MD17G1248500.v1.1

Peptidase C26

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
29738033 .. 29740679
2647 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1248500.v1.1.491

Sequence Viewer

Length: 1317 bp
ATGGATTCTGATCTCTCCGTTATCCTCCCTCGCGTCCTCATCGTCTCTCGACGTACCCTTCGCAAGAACAAGTTCGTAGATTTTGTGGGAGAATACCATCTTGATCTTATAGTAGGTTATGGAGCAGTACCAGTAATCGTGCCCCGAGTGAATGGGGTGCACATGTTATTGGATAGCTTCGAGCCCATCCATGGAGTCCTCCTCTGCGAAGGAGAAGACATCGACCCGTCTCTCTACGAATCAGAGGTTGACGTCTCAGGTCTTTCACCCGAAGATTTGGAAGAAATCAGGAAGCTCCATGCAAGCGACACAGCCATCGACAAAGAAAAAGACTCGATCGAACTGAGGCTGGCGAAGCTCTGCCTCGAACGGAACATACCCTACTTGGGAATATGCAGAGGCTCACAGGTCTTGAATGTGGCATGTGGAGGAACCCTTTACCAAGACATCGAGAGAGAGCTCTCGAAAAAGCACAGCAAATTCGATGATCGAAAAAATGGTGTGTATGTGCAGCATATAAATTATGAAGACTATGATGGGCATAGGCATGTGGTGAATGTGGTGGAGAAGACTCCTTTGCACCATTGGTTTAAGGAGTCTATGGAAGCAGGAGAAGGGAAGATGCAGATTAGGGTTAACAGCTACCACCATCAAGGTGTTAAGAAATTGGCACAGAGATTTGTGCCAATGGCATTTGCACCAGATGGTTTGATTGAAGGGTTTTACGATCCAGACGCTTATAATCCTAAGGAAGGTAAGTTTATCATGGGATTACAGTTTCATCCAGAGAGAATGAGGGGACCAGATTCTGATGAGTTTGATTACCCTGGTTGCCCATCTGCTTATCAGGAATTTGTGAAGGCAGCAATTGCTTACAAGAATAAGCTTAATAGCTCAGCTTCAGTACTACCACAATCTTTGAAGCTGGATGGGGAAATGGAGAAAAAGAGAAAGAAAATTCTTAGAAGCTTCTCAATTGCAAGAAACATATACACAGGAGGCCTAGGAGGTGGTCTCCATCCAATCAAAGAATCTGAACTTGAAGCTGGAGCAGAATTCCTTGAGTCGAACACAGCACTGAGCTTACAGCAGGAGAATAGACTGAAGCAAATGGGGGCAACAGTGAGAAATGCAGGTTCCTACAAACAGAGATTGAAGTTGAATGAGGAGAGAGAAAGACTGGCAAGGAATGTGATGGGGAAAATGTCAGTGGAGCAATTGTCTGATCTGTTGGCCTTCTACCATATGATGGGGAAAATCTGTTCTGAAGTGGTGGAAAGAAAGCTGAATGCGATTGTCAATGATATTGGTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

439

Amino Acids

49.47

Weight (kDa)

6.23

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C26 PF07722 28 - 263 3.7e-40 Peptidase C26
GATase PF00117 114 - 270 2.4e-11 Glutamine amidotransferase class-I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 741
AatII GACGTC 1 cut(s) 255
Acc36I ACCTGC 1 cut(s) 1124
AccB7I CCANNNNNTGG 1 cut(s) 1249
AccII CGCG 1 cut(s) 33
AclWI GGATC 1 cut(s) 722
AcsI RAATTY 4 cut(s) 479, 851, 957, 1055
AcuI CTGAAG 3 cut(s) 885, 1124, 1287
AcyI GRCGYC 1 cut(s) 252
AfaI GTAC 3 cut(s) 55, 129, 906
AfiI CCNNNNNNNGG 4 cut(s) 191, 386, 752, 1249
AflIII ACRYGT 1 cut(s) 162
AgsI TTSAA 6 cut(s) 415, 716, 922, 1043, 1156, 1162
AjnI CCWGG 1 cut(s) 826
AloI GAACNNNNNNTCC 2 cut(s) 1246, 1278
Alw21I GWGCWC 2 cut(s) 162, 462
Alw26I GTCTC 4 cut(s) 49, 234, 259, 1019
Alw44I GTGCAC 1 cut(s) 158
AlwI GGATC 1 cut(s) 722
AlwNI CAGNNNCTG 1 cut(s) 809
Ama87I CYCGRG 1 cut(s) 144
AoxI GGCC 2 cut(s) 1000, 1233
ApaLI GTGCAC 1 cut(s) 158
ApeKI GCWGC 2 cut(s) 511, 863
ApoI RAATTY 4 cut(s) 479, 851, 957, 1055
ArsI GACNNNNNNTTYG 2 cut(s) 42, 74
Asp700I GAANNNNTTC 1 cut(s) 71
AspA2I CCTAGG 1 cut(s) 1003
AspS9I GGNCC 1 cut(s) 800
AsuHPI GGTGA 2 cut(s) 258, 565
AvaI CYCGRG 1 cut(s) 144
AvaII GGWCC 1 cut(s) 800
AvrII CCTAGG 1 cut(s) 1003
AxyI CCTNAGG 1 cut(s) 747
BaeGI GKGCMC 2 cut(s) 144, 162
BanII GRGCYC 2 cut(s) 186, 462
BbsI GAAGAC 3 cut(s) 222, 534, 575
Bbv12I GWGCWC 2 cut(s) 162, 462
BbvI GCAGC 2 cut(s) 523, 875
BciT130I CCWGG 1 cut(s) 828
BcoDI GTCTC 4 cut(s) 49, 234, 259, 1019
BfaI CTAG 1 cut(s) 1004
BfuAI ACCTGC 1 cut(s) 1124
BisI GCNGC 2 cut(s) 512, 864
BlnI CCTAGG 1 cut(s) 1003
BlpI GCTNAGC 1 cut(s) 895
BlsI GCNGC 2 cut(s) 513, 865
BmcAI AGTACT 1 cut(s) 906
Bme1390I CCNGG 1 cut(s) 828
Bme18I GGWCC 1 cut(s) 800
BmeT110I CYCGRG 1 cut(s) 144
BmgT120I GGNCC 1 cut(s) 800
BmiI GGNNCC 3 cut(s) 433, 801, 1138
BmrFI CCNGG 1 cut(s) 828
BmsI GCATC 1 cut(s) 612
BpiI GAAGAC 3 cut(s) 222, 534, 575
BplI GAGNNNNNCTC 4 cut(s) 186, 218, 999, 1031
BpmI CTGGAG 1 cut(s) 1068
Bpu1102I GCTNAGC 1 cut(s) 895
BpuEI CTTGAG 1 cut(s) 1082
BsaBI GATNNNNATC 1 cut(s) 9
BsaHI GRCGYC 1 cut(s) 252
BsaI GGTCTC 1 cut(s) 1019
BsaJI CCNNGG 3 cut(s) 190, 826, 1003
BsaXI ACNNNNNCTCC 2 cut(s) 1205, 1235
Bsc4I CCNNNNNNNGG 4 cut(s) 191, 386, 752, 1249
Bse1I ACTGG 2 cut(s) 131, 1185
Bse21I CCTNAGG 1 cut(s) 747
Bse8I GATNNNNATC 1 cut(s) 9
BseBI CCWGG 1 cut(s) 828
BseDI CCNNGG 3 cut(s) 190, 826, 1003
BseGI GGATG 4 cut(s) 186, 781, 934, 1018
BseJI GATNNNNATC 1 cut(s) 9
BseLI CCNNNNNNNGG 4 cut(s) 191, 386, 752, 1249
BseMII CTCAG 4 cut(s) 270, 335, 909, 1070
BseNI ACTGG 2 cut(s) 131, 1185
BseRI GAGGAG 2 cut(s) 191, 1181
BseSI GKGCMC 2 cut(s) 144, 162
BseXI GCAGC 2 cut(s) 523, 875
BsgI GTGCAG 1 cut(s) 530
Bsh1236I CGCG 1 cut(s) 33
Bsh1285I CGRYCG 1 cut(s) 339
BshFI GGCC 2 cut(s) 1002, 1235
BsiEI CGRYCG 1 cut(s) 339
BsiHKAI GWGCWC 2 cut(s) 162, 462
BsiHKCI CYCGRG 1 cut(s) 144
BslFI GGGAC 1 cut(s) 813
BslI CCNNNNNNNGG 4 cut(s) 191, 386, 752, 1249
BsmAI GTCTC 4 cut(s) 49, 234, 259, 1019
BsmBI CGTCTC 3 cut(s) 49, 234, 259
BsmFI GGGAC 1 cut(s) 813
BsmI GAATGC 1 cut(s) 1294
BsnI GGCC 2 cut(s) 1002, 1235
Bso31I GGTCTC 1 cut(s) 1019
BsoBI CYCGRG 1 cut(s) 144
Bsp1286I GDGCHC 4 cut(s) 144, 162, 186, 462
Bsp143I GATC 6 cut(s) 10, 103, 336, 487, 727, 1225
Bsp1720I GCTNAGC 1 cut(s) 895
Bsp19I CCATGG 1 cut(s) 190
BspANI GGCC 2 cut(s) 1002, 1235
BspCNI CTCAG 4 cut(s) 269, 336, 908, 1071
BspFNI CGCG 1 cut(s) 33
BspLI GGNNCC 3 cut(s) 433, 801, 1138
BspMI ACCTGC 1 cut(s) 1124
BspPI GGATC 1 cut(s) 722
BspTNI GGTCTC 1 cut(s) 1019
BsrI ACTGG 2 cut(s) 131, 1185
BssECI CCNNGG 3 cut(s) 190, 826, 1003
BssMI GATC 6 cut(s) 10, 103, 336, 487, 727, 1225
BssNI GRCGYC 1 cut(s) 252
BssT1I CCWWGG 2 cut(s) 190, 1003
Bst2UI CCWGG 1 cut(s) 828
Bst4CI ACNGT 2 cut(s) 777, 1123
BstACI GRCGYC 1 cut(s) 252
BstAPI GCANNNNNTGC 1 cut(s) 869
BstC8I GCNNGC 2 cut(s) 304, 351
BstDEI CTNAG 6 cut(s) 256, 344, 747, 895, 962, 1079
BstDSI CCRYGG 1 cut(s) 190
BstENI CCTNNNNNAGG 1 cut(s) 750
BstF5I GGATG 4 cut(s) 186, 781, 934, 1018
BstFNI CGCG 1 cut(s) 33
BstKTI GATC 6 cut(s) 13, 106, 339, 490, 730, 1228
BstMAI GTCTC 4 cut(s) 49, 234, 259, 1019
BstMBI GATC 6 cut(s) 10, 103, 336, 487, 727, 1225
BstMCI CGRYCG 1 cut(s) 339
BstMWI GCNNNNNNNGC 2 cut(s) 355, 869
BstNI CCWGG 1 cut(s) 828
BstNSI RCATGY 3 cut(s) 166, 426, 551
BstSCI CCNGG 1 cut(s) 826
BstSLI GKGCMC 2 cut(s) 144, 162
BstUI CGCG 1 cut(s) 33
BstV1I GCAGC 2 cut(s) 523, 875
BstV2I GAAGAC 3 cut(s) 222, 534, 575
Bsu36I CCTNAGG 1 cut(s) 747
BsuRI GGCC 2 cut(s) 1002, 1235
BtgI CCRYGG 1 cut(s) 190
BtsCI GGATG 4 cut(s) 186, 781, 934, 1018
BtsIMutI CAGTG 3 cut(s) 1076, 1128, 1215
BveI ACCTGC 1 cut(s) 1124
Cac8I GCNNGC 2 cut(s) 304, 351
CaiI CAGNNNCTG 1 cut(s) 809
Cfr13I GGNCC 1 cut(s) 800
CseI GACGC 2 cut(s) 22, 743
Csp6I GTAC 3 cut(s) 54, 128, 905
CspCI CAANNNNNGTGG 2 cut(s) 900, 935
CviAII CATG 6 cut(s) 163, 191, 299, 423, 548, 766
CviQI GTAC 3 cut(s) 54, 128, 905
DdeI CTNAG 6 cut(s) 256, 344, 747, 895, 962, 1079
DpnI GATC 6 cut(s) 12, 105, 338, 489, 729, 1227
DpnII GATC 6 cut(s) 10, 103, 336, 487, 727, 1225
Ecl136II GAGCTC 1 cut(s) 460
Eco130I CCWWGG 2 cut(s) 190, 1003
Eco147I AGGCCT 1 cut(s) 1002
Eco24I GRGCYC 2 cut(s) 186, 462
Eco31I GGTCTC 1 cut(s) 1019
Eco47I GGWCC 1 cut(s) 800
Eco53kI GAGCTC 1 cut(s) 460
Eco57I CTGAAG 3 cut(s) 885, 1124, 1287
Eco81I CCTNAGG 1 cut(s) 747
Eco88I CYCGRG 1 cut(s) 144
EcoICRI GAGCTC 1 cut(s) 460
EcoNI CCTNNNNNAGG 1 cut(s) 750
EcoRI GAATTC 1 cut(s) 1055
EcoRII CCWGG 1 cut(s) 826
EcoT14I CCWWGG 2 cut(s) 190, 1003
EcoT38I GRGCYC 2 cut(s) 186, 462
ErhI CCWWGG 2 cut(s) 190, 1003
Esp3I CGTCTC 3 cut(s) 49, 234, 259
FaeI CATG 6 cut(s) 166, 194, 302, 426, 551, 769
FaqI GGGAC 1 cut(s) 813
FatI CATG 6 cut(s) 162, 190, 298, 422, 547, 765
FauNDI CATATG 1 cut(s) 1245
Fnu4HI GCNGC 2 cut(s) 512, 864
FokI GGATG 4 cut(s) 173, 768, 941, 1005
FriOI GRGCYC 2 cut(s) 186, 462
Fsp4HI GCNGC 2 cut(s) 512, 864
FspBI CTAG 1 cut(s) 1004
GluI GCNGC 2 cut(s) 512, 864
GsuI CTGGAG 1 cut(s) 1068
HaeIII GGCC 2 cut(s) 1002, 1235
HgaI GACGC 2 cut(s) 22, 743
Hin1I GRCGYC 1 cut(s) 252
Hin1II CATG 6 cut(s) 166, 194, 302, 426, 551, 769
HincII GTYRAC 2 cut(s) 250, 637
HindII GTYRAC 2 cut(s) 250, 637
HindIII AAGCTT 2 cut(s) 884, 967
HinfI GANTC 9 cut(s) 5, 195, 239, 332, 571, 596, 806, 1031, 1064
HpaI GTTAAC 1 cut(s) 637
HphI GGTGA 2 cut(s) 258, 565
Hpy166II GTNNAC 3 cut(s) 160, 250, 637
Hpy188I TCNGA 6 cut(s) 10, 244, 811, 1036, 1225, 1267
Hpy8I GTNNAC 3 cut(s) 160, 250, 637
Hpy99I CGWCG 1 cut(s) 54
HpyAV CCTTC 7 cut(s) 68, 203, 608, 710, 746, 853, 1246
HpyCH4III ACNGT 2 cut(s) 777, 1123
HpyCH4IV ACGT 2 cut(s) 52, 252
HpyCH4V TGCA 9 cut(s) 160, 302, 396, 511, 580, 625, 698, 980, 1133
HpyF10VI GCNNNNNNNGC 2 cut(s) 355, 869
HpyF3I CTNAG 6 cut(s) 256, 344, 747, 895, 962, 1079
HpySE526I ACGT 2 cut(s) 52, 252
Hsp92I GRCGYC 1 cut(s) 252
Hsp92II CATG 6 cut(s) 166, 194, 302, 426, 551, 769
KspAI GTTAAC 1 cut(s) 637
Kzo9I GATC 6 cut(s) 10, 103, 336, 487, 727, 1225
LmnI GCTCC 4 cut(s) 122, 300, 1049, 1213
Lsp1109I GCAGC 2 cut(s) 523, 875
LweI GCATC 1 cut(s) 612
MaeI CTAG 1 cut(s) 1004
MaeII ACGT 2 cut(s) 52, 252
MalI GATC 6 cut(s) 12, 105, 338, 489, 729, 1227
MboI GATC 6 cut(s) 10, 103, 336, 487, 727, 1225
MboII GAAGA 6 cut(s) 227, 284, 293, 539, 580, 631
MfeI CAATTG 3 cut(s) 867, 975, 1217
MhlI GDGCHC 4 cut(s) 144, 162, 186, 462
MluCI AATT 9 cut(s) 479, 520, 665, 851, 867, 957, 975, 1055, 1217
MlyI GAGTC 5 cut(s) 204, 326, 565, 605, 1073
MroXI GAANNNNTTC 1 cut(s) 71
MseI TTAA 4 cut(s) 591, 636, 660, 888
MslI CAYNNNNRTG 2 cut(s) 546, 654
MspR9I CCNGG 1 cut(s) 828
MunI CAATTG 3 cut(s) 867, 975, 1217
Mva1269I GAATGC 1 cut(s) 1294
MvaI CCWGG 1 cut(s) 828
MvnI CGCG 1 cut(s) 33
MwoI GCNNNNNNNGC 2 cut(s) 355, 869
NcoI CCATGG 1 cut(s) 190
NdeI CATATG 1 cut(s) 1245
NdeII GATC 6 cut(s) 10, 103, 336, 487, 727, 1225
NlaIII CATG 6 cut(s) 166, 194, 302, 426, 551, 769
NlaIV GGNNCC 3 cut(s) 433, 801, 1138
NspI RCATGY 3 cut(s) 166, 426, 551
PceI AGGCCT 1 cut(s) 1002
PciI ACATGT 1 cut(s) 162
PctI GAATGC 1 cut(s) 1294
PdmI GAANNNNTTC 1 cut(s) 71
PfeI GAWTC 4 cut(s) 5, 239, 806, 1031
PflMI CCANNNNNTGG 1 cut(s) 1249
PkrI GCNGC 2 cut(s) 513, 865
Ple19I CGATCG 1 cut(s) 339
PleI GAGTC 5 cut(s) 203, 326, 565, 604, 1072
PpsI GAGTC 5 cut(s) 203, 326, 565, 604, 1072
PscI ACATGT 1 cut(s) 162
PsiI TTATAA 1 cut(s) 741
Psp124BI GAGCTC 1 cut(s) 462
Psp6I CCWGG 1 cut(s) 826
PspGI CCWGG 1 cut(s) 826
PspN4I GGNNCC 3 cut(s) 433, 801, 1138
PspPI GGNCC 1 cut(s) 800
PsrI GAACNNNNNNTAC 4 cut(s) 360, 365, 392, 397
PstNI CAGNNNCTG 1 cut(s) 809
PvuI CGATCG 1 cut(s) 339
RsaI GTAC 3 cut(s) 55, 129, 906
RsaNI GTAC 3 cut(s) 54, 128, 905
RseI CAYNNNNRTG 2 cut(s) 546, 654
SacI GAGCTC 1 cut(s) 462
SaqAI TTAA 4 cut(s) 591, 636, 660, 888
SatI GCNGC 2 cut(s) 512, 864
Sau3AI GATC 6 cut(s) 10, 103, 336, 487, 727, 1225
Sau96I GGNCC 1 cut(s) 800
ScaI AGTACT 1 cut(s) 906
SchI GAGTC 5 cut(s) 204, 326, 565, 605, 1073
ScrFI CCNGG 1 cut(s) 828
SduI GDGCHC 4 cut(s) 144, 162, 186, 462
SfaNI GCATC 1 cut(s) 612
SinI GGWCC 1 cut(s) 800
SmiMI CAYNNNNRTG 2 cut(s) 546, 654
SmlI CTYRAG 1 cut(s) 1061
SmoI CTYRAG 1 cut(s) 1061
Sse9I AATT 9 cut(s) 479, 520, 665, 851, 867, 957, 975, 1055, 1217
SseBI AGGCCT 1 cut(s) 1002
SspMI CTAG 1 cut(s) 1004
SstI GAGCTC 1 cut(s) 462
StuI AGGCCT 1 cut(s) 1002
StyD4I CCNGG 1 cut(s) 826
StyI CCWWGG 2 cut(s) 190, 1003
TaaI ACNGT 2 cut(s) 777, 1123
TaiI ACGT 2 cut(s) 55, 255
TasI AATT 9 cut(s) 479, 520, 665, 851, 867, 957, 975, 1055, 1217
TatI WGTACW 1 cut(s) 904
TfiI GAWTC 4 cut(s) 5, 239, 806, 1031
Tru1I TTAA 4 cut(s) 591, 636, 660, 888
Tru9I TTAA 4 cut(s) 591, 636, 660, 888
TscAI CASTG 3 cut(s) 1083, 1128, 1215
TseI GCWGC 2 cut(s) 511, 863
TspDTI ATGAA 2 cut(s) 540, 770
TspGWI ACGGA 2 cut(s) 7, 385
TspRI CASTG 3 cut(s) 1083, 1128, 1215
Van91I CCANNNNNTGG 1 cut(s) 1249
VneI GTGCAC 1 cut(s) 158
VpaK11BI GGWCC 1 cut(s) 800
XagI CCTNNNNNAGG 1 cut(s) 750
XapI RAATTY 4 cut(s) 479, 851, 957, 1055
XceI RCATGY 3 cut(s) 166, 426, 551
XmaJI CCTAGG 1 cut(s) 1003
XmnI GAANNNNTTC 1 cut(s) 71
XspI CTAG 1 cut(s) 1004
ZraI GACGTC 1 cut(s) 253
ZrmI AGTACT 1 cut(s) 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.