cut(s)	2757
BsuRI	GGCC	5 cut(s)	50, 1609, 1782, 2333, 2507
BtgZI	GCGATG	1 cut(s)	311
BtsCI	GGATG	9 cut(s)	11, 610, 670, 793, 2088, 2191, 2258, 2685, 2712
BtsI	GCAGTG	1 cut(s)	1449
BtsIMutI	CAGTG	4 cut(s)	51, 549, 1322, 1449
BveI	ACCTGC	1 cut(s)	1342
Cac8I	GCNNGC	4 cut(s)	993, 1842, 2331, 2488
CaiI	CAGNNNCTG	2 cut(s)	223, 1766
CciI	TCATGA	3 cut(s)	148, 520, 1251
CfoI	GCGC	3 cut(s)	332, 975, 1186
Cfr13I	GGNCC	5 cut(s)	925, 1298, 1645, 2332, 2562
Csp6I	GTAC	3 cut(s)	1026, 1763, 2520
CviQI	GTAC	3 cut(s)	1026, 1763, 2520
DpnI	GATC	8 cut(s)	1074, 1314, 1322, 1479, 1621, 1635, 2346, 2599
DpnII	GATC	8 cut(s)	1072, 1312, 1320, 1477, 1619, 1633, 2344, 2597
DraI	TTTAAA	2 cut(s)	678, 1743
EaeI	YGGCCR	3 cut(s)	1607, 1780, 2505
Eam1104I	CTCTTC	3 cut(s)	270, 294, 2203
EarI	CTCTTC	3 cut(s)	270, 294, 2203
Eco130I	CCWWGG	1 cut(s)	1686
Eco31I	GGTCTC	2 cut(s)	1249, 1993
Eco32I	GATATC	2 cut(s)	1249, 2617
Eco47I	GGWCC	4 cut(s)	925, 1298, 1645, 2562
Eco57I	CTGAAG	2 cut(s)	270, 2000
Eco72I	CACGTG	1 cut(s)	743
Eco81I	CCTNAGG	1 cut(s)	2757
Eco88I	CYCGRG	1 cut(s)	2584
Eco91I	GGTNACC	1 cut(s)	785
EcoNI	CCTNNNNNAGG	1 cut(s)	2427
EcoO109I	RGGNCCY	2 cut(s)	2332, 2562
EcoO65I	GGTNACC	1 cut(s)	785
EcoRII	CCWGG	5 cut(s)	796, 1162, 1777, 1782, 1930
EcoRV	GATATC	2 cut(s)	1249, 2617
EcoT14I	CCWWGG	1 cut(s)	1686
EcoT22I	ATGCAT	2 cut(s)	1159, 1846
ErhI	CCWWGG	1 cut(s)	1686
FalI	AAGNNNNNCTT	4 cut(s)	115, 147, 890, 922
FaqI	GGGAC	6 cut(s)	938, 975, 1311, 2048, 2548, 2775
FauI	CCCGC	2 cut(s)	1490, 2116
FauNDI	CATATG	1 cut(s)	748
FbaI	TGATCA	1 cut(s)	1312
FblI	GTMKAC	2 cut(s)	227, 1971
Fnu4HI	GCNGC	9 cut(s)	83, 112, 562, 1455, 2098, 2112, 2157, 2295, 2298
FokI	GGATG	9 cut(s)	18, 617, 677, 780, 2075, 2178, 2245, 2672, 2699
Fsp4HI	GCNGC	9 cut(s)	83, 112, 562, 1455, 2098, 2112, 2157, 2295, 2298
FspBI	CTAG	4 cut(s)	977, 1244, 1466, 2340
GlaI	GCGC	3 cut(s)	331, 974, 1185
GluI	GCNGC	9 cut(s)	83, 112, 562, 1455, 2098, 2112, 2157, 2295, 2298
GsaI	CCCAGC	1 cut(s)	1385
GsuI	CTGGAG	1 cut(s)	1914
HaeIII	GGCC	5 cut(s)	50, 1609, 1782, 2333, 2507
HapII	CCGG	2 cut(s)	2412, 2717
HhaI	GCGC	3 cut(s)	332, 975, 1186
Hin6I	GCGC	3 cut(s)	330, 973, 1184
HinP1I	GCGC	3 cut(s)	330, 973, 1184
HincII	GTYRAC	4 cut(s)	430, 633, 712, 1564
HindII	GTYRAC	4 cut(s)	430, 633, 712, 1564
HindIII	AAGCTT	1 cut(s)	1580
HpaII	CCGG	2 cut(s)	2412, 2717
HphI	GGTGA	4 cut(s)	217, 797, 1178, 2216
Hpy166II	GTNNAC	6 cut(s)	228, 430, 633, 712, 1564, 1972
Hpy188I	TCNGA	8 cut(s)	501, 655, 1205, 1345, 1726, 1980, 2528, 2704
Hpy8I	GTNNAC	6 cut(s)	228, 430, 633, 712, 1564, 1972
Hpy99I	CGWCG	1 cut(s)	2097
HpyAV	CCTTC	8 cut(s)	18, 188, 1087, 1898, 1978, 2028, 2423, 2548
HpyCH4III	ACNGT	5 cut(s)	46, 544, 1012, 2384, 2766
HpyCH4IV	ACGT	3 cut(s)	742, 1227, 2146
HpyF10VI	GCNNNNNNNGC	3 cut(s)	111, 346, 2504
HpySE526I	ACGT	3 cut(s)	742, 1227, 2146
HspAI	GCGC	3 cut(s)	330, 973, 1184
KflI	GGGWCCC	1 cut(s)	2562
Ksp22I	TGATCA	1 cut(s)	1312
Kzo9I	GATC	8 cut(s)	1072, 1312, 1320, 1477, 1619, 1633, 2344, 2597
LmnI	GCTCC	1 cut(s)	1786
Lsp1109I	GCAGC	9 cut(s)	94, 98, 548, 1466, 2109, 2123, 2168, 2281, 2284
LweI	GCATC	5 cut(s)	1101, 1144, 1853, 2109, 2461
MaeI	CTAG	4 cut(s)	977, 1244, 1466, 2340
MaeII	ACGT	3 cut(s)	742, 1227, 2146
MaeIII	GTNAC	7 cut(s)	785, 1522, 1548, 2222, 2273, 2387, 2641
MalI	GATC	8 cut(s)	1074, 1314, 1322, 1479, 1621, 1635, 2346, 2599
MbiI	CCGCTC	1 cut(s)	154
MboI	GATC	8 cut(s)	1072, 1312, 1320, 1477, 1619, 1633, 2344, 2597
MfeI	CAATTG	1 cut(s)	423
MflI	RGATCY	2 cut(s)	1320, 1633
MhlI	GDGCHC	3 cut(s)	148, 2140, 2583
MlsI	TGGCCA	3 cut(s)	1609, 1782, 2507
MluNI	TGGCCA	3 cut(s)	1609, 1782, 2507
MlyI	GAGTC	5 cut(s)	278, 1052, 1197, 1362, 2743
MmeI	TCCRAC	2 cut(s)	171, 2748
Mox20I	TGGCCA	3 cut(s)	1609, 1782, 2507
Mph1103I	ATGCAT	2 cut(s)	1159, 1846
MroXI	GAANNNNTTC	2 cut(s)	624, 902
MscI	TGGCCA	3 cut(s)	1609, 1782, 2507
MslI	CAYNNNNRTG	2 cut(s)	1754, 2717
Msp20I	TGGCCA	3 cut(s)	1609, 1782, 2507
MspA1I	CMGCKG	3 cut(s)	1457, 1541, 1964
MspCI	CTTAAG	1 cut(s)	965
MspI	CCGG	2 cut(s)	2412, 2717
MspR9I	CCNGG	7 cut(s)	798, 1164, 1779, 1784, 1932, 2412, 2717
MunI	CAATTG	1 cut(s)	423
Mva1269I	GAATGC	3 cut(s)	163, 669, 1880
MvaI	CCWGG	5 cut(s)	798, 1164, 1779, 1784, 1932
MvnI	CGCG	2 cut(s)	330, 1186
MwoI	GCNNNNNNNGC	3 cut(s)	111, 346, 2504
NciI	CCSGG	2 cut(s)	2412, 2717
NdeI	CATATG	1 cut(s)	748
NdeII	GATC	8 cut(s)	1072, 1312, 1320, 1477, 1619, 1633, 2344, 2597
NmuCI	GTSAC	4 cut(s)	785, 1522, 2222, 2387
NsiI	ATGCAT	2 cut(s)	1159, 1846
NspI	RCATGY	3 cut(s)	1844, 2083, 2236
PaeI	GCATGC	1 cut(s)	1844
PagI	TCATGA	3 cut(s)	148, 520, 1251
PaqCI	CACCTGC	1 cut(s)	1342
PctI	GAATGC	3 cut(s)	163, 669, 1880
PdmI	GAANNNNTTC	2 cut(s)	624, 902
PfeI	GAWTC	9 cut(s)	689, 1268, 1830, 1867, 1923, 1940, 2252, 2463, 2771
PflMI	CCANNNNNTGG	1 cut(s)	1616
PfoI	TCCNGGA	1 cut(s)	796
PkrI	GCNGC	9 cut(s)	84, 113, 563, 1456, 2099, 2113, 2158, 2296, 2299
PleI	GAGTC	5 cut(s)	278, 1051, 1196, 1362, 2743
PmaCI	CACGTG	1 cut(s)	743
PmlI	CACGTG	1 cut(s)	743
PpsI	GAGTC	5 cut(s)	278, 1051, 1196, 1362, 2743
Ppu21I	YACGTR	1 cut(s)	743
PpuMI	RGGWCCY	1 cut(s)	2562
PshBI	ATTAAT	2 cut(s)	1290, 1698
Psp5II	RGGWCCY	1 cut(s)	2562
Psp6I	CCWGG	5 cut(s)	796, 1162, 1777, 1782, 1930
PspCI	CACGTG	1 cut(s)	743
PspEI	GGTNACC	1 cut(s)	785
PspFI	CCCAGC	1 cut(s)	1381
PspGI	CCWGG	5 cut(s)	796, 1162, 1777, 1782, 1930
PspPI	GGNCC	5 cut(s)	925, 1298, 1645, 2332, 2562
PspPPI	RGGWCCY	1 cut(s)	2562
PstI	CTGCAG	1 cut(s)	1456
PstNI	CAGNNNCTG	2 cut(s)	223, 1766
PsuI	RGATCY	2 cut(s)	1320, 1633
PvuII	CAGCTG	2 cut(s)	1457, 1541
RsaI	GTAC	3 cut(s)	1027, 1764, 2521
RsaNI	GTAC	3 cut(s)	1026, 1763, 2520
RseI	CAYNNNNRTG	2 cut(s)	1754, 2717
SatI	GCNGC	9 cut(s)	83, 112, 562, 1455, 2098, 2112, 2157, 2295, 2298
Sau3AI	GATC	8 cut(s)	1072, 1312, 1320, 1477, 1619, 1633, 2344, 2597
Sau96I	GGNCC	5 cut(s)	925, 1298, 1645, 2332, 2562
SchI	GAGTC	5 cut(s)	278, 1052, 1197, 1362, 2743
ScrFI	CCNGG	7 cut(s)	798, 1164, 1779, 1784, 1932, 2412, 2717
SduI	GDGCHC	3 cut(s)	148, 2140, 2583
SfaNI	GCATC	5 cut(s)	1101, 1144, 1853, 2109, 2461
SfcI	CTRYAG	1 cut(s)	1452
SinI	GGWCC	4 cut(s)	925, 1298, 1645, 2562
SmiMI	CAYNNNNRTG	2 cut(s)	1754, 2717
SmlI	CTYRAG	5 cut(s)	269, 965, 1376, 1583, 2424
SmoI	CTYRAG	5 cut(s)	269, 965, 1376, 1583, 2424
SpeI	ACTAGT	1 cut(s)	2339
SphI	GCATGC	1 cut(s)	1844
SsiI	CCGC	6 cut(s)	154, 1231, 1483, 1962, 2001, 2109
SspMI	CTAG	4 cut(s)	977, 1244, 1466, 2340
StyD4I	CCNGG	7 cut(s)	796, 1162, 1777, 1782, 1930, 2410, 2715
StyI	CCWWGG	1 cut(s)	1686
TaaI	ACNGT	5 cut(s)	46, 544, 1012, 2384, 2766
TaiI	ACGT	3 cut(s)	745, 1230, 2149
TaqI	TCGA	5 cut(s)	66, 510, 538, 1945, 2552
TatI	WGTACW	1 cut(s)	1025
TfiI	GAWTC	9 cut(s)	689, 1268, 1830, 1867, 1923, 1940, 2252, 2463, 2771
TscAI	CASTG	4 cut(s)	51, 549, 1322, 1456
TseFI	GTSAC	4 cut(s)	785, 1522, 2222, 2387
TseI	GCWGC	9 cut(s)	82, 111, 561, 1454, 2097, 2111, 2156, 2294, 2297
Tsp45I	GTSAC	4 cut(s)	785, 1522, 2222, 2387
TspDTI	ATGAA	9 cut(s)	47, 495, 519, 537, 1073, 1106, 1238, 1873, 2467
TspGWI	ACGGA	4 cut(s)	1010, 1261, 2081, 2133
TspRI	CASTG	4 cut(s)	51, 549, 1322, 1456
Van91I	CCANNNNNTGG	1 cut(s)	1616
Vha464I	CTTAAG	1 cut(s)	965
VpaK11BI	GGWCC	4 cut(s)	925, 1298, 1645, 2562
VspI	ATTAAT	2 cut(s)	1290, 1698
XagI	CCTNNNNNAGG	1 cut(s)	2427
XapI	RAATTY	6 cut(s)	802, 1398, 1613, 1856, 2240, 2500
XbaI	TCTAGA	1 cut(s)	1243
XceI	RCATGY	3 cut(s)	1844, 2083, 2236
XmiI	GTMKAC	2 cut(s)	227, 1971
XmnI	GAANNNNTTC	2 cut(s)	624, 902
XspI	CTAG	4 cut(s)	977, 1244, 1466, 2340
Zsp2I	ATGCAT	2 cut(s)	1159, 1846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.