RLG00000017405

Peptidase C26

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
16194847 .. 16196425
1579 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017405

Sequence Viewer

Length: 1293 bp
ATGTATTCTGATCTGTCTGTGATCCTTCCTCGCGTTCTCATTGTCTCTAGACGTACGGTTCGCAAGAACAAGTTCGTAGATTTTGTGGGTGAATATCATCTCGATCTTATAATAAGGTATGGTGCAGTACCAGTAATTGTTCCCCGAGTAAATGGGGTGCATATGTTATTGGAGAGCTTCGAGCCGATTCATGGAGTTTTGCTTTGTGAAGGAGAGGATATTGATCCCTCTCTTTACCAAAGCGGCGGCGACGACGGCGTTTCCAAGGAAGAACTGGAAGAAATCAGGAGGCTTCATGTAAGCGACACGGCCATCGATAAGGAGAAAGATTCAATCGAGCTGAGGCTGGCCAAGCTTTGCCTCGAGAGGAACATACCCTACTTGGGAATATGCAGAGGCTCACAAGTCTTAAATGTTGCATGTGGAGGGACCCTTTACCAGGATATAGAAACGGAGCTCTCTAAAAACTCCAAGATCGATGAGAATAAGGTTCAACATATGAATTACGACGACTACGACGGACACAGACATGAGGTTGAGGTGGTTGACGATACTCCTTTGCACCATTGGTTTAAGGAGGAACATATTAACGAGAGAGGCAAGTTGGAGATTCGGGTGAATAGTTATCACCATCAAGGTGTTAAGAGATTGGCACACCGTTTTCTGCCAATGGCTTTTGCAAGAGATGGTTTGATCGAAGCCTTCTATGATCCGGATGCTTATAATCCCAACCAAGGTAAGTTTATTATGGGACTCCAATTCCATCCCGAAAGAATGAGAATGCCCGATTCTGACCAATTTGATTACCCTGGTTGCCCATCTGCCTATAAGGAATTTGTCAAAGCAGCAGTTGCTTACCAGAAGAAGCTTAATAGCTTAAGCTCCTCATCATCAGTACCGTCACAGTTGCCTTTAAAGCTTGACAGCGCAGTGGAGATAAAGAGAGACAGGATAGTAAGGAGTTTCTCAATTGCCAGACACTTATATACTACTGGTCGTACTATGATGCATTCAATCAAAGAATCAGAACTCGAAGCCGGGGCAGAATTCCTTGAGTCAAACGCAGCGTTGAGTTTACAACAGCAGAATAGATTGAAGCAAATGGGTGCAACAGTGAGGAATTCAGGTTCCTACATAGAGAGACTGAAATTGAATGAGGGGAGAGAAAAACTAGCAAGGAACGTGATGGCGAAAATGTCCGTTGAGCAATTATCTGATCTCATGGCGTTCTACCATATGATGGGACAAATTTGTTCAGAAGTGTTGGACAAAAAGATAAACAGCATGCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

431

Amino Acids

49.16

Weight (kDa)

6.24

Isoelectric Point (pI)

48.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C26 PF07722 27 - 257 4.9e-42 Peptidase C26
GATase PF00117 112 - 262 3.3e-11 Glutamine amidotransferase class-I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 110, 723
AccB7I CCANNNNNTGG 1 cut(s) 1240
AccII CGCG 1 cut(s) 33
AccIII TCCGGA 1 cut(s) 712
AciI CCGC 2 cut(s) 243, 246
AclWI GGATC 3 cut(s) 16, 218, 704
AcoI YGGCCR 2 cut(s) 309, 348
AcsI RAATTY 4 cut(s) 833, 1046, 1120, 1248
AfaI GTAC 4 cut(s) 55, 129, 897, 1000
AfiI CCNNNNNNNGG 5 cut(s) 191, 383, 439, 734, 1240
AflII CTTAAG 1 cut(s) 877
AgsI TTSAA 5 cut(s) 333, 494, 1014, 1096, 1153
AjnI CCWGG 2 cut(s) 438, 808
AloI GAACNNNNNNTCC 2 cut(s) 1111, 1143
AluBI AGCT 8 cut(s) 177, 340, 355, 457, 868, 876, 882, 919
AluI AGCT 8 cut(s) 177, 340, 355, 457, 868, 876, 882, 919
Alw21I GWGCWC 1 cut(s) 459
Alw26I GTCTC 3 cut(s) 49, 939, 1135
AlwI GGATC 3 cut(s) 16, 218, 704
Ama87I CYCGRG 2 cut(s) 144, 362
Aor13HI TCCGGA 1 cut(s) 712
AoxI GGCC 2 cut(s) 309, 348
ApeKI GCWGC 2 cut(s) 845, 1064
ApoI RAATTY 4 cut(s) 833, 1046, 1120, 1248
ArsI GACNNNNNNTTYG 2 cut(s) 42, 74
Asp700I GAANNNNTTC 1 cut(s) 71
AspLEI GCGC 1 cut(s) 929
AspS9I GGNCC 1 cut(s) 429
AsuC2I CCSGG 1 cut(s) 1039
AsuHPI GGTGA 3 cut(s) 101, 620, 628
AvaI CYCGRG 2 cut(s) 144, 362
AvaII GGWCC 1 cut(s) 429
BalI TGGCCA 1 cut(s) 350
BanII GRGCYC 1 cut(s) 459
Bbv12I GWGCWC 1 cut(s) 459
BbvCI CCTCAGC 1 cut(s) 341
BbvI GCAGC 2 cut(s) 857, 1076
BccI CCATC 7 cut(s) 320, 639, 680, 771, 826, 1180, 1234
BceAI ACGGC 2 cut(s) 271, 324
BciT130I CCWGG 2 cut(s) 440, 810
BcnI CCSGG 1 cut(s) 1039
BcoDI GTCTC 3 cut(s) 49, 939, 1135
BfaI CTAG 2 cut(s) 48, 1172
BfrI CTTAAG 1 cut(s) 877
BisI GCNGC 4 cut(s) 244, 247, 846, 1065
BlsI GCNGC 4 cut(s) 245, 248, 847, 1066
Bme1390I CCNGG 3 cut(s) 440, 810, 1039
Bme18I GGWCC 1 cut(s) 429
BmeT110I CYCGRG 2 cut(s) 144, 362
BmgT120I GGNCC 1 cut(s) 429
BmiI GGNNCC 3 cut(s) 430, 431, 1129
BmrFI CCNGG 3 cut(s) 440, 810, 1039
BmsI GCATC 2 cut(s) 706, 996
Bpu10I CCTNAGC 1 cut(s) 341
BpuEI CTTGAG 1 cut(s) 1073
BpuMI CCSGG 1 cut(s) 1039
Bsa29I ATCGAT 2 cut(s) 315, 477
BsaBI GATNNNNATC 1 cut(s) 222
BsaJI CCNNGG 4 cut(s) 264, 733, 808, 1038
BsaWI WCCGGW 1 cut(s) 712
Bsc4I CCNNNNNNNGG 5 cut(s) 191, 383, 439, 734, 1240
Bse1I ACTGG 3 cut(s) 131, 279, 997
Bse8I GATNNNNATC 1 cut(s) 222
BseAI TCCGGA 1 cut(s) 712
BseBI CCWGG 2 cut(s) 440, 810
BseCI ATCGAT 2 cut(s) 315, 477
BseDI CCNNGG 4 cut(s) 264, 733, 808, 1038
BseGI GGATG 2 cut(s) 721, 763
BseJI GATNNNNATC 1 cut(s) 222
BseLI CCNNNNNNNGG 5 cut(s) 191, 383, 439, 734, 1240
BseMII CTCAG 1 cut(s) 332
BseNI ACTGG 3 cut(s) 131, 279, 997
BseRI GAGGAG 1 cut(s) 874
BseXI GCAGC 2 cut(s) 857, 1076
BsgI GTGCAG 1 cut(s) 144
Bsh1236I CGCG 1 cut(s) 33
BshFI GGCC 2 cut(s) 311, 350
BshVI ATCGAT 2 cut(s) 315, 477
BsiHKAI GWGCWC 1 cut(s) 459
BsiHKCI CYCGRG 2 cut(s) 144, 362
BsiSI CCGG 2 cut(s) 713, 1038
BsiWI CGTACG 1 cut(s) 53
BslFI GGGAC 3 cut(s) 442, 765, 1257
BslI CCNNNNNNNGG 5 cut(s) 191, 383, 439, 734, 1240
BsmAI GTCTC 3 cut(s) 49, 939, 1135
BsmFI GGGAC 3 cut(s) 442, 765, 1257
BsmI GAATGC 2 cut(s) 786, 1009
BsnI GGCC 2 cut(s) 311, 350
BsoBI CYCGRG 2 cut(s) 144, 362
Bsp1286I GDGCHC 1 cut(s) 459
Bsp13I TCCGGA 1 cut(s) 712
Bsp143I GATC 8 cut(s) 10, 21, 103, 223, 474, 693, 709, 1216
BspACI CCGC 2 cut(s) 243, 246
BspANI GGCC 2 cut(s) 311, 350
BspCNI CTCAG 1 cut(s) 333
BspDI ATCGAT 2 cut(s) 315, 477
BspEI TCCGGA 1 cut(s) 712
BspFNI CGCG 1 cut(s) 33
BspLI GGNNCC 3 cut(s) 430, 431, 1129
BspPI GGATC 3 cut(s) 16, 218, 704
BspTI CTTAAG 1 cut(s) 877
BsrI ACTGG 3 cut(s) 131, 279, 997
BssECI CCNNGG 4 cut(s) 264, 733, 808, 1038
BssMI GATC 8 cut(s) 10, 21, 103, 223, 474, 693, 709, 1216
BssT1I CCWWGG 2 cut(s) 264, 733
Bst2UI CCWGG 2 cut(s) 440, 810
Bst4CI ACNGT 5 cut(s) 58, 659, 900, 906, 1114
BstAFI CTTAAG 1 cut(s) 877
BstAPI GCANNNNNTGC 1 cut(s) 851
BstC8I GCNNGC 2 cut(s) 348, 1286
BstDEI CTNAG 1 cut(s) 341
BstENI CCTNNNNNAGG 1 cut(s) 437
BstF5I GGATG 2 cut(s) 721, 763
BstFNI CGCG 1 cut(s) 33
BstHHI GCGC 1 cut(s) 929
BstKTI GATC 8 cut(s) 13, 24, 106, 226, 477, 696, 712, 1219
BstMAI GTCTC 3 cut(s) 49, 939, 1135
BstMBI GATC 8 cut(s) 10, 21, 103, 223, 474, 693, 709, 1216
BstMWI GCNNNNNNNGC 4 cut(s) 255, 352, 851, 916
BstNI CCWGG 2 cut(s) 440, 810
BstNSI RCATGY 2 cut(s) 423, 1288
BstSCI CCNGG 3 cut(s) 438, 808, 1037
BstUI CGCG 1 cut(s) 33
BstV1I GCAGC 2 cut(s) 857, 1076
Bsu15I ATCGAT 2 cut(s) 315, 477
BsuRI GGCC 2 cut(s) 311, 350
BsuTUI ATCGAT 2 cut(s) 315, 477
BtsCI GGATG 2 cut(s) 721, 763
BtsI GCAGTG 1 cut(s) 936
BtsIMutI CAGTG 2 cut(s) 936, 1119
Cac8I GCNNGC 2 cut(s) 348, 1286
CfoI GCGC 1 cut(s) 929
Cfr13I GGNCC 1 cut(s) 429
ClaI ATCGAT 2 cut(s) 315, 477
Csp6I GTAC 4 cut(s) 54, 128, 896, 999
CviAII CATG 6 cut(s) 191, 296, 420, 530, 1222, 1285
CviQI GTAC 4 cut(s) 54, 128, 896, 999
DdeI CTNAG 1 cut(s) 341
DpnI GATC 8 cut(s) 12, 23, 105, 225, 476, 695, 711, 1218
DpnII GATC 8 cut(s) 10, 21, 103, 223, 474, 693, 709, 1216
DraI TTTAAA 1 cut(s) 915
EaeI YGGCCR 2 cut(s) 309, 348
Ecl136II GAGCTC 1 cut(s) 457
Eco130I CCWWGG 2 cut(s) 264, 733
Eco24I GRGCYC 1 cut(s) 459
Eco47I GGWCC 1 cut(s) 429
Eco53kI GAGCTC 1 cut(s) 457
Eco88I CYCGRG 2 cut(s) 144, 362
EcoICRI GAGCTC 1 cut(s) 457
EcoNI CCTNNNNNAGG 1 cut(s) 437
EcoO109I RGGNCCY 1 cut(s) 429
EcoRI GAATTC 2 cut(s) 1046, 1120
EcoRII CCWGG 2 cut(s) 438, 808
EcoT14I CCWWGG 2 cut(s) 264, 733
EcoT22I ATGCAT 2 cut(s) 1011, 1290
EcoT38I GRGCYC 1 cut(s) 459
ErhI CCWWGG 2 cut(s) 264, 733
FaeI CATG 6 cut(s) 194, 299, 423, 533, 1225, 1288
FaqI GGGAC 3 cut(s) 442, 765, 1257
FatI CATG 6 cut(s) 190, 295, 419, 529, 1221, 1284
FauNDI CATATG 3 cut(s) 162, 498, 1236
Fnu4HI GCNGC 4 cut(s) 244, 247, 846, 1065
FokI GGATG 2 cut(s) 728, 750
FriOI GRGCYC 1 cut(s) 459
Fsp4HI GCNGC 4 cut(s) 244, 247, 846, 1065
FspBI CTAG 2 cut(s) 48, 1172
GlaI GCGC 1 cut(s) 928
GluI GCNGC 4 cut(s) 244, 247, 846, 1065
HaeIII GGCC 2 cut(s) 311, 350
HapII CCGG 2 cut(s) 713, 1038
HhaI GCGC 1 cut(s) 929
Hin1II CATG 6 cut(s) 194, 299, 423, 533, 1225, 1288
Hin6I GCGC 1 cut(s) 927
HinP1I GCGC 1 cut(s) 927
HincII GTYRAC 1 cut(s) 547
HindII GTYRAC 1 cut(s) 547
HindIII AAGCTT 3 cut(s) 353, 866, 917
HinfI GANTC 7 cut(s) 187, 329, 610, 753, 788, 1022, 1055
HpaII CCGG 2 cut(s) 713, 1038
HphI GGTGA 3 cut(s) 101, 620, 628
Hpy166II GTNNAC 2 cut(s) 547, 1076
Hpy188I TCNGA 5 cut(s) 10, 793, 1027, 1216, 1258
Hpy188III TCNNGA 6 cut(s) 48, 101, 286, 364, 713, 767
Hpy8I GTNNAC 2 cut(s) 547, 1076
Hpy99I CGWCG 4 cut(s) 254, 257, 512, 521
HpyAV CCTTC 3 cut(s) 35, 203, 712
HpyCH4III ACNGT 5 cut(s) 58, 659, 900, 906, 1114
HpyCH4IV ACGT 2 cut(s) 52, 1182
HpyCH4V TGCA 9 cut(s) 125, 160, 393, 419, 562, 680, 1009, 1109, 1288
HpyF10VI GCNNNNNNNGC 4 cut(s) 255, 352, 851, 916
HpyF3I CTNAG 1 cut(s) 341
HpySE526I ACGT 2 cut(s) 52, 1182
Hsp92II CATG 6 cut(s) 194, 299, 423, 533, 1225, 1288
HspAI GCGC 1 cut(s) 927
KflI GGGWCCC 1 cut(s) 429
Kpn2I TCCGGA 1 cut(s) 712
Kzo9I GATC 8 cut(s) 10, 21, 103, 223, 474, 693, 709, 1216
LmnI GCTCC 2 cut(s) 454, 887
Lsp1109I GCAGC 2 cut(s) 857, 1076
LweI GCATC 2 cut(s) 706, 996
MaeI CTAG 2 cut(s) 48, 1172
MaeII ACGT 2 cut(s) 52, 1182
MaeIII GTNAC 1 cut(s) 900
MalI GATC 8 cut(s) 12, 23, 105, 225, 476, 695, 711, 1218
MboI GATC 8 cut(s) 10, 21, 103, 223, 474, 693, 709, 1216
MboII GAAGA 3 cut(s) 281, 290, 874
MfeI CAATTG 1 cut(s) 969
MhlI GDGCHC 1 cut(s) 459
MlsI TGGCCA 1 cut(s) 350
MluNI TGGCCA 1 cut(s) 350
MlyI GAGTC 2 cut(s) 747, 1064
MmeI TCCRAC 2 cut(s) 585, 1245
Mox20I TGGCCA 1 cut(s) 350
Mph1103I ATGCAT 2 cut(s) 1011, 1290
MroI TCCGGA 1 cut(s) 712
MroXI GAANNNNTTC 1 cut(s) 71
MscI TGGCCA 1 cut(s) 350
MseI TTAA 8 cut(s) 410, 573, 588, 642, 870, 878, 914, 1291
MslI CAYNNNNRTG 2 cut(s) 528, 636
Msp20I TGGCCA 1 cut(s) 350
MspCI CTTAAG 1 cut(s) 877
MspI CCGG 2 cut(s) 713, 1038
MspR9I CCNGG 3 cut(s) 440, 810, 1039
MunI CAATTG 1 cut(s) 969
Mva1269I GAATGC 2 cut(s) 786, 1009
MvaI CCWGG 2 cut(s) 440, 810
MvnI CGCG 1 cut(s) 33
MwoI GCNNNNNNNGC 4 cut(s) 255, 352, 851, 916
NciI CCSGG 1 cut(s) 1039
NdeI CATATG 3 cut(s) 162, 498, 1236
NdeII GATC 8 cut(s) 10, 21, 103, 223, 474, 693, 709, 1216
NlaIII CATG 6 cut(s) 194, 299, 423, 533, 1225, 1288
NlaIV GGNNCC 3 cut(s) 430, 431, 1129
NmuCI GTSAC 1 cut(s) 900
NsiI ATGCAT 2 cut(s) 1011, 1290
NspI RCATGY 2 cut(s) 423, 1288
PaeI GCATGC 1 cut(s) 1288
PaeR7I CTCGAG 1 cut(s) 362
PcsI WCGNNNNNNNCGW 1 cut(s) 513
PctI GAATGC 2 cut(s) 786, 1009
PdmI GAANNNNTTC 1 cut(s) 71
PfeI GAWTC 5 cut(s) 187, 329, 610, 788, 1022
Pfl23II CGTACG 1 cut(s) 53
PflMI CCANNNNNTGG 1 cut(s) 1240
PkrI GCNGC 4 cut(s) 245, 248, 847, 1066
PleI GAGTC 2 cut(s) 747, 1063
PpsI GAGTC 2 cut(s) 747, 1063
PpuMI RGGWCCY 1 cut(s) 429
PsiI TTATAA 2 cut(s) 110, 723
Psp124BI GAGCTC 1 cut(s) 459
Psp5II RGGWCCY 1 cut(s) 429
Psp6I CCWGG 2 cut(s) 438, 808
PspGI CCWGG 2 cut(s) 438, 808
PspLI CGTACG 1 cut(s) 53
PspN4I GGNNCC 3 cut(s) 430, 431, 1129
PspPI GGNCC 1 cut(s) 429
PspPPI RGGWCCY 1 cut(s) 429
PsrI GAACNNNNNNTAC 2 cut(s) 362, 394
RsaI GTAC 4 cut(s) 55, 129, 897, 1000
RsaNI GTAC 4 cut(s) 54, 128, 896, 999
RseI CAYNNNNRTG 2 cut(s) 528, 636
SacI GAGCTC 1 cut(s) 459
SaqAI TTAA 8 cut(s) 410, 573, 588, 642, 870, 878, 914, 1291
SatI GCNGC 4 cut(s) 244, 247, 846, 1065
Sau3AI GATC 8 cut(s) 10, 21, 103, 223, 474, 693, 709, 1216
Sau96I GGNCC 1 cut(s) 429
SchI GAGTC 2 cut(s) 747, 1064
ScrFI CCNGG 3 cut(s) 440, 810, 1039
SduI GDGCHC 1 cut(s) 459
SfaNI GCATC 2 cut(s) 706, 996
Sfr274I CTCGAG 1 cut(s) 362
SinI GGWCC 1 cut(s) 429
SlaI CTCGAG 1 cut(s) 362
SmiMI CAYNNNNRTG 2 cut(s) 528, 636
SmlI CTYRAG 3 cut(s) 362, 877, 1052
SmoI CTYRAG 3 cut(s) 362, 877, 1052
SphI GCATGC 1 cut(s) 1288
SsiI CCGC 2 cut(s) 243, 246
SspMI CTAG 2 cut(s) 48, 1172
SstI GAGCTC 1 cut(s) 459
StyD4I CCNGG 3 cut(s) 438, 808, 1037
StyI CCWWGG 2 cut(s) 264, 733
TaaI ACNGT 5 cut(s) 58, 659, 900, 906, 1114
TaiI ACGT 2 cut(s) 55, 1185
TaqI TCGA 8 cut(s) 102, 180, 315, 336, 363, 477, 696, 1032
TauI GCSGC 2 cut(s) 246, 249
TfiI GAWTC 5 cut(s) 187, 329, 610, 788, 1022
Tru1I TTAA 8 cut(s) 410, 573, 588, 642, 870, 878, 914, 1291
Tru9I TTAA 8 cut(s) 410, 573, 588, 642, 870, 878, 914, 1291
TscAI CASTG 2 cut(s) 936, 1119
TseFI GTSAC 1 cut(s) 900
TseI GCWGC 2 cut(s) 845, 1064
Tsp45I GTSAC 1 cut(s) 900
TspDTI ATGAA 3 cut(s) 179, 284, 515
TspGWI ACGGA 3 cut(s) 467, 534, 1189
TspRI CASTG 2 cut(s) 936, 1119
Van91I CCANNNNNTGG 1 cut(s) 1240
Vha464I CTTAAG 1 cut(s) 877
VpaK11BI GGWCC 1 cut(s) 429
XagI CCTNNNNNAGG 1 cut(s) 437
XapI RAATTY 4 cut(s) 833, 1046, 1120, 1248
XbaI TCTAGA 1 cut(s) 47
XceI RCATGY 2 cut(s) 423, 1288
XcmI CCANNNNNNNNNTGG 1 cut(s) 271
XhoI CTCGAG 1 cut(s) 362
XmnI GAANNNNTTC 1 cut(s) 71
XspI CTAG 2 cut(s) 48, 1172
Zsp2I ATGCAT 2 cut(s) 1011, 1290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.