Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002777

Physical Location & Seq

Genomic Coordinates Forward (+)

6086858 .. 6092856

Gene Structure 5999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g09330.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2814 bp

ATGGGATGGGGAAACATCTACAAAAGACGCATGAAAGTGTGCACAGTTGCTTTTCTGATATACCTAGATTACAAGCAAAGAGAGAAATGGACTAACAAAACTAAAACAGATGGTTTATGGGAAAATGCGCATAAGCGAAATGCTAAACGTGTTCTCAGTTTGATAGTGGAGTTGGAAGGTTTGTGGGTGAAACTTGGGCAGTATCTGTCTACACGGGCAGATGTACTTCCTGAGGCATACATATGCCTTCTCAAGCAATTACAGGACTCTCTTCCTCCTCGTCCTTTGGAAGAGGTTTGTCAAACTATACAGAAAGAGTTGGGGAAGTCAATGAATGAGTTGTTCTTAGATTTTGTGGATGTTCCTTTGGCAACAGCATCAATAGCACAAGTCCACCGTGCCACCCTGCGCAACGGGCGGGAAGTAGTTGTTAAAGTTCAACATGAGGGCATCAAGACAATTATATTGGAGGACTTGAAGAATGCAAAGTCAATTGTTGACTGGATAGCATGGGCAGAGCCTCAGTACAATTTTAATCCTATGATGGATGAATGGTGCAAAGAATCTCCCAAAGAACTTGACTTCAATCAAGAAGCTGAGAACACCAGAACAGTGGCTAAAAATCTTGGCTGCGATACCAAATGTGATGATAACACACGTGCCGATCGAGTGGATGTCTTGATTCCAGACGTTATTCAGTCAACAGAGAAAGTCCTCATTTCAGAGTTTATGGATGGTATTCGTATAAATGACATAGAAGCGCTGGAAGAATTTGGTGTTGACAAACAAAAGGTTGTTGAAGAAATCACACGAAACTTTCTTGTGAGCAAGGAACCTCCATATCGTCCTATTTTGCTTGATTTTGGGCTTACAAAGAAATTATCAAGCTCTTTTAAAAAAGCACTTGCAAAGATGTTCTTGGCAGCTACCGAGGGGGACCATGTTGCTCTATTGTCTGCTTTTGCAGAAATGGGACTTAAGTTGCGCCTTGATATTCCAGAGCAGGCAATGGAAATAACAAGTGTATTATTCCGAAGTACAACACCTGCCAAAGAGTCTCATGAAACAATGAAATCTTTGGCGGATCAAAGAGCAAAAAACATGAAGGTTATACAGGACAAGATGCAACTTAACCAGAAGGAGGCTAAACGCTTTAATCCTGTAGATGCATTCCCTGGTGATATTGTAATCTTTTCACGAGTTCTCAATCTTCTCAGAGGGCTTTCTTCCACAATGAATGTCCGGATTGTTTATCAAGAGATCATGAGACCATTTGCTGAATCCGTTCTACAAGGAAACATTAGTAGGGGACCAATGGAAAATGATCACTGGGTCTATGACACACCTGCCCACTCTAATGTGGAGGCCAAGCTGAGGCACCTCCTAGTTGAGCTGGGGAATAACAATAAAATACTTGGAGTCCAGGTATGTGCCTACAAAGACGGGGAAGTTATTATTGACACTGCTGCTGGAGTGCTTGGTAGGTATGATCCTCGTCCAGTTCAGCCCGACAGCCTTTTCCCAGTTTTTTCTGTTACAAAGGGTATAACGGCTGGAATGTTACATTGGCTGGTAGACACTGGAAAATTGAACCTCGAGGAAGATGTAGCAAATATATGGCCAGAATTTGGATCATGTGGAAAACATAACATAAAGGTCCATCATGTCCTTAACCATACCTCTGGACTGCACAACGCCGTGGCAGACCTCATAGAAAACCCTTTGCTTATCTCAGACTGGGAGGACTGTTTAAACCGCGTTGCCCTTTCAGAACCTGAGACTGAACCTGGCCAGGAGCAGCTGTATCACTACCTAACTTTTGGTTGGATATGCGGTGGAATCATTGAGCATGCATCGAAGAGGAAATTCAAGGAGATTCTTGAAGAAGCATTTGTTCGTTCCCTCCAAATAGAAGGGGAGTTTTATATCGGAATACCTCCAGGTGTGGAATCTCGACTTGCAACCCTTACACCTGATACAGGAGACCTGAAGAAGCTTTCAGGAATTAGGGGCCGTCCTGATATGCCCTCCACTTTCCAGCCAGAGCAATTCGCAACTGCATTGCCCGTTCTATTTAACATGCTAAACGTTCGTCGTGCCATGATACCTGCAGCTAATGGACATTTCTCAGCCCGTGCACTTGCACGTTACTATGCAGCCTTAGCTGATGCCGGTGTTGTTCCACCGCCTCACTCCTCTTCCTCTAAGCCAGCTCTTGGTAGCCACCCTCACATTCCCAAATTTCCTGCTCAACCGTCACCAAAACAGCAGAAAGGTAACAGAAGCAAGAAGATAGCTGCTGCTTTTAGGAATATGAGAACTAATACGTATGAGAAGACTACACAAGATAGCAAGGACCACGACATTGGTAGTCACAGTAGAAACACGAGCAGTGACAGTAACACTTGCAACGCAAGTGACACCGTGCTGGATGAGGTCGTTGTGAATCCTAATCCTCAAAAGGACGGCGCTAAGATATTTAGCAACCCCAGAATTCATGATGCTTTCATGGGTGTTGGCGAATATGCAAACTTGGTTAAACCAGATGGGAAATTTGGACTGGGATTTAGAAGGTATTATTCCCAGGACGGGTCCCTTATTGGCTTTGGCCACTCAGGAATGGGTGGCTCAACTGCTTTCTGTGACATAAAAAATAGGCTCTCCATTGCTGTAACGTTGAATAAAATGGTGTTTGGTGCAGAGACCGGAAAGATAGTCCACTTCATTTGTTCAGAGTTAAATATTCCGGTGCCGGCGGATTATTTGAGATTCGCAGAAACGGCACCTAGTGATGGAAAACCTCTGATTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1 Beta-lactamase WaaY

Protein Analysis

938

Amino Acids

104.73

Weight (kDa)

6.7

Isoelectric Point (pI)

40.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24810 AT5G24810
fragaria_vesca	FvH4_2g36370 FvH4_2g36370 FvH4_2g36370 FvH4_2g36372
malus_domestica	MD08G1123100.v1.1 MD15G1100800.v1.1 MD15G1102100.v1.1
prunus_persica	Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1
pyrus_communis	pycom08g10200 pycom08g10210 pycom15g09330
rosa_chinensis	RchiOBHm_Chr6g0305511
rosa_laevigata	RLG00000010882 RLG00000010885
rosa_multiflora	Rmu_co8395109.1_g000001 Rmu_sc0001809.1_g000002 Rmu_sc0001809.1_g000004 Rmu_sc0029548.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162720 Rroxscaffold_7G00162740
rosa_rugosa	Rorug06G0340800.1 Rorug06G0341000 Rorug06G0341100
rosa_samantha	Rh6AG453000 Rh6AG453200 Rh6BG448600 Rh6BG448800 Rh6CG466700 Rh6CG467000 Rh6DG453400 Rh6DG453600
rosa_wichuraiana	Rw6G039470 Rw6G039490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1054, 1354
AbsI	CCTCGAGG	1 cut(s)	1595
Acc16I	TGCGCA	2 cut(s)	129, 410
Acc36I	ACCTGC	3 cut(s)	1054, 1354, 2116
AccB1I	GGYRCC	3 cut(s)	1377, 2749, 2782
AccB7I	CCANNNNNTGG	2 cut(s)	1628, 2216
AccI	GTMKAC	2 cut(s)	209, 1575
AccII	CGCG	1 cut(s)	1758
AccIII	TCCGGA	1 cut(s)	1242
AciI	CCGC	6 cut(s)	418, 1082, 1756, 1833, 2186, 2756
AclI	AACGTT	2 cut(s)	2088, 2675
AclWI	GGATC	3 cut(s)	1092, 1484, 1639
AcoI	YGGCCR	3 cut(s)	1619, 1789, 2608
AcsI	RAATTY	6 cut(s)	770, 1625, 1865, 2240, 2493, 2552
AcuI	CTGAAG	1 cut(s)	2009
AcvI	CACGTG	1 cut(s)	659
AdeI	CACNNNGTG	1 cut(s)	2789
AfaI	GTAC	3 cut(s)	225, 527, 1039
AfeI	AGCGCT	1 cut(s)	762
AfiI	CCNNNNNNNGG	7 cut(s)	1141, 1374, 1628, 1979, 2216, 2589, 2792
AflII	CTTAAG	1 cut(s)	977
AflIII	ACRYGT	2 cut(s)	148, 656
AgsI	TTSAA	8 cut(s)	440, 478, 586, 800, 1591, 1870, 1883, 2680
AjnI	CCWGG	6 cut(s)	1174, 1422, 1786, 1791, 1939, 2583
AjuI	GAANNNNNNNTTGG	2 cut(s)	1549, 1581
Alw21I	GWGCWC	2 cut(s)	44, 2140
Alw26I	GTCTC	5 cut(s)	1062, 1261, 1772, 1977, 2696
Alw44I	GTGCAC	2 cut(s)	40, 2136
AlwI	GGATC	3 cut(s)	1092, 1484, 1639
AlwNI	CAGNNNCTG	2 cut(s)	205, 1775
Ama87I	CYCGRG	1 cut(s)	1595
Aor13HI	TCCGGA	1 cut(s)	1242
Aor51HI	AGCGCT	1 cut(s)	762
AoxI	GGCC	5 cut(s)	1365, 1619, 1789, 2011, 2608
ApaLI	GTGCAC	2 cut(s)	40, 2136
ApeKI	GCWGC	8 cut(s)	630, 923, 1466, 1798, 2111, 2156, 2297, 2300
ApoI	RAATTY	6 cut(s)	770, 1625, 1865, 2240, 2493, 2552
AseI	ATTAAT	1 cut(s)	2808
Asp700I	GAANNNNTTC	1 cut(s)	1284
AspLEI	GCGC	5 cut(s)	130, 411, 763, 987, 2471
AspS9I	GGNCC	6 cut(s)	937, 1310, 1657, 2011, 2356, 2592
AsuHPI	GGTGA	3 cut(s)	199, 1190, 2250
AvaI	CYCGRG	1 cut(s)	1595
AvaII	GGWCC	5 cut(s)	937, 1310, 1657, 2356, 2592
AxyI	CCTNAGG	1 cut(s)	231
BaeGI	GKGCMC	2 cut(s)	44, 2140
BalI	TGGCCA	3 cut(s)	1621, 1791, 2610
BanI	GGYRCC	3 cut(s)	1377, 2749, 2782
BauI	CACGAG	2 cut(s)	1197, 2386
BbrPI	CACGTG	1 cut(s)	659
BbsI	GAAGAC	1 cut(s)	2342
Bbv12I	GWGCWC	2 cut(s)	44, 2140
BbvCI	CCTCAGC	1 cut(s)	1373
BbvI	GCAGC	8 cut(s)	617, 935, 1453, 1810, 2123, 2168, 2284, 2287
BccI	CCATC	6 cut(s)	104, 538, 728, 1668, 2540, 2786
BceAI	ACGGC	5 cut(s)	1566, 1682, 1998, 2482, 2796
BciT130I	CCWGG	6 cut(s)	1176, 1424, 1788, 1793, 1941, 2585
BclI	TGATCA	1 cut(s)	1324
BcoDI	GTCTC	5 cut(s)	1062, 1261, 1772, 1977, 2696
BfaI	CTAG	3 cut(s)	65, 1385, 2787
BfmI	CTRYAG	2 cut(s)	1161, 2109
BfoI	RGCGCY	2 cut(s)	764, 2472
BfrI	CTTAAG	1 cut(s)	977
BfuAI	ACCTGC	3 cut(s)	1054, 1354, 2116
BisI	GCNGC	8 cut(s)	631, 924, 1467, 1799, 2112, 2157, 2298, 2301
BlsI	GCNGC	8 cut(s)	632, 925, 1468, 1800, 2113, 2158, 2299, 2302
Bme1390I	CCNGG	6 cut(s)	1176, 1424, 1788, 1793, 1941, 2585
Bme18I	GGWCC	5 cut(s)	937, 1310, 1657, 2356, 2592
BmeT110I	CYCGRG	1 cut(s)	1595
BmgT120I	GGNCC	6 cut(s)	937, 1310, 1657, 2011, 2356, 2592
BmiI	GGNNCC	9 cut(s)	834, 938, 1311, 1379, 2012, 2593, 2594, 2751, 2784
BmrFI	CCNGG	6 cut(s)	1176, 1424, 1788, 1793, 1941, 2585
BmrI	ACTGGG	4 cut(s)	1339, 1517, 1747, 2570
BmsI	GCATC	7 cut(s)	386, 459, 1113, 1156, 1862, 2158, 2491
BmuI	ACTGGG	4 cut(s)	1339, 1517, 1747, 2570
BpiI	GAAGAC	1 cut(s)	2342
BpmI	CTGGAG	2 cut(s)	1491, 1923
Bpu10I	CCTNAGC	2 cut(s)	1373, 2161
BpuEI	CTTGAG	1 cut(s)	236
BsaAI	YACGTR	2 cut(s)	659, 2328
BsaI	GGTCTC	3 cut(s)	1261, 1977, 2696
BsaJI	CCNNGG	4 cut(s)	930, 1174, 1698, 2583
BsaWI	WCCGGW	3 cut(s)	1242, 2705, 2746
BsaXI	ACNNNNNCTCC	4 cut(s)	1410, 1440, 1787, 1817
Bsc4I	CCNNNNNNNGG	7 cut(s)	1141, 1374, 1628, 1979, 2216, 2589, 2792
Bse118I	RCCGGY	2 cut(s)	2171, 2752
Bse1I	ACTGG	7 cut(s)	506, 1334, 1499, 1523, 1585, 1742, 2565
Bse21I	CCTNAGG	1 cut(s)	231
Bse3DI	GCAATG	3 cut(s)	1014, 2060, 2664
BseAI	TCCGGA	1 cut(s)	1242
BseBI	CCWGG	6 cut(s)	1176, 1424, 1788, 1793, 1941, 2585
BseDI	CCNNGG	4 cut(s)	930, 1174, 1698, 2583
BseGI	GGATG	6 cut(s)	11, 364, 553, 679, 739, 2437
BseLI	CCNNNNNNNGG	7 cut(s)	1141, 1374, 1628, 1979, 2216, 2589, 2792
BseMI	GCAATG	3 cut(s)	1014, 2060, 2664
BseNI	ACTGG	7 cut(s)	506, 1334, 1499, 1523, 1585, 1742, 2565
BseRI	GAGGAG	2 cut(s)	267, 2185
BseSI	GKGCMC	2 cut(s)	44, 2140
BseXI	GCAGC	8 cut(s)	617, 935, 1453, 1810, 2123, 2168, 2284, 2287
BseYI	CCCAGC	1 cut(s)	1393
BsgI	GTGCAG	2 cut(s)	1673, 2718
Bsh1236I	CGCG	1 cut(s)	1758
Bsh1285I	CGRYCG	1 cut(s)	667
BshFI	GGCC	5 cut(s)	1367, 1621, 1791, 2013, 2610
BshNI	GGYRCC	3 cut(s)	1377, 2749, 2782
BsiEI	CGRYCG	1 cut(s)	667
BsiHKAI	GWGCWC	2 cut(s)	44, 2140
BsiHKCI	CYCGRG	1 cut(s)	1595
BsiSI	CCGG	5 cut(s)	1243, 2172, 2706, 2747, 2753
BslFI	GGGAC	4 cut(s)	950, 987, 1323, 2578
BslI	CCNNNNNNNGG	7 cut(s)	1141, 1374, 1628, 1979, 2216, 2589, 2792
BsmAI	GTCTC	5 cut(s)	1062, 1261, 1772, 1977, 2696
BsmFI	GGGAC	4 cut(s)	950, 987, 1323, 2578
BsmI	GAATGC	2 cut(s)	487, 1169
BsnI	GGCC	5 cut(s)	1367, 1621, 1791, 2013, 2610
Bso31I	GGTCTC	3 cut(s)	1261, 1977, 2696
BsoBI	CYCGRG	1 cut(s)	1595
Bsp1286I	GDGCHC	2 cut(s)	44, 2140
Bsp13I	TCCGGA	1 cut(s)	1242
Bsp143I	GATC	6 cut(s)	664, 1084, 1260, 1324, 1489, 1631
BspACI	CCGC	6 cut(s)	418, 1082, 1756, 1833, 2186, 2756
BspANI	GGCC	5 cut(s)	1367, 1621, 1791, 2013, 2610
BspEI	TCCGGA	1 cut(s)	1242
BspFNI	CGCG	1 cut(s)	1758
BspHI	TCATGA	3 cut(s)	1060, 1263, 2497
BspLI	GGNNCC	9 cut(s)	834, 938, 1311, 1379, 2012, 2593, 2594, 2751, 2784
BspMAI	CTGCAG	1 cut(s)	2113
BspMI	ACCTGC	3 cut(s)	1054, 1354, 2116
BspPI	GGATC	3 cut(s)	1092, 1484, 1639
BspT107I	GGYRCC	3 cut(s)	1377, 2749, 2782
BspTI	CTTAAG	1 cut(s)	977
BspTNI	GGTCTC	3 cut(s)	1261, 1977, 2696
BsrDI	GCAATG	3 cut(s)	1014, 2060, 2664
BsrFI	RCCGGY	2 cut(s)	2171, 2752
BsrI	ACTGG	7 cut(s)	506, 1334, 1499, 1523, 1585, 1742, 2565
BssAI	RCCGGY	2 cut(s)	2171, 2752
BssECI	CCNNGG	4 cut(s)	930, 1174, 1698, 2583
BssMI	GATC	6 cut(s)	664, 1084, 1260, 1324, 1489, 1631
BssSI	CACGAG	2 cut(s)	1197, 2386
Bst2BI	CACGAG	2 cut(s)	1197, 2386
Bst2UI	CCWGG	6 cut(s)	1176, 1424, 1788, 1793, 1941, 2585
Bst4CI	ACNGT	8 cut(s)	46, 398, 613, 1748, 2256, 2378, 2399, 2425
Bst6I	CTCTTC	4 cut(s)	276, 285, 1853, 2203
BstAFI	CTTAAG	1 cut(s)	977
BstBAI	YACGTR	2 cut(s)	659, 2328
BstC8I	GCNNGC	4 cut(s)	1005, 1851, 2211, 2754
BstDSI	CCRYGG	1 cut(s)	1698
BstENI	CCTNNNNNAGG	1 cut(s)	1977
BstF5I	GGATG	6 cut(s)	11, 364, 553, 679, 739, 2437
BstFNI	CGCG	1 cut(s)	1758
BstH2I	RGCGCY	2 cut(s)	764, 2472
BstHHI	GCGC	5 cut(s)	130, 411, 763, 987, 2471
BstKTI	GATC	6 cut(s)	667, 1087, 1263, 1327, 1492, 1634
BstMAI	GTCTC	5 cut(s)	1062, 1261, 1772, 1977, 2696
BstMBI	GATC	6 cut(s)	664, 1084, 1260, 1324, 1489, 1631
BstMCI	CGRYCG	1 cut(s)	667
BstMWI	GCNNNNNNNGC	4 cut(s)	383, 415, 2162, 2780
BstNI	CCWGG	6 cut(s)	1176, 1424, 1788, 1793, 1941, 2585
BstNSI	RCATGY	2 cut(s)	1853, 2083
BstSCI	CCNGG	6 cut(s)	1174, 1422, 1786, 1791, 1939, 2583
BstSFI	CTRYAG	2 cut(s)	1161, 2109
BstSLI	GKGCMC	2 cut(s)	44, 2140
BstSNI	TACGTA	1 cut(s)	2328
BstUI	CGCG	1 cut(s)	1758
BstV1I	GCAGC	8 cut(s)	617, 935, 1453, 1810, 2123, 2168, 2284, 2287
BstV2I	GAAGAC	1 cut(s)	2342
BstXI	CCANNNNNNTGG	3 cut(s)	613, 1682, 2366
Bsu36I	CCTNAGG	1 cut(s)	231
BsuRI	GGCC	5 cut(s)	1367, 1621, 1791, 2013, 2610
BtgI	CCRYGG	1 cut(s)	1698
BtsCI	GGATG	6 cut(s)	11, 364, 553, 679, 739, 2437
BtsI	GCAGTG	2 cut(s)	1461, 2398
BtsIMutI	CAGTG	5 cut(s)	618, 1327, 1461, 1578, 2398
BveI	ACCTGC	3 cut(s)	1054, 1354, 2116
Cac8I	GCNNGC	4 cut(s)	1005, 1851, 2211, 2754
CaiI	CAGNNNCTG	2 cut(s)	205, 1775
CciI	TCATGA	3 cut(s)	1060, 1263, 2497
CfoI	GCGC	5 cut(s)	130, 411, 763, 987, 2471
Cfr10I	RCCGGY	2 cut(s)	2171, 2752
Cfr13I	GGNCC	6 cut(s)	937, 1310, 1657, 2011, 2356, 2592
CseI	GACGC	1 cut(s)	36
Csp6I	GTAC	3 cut(s)	224, 526, 1038
CspCI	CAANNNNNGTGG	2 cut(s)	2708, 2743
CviQI	GTAC	3 cut(s)	224, 526, 1038
DpnI	GATC	6 cut(s)	666, 1086, 1262, 1326, 1491, 1633
DpnII	GATC	6 cut(s)	664, 1084, 1260, 1324, 1489, 1631
DraI	TTTAAA	2 cut(s)	895, 1752
DraIII	CACNNNGTG	1 cut(s)	2789
EaeI	YGGCCR	3 cut(s)	1619, 1789, 2608
Eam1104I	CTCTTC	4 cut(s)	276, 285, 1853, 2203
EarI	CTCTTC	4 cut(s)	276, 285, 1853, 2203
EciI	GGCGGA	2 cut(s)	1097, 2771
Eco105I	TACGTA	1 cut(s)	2328
Eco31I	GGTCTC	3 cut(s)	1261, 1977, 2696
Eco47I	GGWCC	5 cut(s)	937, 1310, 1657, 2356, 2592
Eco47III	AGCGCT	1 cut(s)	762
Eco57I	CTGAAG	1 cut(s)	2009
Eco72I	CACGTG	1 cut(s)	659
Eco81I	CCTNAGG	1 cut(s)	231
Eco88I	CYCGRG	1 cut(s)	1595
EcoNI	CCTNNNNNAGG	1 cut(s)	1977
EcoO109I	RGGNCCY	1 cut(s)	2592
EcoRI	GAATTC	1 cut(s)	2493
EcoRII	CCWGG	6 cut(s)	1174, 1422, 1786, 1791, 1939, 2583
EcoT22I	ATGCAT	2 cut(s)	1171, 1855
FalI	AAGNNNNNCTT	2 cut(s)	902, 934
FaqI	GGGAC	4 cut(s)	950, 987, 1323, 2578
FauI	CCCGC	1 cut(s)	411
FauNDI	CATATG	1 cut(s)	242
FbaI	TGATCA	1 cut(s)	1324
FblI	GTMKAC	2 cut(s)	209, 1575
Fnu4HI	GCNGC	8 cut(s)	631, 924, 1467, 1799, 2112, 2157, 2298, 2301
FokI	GGATG	6 cut(s)	18, 371, 560, 686, 746, 2444
Fsp4HI	GCNGC	8 cut(s)	631, 924, 1467, 1799, 2112, 2157, 2298, 2301
FspAI	RTGCGCAY	1 cut(s)	129
FspBI	CTAG	3 cut(s)	65, 1385, 2787
FspI	TGCGCA	2 cut(s)	129, 410
GlaI	GCGC	5 cut(s)	129, 410, 762, 986, 2470
GluI	GCNGC	8 cut(s)	631, 924, 1467, 1799, 2112, 2157, 2298, 2301
GsaI	CCCAGC	1 cut(s)	1397
GsuI	CTGGAG	2 cut(s)	1491, 1923
HaeII	RGCGCY	2 cut(s)	764, 2472
HaeIII	GGCC	5 cut(s)	1367, 1621, 1791, 2013, 2610
HapII	CCGG	5 cut(s)	1243, 2172, 2706, 2747, 2753
HgaI	GACGC	1 cut(s)	36
HhaI	GCGC	5 cut(s)	130, 411, 763, 987, 2471
Hin6I	GCGC	5 cut(s)	128, 409, 761, 985, 2469
HinP1I	GCGC	5 cut(s)	128, 409, 761, 985, 2469
HincII	GTYRAC	3 cut(s)	499, 702, 781
HindII	GTYRAC	3 cut(s)	499, 702, 781
HindIII	AAGCTT	1 cut(s)	1994
HpaII	CCGG	5 cut(s)	1243, 2172, 2706, 2747, 2753
HphI	GGTGA	3 cut(s)	199, 1190, 2250
Hpy166II	GTNNAC	9 cut(s)	42, 210, 394, 499, 702, 781, 1576, 2138, 2719
Hpy188I	TCNGA	9 cut(s)	57, 724, 1034, 1217, 1735, 1771, 1931, 2734, 2805
Hpy8I	GTNNAC	9 cut(s)	42, 210, 394, 499, 702, 781, 1576, 2138, 2719
Hpy99I	CGWCG	1 cut(s)	2097
HpyAV	CCTTC	6 cut(s)	170, 257, 1099, 1132, 1907, 2565
HpyCH4III	ACNGT	8 cut(s)	46, 398, 613, 1748, 2256, 2378, 2399, 2425
HpyCH4IV	ACGT	7 cut(s)	148, 658, 690, 2088, 2146, 2327, 2675
HpyF10VI	GCNNNNNNNGC	4 cut(s)	383, 415, 2162, 2780
HpySE526I	ACGT	7 cut(s)	148, 658, 690, 2088, 2146, 2327, 2675
HspAI	GCGC	5 cut(s)	128, 409, 761, 985, 2469
KflI	GGGWCCC	1 cut(s)	2592
Kpn2I	TCCGGA	1 cut(s)	1242
KroI	GCCGGC	1 cut(s)	2752
KroNI	GCCGGC	1 cut(s)	2754
Ksp22I	TGATCA	1 cut(s)	1324
Kzo9I	GATC	6 cut(s)	664, 1084, 1260, 1324, 1489, 1631
LmnI	GCTCC	1 cut(s)	1795
Lsp1109I	GCAGC	8 cut(s)	617, 935, 1453, 1810, 2123, 2168, 2284, 2287
LweI	GCATC	7 cut(s)	386, 459, 1113, 1156, 1862, 2158, 2491
MaeI	CTAG	3 cut(s)	65, 1385, 2787
MaeII	ACGT	7 cut(s)	148, 658, 690, 2088, 2146, 2327, 2675
MalI	GATC	6 cut(s)	666, 1086, 1262, 1326, 1491, 1633
MboI	GATC	6 cut(s)	664, 1084, 1260, 1324, 1489, 1631
MfeI	CAATTG	1 cut(s)	492
MhlI	GDGCHC	2 cut(s)	44, 2140
MlsI	TGGCCA	3 cut(s)	1621, 1791, 2610
MluNI	TGGCCA	3 cut(s)	1621, 1791, 2610
MlyI	GAGTC	3 cut(s)	260, 1064, 1428
MmeI	TCCRAC	2 cut(s)	153, 1805
Mox20I	TGGCCA	3 cut(s)	1621, 1791, 2610
Mph1103I	ATGCAT	2 cut(s)	1171, 1855
MroI	TCCGGA	1 cut(s)	1242
MroNI	GCCGGC	1 cut(s)	2752
MroXI	GAANNNNTTC	1 cut(s)	1284
MscI	TGGCCA	3 cut(s)	1621, 1791, 2610
MslI	CAYNNNNRTG	3 cut(s)	35, 241, 1356
Msp20I	TGGCCA	3 cut(s)	1621, 1791, 2610
MspA1I	CMGCKG	1 cut(s)	1801
MspCI	CTTAAG	1 cut(s)	977
MspI	CCGG	5 cut(s)	1243, 2172, 2706, 2747, 2753
MspR9I	CCNGG	6 cut(s)	1176, 1424, 1788, 1793, 1941, 2585
MssI	GTTTAAAC	1 cut(s)	1752
MunI	CAATTG	1 cut(s)	492
Mva1269I	GAATGC	2 cut(s)	487, 1169
MvaI	CCWGG	6 cut(s)	1176, 1424, 1788, 1793, 1941, 2585
MvnI	CGCG	1 cut(s)	1758
MwoI	GCNNNNNNNGC	4 cut(s)	383, 415, 2162, 2780
NaeI	GCCGGC	1 cut(s)	2754
NdeI	CATATG	1 cut(s)	242
NdeII	GATC	6 cut(s)	664, 1084, 1260, 1324, 1489, 1631
NgoMIV	GCCGGC	1 cut(s)	2752
NlaIV	GGNNCC	9 cut(s)	834, 938, 1311, 1379, 2012, 2593, 2594, 2751, 2784
NmuCI	GTSAC	5 cut(s)	2256, 2372, 2393, 2417, 2642
NsbI	TGCGCA	2 cut(s)	129, 410
NsiI	ATGCAT	2 cut(s)	1171, 1855
NspI	RCATGY	2 cut(s)	1853, 2083
PaeI	GCATGC	1 cut(s)	1853
PaeR7I	CTCGAG	1 cut(s)	1595
PagI	TCATGA	3 cut(s)	1060, 1263, 2497
PaqCI	CACCTGC	2 cut(s)	1054, 1354
PcsI	WCGNNNNNNNCGW	1 cut(s)	664
PctI	GAATGC	2 cut(s)	487, 1169
PdiI	GCCGGC	1 cut(s)	2754
PdmI	GAANNNNTTC	1 cut(s)	1284
PfeI	GAWTC	8 cut(s)	563, 682, 1280, 1839, 1876, 1949, 2446, 2769
PflMI	CCANNNNNTGG	2 cut(s)	1628, 2216
PkrI	GCNGC	8 cut(s)	632, 925, 1468, 1800, 2113, 2158, 2299, 2302
Ple19I	CGATCG	1 cut(s)	667
PleI	GAGTC	3 cut(s)	260, 1063, 1427
PmaCI	CACGTG	1 cut(s)	659
PmeI	GTTTAAAC	1 cut(s)	1752
PmlI	CACGTG	1 cut(s)	659
PpsI	GAGTC	3 cut(s)	260, 1063, 1427
Ppu21I	YACGTR	2 cut(s)	659, 2328
PpuMI	RGGWCCY	1 cut(s)	2592
PshBI	ATTAAT	1 cut(s)	2808
Psp1406I	AACGTT	2 cut(s)	2088, 2675
Psp5II	RGGWCCY	1 cut(s)	2592
Psp6I	CCWGG	6 cut(s)	1174, 1422, 1786, 1791, 1939, 2583
PspCI	CACGTG	1 cut(s)	659
PspFI	CCCAGC	1 cut(s)	1393
PspGI	CCWGG	6 cut(s)	1174, 1422, 1786, 1791, 1939, 2583
PspN4I	GGNNCC	9 cut(s)	834, 938, 1311, 1379, 2012, 2593, 2594, 2751, 2784
PspPI	GGNCC	6 cut(s)	937, 1310, 1657, 2011, 2356, 2592
PspPPI	RGGWCCY	1 cut(s)	2592
PspXI	VCTCGAGB	1 cut(s)	1595
PstI	CTGCAG	1 cut(s)	2113
PstNI	CAGNNNCTG	2 cut(s)	205, 1775
PvuI	CGATCG	1 cut(s)	667
PvuII	CAGCTG	1 cut(s)	1801
RsaI	GTAC	3 cut(s)	225, 527, 1039
RsaNI	GTAC	3 cut(s)	224, 526, 1038
RseI	CAYNNNNRTG	3 cut(s)	35, 241, 1356
SatI	GCNGC	8 cut(s)	631, 924, 1467, 1799, 2112, 2157, 2298, 2301
Sau3AI	GATC	6 cut(s)	664, 1084, 1260, 1324, 1489, 1631
Sau96I	GGNCC	6 cut(s)	937, 1310, 1657, 2011, 2356, 2592
SchI	GAGTC	3 cut(s)	260, 1064, 1428
ScrFI	CCNGG	6 cut(s)	1176, 1424, 1788, 1793, 1941, 2585
SduI	GDGCHC	2 cut(s)	44, 2140
SfaNI	GCATC	7 cut(s)	386, 459, 1113, 1156, 1862, 2158, 2491
SfcI	CTRYAG	2 cut(s)	1161, 2109
Sfr274I	CTCGAG	1 cut(s)	1595
SinI	GGWCC	5 cut(s)	937, 1310, 1657, 2356, 2592
SlaI	CTCGAG	1 cut(s)	1595
SmiMI	CAYNNNNRTG	3 cut(s)	35, 241, 1356
SmlI	CTYRAG	3 cut(s)	251, 977, 1595
SmoI	CTYRAG	3 cut(s)	251, 977, 1595
SnaBI	TACGTA	1 cut(s)	2328
SphI	GCATGC	1 cut(s)	1853
SsiI	CCGC	6 cut(s)	418, 1082, 1756, 1833, 2186, 2756
SspI	AATATT	1 cut(s)	2743
SspMI	CTAG	3 cut(s)	65, 1385, 2787
StyD4I	CCNGG	6 cut(s)	1174, 1422, 1786, 1791, 1939, 2583
TaaI	ACNGT	8 cut(s)	46, 398, 613, 1748, 2256, 2378, 2399, 2425
TaiI	ACGT	7 cut(s)	151, 661, 693, 2091, 2149, 2330, 2678
TaqI	TCGA	4 cut(s)	667, 1596, 1856, 1954
TatI	WGTACW	3 cut(s)	223, 525, 1037
TfiI	GAWTC	8 cut(s)	563, 682, 1280, 1839, 1876, 1949, 2446, 2769
TscAI	CASTG	5 cut(s)	618, 1334, 1468, 1585, 2398
TseFI	GTSAC	5 cut(s)	2256, 2372, 2393, 2417, 2642
TseI	GCWGC	8 cut(s)	630, 923, 1466, 1798, 2111, 2156, 2297, 2300
Tsp45I	GTSAC	5 cut(s)	2256, 2372, 2393, 2417, 2642
TspGWI	ACGGA	1 cut(s)	1273
TspRI	CASTG	5 cut(s)	618, 1334, 1468, 1585, 2398
Van91I	CCANNNNNTGG	2 cut(s)	1628, 2216
Vha464I	CTTAAG	1 cut(s)	977
VneI	GTGCAC	2 cut(s)	40, 2136
VpaK11BI	GGWCC	5 cut(s)	937, 1310, 1657, 2356, 2592
VspI	ATTAAT	1 cut(s)	2808
XagI	CCTNNNNNAGG	1 cut(s)	1977
XapI	RAATTY	6 cut(s)	770, 1625, 1865, 2240, 2493, 2552
XceI	RCATGY	2 cut(s)	1853, 2083
XhoI	CTCGAG	1 cut(s)	1595
XmiI	GTMKAC	2 cut(s)	209, 1575
XmnI	GAANNNNTTC	1 cut(s)	1284
XspI	CTAG	3 cut(s)	65, 1385, 2787
Zsp2I	ATGCAT	2 cut(s)	1171, 1855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.