Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23020 |
| fragaria_vesca | FvH4_4g02020 |
| malus_domestica | MD13G1203500.v1.1 MD16G1205100.v1.1 |
| prunus_persica | Prupe.1G026500_v2.0.a1 |
| pyrus_communis | pycom13g17680 |
| rosa_chinensis | RchiOBHm_Chr4g0388991 RchiOBHm_Chr4g0389031 RchiOBHm_Chr4g0389081 RchiOBHm_Chr4g0389161 RchiOBHm_Chr4g0389171 |
| rosa_laevigata | RLG00000010001 |
| rosa_multiflora | Rmu_sc0001395.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00335330 |
| rosa_rugosa | Rorug03G0321900 |
| rosa_samantha | Rh4AG026400 Rh4BG019600 Rh4BG019800 Rh4BG019900 Rh4BG020200 Rh4BG020300 Rh4CG029400 Rh4DG020000 Rh4DG020400 Rh4DG020500 Rh4DG020900 |
| rosa_wichuraiana | Rw4G001950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 204 |
| AcsI | RAATTY | 1 cut(s) | 54 |
| AcuI | CTGAAG | 1 cut(s) | 119 |
| AfaI | GTAC | 1 cut(s) | 126 |
| AgsI | TTSAA | 1 cut(s) | 159 |
| AluBI | AGCT | 2 cut(s) | 36, 162 |
| AluI | AGCT | 2 cut(s) | 36, 162 |
| ApoI | RAATTY | 1 cut(s) | 54 |
| AsuHPI | GGTGA | 1 cut(s) | 80 |
| BfaI | CTAG | 1 cut(s) | 63 |
| BfmI | CTRYAG | 1 cut(s) | 37 |
| BmsI | GCATC | 2 cut(s) | 96, 144 |
| BsaAI | YACGTR | 1 cut(s) | 128 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 104, 134 |
| Bse3DI | GCAATG | 1 cut(s) | 93 |
| BseGI | GGATG | 1 cut(s) | 135 |
| BseMI | GCAATG | 1 cut(s) | 93 |
| BsrDI | GCAATG | 1 cut(s) | 93 |
| BstBAI | YACGTR | 1 cut(s) | 128 |
| BstF5I | GGATG | 1 cut(s) | 135 |
| BstSFI | CTRYAG | 1 cut(s) | 37 |
| BtsCI | GGATG | 1 cut(s) | 135 |
| Csp6I | GTAC | 1 cut(s) | 125 |
| CviJI | RGCY | 3 cut(s) | 36, 62, 162 |
| CviKI_1 | RGCY | 3 cut(s) | 36, 62, 162 |
| CviQI | GTAC | 1 cut(s) | 125 |
| Eco57I | CTGAAG | 1 cut(s) | 119 |
| FaiI | YATR | 5 cut(s) | 12, 39, 74, 81, 204 |
| FokI | GGATG | 1 cut(s) | 122 |
| FspBI | CTAG | 1 cut(s) | 63 |
| HindIII | AAGCTT | 1 cut(s) | 160 |
| HinfI | GANTC | 2 cut(s) | 7, 113 |
| HphI | GGTGA | 1 cut(s) | 80 |
| Hpy188I | TCNGA | 2 cut(s) | 48, 99 |
| Hpy188III | TCNNGA | 1 cut(s) | 23 |
| HpyCH4IV | ACGT | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 4 cut(s) | 86, 109, 135, 167 |
| HpySE526I | ACGT | 1 cut(s) | 127 |
| LpnPI | CCDG | 4 cut(s) | 13, 36, 95, 102 |
| LweI | GCATC | 2 cut(s) | 96, 144 |
| MaeI | CTAG | 1 cut(s) | 63 |
| MaeII | ACGT | 1 cut(s) | 127 |
| MboII | GAAGA | 2 cut(s) | 112, 115 |
| MfeI | CAATTG | 1 cut(s) | 179 |
| MluCI | AATT | 4 cut(s) | 18, 54, 170, 179 |
| MlyI | GAGTC | 2 cut(s) | 16, 122 |
| MnlI | CCTC | 1 cut(s) | 187 |
| MunI | CAATTG | 1 cut(s) | 179 |
| PleI | GAGTC | 2 cut(s) | 15, 121 |
| PpsI | GAGTC | 2 cut(s) | 15, 121 |
| Ppu21I | YACGTR | 1 cut(s) | 128 |
| PsiI | TTATAA | 1 cut(s) | 204 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 25, 57 |
| RsaI | GTAC | 1 cut(s) | 126 |
| RsaNI | GTAC | 1 cut(s) | 125 |
| SchI | GAGTC | 2 cut(s) | 16, 122 |
| SetI | ASST | 5 cut(s) | 32, 38, 130, 164, 178 |
| SfaNI | GCATC | 2 cut(s) | 96, 144 |
| SfcI | CTRYAG | 1 cut(s) | 37 |
| SgeI | CNNG | 7 cut(s) | 35, 40, 75, 122, 129, 140, 171 |
| Sse9I | AATT | 4 cut(s) | 18, 54, 170, 179 |
| SspMI | CTAG | 1 cut(s) | 63 |
| TaiI | ACGT | 1 cut(s) | 130 |
| TasI | AATT | 4 cut(s) | 18, 54, 170, 179 |
| XapI | RAATTY | 1 cut(s) | 54 |
| XspI | CTAG | 1 cut(s) | 63 |