Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0002777

Physical Location & Seq

Genomic Coordinates Reverse (-)

63896455 .. 63905197

Gene Structure 8743 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG467000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGGATGGGGAAACATTTACAGAAGGCGTATGAAAGTATGCACAGTGGCCTTTCTTATATACCTCGATTACAAGGCTTTGCAGCAAAGAGACAAATGGATTAGCAAACGCTGCAAATCTAAAAGTGAGGCTTTATGGGAAAGTGCTCATGAGCGGAATGCTAAACGAGTTCTCAGGTTGATAGTAGAGTTGGAAGGTTTGTGGGTGAAACTTGGGCAGTATCTGTCTACACGGGCAGATGTTCTTCCTGAAGCATATACATCTCTTCTCAAGCAATTACAGGACTCTCTTCCCCCTCGTCCTTTGCAAGAGGTTTCTCGAACTATACAGAAAGAGTTGGGGAAATCAATGGATGAGTTGTTCTCAGATTTTGTCAAAGTCCCTTTGGCAACTGCATCAATAGCACAAGTCCATCACGCAACCCTGCTTGATGGGCAGGAAGTAGTTGTTAAAGTTCAGCATGAGGGCATTAAGACAATCATATTGGAGGACTTGAAAAACGCAAAGTCAATTGTTGACTGGATAGCATGGGCAGAGCCTCAGTATAATTTTAATCCTATGATAGATGAATGGTGCAAAGAATGTCCGAATGAACTCGACTTCAATCATGAAGCTGAGAATACTCGAACAGTGTCTAAAAATCTTGGCTGCAGAACCAAACATGATGATAACCCCAGTGCCAATAAAGTGGATGTTTTGATACCAGAAGTTATTCAGTCAACAGAAAAAGTCCTCATTTCGGAGTTTATGGATGGCATTCGTTTAAATGACATAGAATCATTTGAAGCATTTGGTGTCAACAAACAAAAGGTTGTTGAAGAAATCACACGTGCATATGCCCACCAAATATATGTTGATGGATTTTTCAATGGTGACCCTCATCCTGGAAATTTTCTTGTGAGCAAGGAACCTCCACATCATCCAATTTTGCTGGACTTTGGACTTACTAAGAAATTATCAAGCTCTGTAAAACAAGCATTAGCGAAGATGTTCTTGGCTTCTGCTGAGGGGGACCATGTTGCTCTATTGTCGGCTTTTGCAGAAATGGGACTTAAGTTGCGCCTAGATATACCAGAGCAGGCAATGGAGATAACAACTGTATTCTTCCGTAGTACAACACCACCAAATGAGTCTCTTGAAACGATGAAAGCTCTGGTGGATCAAAGAGAAAAAAACATGAAGGTCATACAGGACAAGATGCAACTTAACCGAAAAGAGGTTAAACGCTTTAATCCTGTTGATGCATTTCCTGGTGATATTGTGATTTTTGCGCGAGTCCTCAATCTTCTTAGAGGGCTTTCTTCCGTAATGAACGTCCGCATTGTATATCTAGATATCATGAGACCATTTGCTGAATCCGTTTTACAGGGAAGCATTAATAGGGGACCAATGGTAAATGATCAGTGGATCTATGACACACCTGCCCTCTCTGATGTGGAGGCGAAGCTGAGGCGACTCCTACTTGAGCTGGGGAATGATAATAAAATTCTTGGAGTTCAGGTATGTGCCTACAAAGATGGAGAGGTTATTATTGACACTGCAGCTGGAGTGCTAGGTAGATATGATCCTCGCCCAGTTCAGCCTGACAGCCTTTTTCCAGTTTTTTCTGTGACAAAGGGTATAACAGCTGGAATGTTACATTGGCTGGTTGACAACGGAAAATTGAAGCTTGAGGAAAGTGTTGCAAGTATATGGCCAGAATTTGGATCAAACAGAAAGGATCTCATAAAGGTCCATCATGTGCTTAACCATACATCTGGATTGCACAATGCCTTGGCAGATATTAATAAAGAAAACCCTTTACTTATGTCTGACTGGGAGGAGTGTTTAAATCGCATTTCCATGTCAGTACCTGAGACTGAACCTGGCCAGGAGCAGTTGTATCACTATCTATCTTTTGGGTGGATATGTGGTGGAATCATTGAGCATGCATCAGGGAAAAAATTTAAGGAGATTCTGGAAGAAGCATTCATACACCCCCTACAAATTGAAGGGGAGTTATATATTGGAATCCCTCCAGGCAAGTGTACTATGTTTTGCTTCATTGAATGGAAGGAATATGTATGCATGATCTGCTATCACACTTCTTTGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1 Beta-lactamase WaaY

Protein Analysis

698

Amino Acids

79.3

Weight (kDa)

5.91

Isoelectric Point (pI)

38.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	92 - 341	4.4e-66	ABC1 atypical kinase-like domain
Beta-lactamase	PF00144	484 - 662	4.7e-37	Beta-lactamase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24810 AT5G24810
fragaria_vesca	FvH4_2g36370 FvH4_2g36370 FvH4_2g36370 FvH4_2g36372
malus_domestica	MD08G1123100.v1.1 MD15G1100800.v1.1 MD15G1102100.v1.1
prunus_persica	Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1 Prupe.1G455100_v2.0.a1
pyrus_communis	pycom08g10200 pycom08g10210 pycom15g09330
rosa_chinensis	RchiOBHm_Chr6g0305511
rosa_laevigata	RLG00000010882 RLG00000010885
rosa_multiflora	Rmu_co8395109.1_g000001 Rmu_sc0001809.1_g000002 Rmu_sc0001809.1_g000004 Rmu_sc0029548.1_g000001
rosa_roxburghii	Rroxscaffold_7G00162720 Rroxscaffold_7G00162740
rosa_rugosa	Rorug06G0340800.1 Rorug06G0341000 Rorug06G0341100
rosa_samantha	Rh6AG453000 Rh6AG453200 Rh6BG448600 Rh6BG448800 Rh6CG466700 Rh6CG467000 Rh6DG453400 Rh6DG453600
rosa_wichuraiana	Rw6G039470 Rw6G039490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1429
Acc36I	ACCTGC	1 cut(s)	1429
AccB7I	CCANNNNNTGG	1 cut(s)	1703
AccBSI	CCGCTC	1 cut(s)	154
AccI	GTMKAC	1 cut(s)	227
AccII	CGCG	1 cut(s)	1273
AciI	CCGC	2 cut(s)	154, 1318
AclWI	GGATC	5 cut(s)	1167, 1415, 1559, 1714, 1728
AcoI	YGGCCR	2 cut(s)	1694, 1867
AcsI	RAATTY	4 cut(s)	889, 1485, 1700, 1943
AcuI	CTGAAG	1 cut(s)	270
AcvI	CACGTG	1 cut(s)	830
AfaI	GTAC	3 cut(s)	1114, 1851, 2029
AfiI	CCNNNNNNNGG	4 cut(s)	739, 884, 1216, 1703
AflII	CTTAAG	1 cut(s)	1052
AflIII	ACRYGT	1 cut(s)	827
AgsI	TTSAA	9 cut(s)	496, 604, 785, 818, 868, 1139, 1666, 1991, 2048
AjnI	CCWGG	5 cut(s)	883, 1249, 1864, 1869, 2017
AjuI	GAANNNNNNNTTGG	4 cut(s)	977, 1009, 1624, 1656
AloI	GAACNNNNNNTCC	2 cut(s)	344, 376
AluBI	AGCT	8 cut(s)	614, 963, 1151, 1447, 1468, 1544, 1628, 1669
AluI	AGCT	8 cut(s)	614, 963, 1151, 1447, 1468, 1544, 1628, 1669
Alw21I	GWGCWC	1 cut(s)	148
Alw26I	GTCTC	4 cut(s)	84, 1137, 1336, 1850
AlwI	GGATC	5 cut(s)	1167, 1415, 1559, 1714, 1728
AlwNI	CAGNNNCTG	2 cut(s)	223, 1853
AoxI	GGCC	3 cut(s)	48, 1694, 1867
ApeKI	GCWGC	4 cut(s)	82, 111, 648, 1541
ApoI	RAATTY	4 cut(s)	889, 1485, 1700, 1943
AseI	ATTAAT	2 cut(s)	1377, 1785
Asp700I	GAANNNNTTC	2 cut(s)	711, 989
AspLEI	GCGC	2 cut(s)	1062, 1273
AspS9I	GGNCC	3 cut(s)	1012, 1385, 1732
AsuHPI	GGTGA	3 cut(s)	217, 884, 1265
AvaII	GGWCC	3 cut(s)	1012, 1385, 1732
BalI	TGGCCA	2 cut(s)	1696, 1869
BarI	GAAGNNNNNNTAC	2 cut(s)	1956, 1988
BbrPI	CACGTG	1 cut(s)	830
Bbv12I	GWGCWC	1 cut(s)	148
BbvCI	CCTCAGC	2 cut(s)	1005, 1448
BbvI	GCAGC	4 cut(s)	94, 98, 635, 1553
BccI	CCATC	6 cut(s)	420, 425, 746, 851, 1511, 1743
BciT130I	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
BclI	TGATCA	1 cut(s)	1399
BcoDI	GTCTC	4 cut(s)	84, 1137, 1336, 1850
BfaI	CTAG	3 cut(s)	1064, 1331, 1553
BfmI	CTRYAG	2 cut(s)	649, 1539
BfrI	CTTAAG	1 cut(s)	1052
BfuAI	ACCTGC	1 cut(s)	1429
BisI	GCNGC	4 cut(s)	83, 112, 649, 1542
BlsI	GCNGC	4 cut(s)	84, 113, 650, 1543
Bme1390I	CCNGG	5 cut(s)	885, 1251, 1866, 1871, 2019
Bme18I	GGWCC	3 cut(s)	1012, 1385, 1732
BmgT120I	GGNCC	3 cut(s)	1012, 1385, 1732
BmiI	GGNNCC	3 cut(s)	909, 1013, 1386
BmrFI	CCNGG	5 cut(s)	885, 1251, 1866, 1871, 2019
BmrI	ACTGGG	3 cut(s)	669, 1568, 1825
BmsI	GCATC	4 cut(s)	404, 1188, 1231, 1940
BmuI	ACTGGG	3 cut(s)	669, 1568, 1825
BplI	GAGNNNNNCTC	2 cut(s)	347, 379
BpmI	CTGGAG	2 cut(s)	1566, 2001
Bpu10I	CCTNAGC	2 cut(s)	1005, 1448
BpuEI	CTTGAG	3 cut(s)	254, 1484, 1691
BsaAI	YACGTR	1 cut(s)	830
BsaI	GGTCTC	1 cut(s)	1336
BsaJI	CCNNGG	1 cut(s)	1773
BsaXI	ACNNNNNCTCC	4 cut(s)	1485, 1515, 1865, 1895
Bsc4I	CCNNNNNNNGG	4 cut(s)	739, 884, 1216, 1703
Bse1I	ACTGG	5 cut(s)	524, 675, 1574, 1598, 1820
Bse3DI	GCAATG	1 cut(s)	1089
BseBI	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
BseDI	CCNNGG	1 cut(s)	1773
BseGI	GGATG	6 cut(s)	11, 358, 697, 757, 880, 919
BseLI	CCNNNNNNNGG	4 cut(s)	739, 884, 1216, 1703
BseMI	GCAATG	1 cut(s)	1089
BseMII	CTCAG	7 cut(s)	187, 378, 554, 606, 996, 1439, 1845
BseNI	ACTGG	5 cut(s)	524, 675, 1574, 1598, 1820
BseRI	GAGGAG	1 cut(s)	1835
BseXI	GCAGC	4 cut(s)	94, 98, 635, 1553
BseYI	CCCAGC	1 cut(s)	1468
Bsh1236I	CGCG	1 cut(s)	1273
BshFI	GGCC	3 cut(s)	50, 1696, 1869
BsiHKAI	GWGCWC	1 cut(s)	148
BslFI	GGGAC	4 cut(s)	365, 1025, 1062, 1398
BslI	CCNNNNNNNGG	4 cut(s)	739, 884, 1216, 1703
BsmAI	GTCTC	4 cut(s)	84, 1137, 1336, 1850
BsmFI	GGGAC	4 cut(s)	365, 1025, 1062, 1398
BsmI	GAATGC	3 cut(s)	163, 756, 1967
BsnI	GGCC	3 cut(s)	50, 1696, 1869
Bso31I	GGTCTC	1 cut(s)	1336
Bsp1286I	GDGCHC	1 cut(s)	148
Bsp143I	GATC	7 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2070
BspACI	CCGC	2 cut(s)	154, 1318
BspANI	GGCC	3 cut(s)	50, 1696, 1869
BspCNI	CTCAG	7 cut(s)	186, 377, 553, 607, 997, 1440, 1846
BspFNI	CGCG	1 cut(s)	1273
BspHI	TCATGA	3 cut(s)	148, 607, 1338
BspLI	GGNNCC	3 cut(s)	909, 1013, 1386
BspMAI	CTGCAG	2 cut(s)	653, 1543
BspMI	ACCTGC	1 cut(s)	1429
BspPI	GGATC	5 cut(s)	1167, 1415, 1559, 1714, 1728
BspTI	CTTAAG	1 cut(s)	1052
BspTNI	GGTCTC	1 cut(s)	1336
BsrBI	CCGCTC	1 cut(s)	154
BsrDI	GCAATG	1 cut(s)	1089
BsrI	ACTGG	5 cut(s)	524, 675, 1574, 1598, 1820
BssECI	CCNNGG	1 cut(s)	1773
BssMI	GATC	7 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2070
BssT1I	CCWWGG	1 cut(s)	1773
Bst2UI	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
Bst4CI	ACNGT	3 cut(s)	46, 631, 1099
Bst6I	CTCTTC	2 cut(s)	270, 294
BstAFI	CTTAAG	1 cut(s)	1052
BstAPI	GCANNNNNTGC	2 cut(s)	111, 2073
BstBAI	YACGTR	1 cut(s)	830
BstC8I	GCNNGC	2 cut(s)	1080, 1929
BstDEI	CTNAG	9 cut(s)	173, 364, 540, 615, 948, 1005, 1289, 1448, 1854
BstEII	GGTNACC	1 cut(s)	872
BstF5I	GGATG	6 cut(s)	11, 358, 697, 757, 880, 919
BstFNI	CGCG	1 cut(s)	1273
BstHHI	GCGC	2 cut(s)	1062, 1273
BstKTI	GATC	7 cut(s)	1162, 1402, 1410, 1567, 1709, 1723, 2073
BstMAI	GTCTC	4 cut(s)	84, 1137, 1336, 1850
BstMBI	GATC	7 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2070
BstMWI	GCNNNNNNNGC	4 cut(s)	111, 401, 433, 2073
BstNI	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
BstNSI	RCATGY	1 cut(s)	1931
BstPI	GGTNACC	1 cut(s)	872
BstSCI	CCNGG	5 cut(s)	883, 1249, 1864, 1869, 2017
BstSFI	CTRYAG	2 cut(s)	649, 1539
BstUI	CGCG	1 cut(s)	1273
BstV1I	GCAGC	4 cut(s)	94, 98, 635, 1553
BstX2I	RGATCY	2 cut(s)	1407, 1720
BstXI	CCANNNNNNTGG	2 cut(s)	688, 1757
BstYI	RGATCY	2 cut(s)	1407, 1720
BsuRI	GGCC	3 cut(s)	50, 1696, 1869
BtsCI	GGATG	6 cut(s)	11, 358, 697, 757, 880, 919
BtsI	GCAGTG	1 cut(s)	1536
BtsIMutI	CAGTG	5 cut(s)	51, 636, 682, 1409, 1536
BveI	ACCTGC	1 cut(s)	1429
Cac8I	GCNNGC	2 cut(s)	1080, 1929
CaiI	CAGNNNCTG	2 cut(s)	223, 1853
CciI	TCATGA	3 cut(s)	148, 607, 1338
CfoI	GCGC	2 cut(s)	1062, 1273
Cfr13I	GGNCC	3 cut(s)	1012, 1385, 1732
Csp6I	GTAC	3 cut(s)	1113, 1850, 2028
CviQI	GTAC	3 cut(s)	1113, 1850, 2028
DdeI	CTNAG	9 cut(s)	173, 364, 540, 615, 948, 1005, 1289, 1448, 1854
DpnI	GATC	7 cut(s)	1161, 1401, 1409, 1566, 1708, 1722, 2072
DpnII	GATC	7 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2070
DraI	TTTAAA	2 cut(s)	765, 1830
EaeI	YGGCCR	2 cut(s)	1694, 1867
Eam1104I	CTCTTC	2 cut(s)	270, 294
EarI	CTCTTC	2 cut(s)	270, 294
Eco130I	CCWWGG	1 cut(s)	1773
Eco31I	GGTCTC	1 cut(s)	1336
Eco32I	GATATC	1 cut(s)	1336
Eco47I	GGWCC	3 cut(s)	1012, 1385, 1732
Eco57I	CTGAAG	1 cut(s)	270
Eco72I	CACGTG	1 cut(s)	830
Eco91I	GGTNACC	1 cut(s)	872
EcoO65I	GGTNACC	1 cut(s)	872
EcoRII	CCWGG	5 cut(s)	883, 1249, 1864, 1869, 2017
EcoRV	GATATC	1 cut(s)	1336
EcoT14I	CCWWGG	1 cut(s)	1773
EcoT22I	ATGCAT	3 cut(s)	1246, 1933, 2069
ErhI	CCWWGG	1 cut(s)	1773
FalI	AAGNNNNNCTT	4 cut(s)	115, 147, 977, 1009
FaqI	GGGAC	4 cut(s)	365, 1025, 1062, 1398
FauNDI	CATATG	1 cut(s)	835
FbaI	TGATCA	1 cut(s)	1399
FblI	GTMKAC	1 cut(s)	227
Fnu4HI	GCNGC	4 cut(s)	83, 112, 649, 1542
FokI	GGATG	6 cut(s)	18, 365, 704, 764, 867, 906
Fsp4HI	GCNGC	4 cut(s)	83, 112, 649, 1542
FspBI	CTAG	3 cut(s)	1064, 1331, 1553
GlaI	GCGC	2 cut(s)	1061, 1272
GluI	GCNGC	4 cut(s)	83, 112, 649, 1542
GsaI	CCCAGC	1 cut(s)	1472
GsuI	CTGGAG	2 cut(s)	1566, 2001
HaeIII	GGCC	3 cut(s)	50, 1696, 1869
HhaI	GCGC	2 cut(s)	1062, 1273
Hin6I	GCGC	2 cut(s)	1060, 1271
HinP1I	GCGC	2 cut(s)	1060, 1271
HincII	GTYRAC	4 cut(s)	517, 720, 799, 1651
HindII	GTYRAC	4 cut(s)	517, 720, 799, 1651
HindIII	AAGCTT	1 cut(s)	1667
HinfI	GANTC	9 cut(s)	284, 776, 1130, 1275, 1355, 1455, 1917, 1954, 2010
HphI	GGTGA	3 cut(s)	217, 884, 1265
Hpy166II	GTNNAC	6 cut(s)	228, 517, 720, 799, 1651, 2028
Hpy188I	TCNGA	5 cut(s)	367, 588, 742, 1432, 1813
Hpy188III	TCNNGA	9 cut(s)	149, 248, 318, 608, 1136, 1331, 1339, 1758, 1958
Hpy8I	GTNNAC	6 cut(s)	228, 517, 720, 799, 1651, 2028
HpyAV	CCTTC	5 cut(s)	18, 188, 1174, 1985, 2047
HpyCH4III	ACNGT	3 cut(s)	46, 631, 1099
HpyCH4IV	ACGT	2 cut(s)	829, 1314
HpyF10VI	GCNNNNNNNGC	4 cut(s)	111, 401, 433, 2073
HpyF3I	CTNAG	9 cut(s)	173, 364, 540, 615, 948, 1005, 1289, 1448, 1854
HpySE526I	ACGT	2 cut(s)	829, 1314
HspAI	GCGC	2 cut(s)	1060, 1271
Ksp22I	TGATCA	1 cut(s)	1399
Kzo9I	GATC	7 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2070
LmnI	GCTCC	1 cut(s)	1873
Lsp1109I	GCAGC	4 cut(s)	94, 98, 635, 1553
LweI	GCATC	4 cut(s)	404, 1188, 1231, 1940
MaeI	CTAG	3 cut(s)	1064, 1331, 1553
MaeII	ACGT	2 cut(s)	829, 1314
MaeIII	GTNAC	3 cut(s)	872, 1609, 1635
MalI	GATC	7 cut(s)	1161, 1401, 1409, 1566, 1708, 1722, 2072
MbiI	CCGCTC	1 cut(s)	154
MboI	GATC	7 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2070
MboII	GAAGA	9 cut(s)	236, 257, 281, 830, 997, 1096, 1277, 1293, 1973
MfeI	CAATTG	1 cut(s)	510
MflI	RGATCY	2 cut(s)	1407, 1720
MhlI	GDGCHC	1 cut(s)	148
MlsI	TGGCCA	2 cut(s)	1696, 1869
MluNI	TGGCCA	2 cut(s)	1696, 1869
MlyI	GAGTC	4 cut(s)	278, 1139, 1284, 1449
MmeI	TCCRAC	1 cut(s)	171
Mox20I	TGGCCA	2 cut(s)	1696, 1869
Mph1103I	ATGCAT	3 cut(s)	1246, 1933, 2069
MroXI	GAANNNNTTC	2 cut(s)	711, 989
MscI	TGGCCA	2 cut(s)	1696, 1869
MslI	CAYNNNNRTG	1 cut(s)	1841
Msp20I	TGGCCA	2 cut(s)	1696, 1869
MspA1I	CMGCKG	2 cut(s)	1544, 1628
MspCI	CTTAAG	1 cut(s)	1052
MspR9I	CCNGG	5 cut(s)	885, 1251, 1866, 1871, 2019
MunI	CAATTG	1 cut(s)	510
Mva1269I	GAATGC	3 cut(s)	163, 756, 1967
MvaI	CCWGG	5 cut(s)	885, 1251, 1866, 1871, 2019
MvnI	CGCG	1 cut(s)	1273
MwoI	GCNNNNNNNGC	4 cut(s)	111, 401, 433, 2073
NdeI	CATATG	1 cut(s)	835
NdeII	GATC	7 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2070
NlaIV	GGNNCC	3 cut(s)	909, 1013, 1386
NmuCI	GTSAC	2 cut(s)	872, 1609
NsiI	ATGCAT	3 cut(s)	1246, 1933, 2069
NspI	RCATGY	1 cut(s)	1931
PaeI	GCATGC	1 cut(s)	1931
PagI	TCATGA	3 cut(s)	148, 607, 1338
PaqCI	CACCTGC	1 cut(s)	1429
PctI	GAATGC	3 cut(s)	163, 756, 1967
PdmI	GAANNNNTTC	2 cut(s)	711, 989
PfeI	GAWTC	5 cut(s)	776, 1355, 1917, 1954, 2010
PflMI	CCANNNNNTGG	1 cut(s)	1703
PfoI	TCCNGGA	1 cut(s)	883
PkrI	GCNGC	4 cut(s)	84, 113, 650, 1543
PleI	GAGTC	4 cut(s)	278, 1138, 1283, 1449
PmaCI	CACGTG	1 cut(s)	830
PmlI	CACGTG	1 cut(s)	830
PpsI	GAGTC	4 cut(s)	278, 1138, 1283, 1449
Ppu21I	YACGTR	1 cut(s)	830
PshBI	ATTAAT	2 cut(s)	1377, 1785
Psp6I	CCWGG	5 cut(s)	883, 1249, 1864, 1869, 2017
PspCI	CACGTG	1 cut(s)	830
PspEI	GGTNACC	1 cut(s)	872
PspFI	CCCAGC	1 cut(s)	1468
PspGI	CCWGG	5 cut(s)	883, 1249, 1864, 1869, 2017
PspN4I	GGNNCC	3 cut(s)	909, 1013, 1386
PspPI	GGNCC	3 cut(s)	1012, 1385, 1732
PstI	CTGCAG	2 cut(s)	653, 1543
PstNI	CAGNNNCTG	2 cut(s)	223, 1853
PsuI	RGATCY	2 cut(s)	1407, 1720
PvuII	CAGCTG	2 cut(s)	1544, 1628
RsaI	GTAC	3 cut(s)	1114, 1851, 2029
RsaNI	GTAC	3 cut(s)	1113, 1850, 2028
RseI	CAYNNNNRTG	1 cut(s)	1841
SatI	GCNGC	4 cut(s)	83, 112, 649, 1542
Sau3AI	GATC	7 cut(s)	1159, 1399, 1407, 1564, 1706, 1720, 2070
Sau96I	GGNCC	3 cut(s)	1012, 1385, 1732
SchI	GAGTC	4 cut(s)	278, 1139, 1284, 1449
ScrFI	CCNGG	5 cut(s)	885, 1251, 1866, 1871, 2019
SduI	GDGCHC	1 cut(s)	148
SfaNI	GCATC	4 cut(s)	404, 1188, 1231, 1940
SfcI	CTRYAG	2 cut(s)	649, 1539
SinI	GGWCC	3 cut(s)	1012, 1385, 1732
SmiMI	CAYNNNNRTG	1 cut(s)	1841
SmlI	CTYRAG	4 cut(s)	269, 1052, 1463, 1670
SmoI	CTYRAG	4 cut(s)	269, 1052, 1463, 1670
SphI	GCATGC	1 cut(s)	1931
SsiI	CCGC	2 cut(s)	154, 1318
SspMI	CTAG	3 cut(s)	1064, 1331, 1553
StyD4I	CCNGG	5 cut(s)	883, 1249, 1864, 1869, 2017
StyI	CCWWGG	1 cut(s)	1773
TaaI	ACNGT	3 cut(s)	46, 631, 1099
TaiI	ACGT	2 cut(s)	832, 1317
TaqI	TCGA	4 cut(s)	66, 319, 597, 625
TatI	WGTACW	2 cut(s)	1112, 2027
TfiI	GAWTC	5 cut(s)	776, 1355, 1917, 1954, 2010
TscAI	CASTG	5 cut(s)	51, 636, 682, 1409, 1543
TseFI	GTSAC	2 cut(s)	872, 1609
TseI	GCWGC	4 cut(s)	82, 111, 648, 1541
Tsp45I	GTSAC	2 cut(s)	872, 1609
TspDTI	ATGAA	9 cut(s)	47, 582, 606, 624, 1160, 1193, 1325, 1960, 2032
TspGWI	ACGGA	4 cut(s)	1097, 1294, 1348, 1671
TspRI	CASTG	5 cut(s)	51, 636, 682, 1409, 1543
Van91I	CCANNNNNTGG	1 cut(s)	1703
Vha464I	CTTAAG	1 cut(s)	1052
VpaK11BI	GGWCC	3 cut(s)	1012, 1385, 1732
VspI	ATTAAT	2 cut(s)	1377, 1785
XapI	RAATTY	4 cut(s)	889, 1485, 1700, 1943
XbaI	TCTAGA	1 cut(s)	1330
XceI	RCATGY	1 cut(s)	1931
XmiI	GTMKAC	1 cut(s)	227
XmnI	GAANNNNTTC	2 cut(s)	711, 989
XspI	CTAG	3 cut(s)	1064, 1331, 1553
Zsp2I	ATGCAT	3 cut(s)	1246, 1933, 2069

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.