Prupe.1G056700_v2.0.a1

Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
4049048 .. 4049797
750 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G056700.1

Sequence Viewer

Length: 750 bp
ATGTTGAAGCAATCACCATTTTGTTCCATTTTCTTCACTGTGCTAATTGCCTCAGTGCATGTACTGCTGGTCAAGGCAGCAGTTGACCCAGTCAAAGCCAGTGGGCATGAGCCAATTCTTGAGATGTACATGCATGACATTCTTGGAGGCAGCAGCCCTACAGCTAGGCCAATCACTGGCCTACTTGGCAACATATATGGAGGGCAAGTGCCCTTTGCAAGGCCAATAGGGTTCCTTCCCCCACAAGGTGGGGTGGCCATCCCCAATGCCAATGGTGCCCTCCCAACTGTCAATGGCCTCAATGGCATTCCACTTGGCACTGGCTTAGCTGGCACAACATTTTCAGGAAAACCAAGTGGCCAGGCCCAAACCCAGTTGGGCCCTGATGGGCTGGGCCTGGGCTTTGGAACCCTCACAGTCATTGATGATATTTTGACCACAGCACCTGAGTTGGGCTCACAGACAATTGGGAAGGCTCAAGGAGTTTATGTGGCAAGTTCAGCTGATGGGTCCTCACAGATGATGGCTTTCACAGCCATGATTGAAGGTGGTGAATATGGTGACACCTTAAACTTCTATGGCATATTCAAAATTGGAAGCCCAATGTCACATTTGTCAGTGACAGGAGGCACTGGAAAATTCAAGTCTGCAAGTGGGTTTGCTGAGGTTAGGTCACTTATACCTCCTGGTCAACATGTCACTGATGGTGCTGAGACATTGCTGAGGATCATTGTGCATCTAAGCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

250

Amino Acids

25.5

Weight (kDa)

6.03

Isoelectric Point (pI)

37.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 275
AccB7I CCANNNNNTGG 2 cut(s) 176, 248
AclWI GGATC 1 cut(s) 734
AcoI YGGCCR 2 cut(s) 255, 358
AcsI RAATTY 1 cut(s) 638
AdeI CACNNNGTG 1 cut(s) 248
AfaI GTAC 2 cut(s) 63, 128
AfiI CCNNNNNNNGG 5 cut(s) 176, 219, 245, 248, 452
AflIII ACRYGT 1 cut(s) 694
AgsI TTSAA 4 cut(s) 7, 545, 589, 643
AjnI CCWGG 3 cut(s) 360, 396, 685
AluBI AGCT 4 cut(s) 164, 329, 503, 744
AluI AGCT 4 cut(s) 164, 329, 503, 744
Alw26I GTCTC 1 cut(s) 707
AlwI GGATC 1 cut(s) 734
AlwNI CAGNNNCTG 1 cut(s) 446
AoxI GGCC 9 cut(s) 167, 178, 221, 255, 295, 358, 363, 379, 394
ApaI GGGCCC 1 cut(s) 383
ApeKI GCWGC 3 cut(s) 77, 150, 153
ApoI RAATTY 1 cut(s) 638
AspS9I GGNCC 5 cut(s) 364, 379, 380, 394, 510
AsuHPI GGTGA 3 cut(s) 6, 563, 572
AvaII GGWCC 1 cut(s) 510
BaeGI GKGCMC 3 cut(s) 213, 280, 383
BalI TGGCCA 2 cut(s) 257, 360
BanI GGYRCC 1 cut(s) 275
BanII GRGCYC 2 cut(s) 383, 458
BbvCI CCTCAGC 2 cut(s) 663, 722
BbvI GCAGC 3 cut(s) 89, 162, 165
BccI CCATC 5 cut(s) 266, 380, 500, 517, 698
BciT130I CCWGG 3 cut(s) 362, 398, 687
BcoDI GTCTC 1 cut(s) 707
BfaI CTAG 1 cut(s) 165
BfmI CTRYAG 1 cut(s) 159
BglI GCCNNNNNGGC 2 cut(s) 186, 303
BisI GCNGC 3 cut(s) 78, 151, 154
BlpI GCTNAGC 1 cut(s) 325
BlsI GCNGC 3 cut(s) 79, 152, 155
Bme1390I CCNGG 3 cut(s) 362, 398, 687
Bme18I GGWCC 1 cut(s) 510
BmgT120I GGNCC 5 cut(s) 364, 379, 380, 394, 510
BmiI GGNNCC 5 cut(s) 233, 277, 381, 409, 511
BmrFI CCNGG 3 cut(s) 362, 398, 687
BmrI ACTGGG 2 cut(s) 83, 367
BmsI GCATC 1 cut(s) 745
BmuI ACTGGG 2 cut(s) 83, 367
BplI GAGNNNNNCTC 2 cut(s) 440, 472
Bpu10I CCTNAGC 2 cut(s) 663, 722
Bpu1102I GCTNAGC 1 cut(s) 325
BpuEI CTTGAG 2 cut(s) 140, 462
BsaJI CCNNGG 1 cut(s) 397
BsaXI ACNNNNNCTCC 4 cut(s) 192, 222, 474, 504
Bsc4I CCNNNNNNNGG 5 cut(s) 176, 219, 245, 248, 452
Bse1I ACTGG 6 cut(s) 89, 99, 181, 325, 373, 637
Bse3DI GCAATG 1 cut(s) 716
BseBI CCWGG 3 cut(s) 362, 398, 687
BseDI CCNNGG 1 cut(s) 397
BseGI GGATG 1 cut(s) 258
BseLI CCNNNNNNNGG 5 cut(s) 176, 219, 245, 248, 452
BseMI GCAATG 1 cut(s) 716
BseMII CTCAG 5 cut(s) 66, 438, 654, 702, 713
BseNI ACTGG 6 cut(s) 89, 99, 181, 325, 373, 637
BseSI GKGCMC 3 cut(s) 213, 280, 383
BseXI GCAGC 3 cut(s) 89, 162, 165
BseYI CCCAGC 1 cut(s) 391
BshFI GGCC 9 cut(s) 169, 180, 223, 257, 297, 360, 365, 381, 396
BshNI GGYRCC 1 cut(s) 275
BslI CCNNNNNNNGG 5 cut(s) 176, 219, 245, 248, 452
BsmAI GTCTC 1 cut(s) 707
BsmI GAATGC 1 cut(s) 306
BsnI GGCC 9 cut(s) 169, 180, 223, 257, 297, 360, 365, 381, 396
Bsp120I GGGCCC 1 cut(s) 379
Bsp1286I GDGCHC 4 cut(s) 213, 280, 383, 458
Bsp1407I TGTACA 1 cut(s) 126
Bsp143I GATC 1 cut(s) 726
Bsp1720I GCTNAGC 1 cut(s) 325
BspANI GGCC 9 cut(s) 169, 180, 223, 257, 297, 360, 365, 381, 396
BspCNI CTCAG 5 cut(s) 65, 439, 655, 703, 714
BspLI GGNNCC 5 cut(s) 233, 277, 381, 409, 511
BspPI GGATC 1 cut(s) 734
BspT107I GGYRCC 1 cut(s) 275
BsrDI GCAATG 1 cut(s) 716
BsrGI TGTACA 1 cut(s) 126
BsrI ACTGG 6 cut(s) 89, 99, 181, 325, 373, 637
BssECI CCNNGG 1 cut(s) 397
BssMI GATC 1 cut(s) 726
Bst2UI CCWGG 3 cut(s) 362, 398, 687
Bst4CI ACNGT 3 cut(s) 40, 289, 418
BstAPI GCANNNNNTGC 1 cut(s) 64
BstAUI TGTACA 1 cut(s) 126
BstC8I GCNNGC 1 cut(s) 331
BstDEI CTNAG 7 cut(s) 52, 325, 447, 663, 711, 722, 740
BstENI CCTNNNNNAGG 1 cut(s) 217
BstF5I GGATG 1 cut(s) 258
BstKTI GATC 1 cut(s) 729
BstMAI GTCTC 1 cut(s) 707
BstMBI GATC 1 cut(s) 726
BstMWI GCNNNNNNNGC 7 cut(s) 64, 186, 275, 303, 330, 500, 533
BstNI CCWGG 3 cut(s) 362, 398, 687
BstNSI RCATGY 3 cut(s) 62, 133, 698
BstSCI CCNGG 3 cut(s) 360, 396, 685
BstSFI CTRYAG 1 cut(s) 159
BstSLI GKGCMC 3 cut(s) 213, 280, 383
BstV1I GCAGC 3 cut(s) 89, 162, 165
BsuRI GGCC 9 cut(s) 169, 180, 223, 257, 297, 360, 365, 381, 396
BtsCI GGATG 1 cut(s) 258
BtsIMutI CAGTG 8 cut(s) 36, 60, 106, 174, 318, 624, 630, 699
Cac8I GCNNGC 1 cut(s) 331
CaiI CAGNNNCTG 1 cut(s) 446
Cfr13I GGNCC 5 cut(s) 364, 379, 380, 394, 510
Csp6I GTAC 2 cut(s) 62, 127
CspCI CAANNNNNGTGG 2 cut(s) 82, 117
CviAII CATG 6 cut(s) 59, 107, 130, 134, 538, 695
CviQI GTAC 2 cut(s) 62, 127
DdeI CTNAG 7 cut(s) 52, 325, 447, 663, 711, 722, 740
DpnI GATC 1 cut(s) 728
DpnII GATC 1 cut(s) 726
DraIII CACNNNGTG 1 cut(s) 248
EaeI YGGCCR 2 cut(s) 255, 358
Eco24I GRGCYC 2 cut(s) 383, 458
Eco47I GGWCC 1 cut(s) 510
EcoNI CCTNNNNNAGG 1 cut(s) 217
EcoO109I RGGNCCY 2 cut(s) 380, 510
EcoRII CCWGG 3 cut(s) 360, 396, 685
EcoT22I ATGCAT 1 cut(s) 135
EcoT38I GRGCYC 2 cut(s) 383, 458
FaeI CATG 6 cut(s) 62, 110, 133, 137, 541, 698
FatI CATG 6 cut(s) 58, 106, 129, 133, 537, 694
Fnu4HI GCNGC 3 cut(s) 78, 151, 154
FokI GGATG 1 cut(s) 245
FriOI GRGCYC 2 cut(s) 383, 458
Fsp4HI GCNGC 3 cut(s) 78, 151, 154
FspBI CTAG 1 cut(s) 165
GluI GCNGC 3 cut(s) 78, 151, 154
GsaI CCCAGC 1 cut(s) 395
HaeIII GGCC 9 cut(s) 169, 180, 223, 257, 297, 360, 365, 381, 396
Hin1II CATG 6 cut(s) 62, 110, 133, 137, 541, 698
HincII GTYRAC 2 cut(s) 85, 692
HindII GTYRAC 2 cut(s) 85, 692
HphI GGTGA 3 cut(s) 6, 563, 572
Hpy166II GTNNAC 2 cut(s) 85, 692
Hpy188III TCNNGA 2 cut(s) 119, 345
Hpy8I GTNNAC 2 cut(s) 85, 692
HpyAV CCTTC 3 cut(s) 245, 466, 539
HpyCH4III ACNGT 3 cut(s) 40, 289, 418
HpyCH4V TGCA 5 cut(s) 58, 133, 218, 650, 736
HpyF10VI GCNNNNNNNGC 7 cut(s) 64, 186, 275, 303, 330, 500, 533
HpyF3I CTNAG 7 cut(s) 52, 325, 447, 663, 711, 722, 740
Hsp92II CATG 6 cut(s) 62, 110, 133, 137, 541, 698
Kzo9I GATC 1 cut(s) 726
Lsp1109I GCAGC 3 cut(s) 89, 162, 165
LweI GCATC 1 cut(s) 745
MaeI CTAG 1 cut(s) 165
MaeIII GTNAC 5 cut(s) 560, 606, 619, 672, 697
MalI GATC 1 cut(s) 728
MboI GATC 1 cut(s) 726
MboII GAAGA 1 cut(s) 25
MfeI CAATTG 1 cut(s) 465
MhlI GDGCHC 4 cut(s) 213, 280, 383, 458
MlsI TGGCCA 2 cut(s) 257, 360
MluCI AATT 5 cut(s) 45, 114, 465, 591, 638
MluNI TGGCCA 2 cut(s) 257, 360
Mox20I TGGCCA 2 cut(s) 257, 360
Mph1103I ATGCAT 1 cut(s) 135
MscI TGGCCA 2 cut(s) 257, 360
MseI TTAA 1 cut(s) 569
MslI CAYNNNNRTG 1 cut(s) 536
Msp20I TGGCCA 2 cut(s) 257, 360
MspA1I CMGCKG 1 cut(s) 503
MspR9I CCNGG 3 cut(s) 362, 398, 687
MunI CAATTG 1 cut(s) 465
Mva1269I GAATGC 1 cut(s) 306
MvaI CCWGG 3 cut(s) 362, 398, 687
MwoI GCNNNNNNNGC 7 cut(s) 64, 186, 275, 303, 330, 500, 533
NdeII GATC 1 cut(s) 726
NlaIII CATG 6 cut(s) 62, 110, 133, 137, 541, 698
NlaIV GGNNCC 5 cut(s) 233, 277, 381, 409, 511
NmuCI GTSAC 5 cut(s) 560, 606, 619, 672, 697
NsiI ATGCAT 1 cut(s) 135
NspI RCATGY 3 cut(s) 62, 133, 698
PciI ACATGT 1 cut(s) 694
PctI GAATGC 1 cut(s) 306
PflFI GACNNNGTC 1 cut(s) 89
PflMI CCANNNNNTGG 2 cut(s) 176, 248
PkrI GCNGC 3 cut(s) 79, 152, 155
PpuMI RGGWCCY 1 cut(s) 510
PscI ACATGT 1 cut(s) 694
Psp5II RGGWCCY 1 cut(s) 510
Psp6I CCWGG 3 cut(s) 360, 396, 685
PspFI CCCAGC 1 cut(s) 391
PspGI CCWGG 3 cut(s) 360, 396, 685
PspN4I GGNNCC 5 cut(s) 233, 277, 381, 409, 511
PspOMI GGGCCC 1 cut(s) 379
PspPI GGNCC 5 cut(s) 364, 379, 380, 394, 510
PspPPI RGGWCCY 1 cut(s) 510
PstNI CAGNNNCTG 1 cut(s) 446
PsyI GACNNNGTC 1 cut(s) 89
PvuII CAGCTG 1 cut(s) 503
RsaI GTAC 2 cut(s) 63, 128
RsaNI GTAC 2 cut(s) 62, 127
RseI CAYNNNNRTG 1 cut(s) 536
SaqAI TTAA 1 cut(s) 569
SatI GCNGC 3 cut(s) 78, 151, 154
Sau3AI GATC 1 cut(s) 726
Sau96I GGNCC 5 cut(s) 364, 379, 380, 394, 510
ScrFI CCNGG 3 cut(s) 362, 398, 687
SduI GDGCHC 4 cut(s) 213, 280, 383, 458
SfaNI GCATC 1 cut(s) 745
SfcI CTRYAG 1 cut(s) 159
SinI GGWCC 1 cut(s) 510
SmiMI CAYNNNNRTG 1 cut(s) 536
SmlI CTYRAG 2 cut(s) 119, 477
SmoI CTYRAG 2 cut(s) 119, 477
Sse9I AATT 5 cut(s) 45, 114, 465, 591, 638
SspMI CTAG 1 cut(s) 165
StyD4I CCNGG 3 cut(s) 360, 396, 685
TaaI ACNGT 3 cut(s) 40, 289, 418
TasI AATT 5 cut(s) 45, 114, 465, 591, 638
TatI WGTACW 2 cut(s) 61, 126
Tru1I TTAA 1 cut(s) 569
Tru9I TTAA 1 cut(s) 569
TscAI CASTG 8 cut(s) 43, 60, 106, 181, 325, 624, 637, 706
TseFI GTSAC 5 cut(s) 560, 606, 619, 672, 697
TseI GCWGC 3 cut(s) 77, 150, 153
Tsp45I GTSAC 5 cut(s) 560, 606, 619, 672, 697
TspRI CASTG 8 cut(s) 43, 60, 106, 181, 325, 624, 637, 706
Tth111I GACNNNGTC 1 cut(s) 89
Van91I CCANNNNNTGG 2 cut(s) 176, 248
VpaK11BI GGWCC 1 cut(s) 510
XagI CCTNNNNNAGG 1 cut(s) 217
XapI RAATTY 1 cut(s) 638
XceI RCATGY 3 cut(s) 62, 133, 698
XspI CTAG 1 cut(s) 165
Zsp2I ATGCAT 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.