Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23020 |
| fragaria_vesca | FvH4_4g02020 |
| malus_domestica | MD13G1203500.v1.1 MD16G1205100.v1.1 |
| prunus_persica | Prupe.1G026500_v2.0.a1 |
| pyrus_communis | pycom13g17680 |
| rosa_chinensis | RchiOBHm_Chr4g0388991 RchiOBHm_Chr4g0389031 RchiOBHm_Chr4g0389081 RchiOBHm_Chr4g0389161 RchiOBHm_Chr4g0389171 |
| rosa_laevigata | RLG00000010001 |
| rosa_multiflora | Rmu_sc0001395.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00335330 |
| rosa_rugosa | Rorug03G0321900 |
| rosa_samantha | Rh4AG026400 Rh4BG019600 Rh4BG019800 Rh4BG019900 Rh4BG020200 Rh4BG020300 Rh4CG029400 Rh4DG020000 Rh4DG020400 Rh4DG020500 Rh4DG020900 |
| rosa_wichuraiana | Rw4G001950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 159 |
| AcsI | RAATTY | 1 cut(s) | 114 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 159 |
| AflIII | ACRYGT | 1 cut(s) | 41 |
| AgsI | TTSAA | 1 cut(s) | 283 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 378, 410 |
| AluBI | AGCT | 6 cut(s) | 11, 49, 102, 222, 356, 430 |
| AluI | AGCT | 6 cut(s) | 11, 49, 102, 222, 356, 430 |
| Alw26I | GTCTC | 1 cut(s) | 161 |
| Aor13HI | TCCGGA | 1 cut(s) | 159 |
| ApoI | RAATTY | 1 cut(s) | 114 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 258, 290 |
| AsuHPI | GGTGA | 1 cut(s) | 418 |
| BccI | CCATC | 2 cut(s) | 265, 491 |
| BclI | TGATCA | 1 cut(s) | 423 |
| BcoDI | GTCTC | 1 cut(s) | 161 |
| BmsI | GCATC | 3 cut(s) | 156, 204, 361 |
| BsaWI | WCCGGW | 1 cut(s) | 159 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 141, 171 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 159 |
| Bse1I | ACTGG | 1 cut(s) | 246 |
| Bse3DI | GCAATG | 1 cut(s) | 381 |
| BseAI | TCCGGA | 1 cut(s) | 159 |
| BseGI | GGATG | 3 cut(s) | 195, 301, 502 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 159 |
| BseMI | GCAATG | 1 cut(s) | 381 |
| BseMII | CTCAG | 1 cut(s) | 350 |
| BseNI | ACTGG | 1 cut(s) | 246 |
| BsiSI | CCGG | 1 cut(s) | 160 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 159 |
| BsmAI | GTCTC | 1 cut(s) | 161 |
| Bsp13I | TCCGGA | 1 cut(s) | 159 |
| Bsp143I | GATC | 1 cut(s) | 423 |
| BspCNI | CTCAG | 1 cut(s) | 351 |
| BspEI | TCCGGA | 1 cut(s) | 159 |
| BsrDI | GCAATG | 1 cut(s) | 381 |
| BsrI | ACTGG | 1 cut(s) | 246 |
| BssMI | GATC | 1 cut(s) | 423 |
| Bst4CI | ACNGT | 1 cut(s) | 406 |
| BstDEI | CTNAG | 1 cut(s) | 359 |
| BstF5I | GGATG | 3 cut(s) | 195, 301, 502 |
| BstKTI | GATC | 1 cut(s) | 426 |
| BstMAI | GTCTC | 1 cut(s) | 161 |
| BstMBI | GATC | 1 cut(s) | 423 |
| BstNSI | RCATGY | 1 cut(s) | 45 |
| BtsCI | GGATG | 3 cut(s) | 195, 301, 502 |
| CviAII | CATG | 4 cut(s) | 42, 61, 71, 503 |
| CviJI | RGCY | 7 cut(s) | 11, 49, 102, 122, 222, 356, 430 |
| CviKI_1 | RGCY | 7 cut(s) | 11, 49, 102, 122, 222, 356, 430 |
| DdeI | CTNAG | 1 cut(s) | 359 |
| DpnI | GATC | 1 cut(s) | 425 |
| DpnII | GATC | 1 cut(s) | 423 |
| Eco32I | GATATC | 1 cut(s) | 216 |
| EcoRV | GATATC | 1 cut(s) | 216 |
| FaeI | CATG | 4 cut(s) | 45, 64, 74, 506 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 378, 410 |
| FatI | CATG | 4 cut(s) | 41, 60, 70, 502 |
| FbaI | TGATCA | 1 cut(s) | 423 |
| FokI | GGATG | 3 cut(s) | 182, 308, 509 |
| HapII | CCGG | 1 cut(s) | 160 |
| Hin1II | CATG | 4 cut(s) | 45, 64, 74, 506 |
| HindIII | AAGCTT | 2 cut(s) | 9, 220 |
| HinfI | GANTC | 2 cut(s) | 67, 279 |
| HpaII | CCGG | 1 cut(s) | 160 |
| HphI | GGTGA | 1 cut(s) | 418 |
| Hpy188I | TCNGA | 5 cut(s) | 84, 278, 341, 360, 493 |
| Hpy188III | TCNNGA | 1 cut(s) | 160 |
| HpyAV | CCTTC | 1 cut(s) | 380 |
| HpyCH4III | ACNGT | 1 cut(s) | 406 |
| HpyCH4V | TGCA | 4 cut(s) | 169, 195, 227, 374 |
| HpyF3I | CTNAG | 1 cut(s) | 359 |
| Hsp92II | CATG | 4 cut(s) | 45, 64, 74, 506 |
| Kpn2I | TCCGGA | 1 cut(s) | 159 |
| Ksp22I | TGATCA | 1 cut(s) | 423 |
| Kzo9I | GATC | 1 cut(s) | 423 |
| LpnPI | CCDG | 4 cut(s) | 155, 166, 173, 227 |
| LweI | GCATC | 3 cut(s) | 156, 204, 361 |
| MalI | GATC | 1 cut(s) | 425 |
| MboI | GATC | 1 cut(s) | 423 |
| MboII | GAAGA | 2 cut(s) | 175, 476 |
| MluCI | AATT | 2 cut(s) | 114, 230 |
| MmeI | TCCRAC | 2 cut(s) | 273, 319 |
| MnlI | CCTC | 2 cut(s) | 166, 487 |
| MroI | TCCGGA | 1 cut(s) | 159 |
| MseI | TTAA | 2 cut(s) | 6, 348 |
| MspI | CCGG | 1 cut(s) | 160 |
| NdeII | GATC | 1 cut(s) | 423 |
| NlaIII | CATG | 4 cut(s) | 45, 64, 74, 506 |
| NspI | RCATGY | 1 cut(s) | 45 |
| PciI | ACATGT | 1 cut(s) | 41 |
| PfeI | GAWTC | 2 cut(s) | 67, 279 |
| PscI | ACATGT | 1 cut(s) | 41 |
| SaqAI | TTAA | 2 cut(s) | 6, 348 |
| Sau3AI | GATC | 1 cut(s) | 423 |
| SetI | ASST | 8 cut(s) | 13, 51, 104, 177, 224, 358, 391, 432 |
| SfaNI | GCATC | 3 cut(s) | 156, 204, 361 |
| Sse9I | AATT | 2 cut(s) | 114, 230 |
| TaaI | ACNGT | 1 cut(s) | 406 |
| TaqI | TCGA | 1 cut(s) | 317 |
| TasI | AATT | 2 cut(s) | 114, 230 |
| TfiI | GAWTC | 2 cut(s) | 67, 279 |
| Tru1I | TTAA | 2 cut(s) | 6, 348 |
| Tru9I | TTAA | 2 cut(s) | 6, 348 |
| TspDTI | ATGAA | 3 cut(s) | 59, 392, 399 |
| XapI | RAATTY | 1 cut(s) | 114 |
| XceI | RCATGY | 1 cut(s) | 45 |