Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002184

Physical Location & Seq

Genomic Coordinates Forward (+)

11683672 .. 11687193

Gene Structure 3522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G149100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1230 bp

ATGGGCACAATCAAGGTTTTCAATGGAACATTGAAACCCAGCTCGTCCCCGCCGCTGCCTCCACCGGTCACGTGCTCTACCTCGTGCACAGAGACCGTTGATGGCTGCCACGAGTTTAAGATCAGTGGGTATTCGCTCGCCAAGGGCATGGGAATCGGCAAGTTCGTCGCGTCCGATTCCTTTGTTGTCGGTGGCTATACATGGGCAATATATTTCTACCCAGATGGCAAGAGCGTTGAGGACAACGCTGCGTTCGTGTCTCTTTTCATAGCTCTGGCGAGCGAGGGTACGGACGTCAGGGCTTTGTTCGAATTGACGCTTTTGGATCAGAGCGAGAAACAACGACACAAAGTGCATAGCCATTTTCTGAGGAGGCTCGATAGTGGTCCCTATACACTTAAGTACCGCGGAAGCATGTGGGGTTATAAACGTTTTTTCAAGAGAACTCAATTAGAGACATCAGACTTTCTTAAAGATGATTGCCTTATAATTAAATGTCGTGTTGGTGTTGTTAAGACAAATACTGAGGGACCTAAAATCTACTCTATAGCAGTGCCACCTTCCAATATCAGTCAGCATTTCGGTAAGCTTTTAGAAAGTGGAAAGTTGACTGATGTAAGTTTTGAAGTTGATCGGGAAGTATTTTCTGCCCACAAGGTGGTGCTTGCAGCACGATCGCCTGTGTTCAGGGCACAACTCTTTGGTCCGCTGAAAGATAAAAGCACTCATTGCATAAAAGTTGAAGACATTGAGGTTCCTGTTTTCAAGGCGTTGCTTCACTTCATCTACTGGGATGCTCTACCAGACATGCAAGAGCTTGTTGGGAGCCTAAATTCAAATTGGGCTTCTACAATGATGGCACAACATCTGTTGGCAGCAGCAGATCGTTATGGCCTTGAGAGGCTCAGATTGCTTTGTGAGGCTAAACTTTGCGAGAATGTTGCCATAAACAATGTTGCAACAACATTAGCCTTGGCAGAGCAGCACCACTGTTTCCAGCTTAAAGCTGTATGCCTCAAATTTATTGCAGTGCCTGAAAATTTAAGAGCTGTGATTGAAACTGATGGATATAAGTACTTGAGGGAAAGCTGCCCTTCTGTCATCACTGAGCTACTGCACTGTGTTGCAAGTATTGGTGAGCATTCTTTTGTTGCTTGTGGATATGGAAAAGGGACATTATTTGATGGCAGCGATACGAATGGAAGGCGGGTTAAGCCAAGGTTGTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006950 GO:0006970 GO:0007154 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009987 GO:0009991 GO:0010035 GO:0031668 GO:0033554 GO:0042221 GO:0042631 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071470 GO:0071472 GO:0071496 GO:0104004 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04340 ko04341 map04340 map04341

Pfam Domains

Protein Families

BTB

Protein Analysis

410

Amino Acids

45.43

Weight (kDa)

8.32

Isoelectric Point (pI)

29.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002184)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06190 AT3G06190 AT3G06190 AT3G06190 AT3G06190 AT5G19000 AT5G19000 AT5G19000
fragaria_vesca	FvH4_2g24040 FvH4_2g24040 FvH4_4g14240 FvH4_4g14240 FvH4_4g14240 FvH4_4g14240
malus_domestica	MD03G1269700.v1.1 MD11G1290500.v1.1 MD13G1181000.v1.1 MD16G1181700.v1.1
prunus_persica	Prupe.1G149100_v2.0.a1 Prupe.8G245800_v2.0.a1
pyrus_communis	pycom03g21500 pycom11g25780 pycom13g15620 pycom16g15250
rosa_chinensis	RchiOBHm_Chr4g0418941 RchiOBHm_Chr6g0291771
rosa_laevigata	RLG00000007840 RLG00000012086
rosa_multiflora	Rmu_sc0000935.1_g000060 Rmu_sc0002226.1_g000029 Rmu_sc0002713.1_g000011
rosa_roxburghii	Rroxscaffold_5G00362030 Rroxscaffold_7G00175770
rosa_rugosa	Rorug04G0155300 Rorug06G0221500
rosa_samantha	Rh4AG217300 Rh4BG213100 Rh6AG334300 Rh6BG341500 Rh6CG347500 Rh6DG334600
rosa_wichuraiana	Rw4G018570 Rw6G029100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	426, 488
AatII	GACGTC	1 cut(s)	297
AccB7I	CCANNNNNTGG	1 cut(s)	658
AccII	CGCG	2 cut(s)	170, 408
AciI	CCGC	6 cut(s)	50, 53, 406, 408, 707, 1207
AclI	AACGTT	1 cut(s)	430
AclWI	GGATC	1 cut(s)	333
AcsI	RAATTY	3 cut(s)	832, 1019, 1039
AcvI	CACGTG	1 cut(s)	72
AcyI	GRCGYC	1 cut(s)	294
AdeI	CACNNNGTG	2 cut(s)	352, 658
AfaI	GTAC	3 cut(s)	289, 404, 1076
AfiI	CCNNNNNNNGG	1 cut(s)	658
AflII	CTTAAG	1 cut(s)	398
AgeI	ACCGGT	1 cut(s)	64
AgsI	TTSAA	8 cut(s)	22, 34, 439, 626, 743, 766, 837, 1058
AluBI	AGCT	9 cut(s)	42, 272, 589, 817, 1000, 1007, 1049, 1089, 1111
AluI	AGCT	9 cut(s)	42, 272, 589, 817, 1000, 1007, 1049, 1089, 1111
Alw21I	GWGCWC	2 cut(s)	77, 89
Alw26I	GTCTC	3 cut(s)	86, 264, 449
Alw44I	GTGCAC	1 cut(s)	85
AlwI	GGATC	1 cut(s)	333
AlwNI	CAGNNNCTG	1 cut(s)	1034
AoxI	GGCC	1 cut(s)	892
ApaLI	GTGCAC	1 cut(s)	85
ApeKI	GCWGC	9 cut(s)	55, 105, 248, 668, 875, 878, 982, 1089, 1188
ApoI	RAATTY	3 cut(s)	832, 1019, 1039
AsiGI	ACCGGT	1 cut(s)	64
AspS9I	GGNCC	3 cut(s)	386, 530, 704
AsuHPI	GGTGA	1 cut(s)	1148
AsuII	TTCGAA	1 cut(s)	309
AvaII	GGWCC	3 cut(s)	386, 530, 704
BaeGI	GKGCMC	3 cut(s)	8, 89, 694
BaeI	ACNNNNGTAYC	4 cut(s)	279, 312, 386, 419
BauI	CACGAG	2 cut(s)	82, 110
BbrPI	CACGTG	1 cut(s)	72
BbsI	GAAGAC	1 cut(s)	750
Bbv12I	GWGCWC	2 cut(s)	77, 89
BbvI	GCAGC	9 cut(s)	42, 92, 235, 680, 887, 890, 994, 1076, 1200
BccI	CCATC	5 cut(s)	95, 218, 850, 1058, 1178
BcgI	CGANNNNNNTGC	8 cut(s)	136, 148, 170, 182, 657, 691, 923, 957
BcoDI	GTCTC	3 cut(s)	86, 264, 449
BfmI	CTRYAG	1 cut(s)	546
BfrI	CTTAAG	1 cut(s)	398
BmcAI	AGTACT	1 cut(s)	1076
Bme18I	GGWCC	3 cut(s)	386, 530, 704
BmgT120I	GGNCC	3 cut(s)	386, 530, 704
BmiI	GGNNCC	4 cut(s)	388, 531, 756, 827
BmrI	ACTGGG	1 cut(s)	799
BmsI	GCATC	1 cut(s)	784
BmuI	ACTGGG	1 cut(s)	799
BpiI	GAAGAC	1 cut(s)	750
Bpu14I	TTCGAA	1 cut(s)	309
BpuEI	CTTGAG	2 cut(s)	917, 1099
BsaAI	YACGTR	1 cut(s)	72
BsaHI	GRCGYC	1 cut(s)	294
BsaI	GGTCTC	1 cut(s)	86
BsaJI	CCNNGG	4 cut(s)	141, 406, 972, 1217
BsaWI	WCCGGW	1 cut(s)	64
Bsc4I	CCNNNNNNNGG	1 cut(s)	658
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	1 cut(s)	794
Bse3DI	GCAATG	1 cut(s)	727
BseDI	CCNNGG	4 cut(s)	141, 406, 972, 1217
BseGI	GGATG	1 cut(s)	799
BseLI	CCNNNNNNNGG	1 cut(s)	658
BseMI	GCAATG	1 cut(s)	727
BseMII	CTCAG	4 cut(s)	359, 516, 919, 1098
BseNI	ACTGG	1 cut(s)	794
BseRI	GAGGAG	1 cut(s)	385
BseSI	GKGCMC	3 cut(s)	8, 89, 694
BseXI	GCAGC	9 cut(s)	42, 92, 235, 680, 887, 890, 994, 1076, 1200
BseYI	CCCAGC	1 cut(s)	38
BsgI	GTGCAG	1 cut(s)	1100
Bsh1236I	CGCG	2 cut(s)	170, 408
Bsh1285I	CGRYCG	1 cut(s)	677
BshFI	GGCC	1 cut(s)	894
BshTI	ACCGGT	1 cut(s)	64
BsiEI	CGRYCG	1 cut(s)	677
BsiHKAI	GWGCWC	2 cut(s)	77, 89
BsiSI	CCGG	1 cut(s)	65
BslFI	GGGAC	4 cut(s)	31, 372, 543, 1186
BslI	CCNNNNNNNGG	1 cut(s)	658
BsmAI	GTCTC	3 cut(s)	86, 264, 449
BsmFI	GGGAC	4 cut(s)	31, 372, 543, 1186
BsmI	GAATGC	1 cut(s)	1141
BsnI	GGCC	1 cut(s)	894
Bso31I	GGTCTC	1 cut(s)	86
Bsp119I	TTCGAA	1 cut(s)	309
Bsp1286I	GDGCHC	4 cut(s)	8, 77, 89, 694
Bsp143I	GATC	5 cut(s)	120, 325, 631, 674, 883
BspACI	CCGC	6 cut(s)	50, 53, 406, 408, 707, 1207
BspANI	GGCC	1 cut(s)	894
BspCNI	CTCAG	4 cut(s)	360, 517, 918, 1099
BspFNI	CGCG	2 cut(s)	170, 408
BspLI	GGNNCC	4 cut(s)	388, 531, 756, 827
BspPI	GGATC	1 cut(s)	333
BspT104I	TTCGAA	1 cut(s)	309
BspTI	CTTAAG	1 cut(s)	398
BspTNI	GGTCTC	1 cut(s)	86
BsrDI	GCAATG	1 cut(s)	727
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	1 cut(s)	794
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	4 cut(s)	141, 406, 972, 1217
BssMI	GATC	5 cut(s)	120, 325, 631, 674, 883
BssNI	GRCGYC	1 cut(s)	294
BssSI	CACGAG	2 cut(s)	82, 110
BssT1I	CCWWGG	3 cut(s)	141, 972, 1217
Bst2BI	CACGAG	2 cut(s)	82, 110
Bst4CI	ACNGT	3 cut(s)	97, 992, 1121
BstACI	GRCGYC	1 cut(s)	294
BstAFI	CTTAAG	1 cut(s)	398
BstAPI	GCANNNNNTGC	1 cut(s)	729
BstBAI	YACGTR	1 cut(s)	72
BstBI	TTCGAA	1 cut(s)	309
BstC8I	GCNNGC	3 cut(s)	138, 280, 666
BstDEI	CTNAG	4 cut(s)	368, 525, 905, 1107
BstDSI	CCRYGG	1 cut(s)	406
BstF5I	GGATG	1 cut(s)	799
BstFNI	CGCG	2 cut(s)	170, 408
BstKTI	GATC	5 cut(s)	123, 328, 634, 677, 886
BstMAI	GTCTC	3 cut(s)	86, 264, 449
BstMBI	GATC	5 cut(s)	120, 325, 631, 674, 883
BstMCI	CGRYCG	1 cut(s)	677
BstMWI	GCNNNNNNNGC	3 cut(s)	729, 910, 1213
BstNSI	RCATGY	2 cut(s)	418, 811
BstSFI	CTRYAG	1 cut(s)	546
BstSLI	GKGCMC	3 cut(s)	8, 89, 694
BstUI	CGCG	2 cut(s)	170, 408
BstV1I	GCAGC	9 cut(s)	42, 92, 235, 680, 887, 890, 994, 1076, 1200
BstV2I	GAAGAC	1 cut(s)	750
BstXI	CCANNNNNNTGG	1 cut(s)	148
BsuRI	GGCC	1 cut(s)	894
BtgI	CCRYGG	1 cut(s)	406
BtsCI	GGATG	1 cut(s)	799
BtsI	GCAGTG	2 cut(s)	558, 1035
BtsIMutI	CAGTG	6 cut(s)	130, 558, 988, 1035, 1104, 1117
Cac8I	GCNNGC	3 cut(s)	138, 280, 666
CaiI	CAGNNNCTG	1 cut(s)	1034
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	3 cut(s)	386, 530, 704
Cfr42I	CCGCGG	1 cut(s)	409
CseI	GACGC	2 cut(s)	159, 325
Csp6I	GTAC	3 cut(s)	288, 403, 1075
CspAI	ACCGGT	1 cut(s)	64
CviAII	CATG	4 cut(s)	148, 201, 415, 808
CviQI	GTAC	3 cut(s)	288, 403, 1075
DdeI	CTNAG	4 cut(s)	368, 525, 905, 1107
DpnI	GATC	5 cut(s)	122, 327, 633, 676, 885
DpnII	GATC	5 cut(s)	120, 325, 631, 674, 883
DraIII	CACNNNGTG	2 cut(s)	352, 658
Eco130I	CCWWGG	3 cut(s)	141, 972, 1217
Eco31I	GGTCTC	1 cut(s)	86
Eco47I	GGWCC	3 cut(s)	386, 530, 704
Eco72I	CACGTG	1 cut(s)	72
EcoO109I	RGGNCCY	1 cut(s)	530
EcoT14I	CCWWGG	3 cut(s)	141, 972, 1217
ErhI	CCWWGG	3 cut(s)	141, 972, 1217
FaeI	CATG	4 cut(s)	151, 204, 418, 811
FalI	AAGNNNNNCTT	2 cut(s)	1078, 1110
FaqI	GGGAC	4 cut(s)	31, 372, 543, 1186
FatI	CATG	4 cut(s)	147, 200, 414, 807
FauI	CCCGC	2 cut(s)	57, 1200
FokI	GGATG	1 cut(s)	806
GsaI	CCCAGC	1 cut(s)	42
HaeIII	GGCC	1 cut(s)	894
HapII	CCGG	1 cut(s)	65
HgaI	GACGC	2 cut(s)	159, 325
Hin1I	GRCGYC	1 cut(s)	294
Hin1II	CATG	4 cut(s)	151, 204, 418, 811
HincII	GTYRAC	1 cut(s)	609
HindII	GTYRAC	1 cut(s)	609
HindIII	AAGCTT	1 cut(s)	587
HinfI	GANTC	2 cut(s)	153, 176
HpaII	CCGG	1 cut(s)	65
HphI	GGTGA	1 cut(s)	1148
Hpy166II	GTNNAC	2 cut(s)	87, 609
Hpy188I	TCNGA	5 cut(s)	175, 330, 369, 463, 908
Hpy188III	TCNNGA	2 cut(s)	439, 635
Hpy8I	GTNNAC	2 cut(s)	87, 609
Hpy99I	CGWCG	1 cut(s)	170
HpyAV	CCTTC	3 cut(s)	570, 1104, 1197
HpyCH4III	ACNGT	3 cut(s)	97, 992, 1121
HpyCH4IV	ACGT	3 cut(s)	71, 294, 430
HpyCH4V	TGCA	9 cut(s)	87, 355, 668, 732, 811, 959, 1028, 1117, 1127
HpyF10VI	GCNNNNNNNGC	3 cut(s)	729, 910, 1213
HpyF3I	CTNAG	4 cut(s)	368, 525, 905, 1107
HpySE526I	ACGT	3 cut(s)	71, 294, 430
Hsp92I	GRCGYC	1 cut(s)	294
Hsp92II	CATG	4 cut(s)	151, 204, 418, 811
KspI	CCGCGG	1 cut(s)	409
Kzo9I	GATC	5 cut(s)	120, 325, 631, 674, 883
LmnI	GCTCC	1 cut(s)	825
Lsp1109I	GCAGC	9 cut(s)	42, 92, 235, 680, 887, 890, 994, 1076, 1200
LweI	GCATC	1 cut(s)	784
MaeII	ACGT	3 cut(s)	71, 294, 430
MaeIII	GTNAC	1 cut(s)	67
MalI	GATC	5 cut(s)	122, 327, 633, 676, 885
MboI	GATC	5 cut(s)	120, 325, 631, 674, 883
MboII	GAAGA	1 cut(s)	755
MhlI	GDGCHC	4 cut(s)	8, 77, 89, 694
MluCI	AATT	7 cut(s)	311, 449, 489, 832, 838, 1019, 1039
MseI	TTAA	8 cut(s)	117, 399, 471, 492, 513, 1002, 1043, 1212
MspA1I	CMGCKG	3 cut(s)	55, 408, 709
MspCI	CTTAAG	1 cut(s)	398
MspI	CCGG	1 cut(s)	65
Mva1269I	GAATGC	1 cut(s)	1141
MvnI	CGCG	2 cut(s)	170, 408
MwoI	GCNNNNNNNGC	3 cut(s)	729, 910, 1213
NdeII	GATC	5 cut(s)	120, 325, 631, 674, 883
NlaIII	CATG	4 cut(s)	151, 204, 418, 811
NlaIV	GGNNCC	4 cut(s)	388, 531, 756, 827
NmuCI	GTSAC	1 cut(s)	67
NspI	RCATGY	2 cut(s)	418, 811
NspV	TTCGAA	1 cut(s)	309
PcsI	WCGNNNNNNNCGW	3 cut(s)	162, 171, 252
PctI	GAATGC	1 cut(s)	1141
PfeI	GAWTC	2 cut(s)	153, 176
PflMI	CCANNNNNTGG	1 cut(s)	658
PinAI	ACCGGT	1 cut(s)	64
Ple19I	CGATCG	1 cut(s)	677
PmaCI	CACGTG	1 cut(s)	72
PmlI	CACGTG	1 cut(s)	72
Ppu21I	YACGTR	1 cut(s)	72
PpuMI	RGGWCCY	1 cut(s)	530
PsiI	TTATAA	2 cut(s)	426, 488
Psp1406I	AACGTT	1 cut(s)	430
Psp5II	RGGWCCY	1 cut(s)	530
PspCI	CACGTG	1 cut(s)	72
PspFI	CCCAGC	1 cut(s)	38
PspN4I	GGNNCC	4 cut(s)	388, 531, 756, 827
PspPI	GGNCC	3 cut(s)	386, 530, 704
PspPPI	RGGWCCY	1 cut(s)	530
PstNI	CAGNNNCTG	1 cut(s)	1034
PvuI	CGATCG	1 cut(s)	677
RsaI	GTAC	3 cut(s)	289, 404, 1076
RsaNI	GTAC	3 cut(s)	288, 403, 1075
SacII	CCGCGG	1 cut(s)	409
SaqAI	TTAA	8 cut(s)	117, 399, 471, 492, 513, 1002, 1043, 1212
Sau3AI	GATC	5 cut(s)	120, 325, 631, 674, 883
Sau96I	GGNCC	3 cut(s)	386, 530, 704
ScaI	AGTACT	1 cut(s)	1076
SduI	GDGCHC	4 cut(s)	8, 77, 89, 694
SfaNI	GCATC	1 cut(s)	784
SfcI	CTRYAG	1 cut(s)	546
Sfr303I	CCGCGG	1 cut(s)	409
SfuI	TTCGAA	1 cut(s)	309
SgrBI	CCGCGG	1 cut(s)	409
SinI	GGWCC	3 cut(s)	386, 530, 704
SmlI	CTYRAG	3 cut(s)	398, 896, 1078
SmoI	CTYRAG	3 cut(s)	398, 896, 1078
Sse9I	AATT	7 cut(s)	311, 449, 489, 832, 838, 1019, 1039
SsiI	CCGC	6 cut(s)	50, 53, 406, 408, 707, 1207
StyI	CCWWGG	3 cut(s)	141, 972, 1217
TaaI	ACNGT	3 cut(s)	97, 992, 1121
TaiI	ACGT	3 cut(s)	74, 297, 433
TaqI	TCGA	2 cut(s)	309, 378
TasI	AATT	7 cut(s)	311, 449, 489, 832, 838, 1019, 1039
TatI	WGTACW	1 cut(s)	1074
TauI	GCSGC	1 cut(s)	55
TfiI	GAWTC	2 cut(s)	153, 176
Tru1I	TTAA	8 cut(s)	117, 399, 471, 492, 513, 1002, 1043, 1212
Tru9I	TTAA	8 cut(s)	117, 399, 471, 492, 513, 1002, 1043, 1212
TscAI	CASTG	6 cut(s)	130, 558, 995, 1035, 1111, 1124
TseFI	GTSAC	1 cut(s)	67
TseI	GCWGC	9 cut(s)	55, 105, 248, 668, 875, 878, 982, 1089, 1188
Tsp45I	GTSAC	1 cut(s)	67
TspDTI	ATGAA	2 cut(s)	256, 772
TspGWI	ACGGA	1 cut(s)	305
TspRI	CASTG	6 cut(s)	130, 558, 995, 1035, 1111, 1124
Van91I	CCANNNNNTGG	1 cut(s)	658
Vha464I	CTTAAG	1 cut(s)	398
VneI	GTGCAC	1 cut(s)	85
VpaK11BI	GGWCC	3 cut(s)	386, 530, 704
XapI	RAATTY	3 cut(s)	832, 1019, 1039
XceI	RCATGY	2 cut(s)	418, 811
ZraI	GACGTC	1 cut(s)	295
ZrmI	AGTACT	1 cut(s)	1076

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.