protein trichome birefringence-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G20680 AT5G20680 AT5G20680 AT5G20680 AT5G20680 AT5G20680 |
| fragaria_vesca | FvH4_1g08950 FvH4_1g08950 FvH4_1g08950 FvH4_1g08950 FvH4_1g08950 FvH4_1g08950 FvH4_1g08950 |
| malus_domestica | MD02G1094800.v1.1 MD02G1095000.v1.1 MD15G1219700.v1.1 |
| prunus_persica | Prupe.7G196200_v2.0.a1 |
| pyrus_communis | pycom15g19490 |
| rosa_chinensis | RchiOBHm_Chr2g0095401 RchiOBHm_Chr6g0266541 RchiOBHm_Chr7g0215131 |
| rosa_laevigata | RLG00000016562 RLG00000028143 RLG00000028147 |
| rosa_multiflora | Rmu_co8443815.1_g000001 Rmu_sc0002037.1_g000019 Rmu_sc0004484.1_g000007 Rmu_sc0040132.1_g000001 Rmu_ssc0000183.1_g000043 |
| rosa_roxburghii | Rroxscaffold_2G00146400 |
| rosa_rugosa | Rorug01G0247000 Rorug02G0050500 |
| rosa_samantha | Rh1BG229300 Rh1DG257200 Rh2AG098700 Rh2BG099900 Rh2CG101900 Rh2DG099500 Rh7AG287300 |
| rosa_wichuraiana | Rw2G007450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 227 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 85 |
| AccB1I | GGYRCC | 2 cut(s) | 331, 1266 |
| AccII | CGCG | 1 cut(s) | 115 |
| AciI | CCGC | 8 cut(s) | 55, 58, 156, 335, 617, 770, 1072, 1212 |
| AclWI | GGATC | 1 cut(s) | 152 |
| AcoI | YGGCCR | 1 cut(s) | 1205 |
| AcsI | RAATTY | 2 cut(s) | 893, 951 |
| AcvI | CACGTG | 1 cut(s) | 1061 |
| AfaI | GTAC | 1 cut(s) | 684 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1043 |
| AgsI | TTSAA | 5 cut(s) | 75, 899, 916, 957, 1170 |
| AjnI | CCWGG | 4 cut(s) | 487, 546, 1127, 1248 |
| Alw21I | GWGCWC | 2 cut(s) | 17, 484 |
| Alw26I | GTCTC | 1 cut(s) | 164 |
| Alw44I | GTGCAC | 1 cut(s) | 13 |
| AlwI | GGATC | 1 cut(s) | 152 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 494 |
| AoxI | GGCC | 4 cut(s) | 961, 1034, 1205, 1362 |
| ApaLI | GTGCAC | 1 cut(s) | 13 |
| ApeKI | GCWGC | 3 cut(s) | 868, 1153, 1408 |
| ApoI | RAATTY | 2 cut(s) | 893, 951 |
| AseI | ATTAAT | 1 cut(s) | 1392 |
| AspLEI | GCGC | 2 cut(s) | 115, 837 |
| AspS9I | GGNCC | 4 cut(s) | 757, 961, 1034, 1252 |
| AsuHPI | GGTGA | 4 cut(s) | 542, 1021, 1318, 1411 |
| AvaII | GGWCC | 2 cut(s) | 757, 1252 |
| BaeGI | GKGCMC | 2 cut(s) | 17, 1269 |
| BanI | GGYRCC | 2 cut(s) | 331, 1266 |
| BanII | GRGCYC | 2 cut(s) | 362, 484 |
| BbrPI | CACGTG | 1 cut(s) | 1061 |
| Bbv12I | GWGCWC | 2 cut(s) | 17, 484 |
| BbvCI | CCTCAGC | 1 cut(s) | 50 |
| BbvI | GCAGC | 2 cut(s) | 880, 1165 |
| BccI | CCATC | 4 cut(s) | 15, 288, 620, 1124 |
| BceAI | ACGGC | 1 cut(s) | 17 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1184, 1218 |
| BciT130I | CCWGG | 4 cut(s) | 489, 548, 1129, 1250 |
| BclI | TGATCA | 1 cut(s) | 993 |
| BcoDI | GTCTC | 1 cut(s) | 164 |
| BfaI | CTAG | 4 cut(s) | 299, 704, 938, 1077 |
| BfmI | CTRYAG | 1 cut(s) | 1151 |
| BisI | GCNGC | 7 cut(s) | 56, 59, 335, 770, 869, 1154, 1409 |
| BlsI | GCNGC | 7 cut(s) | 57, 60, 336, 771, 870, 1155, 1410 |
| Bme1390I | CCNGG | 4 cut(s) | 489, 548, 1129, 1250 |
| Bme18I | GGWCC | 2 cut(s) | 757, 1252 |
| BmgT120I | GGNCC | 4 cut(s) | 757, 961, 1034, 1252 |
| BmiI | GGNNCC | 5 cut(s) | 333, 1035, 1097, 1268, 1277 |
| BmrFI | CCNGG | 4 cut(s) | 489, 548, 1129, 1250 |
| BmsI | GCATC | 6 cut(s) | 548, 631, 912, 1153, 1299, 1321 |
| BpmI | CTGGAG | 1 cut(s) | 705 |
| Bpu10I | CCTNAGC | 1 cut(s) | 50 |
| BsaAI | YACGTR | 1 cut(s) | 1061 |
| BsaJI | CCNNGG | 1 cut(s) | 1279 |
| BsaWI | WCCGGW | 1 cut(s) | 822 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 112, 142 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1043 |
| Bse1I | ACTGG | 3 cut(s) | 722, 976, 1277 |
| Bse3DI | GCAATG | 1 cut(s) | 803 |
| BseBI | CCWGG | 4 cut(s) | 489, 548, 1129, 1250 |
| BseDI | CCNNGG | 1 cut(s) | 1279 |
| BseGI | GGATG | 4 cut(s) | 379, 831, 927, 1116 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1043 |
| BseMI | GCAATG | 1 cut(s) | 803 |
| BseMII | CTCAG | 2 cut(s) | 41, 375 |
| BseNI | ACTGG | 3 cut(s) | 722, 976, 1277 |
| BseRI | GAGGAG | 1 cut(s) | 98 |
| BseSI | GKGCMC | 2 cut(s) | 17, 1269 |
| BseXI | GCAGC | 2 cut(s) | 880, 1165 |
| BseYI | CCCAGC | 2 cut(s) | 178, 1174 |
| BsgI | GTGCAG | 1 cut(s) | 378 |
| Bsh1236I | CGCG | 1 cut(s) | 115 |
| BshFI | GGCC | 4 cut(s) | 963, 1036, 1207, 1364 |
| BshNI | GGYRCC | 2 cut(s) | 331, 1266 |
| BsiHKAI | GWGCWC | 2 cut(s) | 17, 484 |
| BsiSI | CCGG | 2 cut(s) | 823, 1037 |
| BslFI | GGGAC | 1 cut(s) | 721 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1043 |
| BsmAI | GTCTC | 1 cut(s) | 164 |
| BsmBI | CGTCTC | 1 cut(s) | 164 |
| BsmFI | GGGAC | 1 cut(s) | 721 |
| BsmI | GAATGC | 1 cut(s) | 1214 |
| BsnI | GGCC | 4 cut(s) | 963, 1036, 1207, 1364 |
| Bsp1286I | GDGCHC | 4 cut(s) | 17, 362, 484, 1269 |
| Bsp1407I | TGTACA | 1 cut(s) | 682 |
| Bsp143I | GATC | 4 cut(s) | 144, 993, 1147, 1201 |
| BspACI | CCGC | 8 cut(s) | 55, 58, 156, 335, 617, 770, 1072, 1212 |
| BspANI | GGCC | 4 cut(s) | 963, 1036, 1207, 1364 |
| BspCNI | CTCAG | 2 cut(s) | 42, 374 |
| BspFNI | CGCG | 1 cut(s) | 115 |
| BspLI | GGNNCC | 5 cut(s) | 333, 1035, 1097, 1268, 1277 |
| BspMAI | CTGCAG | 1 cut(s) | 1155 |
| BspPI | GGATC | 1 cut(s) | 152 |
| BspT107I | GGYRCC | 2 cut(s) | 331, 1266 |
| BsrDI | GCAATG | 1 cut(s) | 803 |
| BsrGI | TGTACA | 1 cut(s) | 682 |
| BsrI | ACTGG | 3 cut(s) | 722, 976, 1277 |
| BssECI | CCNNGG | 1 cut(s) | 1279 |
| BssMI | GATC | 4 cut(s) | 144, 993, 1147, 1201 |
| Bst2UI | CCWGG | 4 cut(s) | 489, 548, 1129, 1250 |
| Bst4CI | ACNGT | 8 cut(s) | 19, 43, 307, 457, 1280, 1301, 1378, 1385 |
| Bst6I | CTCTTC | 1 cut(s) | 513 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 641 |
| BstAUI | TGTACA | 1 cut(s) | 682 |
| BstBAI | YACGTR | 1 cut(s) | 1061 |
| BstDEI | CTNAG | 3 cut(s) | 50, 361, 906 |
| BstDSI | CCRYGG | 1 cut(s) | 1279 |
| BstF5I | GGATG | 4 cut(s) | 379, 831, 927, 1116 |
| BstFNI | CGCG | 1 cut(s) | 115 |
| BstHHI | GCGC | 2 cut(s) | 115, 837 |
| BstKTI | GATC | 4 cut(s) | 147, 996, 1150, 1204 |
| BstMAI | GTCTC | 1 cut(s) | 164 |
| BstMBI | GATC | 4 cut(s) | 144, 993, 1147, 1201 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 55, 641, 1071 |
| BstNI | CCWGG | 4 cut(s) | 489, 548, 1129, 1250 |
| BstSCI | CCNGG | 4 cut(s) | 487, 546, 1127, 1248 |
| BstSFI | CTRYAG | 1 cut(s) | 1151 |
| BstSLI | GKGCMC | 2 cut(s) | 17, 1269 |
| BstUI | CGCG | 1 cut(s) | 115 |
| BstV1I | GCAGC | 2 cut(s) | 880, 1165 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1061 |
| BsuRI | GGCC | 4 cut(s) | 963, 1036, 1207, 1364 |
| BtgI | CCRYGG | 1 cut(s) | 1279 |
| BtgZI | GCGATG | 1 cut(s) | 1080 |
| BtsCI | GGATG | 4 cut(s) | 379, 831, 927, 1116 |
| BtsI | GCAGTG | 2 cut(s) | 171, 669 |
| BtsIMutI | CAGTG | 5 cut(s) | 15, 171, 669, 1270, 1332 |
| CaiI | CAGNNNCTG | 1 cut(s) | 494 |
| CfoI | GCGC | 2 cut(s) | 115, 837 |
| Cfr13I | GGNCC | 4 cut(s) | 757, 961, 1034, 1252 |
| CsiI | ACCWGGT | 2 cut(s) | 487, 546 |
| Csp6I | GTAC | 1 cut(s) | 683 |
| CviAII | CATG | 5 cut(s) | 785, 864, 991, 1016, 1192 |
| CviQI | GTAC | 1 cut(s) | 683 |
| DdeI | CTNAG | 3 cut(s) | 50, 361, 906 |
| DpnI | GATC | 4 cut(s) | 146, 995, 1149, 1203 |
| DpnII | GATC | 4 cut(s) | 144, 993, 1147, 1201 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 85 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 85 |
| EaeI | YGGCCR | 1 cut(s) | 1205 |
| Eam1104I | CTCTTC | 1 cut(s) | 513 |
| EarI | CTCTTC | 1 cut(s) | 513 |
| EciI | GGCGGA | 1 cut(s) | 1061 |
| Ecl136II | GAGCTC | 1 cut(s) | 482 |
| Eco24I | GRGCYC | 2 cut(s) | 362, 484 |
| Eco47I | GGWCC | 2 cut(s) | 757, 1252 |
| Eco53kI | GAGCTC | 1 cut(s) | 482 |
| Eco72I | CACGTG | 1 cut(s) | 1061 |
| EcoICRI | GAGCTC | 1 cut(s) | 482 |
| EcoRII | CCWGG | 4 cut(s) | 487, 546, 1127, 1248 |
| EcoT22I | ATGCAT | 1 cut(s) | 1314 |
| EcoT38I | GRGCYC | 2 cut(s) | 362, 484 |
| Esp3I | CGTCTC | 1 cut(s) | 164 |
| FaeI | CATG | 5 cut(s) | 788, 867, 994, 1019, 1195 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 303, 335 |
| FaqI | GGGAC | 1 cut(s) | 721 |
| FatI | CATG | 5 cut(s) | 784, 863, 990, 1015, 1191 |
| FauI | CCCGC | 2 cut(s) | 149, 1219 |
| FbaI | TGATCA | 1 cut(s) | 993 |
| Fnu4HI | GCNGC | 7 cut(s) | 56, 59, 335, 770, 869, 1154, 1409 |
| FokI | GGATG | 4 cut(s) | 386, 838, 934, 1103 |
| FriOI | GRGCYC | 2 cut(s) | 362, 484 |
| Fsp4HI | GCNGC | 7 cut(s) | 56, 59, 335, 770, 869, 1154, 1409 |
| FspBI | CTAG | 4 cut(s) | 299, 704, 938, 1077 |
| GlaI | GCGC | 2 cut(s) | 114, 836 |
| GluI | GCNGC | 7 cut(s) | 56, 59, 335, 770, 869, 1154, 1409 |
| GsaI | CCCAGC | 2 cut(s) | 182, 1178 |
| GsuI | CTGGAG | 1 cut(s) | 705 |
| HaeIII | GGCC | 4 cut(s) | 963, 1036, 1207, 1364 |
| HapII | CCGG | 2 cut(s) | 823, 1037 |
| HhaI | GCGC | 2 cut(s) | 115, 837 |
| Hin1II | CATG | 5 cut(s) | 788, 867, 994, 1019, 1195 |
| Hin6I | GCGC | 2 cut(s) | 113, 835 |
| HinP1I | GCGC | 2 cut(s) | 113, 835 |
| HindIII | AAGCTT | 1 cut(s) | 1286 |
| HinfI | GANTC | 2 cut(s) | 86, 474 |
| HpaII | CCGG | 2 cut(s) | 823, 1037 |
| HphI | GGTGA | 4 cut(s) | 542, 1021, 1318, 1411 |
| Hpy166II | GTNNAC | 4 cut(s) | 15, 757, 1381, 1402 |
| Hpy188I | TCNGA | 8 cut(s) | 91, 364, 403, 479, 496, 508, 679, 1328 |
| Hpy188III | TCNNGA | 2 cut(s) | 611, 913 |
| Hpy8I | GTNNAC | 4 cut(s) | 15, 757, 1381, 1402 |
| Hpy99I | CGWCG | 1 cut(s) | 38 |
| HpyAV | CCTTC | 5 cut(s) | 103, 129, 850, 893, 1354 |
| HpyCH4III | ACNGT | 8 cut(s) | 19, 43, 307, 457, 1280, 1301, 1378, 1385 |
| HpyCH4IV | ACGT | 2 cut(s) | 696, 1060 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 55, 641, 1071 |
| HpyF3I | CTNAG | 3 cut(s) | 50, 361, 906 |
| HpySE526I | ACGT | 2 cut(s) | 696, 1060 |
| Hsp92II | CATG | 5 cut(s) | 788, 867, 994, 1019, 1195 |
| HspAI | GCGC | 2 cut(s) | 113, 835 |
| Ksp22I | TGATCA | 1 cut(s) | 993 |
| Kzo9I | GATC | 4 cut(s) | 144, 993, 1147, 1201 |
| LmnI | GCTCC | 5 cut(s) | 479, 487, 700, 724, 1416 |
| Lsp1109I | GCAGC | 2 cut(s) | 880, 1165 |
| LweI | GCATC | 6 cut(s) | 548, 631, 912, 1153, 1299, 1321 |
| MabI | ACCWGGT | 2 cut(s) | 487, 546 |
| MaeI | CTAG | 4 cut(s) | 299, 704, 938, 1077 |
| MaeII | ACGT | 2 cut(s) | 696, 1060 |
| MaeIII | GTNAC | 2 cut(s) | 37, 1372 |
| MalI | GATC | 4 cut(s) | 146, 995, 1149, 1203 |
| MboI | GATC | 4 cut(s) | 144, 993, 1147, 1201 |
| MboII | GAAGA | 8 cut(s) | 112, 115, 118, 476, 530, 605, 902, 1354 |
| MhlI | GDGCHC | 4 cut(s) | 17, 362, 484, 1269 |
| MluCI | AATT | 8 cut(s) | 197, 228, 467, 673, 730, 893, 951, 1393 |
| MlyI | GAGTC | 2 cut(s) | 95, 468 |
| MmeI | TCCRAC | 2 cut(s) | 69, 928 |
| MnlI | CCTC | 7 cut(s) | 45, 76, 114, 1005, 1130, 1151, 1265 |
| Mph1103I | ATGCAT | 1 cut(s) | 1314 |
| MseI | TTAA | 5 cut(s) | 569, 983, 1242, 1290, 1392 |
| MslI | CAYNNNNRTG | 2 cut(s) | 292, 1219 |
| MspA1I | CMGCKG | 1 cut(s) | 772 |
| MspI | CCGG | 2 cut(s) | 823, 1037 |
| MspR9I | CCNGG | 4 cut(s) | 489, 548, 1129, 1250 |
| Mva1269I | GAATGC | 1 cut(s) | 1214 |
| MvaI | CCWGG | 4 cut(s) | 489, 548, 1129, 1250 |
| MvnI | CGCG | 1 cut(s) | 115 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 55, 641, 1071 |
| NdeII | GATC | 4 cut(s) | 144, 993, 1147, 1201 |
| NlaIII | CATG | 5 cut(s) | 788, 867, 994, 1019, 1195 |
| NlaIV | GGNNCC | 5 cut(s) | 333, 1035, 1097, 1268, 1277 |
| NmuCI | GTSAC | 1 cut(s) | 1372 |
| NsiI | ATGCAT | 1 cut(s) | 1314 |
| PctI | GAATGC | 1 cut(s) | 1214 |
| PkrI | GCNGC | 7 cut(s) | 57, 60, 336, 771, 870, 1155, 1410 |
| PleI | GAGTC | 2 cut(s) | 94, 468 |
| PmaCI | CACGTG | 1 cut(s) | 1061 |
| PmlI | CACGTG | 1 cut(s) | 1061 |
| PpsI | GAGTC | 2 cut(s) | 94, 468 |
| Ppu21I | YACGTR | 1 cut(s) | 1061 |
| PshBI | ATTAAT | 1 cut(s) | 1392 |
| PsiI | TTATAA | 1 cut(s) | 227 |
| Psp124BI | GAGCTC | 1 cut(s) | 484 |
| Psp6I | CCWGG | 4 cut(s) | 487, 546, 1127, 1248 |
| PspCI | CACGTG | 1 cut(s) | 1061 |
| PspFI | CCCAGC | 2 cut(s) | 178, 1174 |
| PspGI | CCWGG | 4 cut(s) | 487, 546, 1127, 1248 |
| PspN4I | GGNNCC | 5 cut(s) | 333, 1035, 1097, 1268, 1277 |
| PspPI | GGNCC | 4 cut(s) | 757, 961, 1034, 1252 |
| PstI | CTGCAG | 1 cut(s) | 1155 |
| PstNI | CAGNNNCTG | 1 cut(s) | 494 |
| RsaI | GTAC | 1 cut(s) | 684 |
| RsaNI | GTAC | 1 cut(s) | 683 |
| RseI | CAYNNNNRTG | 2 cut(s) | 292, 1219 |
| SacI | GAGCTC | 1 cut(s) | 484 |
| SaqAI | TTAA | 5 cut(s) | 569, 983, 1242, 1290, 1392 |
| SatI | GCNGC | 7 cut(s) | 56, 59, 335, 770, 869, 1154, 1409 |
| Sau3AI | GATC | 4 cut(s) | 144, 993, 1147, 1201 |
| Sau96I | GGNCC | 4 cut(s) | 757, 961, 1034, 1252 |
| SchI | GAGTC | 2 cut(s) | 95, 468 |
| ScrFI | CCNGG | 4 cut(s) | 489, 548, 1129, 1250 |
| SduI | GDGCHC | 4 cut(s) | 17, 362, 484, 1269 |
| SexAI | ACCWGGT | 2 cut(s) | 487, 546 |
| SfaNI | GCATC | 6 cut(s) | 548, 631, 912, 1153, 1299, 1321 |
| SfcI | CTRYAG | 1 cut(s) | 1151 |
| SinI | GGWCC | 2 cut(s) | 757, 1252 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 292, 1219 |
| Sse9I | AATT | 8 cut(s) | 197, 228, 467, 673, 730, 893, 951, 1393 |
| SsiI | CCGC | 8 cut(s) | 55, 58, 156, 335, 617, 770, 1072, 1212 |
| SspMI | CTAG | 4 cut(s) | 299, 704, 938, 1077 |
| SstI | GAGCTC | 1 cut(s) | 484 |
| StyD4I | CCNGG | 4 cut(s) | 487, 546, 1127, 1248 |
| TaaI | ACNGT | 8 cut(s) | 19, 43, 307, 457, 1280, 1301, 1378, 1385 |
| TaiI | ACGT | 2 cut(s) | 699, 1063 |
| TaqI | TCGA | 3 cut(s) | 133, 147, 292 |
| TasI | AATT | 8 cut(s) | 197, 228, 467, 673, 730, 893, 951, 1393 |
| TatI | WGTACW | 1 cut(s) | 682 |
| TauI | GCSGC | 4 cut(s) | 58, 61, 337, 772 |
| Tru1I | TTAA | 5 cut(s) | 569, 983, 1242, 1290, 1392 |
| Tru9I | TTAA | 5 cut(s) | 569, 983, 1242, 1290, 1392 |
| TscAI | CASTG | 5 cut(s) | 22, 171, 669, 1277, 1339 |
| TseFI | GTSAC | 1 cut(s) | 1372 |
| TseI | GCWGC | 3 cut(s) | 868, 1153, 1408 |
| Tsp45I | GTSAC | 1 cut(s) | 1372 |
| TspDTI | ATGAA | 3 cut(s) | 201, 852, 1223 |
| TspRI | CASTG | 5 cut(s) | 22, 171, 669, 1277, 1339 |
| VneI | GTGCAC | 1 cut(s) | 13 |
| VpaK11BI | GGWCC | 2 cut(s) | 757, 1252 |
| VspI | ATTAAT | 1 cut(s) | 1392 |
| XapI | RAATTY | 2 cut(s) | 893, 951 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1277 |
| XspI | CTAG | 4 cut(s) | 299, 704, 938, 1077 |
| Zsp2I | ATGCAT | 1 cut(s) | 1314 |