Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0002590

Physical Location & Seq

Genomic Coordinates Forward (+)

7997550 .. 8001869

Gene Structure 4320 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG099500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGAAAGGAGGGTTTAATGGATTGAAGGGTAAGCAAATCTCCCTCATTTCTATAGTTCTCATGTCAACAACTATTCTTATGTGGGCATGGGAGAAAACCCCACTTCTTACTACCTTGGTTCCGGCCGAAACCGAAACCCGGTTGCAGGTGTCTCCAGAACTGAGGGATGTTGTTGTAGACAGGGCTGTACCATCGCAACAAGAGCTAGACGTAGGCAAGGGTGTGACGGCATTAGCAGAGAAGGATGCCCGGAAAGAAGAATTTCGTGCTGGGTTAGGAACTACGCTAGATTCCGGACAAGAAGAGTCTCGTAAAAGCGATGGGATTGATAGTGATCAAGTGACAGACCATGTTGAGAGTAATGGGATTTCCTCAAGTGAATCAAAAGAAGCTGGTAATGTAGTTGGAGAAGAAGCTTCAAACCCAGAAGAGAGGACGTCAGTTGATAGAAGACACGGAGAAAAAGCAGAAGAAAAGAATTCAGTCCTACAAAAACCAATAGATCCTGCTTATACAAATATCTCTGTTGGGGGAAATCTCGAGGACAAATTAACTACTCATATGGAAAGTCCAGGCTGCAATTATGCAAAAGGAAAATGGGTTGTAGGTGATAAGCAGCCATTGTATTCTGGGTTTAGTTGTAAACAATGGTTGTCAGGGCCGTGGGCTTGCCGGTTGACACAGCGCACAGATTTTGCCTATGAGATGCTTCGATGGCAGCCAAGGGATTGTCAAATGGAAGAATTTGAAGGCTCCAAGTTTTTGAAAAGGATGCAAGACAAAACTCTAGCTTTTGTTGGAGATTCATTGGGTCGACAGCAGTTCCAATCTTTAATGTGCATGGTTACAGGTGGTAATGAGAGAAAAGATGTGATAGATGTGGGGATGGAGTATGGGATAGCCCAAGCACGTGGCGATGTCCGCCCTAGTGGGTGGGCTTATCGGTTCCCAAGCACTAACACTACCATCCTCTATTACTGGTCAGCAAGCCTCTGCGATGTGCAGCCTATTAATCCAACAGACCCAGCCACTGATTATGCCATGCACCTTGATCGACCACCAGCATTCTTGGTCCAATATCTTCACAAATTGGATGTCGTGGTCCTCAATACAGGGCACCATTGGAATCGTGGGAAGCTCAAAGCTAACCGCTGGGTAATGTATGTTGGAGGAAAGCCAAACAAGGACAAGAAAATAGCGATGATTTGGAAGGCCAAGAATGTGACTGTCTACAGTGTTGTTAATTGGGTCAATTCACAGCTCCCAAAATATCCAGGTCTCAAAGTATTCTACCGATCCATCTCGCCAAGGCATTTTGTTGGTGGGGACTGGAATACAGGAGGAAGCTGTGACAACACGAAACCCATGTCAGTAGGAAAGGAAGTATTGCAAGATGAGTCTAGTGATGAATCGGCTGCCGGCGCAGTGAAGGGAACAGGGGTTAAGATCTTGGACATAACAGCTCTATCTCAGCTTAGGGATGAGGGTCATATATCCCGGTTCAGAATCCAAGCCAAATCAGGCATGCAAGATTGTCTGCATTGGTGCTTACCTGGCGTTCCTGATACATGGAATGAAATTCTGTTCAACCAAATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008374 GO:0009987 GO:0012505 GO:0016407 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0071554 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PC-Esterase PMR5N

Protein Analysis

532

Amino Acids

59.34

Weight (kDa)

6.41

Isoelectric Point (pI)

42.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMR5N	PF14416	192 - 245	8.9e-14	PMR5 N terminal Domain
PC-Esterase	PF13839	248 - 530	5e-73	GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002590)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20680 AT5G20680 AT5G20680 AT5G20680 AT5G20680 AT5G20680
fragaria_vesca	FvH4_1g08950 FvH4_1g08950 FvH4_1g08950 FvH4_1g08950 FvH4_1g08950 FvH4_1g08950 FvH4_1g08950
malus_domestica	MD02G1094800.v1.1 MD02G1095000.v1.1 MD15G1219700.v1.1
prunus_persica	Prupe.7G196200_v2.0.a1
pyrus_communis	pycom15g19490
rosa_chinensis	RchiOBHm_Chr2g0095401 RchiOBHm_Chr6g0266541 RchiOBHm_Chr7g0215131
rosa_laevigata	RLG00000016562 RLG00000028143 RLG00000028147
rosa_multiflora	Rmu_co8443815.1_g000001 Rmu_sc0002037.1_g000019 Rmu_sc0004484.1_g000007 Rmu_sc0040132.1_g000001 Rmu_ssc0000183.1_g000043
rosa_roxburghii	Rroxscaffold_2G00146400
rosa_rugosa	Rorug01G0247000 Rorug02G0050500
rosa_samantha	Rh1BG229300 Rh1DG257200 Rh2AG098700 Rh2BG099900 Rh2CG101900 Rh2DG099500 Rh7AG287300
rosa_wichuraiana	Rw2G007450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	136
AatII	GACGTC	1 cut(s)	440
Acc36I	ACCTGC	1 cut(s)	136
AccB1I	GGYRCC	1 cut(s)	1116
AccI	GTMKAC	3 cut(s)	177, 814, 1230
AccIII	TCCGGA	1 cut(s)	293
AciI	CCGC	2 cut(s)	922, 1150
AclWI	GGATC	2 cut(s)	497, 1290
AcoI	YGGCCR	1 cut(s)	123
AcsI	RAATTY	4 cut(s)	260, 478, 743, 1578
AcvI	CACGTG	1 cut(s)	911
AcyI	GRCGYC	1 cut(s)	437
AfaI	GTAC	1 cut(s)	189
AfiI	CCNNNNNNNGG	2 cut(s)	138, 145
AgsI	TTSAA	5 cut(s)	25, 420, 749, 766, 1588
AjnI	CCWGG	3 cut(s)	571, 1273, 1552
Alw26I	GTCTC	3 cut(s)	156, 312, 1283
AlwI	GGATC	2 cut(s)	497, 1290
AlwNI	CAGNNNCTG	1 cut(s)	1031
Ama87I	CYCGRG	1 cut(s)	539
Aor13HI	TCCGGA	1 cut(s)	293
AoxI	GGCC	3 cut(s)	123, 659, 1212
ApeKI	GCWGC	5 cut(s)	576, 616, 718, 1003, 1415
ApoI	RAATTY	4 cut(s)	260, 478, 743, 1578
ArsI	GACNNNNNNTTYG	4 cut(s)	1080, 1112, 1352, 1384
AseI	ATTAAT	1 cut(s)	1011
Asp700I	GAANNNNTTC	1 cut(s)	261
AspLEI	GCGC	2 cut(s)	687, 1424
AspS9I	GGNCC	3 cut(s)	659, 1072, 1102
AsuC2I	CCSGG	3 cut(s)	139, 250, 1498
AsuHPI	GGTGA	1 cut(s)	620
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	2 cut(s)	1072, 1102
BaeGI	GKGCMC	1 cut(s)	1119
BanI	GGYRCC	1 cut(s)	1116
BbrPI	CACGTG	1 cut(s)	911
BbsI	GAAGAC	1 cut(s)	457
BbvI	GCAGC	5 cut(s)	563, 628, 730, 1015, 1402
BccI	CCATC	6 cut(s)	199, 314, 708, 880, 974, 1307
BceAI	ACGGC	2 cut(s)	243, 646
BcgI	CGANNNNNNTGC	2 cut(s)	1034, 1068
BciT130I	CCWGG	3 cut(s)	573, 1275, 1554
BclI	TGATCA	1 cut(s)	334
BcnI	CCSGG	3 cut(s)	139, 250, 1498
BcoDI	GTCTC	3 cut(s)	156, 312, 1283
BfaI	CTAG	6 cut(s)	206, 287, 788, 927, 1401, 1597
BfmI	CTRYAG	2 cut(s)	51, 1231
BfuAI	ACCTGC	1 cut(s)	136
BglII	AGATCT	1 cut(s)	1446
BisI	GCNGC	5 cut(s)	577, 617, 719, 1004, 1416
BlsI	GCNGC	5 cut(s)	578, 618, 720, 1005, 1417
Bme1390I	CCNGG	6 cut(s)	139, 250, 573, 1275, 1498, 1554
Bme18I	GGWCC	2 cut(s)	1072, 1102
BmeT110I	CYCGRG	1 cut(s)	539
BmgT120I	GGNCC	3 cut(s)	659, 1072, 1102
BmiI	GGNNCC	4 cut(s)	120, 754, 947, 1118
BmrFI	CCNGG	6 cut(s)	139, 250, 573, 1275, 1498, 1554
BmsI	GCATC	3 cut(s)	235, 696, 762
BpiI	GAAGAC	1 cut(s)	457
BpmI	CTGGAG	1 cut(s)	138
Bpu10I	CCTNAGC	1 cut(s)	1475
BpuEI	CTTGAG	1 cut(s)	358
BpuMI	CCSGG	3 cut(s)	139, 250, 1498
BsaAI	YACGTR	1 cut(s)	911
BsaBI	GATNNNNATC	1 cut(s)	333
BsaHI	GRCGYC	1 cut(s)	437
BsaI	GGTCTC	1 cut(s)	1283
BsaJI	CCNNGG	4 cut(s)	114, 662, 722, 1307
BsaWI	WCCGGW	1 cut(s)	293
Bsc4I	CCNNNNNNNGG	2 cut(s)	138, 145
Bse118I	RCCGGY	2 cut(s)	672, 1418
Bse1I	ACTGG	2 cut(s)	983, 1334
Bse8I	GATNNNNATC	1 cut(s)	333
BseAI	TCCGGA	1 cut(s)	293
BseBI	CCWGG	3 cut(s)	573, 1275, 1554
BseDI	CCNNGG	4 cut(s)	114, 662, 722, 1307
BseGI	GGATG	7 cut(s)	172, 250, 777, 891, 966, 1099, 1486
BseJI	GATNNNNATC	1 cut(s)	333
BseLI	CCNNNNNNNGG	2 cut(s)	138, 145
BseMII	CTCAG	2 cut(s)	152, 1484
BseNI	ACTGG	2 cut(s)	983, 1334
BseSI	GKGCMC	1 cut(s)	1119
BseX3I	CGGCCG	1 cut(s)	123
BseXI	GCAGC	5 cut(s)	563, 628, 730, 1015, 1402
BseYI	CCCAGC	3 cut(s)	269, 1024, 1152
BsgI	GTGCAG	1 cut(s)	1022
Bsh1285I	CGRYCG	1 cut(s)	126
BshFI	GGCC	3 cut(s)	125, 661, 1214
BshNI	GGYRCC	1 cut(s)	1116
BsiEI	CGRYCG	1 cut(s)	126
BsiHKCI	CYCGRG	1 cut(s)	539
BsiSI	CCGG	7 cut(s)	122, 139, 250, 294, 673, 1419, 1498
BslFI	GGGAC	1 cut(s)	1340
BslI	CCNNNNNNNGG	2 cut(s)	138, 145
BsmAI	GTCTC	3 cut(s)	156, 312, 1283
BsmFI	GGGAC	1 cut(s)	1340
BsmI	GAATGC	1 cut(s)	1064
BsnI	GGCC	3 cut(s)	125, 661, 1214
Bso31I	GGTCTC	1 cut(s)	1283
BsoBI	CYCGRG	1 cut(s)	539
Bsp1286I	GDGCHC	1 cut(s)	1119
Bsp13I	TCCGGA	1 cut(s)	293
Bsp143I	GATC	5 cut(s)	334, 502, 1051, 1295, 1446
BspACI	CCGC	2 cut(s)	922, 1150
BspANI	GGCC	3 cut(s)	125, 661, 1214
BspCNI	CTCAG	2 cut(s)	153, 1483
BspEI	TCCGGA	1 cut(s)	293
BspLI	GGNNCC	4 cut(s)	120, 754, 947, 1118
BspMI	ACCTGC	1 cut(s)	136
BspPI	GGATC	2 cut(s)	497, 1290
BspT107I	GGYRCC	1 cut(s)	1116
BspTNI	GGTCTC	1 cut(s)	1283
BsrFI	RCCGGY	2 cut(s)	672, 1418
BsrI	ACTGG	2 cut(s)	983, 1334
BssAI	RCCGGY	2 cut(s)	672, 1418
BssECI	CCNNGG	4 cut(s)	114, 662, 722, 1307
BssMI	GATC	5 cut(s)	334, 502, 1051, 1295, 1446
BssNI	GRCGYC	1 cut(s)	437
BssT1I	CCWWGG	3 cut(s)	114, 722, 1307
Bst2UI	CCWGG	3 cut(s)	573, 1275, 1554
Bst4CI	ACNGT	2 cut(s)	1228, 1235
Bst6I	CTCTTC	2 cut(s)	297, 423
BstACI	GRCGYC	1 cut(s)	437
BstBAI	YACGTR	1 cut(s)	911
BstC8I	GCNNGC	4 cut(s)	670, 988, 1420, 1526
BstDEI	CTNAG	3 cut(s)	161, 1470, 1475
BstDSI	CCRYGG	1 cut(s)	662
BstF5I	GGATG	7 cut(s)	172, 250, 777, 891, 966, 1099, 1486
BstHHI	GCGC	2 cut(s)	687, 1424
BstKTI	GATC	5 cut(s)	337, 505, 1054, 1298, 1449
BstMAI	GTCTC	3 cut(s)	156, 312, 1283
BstMBI	GATC	5 cut(s)	334, 502, 1051, 1295, 1446
BstMCI	CGRYCG	1 cut(s)	126
BstMWI	GCNNNNNNNGC	5 cut(s)	202, 715, 921, 1421, 1554
BstNI	CCWGG	3 cut(s)	573, 1275, 1554
BstNSI	RCATGY	1 cut(s)	1528
BstSCI	CCNGG	6 cut(s)	137, 248, 571, 1273, 1496, 1552
BstSFI	CTRYAG	2 cut(s)	51, 1231
BstSLI	GKGCMC	1 cut(s)	1119
BstV1I	GCAGC	5 cut(s)	563, 628, 730, 1015, 1402
BstV2I	GAAGAC	1 cut(s)	457
BstX2I	RGATCY	2 cut(s)	502, 1446
BstXI	CCANNNNNNTGG	1 cut(s)	911
BstYI	RGATCY	2 cut(s)	502, 1446
BstZI	CGGCCG	1 cut(s)	123
BsuRI	GGCC	3 cut(s)	125, 661, 1214
BtgI	CCRYGG	1 cut(s)	662
BtgZI	GCGATG	5 cut(s)	177, 333, 930, 1011, 1214
BtsCI	GGATG	7 cut(s)	172, 250, 777, 891, 966, 1099, 1486
BtsI	GCAGTG	1 cut(s)	1431
BtsIMutI	CAGTG	3 cut(s)	1029, 1240, 1431
BveI	ACCTGC	1 cut(s)	136
Cac8I	GCNNGC	4 cut(s)	670, 988, 1420, 1526
CaiI	CAGNNNCTG	1 cut(s)	1031
CfoI	GCGC	2 cut(s)	687, 1424
Cfr10I	RCCGGY	2 cut(s)	672, 1418
Cfr13I	GGNCC	3 cut(s)	659, 1072, 1102
Csp6I	GTAC	1 cut(s)	188
CviAII	CATG	8 cut(s)	61, 87, 350, 841, 1042, 1366, 1525, 1569
CviQI	GTAC	1 cut(s)	188
DdeI	CTNAG	3 cut(s)	161, 1470, 1475
DpnI	GATC	5 cut(s)	336, 504, 1053, 1297, 1448
DpnII	GATC	5 cut(s)	334, 502, 1051, 1295, 1446
EaeI	YGGCCR	1 cut(s)	123
EagI	CGGCCG	1 cut(s)	123
Eam1104I	CTCTTC	2 cut(s)	297, 423
EarI	CTCTTC	2 cut(s)	297, 423
EciI	GGCGGA	1 cut(s)	911
EclXI	CGGCCG	1 cut(s)	123
Eco130I	CCWWGG	3 cut(s)	114, 722, 1307
Eco31I	GGTCTC	1 cut(s)	1283
Eco47I	GGWCC	2 cut(s)	1072, 1102
Eco52I	CGGCCG	1 cut(s)	123
Eco72I	CACGTG	1 cut(s)	911
Eco88I	CYCGRG	1 cut(s)	539
EcoRI	GAATTC	1 cut(s)	478
EcoRII	CCWGG	3 cut(s)	571, 1273, 1552
EcoT14I	CCWWGG	3 cut(s)	114, 722, 1307
ErhI	CCWWGG	3 cut(s)	114, 722, 1307
FaeI	CATG	8 cut(s)	64, 90, 353, 844, 1045, 1369, 1528, 1572
FaqI	GGGAC	1 cut(s)	1340
FatI	CATG	8 cut(s)	60, 86, 349, 840, 1041, 1365, 1524, 1568
FauNDI	CATATG	1 cut(s)	561
FbaI	TGATCA	1 cut(s)	334
FblI	GTMKAC	3 cut(s)	177, 814, 1230
Fnu4HI	GCNGC	5 cut(s)	577, 617, 719, 1004, 1416
FokI	GGATG	7 cut(s)	179, 257, 784, 898, 953, 1106, 1493
Fsp4HI	GCNGC	5 cut(s)	577, 617, 719, 1004, 1416
FspBI	CTAG	6 cut(s)	206, 287, 788, 927, 1401, 1597
GlaI	GCGC	2 cut(s)	686, 1423
GluI	GCNGC	5 cut(s)	577, 617, 719, 1004, 1416
GsaI	CCCAGC	3 cut(s)	273, 1028, 1156
GsuI	CTGGAG	1 cut(s)	138
HaeIII	GGCC	3 cut(s)	125, 661, 1214
HapII	CCGG	7 cut(s)	122, 139, 250, 294, 673, 1419, 1498
HhaI	GCGC	2 cut(s)	687, 1424
Hin1I	GRCGYC	1 cut(s)	437
Hin1II	CATG	8 cut(s)	64, 90, 353, 844, 1045, 1369, 1528, 1572
Hin6I	GCGC	2 cut(s)	685, 1422
HinP1I	GCGC	2 cut(s)	685, 1422
HincII	GTYRAC	3 cut(s)	66, 678, 815
HindII	GTYRAC	3 cut(s)	66, 678, 815
HindIII	AAGCTT	1 cut(s)	414
HinfI	GANTC	8 cut(s)	290, 305, 380, 803, 1126, 1397, 1409, 1506
HpaII	CCGG	7 cut(s)	122, 139, 250, 294, 673, 1419, 1498
HphI	GGTGA	1 cut(s)	620
Hpy166II	GTNNAC	6 cut(s)	66, 178, 644, 678, 815, 1231
Hpy188I	TCNGA	1 cut(s)	1505
Hpy188III	TCNNGA	4 cut(s)	155, 294, 539, 1562
Hpy8I	GTNNAC	6 cut(s)	66, 178, 644, 678, 815, 1231
HpyAV	CCTTC	5 cut(s)	19, 235, 743, 1204, 1423
HpyCH4III	ACNGT	2 cut(s)	1228, 1235
HpyCH4IV	ACGT	3 cut(s)	210, 437, 910
HpyF10VI	GCNNNNNNNGC	5 cut(s)	202, 715, 921, 1421, 1554
HpyF3I	CTNAG	3 cut(s)	161, 1470, 1475
HpySE526I	ACGT	3 cut(s)	210, 437, 910
Hsp92I	GRCGYC	1 cut(s)	437
Hsp92II	CATG	8 cut(s)	64, 90, 353, 844, 1045, 1369, 1528, 1572
HspAI	GCGC	2 cut(s)	685, 1422
Kpn2I	TCCGGA	1 cut(s)	293
KroI	GCCGGC	1 cut(s)	1418
KroNI	GCCGGC	1 cut(s)	1420
Ksp22I	TGATCA	1 cut(s)	334
Kzo9I	GATC	5 cut(s)	334, 502, 1051, 1295, 1446
LmnI	GCTCC	2 cut(s)	758, 1266
Lsp1109I	GCAGC	5 cut(s)	563, 628, 730, 1015, 1402
LweI	GCATC	3 cut(s)	235, 696, 762
MaeI	CTAG	6 cut(s)	206, 287, 788, 927, 1401, 1597
MaeII	ACGT	3 cut(s)	210, 437, 910
MaeIII	GTNAC	5 cut(s)	223, 340, 844, 1222, 1349
MalI	GATC	5 cut(s)	336, 504, 1053, 1297, 1448
MboI	GATC	5 cut(s)	334, 502, 1051, 1295, 1446
MboII	GAAGA	8 cut(s)	269, 314, 422, 440, 462, 482, 752, 1073
MflI	RGATCY	2 cut(s)	502, 1446
MhlI	GDGCHC	1 cut(s)	1119
MluCI	AATT	9 cut(s)	260, 478, 548, 580, 743, 1088, 1243, 1252, 1578
MlyI	GAGTC	2 cut(s)	314, 1406
MmeI	TCCRAC	4 cut(s)	385, 778, 1040, 1147
MroI	TCCGGA	1 cut(s)	293
MroNI	GCCGGC	1 cut(s)	1418
MroXI	GAANNNNTTC	1 cut(s)	261
MseI	TTAA	6 cut(s)	15, 551, 833, 1011, 1242, 1443
MspA1I	CMGCKG	1 cut(s)	1152
MspI	CCGG	7 cut(s)	122, 139, 250, 294, 673, 1419, 1498
MspR9I	CCNGG	6 cut(s)	139, 250, 573, 1275, 1498, 1554
Mva1269I	GAATGC	1 cut(s)	1064
MvaI	CCWGG	3 cut(s)	573, 1275, 1554
MwoI	GCNNNNNNNGC	5 cut(s)	202, 715, 921, 1421, 1554
NaeI	GCCGGC	1 cut(s)	1420
NciI	CCSGG	3 cut(s)	139, 250, 1498
NdeI	CATATG	1 cut(s)	561
NdeII	GATC	5 cut(s)	334, 502, 1051, 1295, 1446
NgoMIV	GCCGGC	1 cut(s)	1418
NlaIII	CATG	8 cut(s)	64, 90, 353, 844, 1045, 1369, 1528, 1572
NlaIV	GGNNCC	4 cut(s)	120, 754, 947, 1118
NmuCI	GTSAC	4 cut(s)	223, 340, 1222, 1349
NspI	RCATGY	1 cut(s)	1528
PaeI	GCATGC	1 cut(s)	1528
PaeR7I	CTCGAG	1 cut(s)	539
PaqCI	CACCTGC	1 cut(s)	136
PctI	GAATGC	1 cut(s)	1064
PdiI	GCCGGC	1 cut(s)	1420
PdmI	GAANNNNTTC	1 cut(s)	261
PfeI	GAWTC	6 cut(s)	290, 380, 803, 1126, 1409, 1506
PkrI	GCNGC	5 cut(s)	578, 618, 720, 1005, 1417
PleI	GAGTC	2 cut(s)	313, 1405
PmaCI	CACGTG	1 cut(s)	911
PmlI	CACGTG	1 cut(s)	911
PpsI	GAGTC	2 cut(s)	313, 1405
Ppu21I	YACGTR	1 cut(s)	911
PshBI	ATTAAT	1 cut(s)	1011
Psp6I	CCWGG	3 cut(s)	571, 1273, 1552
PspCI	CACGTG	1 cut(s)	911
PspFI	CCCAGC	3 cut(s)	269, 1024, 1152
PspGI	CCWGG	3 cut(s)	571, 1273, 1552
PspN4I	GGNNCC	4 cut(s)	120, 754, 947, 1118
PspPI	GGNCC	3 cut(s)	659, 1072, 1102
PstNI	CAGNNNCTG	1 cut(s)	1031
PsuI	RGATCY	2 cut(s)	502, 1446
RsaI	GTAC	1 cut(s)	189
RsaNI	GTAC	1 cut(s)	188
SalI	GTCGAC	1 cut(s)	813
SaqAI	TTAA	6 cut(s)	15, 551, 833, 1011, 1242, 1443
SatI	GCNGC	5 cut(s)	577, 617, 719, 1004, 1416
Sau3AI	GATC	5 cut(s)	334, 502, 1051, 1295, 1446
Sau96I	GGNCC	3 cut(s)	659, 1072, 1102
SchI	GAGTC	2 cut(s)	314, 1406
ScrFI	CCNGG	6 cut(s)	139, 250, 573, 1275, 1498, 1554
SduI	GDGCHC	1 cut(s)	1119
SfaNI	GCATC	3 cut(s)	235, 696, 762
SfcI	CTRYAG	2 cut(s)	51, 1231
Sfr274I	CTCGAG	1 cut(s)	539
SinI	GGWCC	2 cut(s)	1072, 1102
SlaI	CTCGAG	1 cut(s)	539
SmlI	CTYRAG	2 cut(s)	373, 539
SmoI	CTYRAG	2 cut(s)	373, 539
SphI	GCATGC	1 cut(s)	1528
Sse9I	AATT	9 cut(s)	260, 478, 548, 580, 743, 1088, 1243, 1252, 1578
SsiI	CCGC	2 cut(s)	922, 1150
SspMI	CTAG	6 cut(s)	206, 287, 788, 927, 1401, 1597
StyD4I	CCNGG	6 cut(s)	137, 248, 571, 1273, 1496, 1552
StyI	CCWWGG	3 cut(s)	114, 722, 1307
TaaI	ACNGT	2 cut(s)	1228, 1235
TaiI	ACGT	3 cut(s)	213, 440, 913
TaqI	TCGA	4 cut(s)	540, 712, 814, 1054
TasI	AATT	9 cut(s)	260, 478, 548, 580, 743, 1088, 1243, 1252, 1578
TfiI	GAWTC	6 cut(s)	290, 380, 803, 1126, 1409, 1506
Tru1I	TTAA	6 cut(s)	15, 551, 833, 1011, 1242, 1443
Tru9I	TTAA	6 cut(s)	15, 551, 833, 1011, 1242, 1443
TscAI	CASTG	3 cut(s)	1036, 1240, 1431
TseFI	GTSAC	4 cut(s)	223, 340, 1222, 1349
TseI	GCWGC	5 cut(s)	576, 616, 718, 1003, 1415
Tsp45I	GTSAC	4 cut(s)	223, 340, 1222, 1349
TspDTI	ATGAA	4 cut(s)	17, 795, 1422, 1590
TspGWI	ACGGA	1 cut(s)	471
TspRI	CASTG	3 cut(s)	1036, 1240, 1431
VpaK11BI	GGWCC	2 cut(s)	1072, 1102
VspI	ATTAAT	1 cut(s)	1011
XapI	RAATTY	4 cut(s)	260, 478, 743, 1578
XceI	RCATGY	1 cut(s)	1528
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1127
XhoI	CTCGAG	1 cut(s)	539
XmiI	GTMKAC	3 cut(s)	177, 814, 1230
XmnI	GAANNNNTTC	1 cut(s)	261
XspI	CTAG	6 cut(s)	206, 287, 788, 927, 1401, 1597
ZraI	GACGTC	1 cut(s)	438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.