Prupe.1G133900_v2.0.a1

Eukaryotic translation initiation factor 2 subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
10581093 .. 10584732
3640 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G133900.2

Sequence Viewer

Length: 1395 bp
ATGTCGAGGAAGGGTTTGATGGAGCAAGACCTGAGTAAACTGGATGTAACAAAGTTACATCCACTGTCGCCTGAAGTTATATCTCGCCAGGCGACTATCAATATTGGTACTATAGGTCATGTGGCTCATGGAAAGTCAACAGTTGTAAAAGCAATATCTGGTGTTCAGACTGTTCGTTTTAAAAATGAGCTGGAGCGCAACATTACTATCAAGCTTGGATATGCCAATGCAAAAATATACATGTGTGAAGATGAGCGGTGCCCTCGACCTATGAGCTACAAGGCATATGGAAGTGGAAAGGAAGACACTCCTCTCTGTGATGTTCCTGGATTTGAGAACTGCAGGATGAAACTGTTGAGACACGTATCTTTTGTAGATTGCCCGGGTCACGATATTCTTATGGCTACTATGCTTAATGGTGCCGCCATTATGGATGGAGCCTTACTTCTCATAGCTGCTAACGAAAGCTGTCCCCAACCACAAACTTCTGAGCATCTGGCTGCTGTTGAAATTATGCGTCTGCAACATATTATTATCCTTCAAAATAAAGTTGACCTGATTCAGGAGAATGTGGCCATCAATCAACATGAGGCAATCCGGAAGTTTATTCAGGGAACTGTAGCTGATAATGCACCAGTGGTCCCAATTTCTGCTCAGTTGAAGTATAATATTGATGTTGTTTGTGAGTACATCGTCAAAAAGATCCCCATTCCAGAAAGGAACTTTATCTCACCTCCCAATATGATTGTTATCCGTTCTTTTGATGTCAATAAACCTGGGTTTGAGGTCGATGAGATAAGAGGTGGAGTGGCTGGTGGAAGCATCCTCAGGGGTGTCTTGAAAGTGAACCAATACATCGAGGTTCGTCCTGGGATTGTTGTTAAGGACGAGAGTGGAAACATAAAATGCACACCAATATATTCTAGAATAGTTTCATTGTATGCTGAGCAAAATGAGTTGCAATTTGCGGTTCCAGGAGGTCTCATTGGCGTTGGAACGACCATGGATCCTACTTTGACACGTGCTGATAGGCTAGTGGGTCAAGTACTTGGTGAAGTTGGATCTCTCCCTGAAGTATTTGTTGAGCTTGAGGTGAACTTCTTCCTGTTGAGAAGGCTTCTAGGGGTCAGGACAAAGGGATCGGAGAAGCAAGGAAAGGTCTCAAAGCTGGCCAAGGGTGAGATCCTGATGTTGAATATAGGATCCATGTCTACAGGGGCTAAGGTTATTGCTGTAAGGAATGATTTAGCAAAGCTGCAACTCACCTCTCCAGTGTGCACCAGCAGAGGAGAGAAAATTGCACTCAGTCGGCGAGTTGAGAAGCATTGGCGTCTTATTGGGTGGGGCACGATTCAAGCTGGAACAACCCTTGATGTCCCACCCTCCCCAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

465

Amino Acids

50.85

Weight (kDa)

8.92

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 258, 419
AccBSI CCGCTC 1 cut(s) 256
AccI GTMKAC 1 cut(s) 1211
AccIII TCCGGA 1 cut(s) 597
AciI CCGC 3 cut(s) 256, 423, 968
AclWI GGATC 8 cut(s) 697, 1001, 1014, 1069, 1147, 1177, 1197, 1210
AcoI YGGCCR 2 cut(s) 573, 1170
AcuI CTGAAG 2 cut(s) 93, 1092
AcvI CACGTG 1 cut(s) 1022
AcyI GRCGYC 1 cut(s) 1330
AfaI GTAC 3 cut(s) 109, 689, 1047
AfiI CCNNNNNNNGG 1 cut(s) 562
AflIII ACRYGT 3 cut(s) 240, 361, 1019
AgsI TTSAA 6 cut(s) 509, 542, 661, 841, 1195, 1355
AjnI CCWGG 5 cut(s) 87, 325, 775, 868, 973
Alw21I GWGCWC 1 cut(s) 1280
Alw26I GTCTC 3 cut(s) 352, 986, 1165
Alw44I GTGCAC 1 cut(s) 1276
AlwI GGATC 8 cut(s) 697, 1001, 1014, 1069, 1147, 1177, 1197, 1210
Ama87I CYCGRG 1 cut(s) 382
Aor13HI TCCGGA 1 cut(s) 597
AoxI GGCC 2 cut(s) 573, 1170
ApaLI GTGCAC 1 cut(s) 1276
ApeKI GCWGC 3 cut(s) 455, 500, 1255
Asp700I GAANNNNTTC 2 cut(s) 931, 1100
AspLEI GCGC 1 cut(s) 198
AspS9I GGNCC 1 cut(s) 640
AsuC2I CCSGG 2 cut(s) 383, 384
AsuHPI GGTGA 5 cut(s) 723, 1064, 1105, 1190, 1255
AvaI CYCGRG 1 cut(s) 382
AvaII GGWCC 1 cut(s) 640
AxyI CCTNAGG 1 cut(s) 827
BaeGI GKGCMC 3 cut(s) 263, 1280, 1349
BalI TGGCCA 2 cut(s) 575, 1172
BamHI GGATCC 2 cut(s) 1006, 1202
BanI GGYRCC 2 cut(s) 258, 419
BbrPI CACGTG 1 cut(s) 1022
BbsI GAAGAC 1 cut(s) 309
Bbv12I GWGCWC 1 cut(s) 1280
BbvI GCAGC 3 cut(s) 442, 487, 1242
BccI CCATC 3 cut(s) 13, 428, 584
BciT130I CCWGG 5 cut(s) 89, 327, 777, 870, 975
BcnI CCSGG 2 cut(s) 383, 384
BcoDI GTCTC 3 cut(s) 352, 986, 1165
BfaI CTAG 3 cut(s) 924, 1034, 1121
BfmI CTRYAG 4 cut(s) 111, 340, 618, 1212
BisI GCNGC 4 cut(s) 423, 456, 501, 1256
BlpI GCTNAGC 1 cut(s) 945
BlsI GCNGC 4 cut(s) 424, 457, 502, 1257
BmcAI AGTACT 1 cut(s) 1047
Bme1390I CCNGG 7 cut(s) 89, 327, 383, 384, 777, 870, 975
Bme18I GGWCC 1 cut(s) 640
BmeT110I CYCGRG 1 cut(s) 382
BmgT120I GGNCC 1 cut(s) 640
BmiI GGNNCC 7 cut(s) 260, 421, 439, 642, 972, 1008, 1204
BmrFI CCNGG 7 cut(s) 89, 327, 383, 384, 777, 870, 975
BmsI GCATC 2 cut(s) 502, 831
BpiI GAAGAC 1 cut(s) 309
BpmI CTGGAG 2 cut(s) 212, 1254
Bpu10I CCTNAGC 1 cut(s) 1221
Bpu1102I GCTNAGC 1 cut(s) 945
BpuEI CTTGAG 1 cut(s) 1109
BpuMI CCSGG 2 cut(s) 383, 384
BsaAI YACGTR 2 cut(s) 364, 1022
BsaBI GATNNNNATC 1 cut(s) 749
BsaHI GRCGYC 1 cut(s) 1330
BsaI GGTCTC 2 cut(s) 986, 1165
BsaJI CCNNGG 5 cut(s) 382, 776, 869, 1002, 1173
BsaWI WCCGGW 1 cut(s) 597
Bsc4I CCNNNNNNNGG 1 cut(s) 562
Bse1I ACTGG 3 cut(s) 45, 635, 1271
Bse21I CCTNAGG 1 cut(s) 827
Bse8I GATNNNNATC 1 cut(s) 749
BseAI TCCGGA 1 cut(s) 597
BseBI CCWGG 5 cut(s) 89, 327, 777, 870, 975
BseDI CCNNGG 5 cut(s) 382, 776, 869, 1002, 1173
BseGI GGATG 5 cut(s) 49, 58, 351, 439, 822
BseJI GATNNNNATC 1 cut(s) 749
BseLI CCNNNNNNNGG 1 cut(s) 562
BseMII CTCAG 6 cut(s) 23, 480, 668, 841, 936, 1318
BseNI ACTGG 3 cut(s) 45, 635, 1271
BseRI GAGGAG 2 cut(s) 300, 1302
BseSI GKGCMC 3 cut(s) 263, 1280, 1349
BseXI GCAGC 3 cut(s) 442, 487, 1242
BshFI GGCC 2 cut(s) 575, 1172
BshNI GGYRCC 2 cut(s) 258, 419
BsiHKAI GWGCWC 1 cut(s) 1280
BsiHKCI CYCGRG 1 cut(s) 382
BsiSI CCGG 2 cut(s) 383, 598
BslFI GGGAC 3 cut(s) 456, 626, 1361
BslI CCNNNNNNNGG 1 cut(s) 562
BsmAI GTCTC 3 cut(s) 352, 986, 1165
BsmFI GGGAC 3 cut(s) 456, 626, 1361
BsnI GGCC 2 cut(s) 575, 1172
Bso31I GGTCTC 2 cut(s) 986, 1165
BsoBI CYCGRG 1 cut(s) 382
Bsp1286I GDGCHC 3 cut(s) 263, 1280, 1349
Bsp13I TCCGGA 1 cut(s) 597
Bsp143I GATC 6 cut(s) 702, 1006, 1061, 1139, 1182, 1202
Bsp1720I GCTNAGC 1 cut(s) 945
Bsp19I CCATGG 1 cut(s) 1002
BspACI CCGC 3 cut(s) 256, 423, 968
BspANI GGCC 2 cut(s) 575, 1172
BspCNI CTCAG 6 cut(s) 24, 481, 667, 840, 937, 1317
BspEI TCCGGA 1 cut(s) 597
BspLI GGNNCC 7 cut(s) 260, 421, 439, 642, 972, 1008, 1204
BspMAI CTGCAG 1 cut(s) 344
BspPI GGATC 8 cut(s) 697, 1001, 1014, 1069, 1147, 1177, 1197, 1210
BspT107I GGYRCC 2 cut(s) 258, 419
BspTNI GGTCTC 2 cut(s) 986, 1165
BsrBI CCGCTC 1 cut(s) 256
BsrI ACTGG 3 cut(s) 45, 635, 1271
BssECI CCNNGG 5 cut(s) 382, 776, 869, 1002, 1173
BssMI GATC 6 cut(s) 702, 1006, 1061, 1139, 1182, 1202
BssNI GRCGYC 1 cut(s) 1330
BssT1I CCWWGG 2 cut(s) 1002, 1173
Bst2UI CCWGG 5 cut(s) 89, 327, 777, 870, 975
Bst4CI ACNGT 5 cut(s) 66, 142, 172, 354, 619
BstACI GRCGYC 1 cut(s) 1330
BstBAI YACGTR 2 cut(s) 364, 1022
BstC8I GCNNGC 1 cut(s) 1170
BstDEI CTNAG 7 cut(s) 32, 489, 654, 827, 945, 1221, 1304
BstDSI CCRYGG 1 cut(s) 1002
BstENI CCTNNNNNAGG 1 cut(s) 560
BstF5I GGATG 5 cut(s) 49, 58, 351, 439, 822
BstHHI GCGC 1 cut(s) 198
BstKTI GATC 6 cut(s) 705, 1009, 1064, 1142, 1185, 1205
BstMAI GTCTC 3 cut(s) 352, 986, 1165
BstMBI GATC 6 cut(s) 702, 1006, 1061, 1139, 1182, 1202
BstMWI GCNNNNNNNGC 1 cut(s) 629
BstNI CCWGG 5 cut(s) 89, 327, 777, 870, 975
BstNSI RCATGY 1 cut(s) 244
BstSCI CCNGG 7 cut(s) 87, 325, 381, 382, 775, 868, 973
BstSFI CTRYAG 4 cut(s) 111, 340, 618, 1212
BstSLI GKGCMC 3 cut(s) 263, 1280, 1349
BstV1I GCAGC 3 cut(s) 442, 487, 1242
BstV2I GAAGAC 1 cut(s) 309
BstX2I RGATCY 5 cut(s) 702, 1006, 1061, 1182, 1202
BstYI RGATCY 5 cut(s) 702, 1006, 1061, 1182, 1202
Bsu36I CCTNAGG 1 cut(s) 827
BsuRI GGCC 2 cut(s) 575, 1172
BtgI CCRYGG 1 cut(s) 1002
BtsCI GGATG 5 cut(s) 49, 58, 351, 439, 822
BtsIMutI CAGTG 3 cut(s) 62, 642, 1278
Cac8I GCNNGC 1 cut(s) 1170
CfoI GCGC 1 cut(s) 198
Cfr13I GGNCC 1 cut(s) 640
Cfr9I CCCGGG 1 cut(s) 382
CseI GACGC 2 cut(s) 506, 1319
Csp6I GTAC 3 cut(s) 108, 688, 1046
CviAII CATG 6 cut(s) 119, 128, 241, 587, 1003, 1207
CviQI GTAC 3 cut(s) 108, 688, 1046
DdeI CTNAG 7 cut(s) 32, 489, 654, 827, 945, 1221, 1304
DpnI GATC 6 cut(s) 704, 1008, 1063, 1141, 1184, 1204
DpnII GATC 6 cut(s) 702, 1006, 1061, 1139, 1182, 1202
DraI TTTAAA 1 cut(s) 181
EaeI YGGCCR 2 cut(s) 573, 1170
Eco130I CCWWGG 2 cut(s) 1002, 1173
Eco31I GGTCTC 2 cut(s) 986, 1165
Eco47I GGWCC 1 cut(s) 640
Eco57I CTGAAG 2 cut(s) 93, 1092
Eco72I CACGTG 1 cut(s) 1022
Eco81I CCTNAGG 1 cut(s) 827
Eco88I CYCGRG 1 cut(s) 382
EcoNI CCTNNNNNAGG 1 cut(s) 560
EcoRII CCWGG 5 cut(s) 87, 325, 775, 868, 973
EcoT14I CCWWGG 2 cut(s) 1002, 1173
ErhI CCWWGG 2 cut(s) 1002, 1173
FaeI CATG 6 cut(s) 122, 131, 244, 590, 1006, 1210
FaqI GGGAC 3 cut(s) 456, 626, 1361
FatI CATG 6 cut(s) 118, 127, 240, 586, 1002, 1206
FauNDI CATATG 1 cut(s) 286
FblI GTMKAC 1 cut(s) 1211
Fnu4HI GCNGC 4 cut(s) 423, 456, 501, 1256
FokI GGATG 5 cut(s) 45, 56, 358, 446, 809
Fsp4HI GCNGC 4 cut(s) 423, 456, 501, 1256
FspBI CTAG 3 cut(s) 924, 1034, 1121
GlaI GCGC 1 cut(s) 197
GluI GCNGC 4 cut(s) 423, 456, 501, 1256
GsuI CTGGAG 2 cut(s) 212, 1254
HaeIII GGCC 2 cut(s) 575, 1172
HapII CCGG 2 cut(s) 383, 598
HgaI GACGC 2 cut(s) 506, 1319
HhaI GCGC 1 cut(s) 198
Hin1I GRCGYC 1 cut(s) 1330
Hin1II CATG 6 cut(s) 122, 131, 244, 590, 1006, 1210
Hin6I GCGC 1 cut(s) 196
HinP1I GCGC 1 cut(s) 196
HincII GTYRAC 2 cut(s) 138, 553
HindII GTYRAC 2 cut(s) 138, 553
HindIII AAGCTT 1 cut(s) 212
HinfI GANTC 2 cut(s) 559, 1351
HpaII CCGG 2 cut(s) 383, 598
HphI GGTGA 5 cut(s) 723, 1064, 1105, 1190, 1255
Hpy166II GTNNAC 7 cut(s) 38, 138, 553, 847, 1096, 1212, 1278
Hpy188I TCNGA 3 cut(s) 168, 490, 1144
Hpy188III TCNNGA 8 cut(s) 389, 563, 598, 713, 838, 924, 1129, 1186
Hpy8I GTNNAC 7 cut(s) 38, 138, 553, 847, 1096, 1212, 1278
HpyAV CCTTC 3 cut(s) 4, 548, 1107
HpyCH4III ACNGT 5 cut(s) 66, 142, 172, 354, 619
HpyCH4IV ACGT 2 cut(s) 363, 1021
HpyCH4V TGCA 9 cut(s) 230, 342, 523, 632, 909, 961, 1258, 1278, 1301
HpyF10VI GCNNNNNNNGC 1 cut(s) 629
HpyF3I CTNAG 7 cut(s) 32, 489, 654, 827, 945, 1221, 1304
HpySE526I ACGT 2 cut(s) 363, 1021
Hsp92I GRCGYC 1 cut(s) 1330
Hsp92II CATG 6 cut(s) 122, 131, 244, 590, 1006, 1210
HspAI GCGC 1 cut(s) 196
Kpn2I TCCGGA 1 cut(s) 597
Kzo9I GATC 6 cut(s) 702, 1006, 1061, 1139, 1182, 1202
LmnI GCTCC 3 cut(s) 22, 193, 437
Lsp1109I GCAGC 3 cut(s) 442, 487, 1242
LweI GCATC 2 cut(s) 502, 831
MaeI CTAG 3 cut(s) 924, 1034, 1121
MaeII ACGT 2 cut(s) 363, 1021
MaeIII GTNAC 3 cut(s) 46, 54, 386
MalI GATC 6 cut(s) 704, 1008, 1063, 1141, 1184, 1204
MbiI CCGCTC 1 cut(s) 256
MboI GATC 6 cut(s) 702, 1006, 1061, 1139, 1182, 1202
MboII GAAGA 3 cut(s) 260, 314, 1093
MflI RGATCY 5 cut(s) 702, 1006, 1061, 1182, 1202
MhlI GDGCHC 3 cut(s) 263, 1280, 1349
MlsI TGGCCA 2 cut(s) 575, 1172
MluCI AATT 5 cut(s) 510, 645, 962, 1296, 1389
MluNI TGGCCA 2 cut(s) 575, 1172
MmeI TCCRAC 2 cut(s) 973, 1039
Mox20I TGGCCA 2 cut(s) 575, 1172
MroI TCCGGA 1 cut(s) 597
MroXI GAANNNNTTC 2 cut(s) 931, 1100
MscI TGGCCA 2 cut(s) 575, 1172
MseI TTAA 3 cut(s) 180, 414, 882
Msp20I TGGCCA 2 cut(s) 575, 1172
MspI CCGG 2 cut(s) 383, 598
MspR9I CCNGG 7 cut(s) 89, 327, 383, 384, 777, 870, 975
MvaI CCWGG 5 cut(s) 89, 327, 777, 870, 975
MwoI GCNNNNNNNGC 1 cut(s) 629
NciI CCSGG 2 cut(s) 383, 384
NcoI CCATGG 1 cut(s) 1002
NdeI CATATG 1 cut(s) 286
NdeII GATC 6 cut(s) 702, 1006, 1061, 1139, 1182, 1202
NlaIII CATG 6 cut(s) 122, 131, 244, 590, 1006, 1210
NlaIV GGNNCC 7 cut(s) 260, 421, 439, 642, 972, 1008, 1204
NmuCI GTSAC 1 cut(s) 386
NspI RCATGY 1 cut(s) 244
PciI ACATGT 1 cut(s) 240
PdmI GAANNNNTTC 2 cut(s) 931, 1100
PfeI GAWTC 2 cut(s) 559, 1351
PfoI TCCNGGA 2 cut(s) 325, 973
PkrI GCNGC 4 cut(s) 424, 457, 502, 1257
PmaCI CACGTG 1 cut(s) 1022
PmlI CACGTG 1 cut(s) 1022
Ppu21I YACGTR 2 cut(s) 364, 1022
PscI ACATGT 1 cut(s) 240
Psp6I CCWGG 5 cut(s) 87, 325, 775, 868, 973
PspCI CACGTG 1 cut(s) 1022
PspGI CCWGG 5 cut(s) 87, 325, 775, 868, 973
PspN4I GGNNCC 7 cut(s) 260, 421, 439, 642, 972, 1008, 1204
PspPI GGNCC 1 cut(s) 640
PstI CTGCAG 1 cut(s) 344
PsuI RGATCY 5 cut(s) 702, 1006, 1061, 1182, 1202
RsaI GTAC 3 cut(s) 109, 689, 1047
RsaNI GTAC 3 cut(s) 108, 688, 1046
SaqAI TTAA 3 cut(s) 180, 414, 882
SatI GCNGC 4 cut(s) 423, 456, 501, 1256
Sau3AI GATC 6 cut(s) 702, 1006, 1061, 1139, 1182, 1202
Sau96I GGNCC 1 cut(s) 640
ScaI AGTACT 1 cut(s) 1047
ScrFI CCNGG 7 cut(s) 89, 327, 383, 384, 777, 870, 975
SduI GDGCHC 3 cut(s) 263, 1280, 1349
SfaNI GCATC 2 cut(s) 502, 831
SfcI CTRYAG 4 cut(s) 111, 340, 618, 1212
SinI GGWCC 1 cut(s) 640
SmaI CCCGGG 1 cut(s) 384
SmlI CTYRAG 1 cut(s) 1088
SmoI CTYRAG 1 cut(s) 1088
Sse9I AATT 5 cut(s) 510, 645, 962, 1296, 1389
SsiI CCGC 3 cut(s) 256, 423, 968
SspI AATATT 2 cut(s) 103, 670
SspMI CTAG 3 cut(s) 924, 1034, 1121
StyD4I CCNGG 7 cut(s) 87, 325, 381, 382, 775, 868, 973
StyI CCWWGG 2 cut(s) 1002, 1173
TaaI ACNGT 5 cut(s) 66, 142, 172, 354, 619
TaiI ACGT 2 cut(s) 366, 1024
TaqI TCGA 4 cut(s) 5, 265, 789, 858
TasI AATT 5 cut(s) 510, 645, 962, 1296, 1389
TatI WGTACW 2 cut(s) 687, 1045
TauI GCSGC 1 cut(s) 425
TfiI GAWTC 2 cut(s) 559, 1351
Tru1I TTAA 3 cut(s) 180, 414, 882
Tru9I TTAA 3 cut(s) 180, 414, 882
TscAI CASTG 3 cut(s) 69, 642, 1278
TseFI GTSAC 1 cut(s) 386
TseI GCWGC 3 cut(s) 455, 500, 1255
Tsp45I GTSAC 1 cut(s) 386
TspDTI ATGAA 2 cut(s) 362, 924
TspGWI ACGGA 1 cut(s) 743
TspMI CCCGGG 1 cut(s) 382
TspRI CASTG 3 cut(s) 69, 642, 1278
VneI GTGCAC 1 cut(s) 1276
VpaK11BI GGWCC 1 cut(s) 640
XagI CCTNNNNNAGG 1 cut(s) 560
XbaI TCTAGA 1 cut(s) 923
XceI RCATGY 1 cut(s) 244
XmaI CCCGGG 1 cut(s) 382
XmiI GTMKAC 1 cut(s) 1211
XmnI GAANNNNTTC 2 cut(s) 931, 1100
XspI CTAG 3 cut(s) 924, 1034, 1121
ZrmI AGTACT 1 cut(s) 1047
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.