Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002184

Physical Location & Seq

Genomic Coordinates Forward (+)

27163440 .. 27174400

Gene Structure 10961 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0155300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2598 bp

ATGAAAGTGGCAGTGATTGGTTCTGGTATTAGTGGTTTGGTCTCAGCCTATTTTCTTGCAAAAGAAGGCGTTGAAGTGGTTCTATATGAGAAAAAAGACTACCTGGGTGATCATGCCAGGACTGTCACATATGATGGTGTTGATTTGGACCTTGGTTTCATGGTCTTCAATCATGTAATGTTTCCAAATATGATGGAGTTCTTTGAGAGCCTTGGAGTGGATATGGAGACATGCAACATGTCCTTCTCAGTGAGTTTAGATAAAGGACGGGGCTGTGAATGGGGTAGTCGAAATAGTCTCTCAAGCTTGTTTGCAGAAAAGAAGAACTTGTTCAACCCATACTTCTGGAAAATGCTTCGAGAAATCACCAAGTTTAAACATGATTTGATCAGTTATCTTGAGGTGCGTGAGAGTAACCCAGACATTGACCGGAATGAAAACTTTGGGCAGTTTATTGAGTCACATCACTACTCTGAACTATTTCAGAAGGCTTACCTTATTCCAATATGTAGTTCAATCTTATCGTGTCCTTCAGAAGGAGTTATAAGCTTCTCAGCTTTCTCTGTGCTTTCGGTTTGTCGCAATCATCATCTACTTCAGCTATTTGGCGGCCCACAGTGGCTTACCATCAAATGGGGTTCACATTGTTATGTGAAGAAGGTGAAAGAAGTGTTGGAGAGTAAAGGGTGTCAGATAAGAACCGGCTCTGAGGTGCATAAAGTTTCCACAACTGATGACGGTTGCACTGTTTTTACTGGAGATTGTTTTGAGGAAATTTACAATGGATGCATTATAGCTATCCAAGCCCCCAAAGCCGTGAGAATATTAGGAGAACAGGCAACACCGGATGAACTGAGAATACTTGGCGCCTTCCAATATGTGTACTGTGATATTTTCCTTCATCGTGACAAAACTTTTATGCCCCAAAATCTAGCAGCATGGAGTGCATTAAACTATCTTGGAAGTACTGACAACAAAGTATGTTTGACATACTGGCTCAATCAGGTTCAGAACCTCAGCGAAACACGTCAACCATATCTTGTGACACTCAATCCAGATCATACACCAAACCACACCTTGCTTAAGTGGTCAACAAGCCATCCGGTCCTATCTGTTGCTGCATCGAAAGCTTCGCTGGAGCTTCCTCATATTCAAGGAAAGAGAGGAATTTGGTTTTGTGGAGCATACCAGGGTTATGGCTTCCATGAGGATGGGCTAAAGGCTGGAGTGGCTGCAGCACATGGTATGCTTGGGAAAGGTTGTGCCCTGTTGGGAAACCCAAAACATATGGCTCTTTCATTGACAGAAACAGTGGCACGCCTATTTGTTACTACATTTCTTAGACATTATATATCTACCGGATGTTTAATCTTATTAGAAGAGGGAGGCACAATGTTGACCTTTGAGGGAAGCAGCAAGGACTGTTCTCTAAAATCCGTTCTCAAAGTTCACAGTCCTCAGTTTTACTGGAAAGTAATGACACTGCAGGCTGATTTAGGCATTGCAGTTGCATATATCAGTGGCGATTTTTCTTTCAATGATAAAGACCGAGGTCTTCTAAATCTTTTTATGCTTCTCATTGCCAACAGAGATTCTAATGCCTCAAAATCAAACAACAAAAGAGGATGGTGGCAGCCTTTGTTTTTCACAGCCACTATAGCCTCAGCCAGTTACTTCTTTCAGCATGCTTTTACGCAAAATAGTCTTGCACAGGCTCGAAGGAACATTTCTCATCATTATGATCTGAGTAATGAACTATTTTCGCTGTTCTTGGGCGAAACAATGATGTATTCCACTGCAATATTTAAGACAGAAGATGAGGAACTGAATACTGCACAGCTTAGGAAAATCTCTACTCTCATTGATAAGGCTAGAATCGATGAGAACCATGAGGTTCTAGATATTGGTTGTGGTTGGGGAACCTTAGCTATTGAAGCAGTTAAACAAACGGGCTGCAGATACACTGGCATCACTCTATCTGAGGAACAACTTAAATTTGCTGAAAAGAAAGTGAAAGATGCTGGACTTCAGCACCGGATCAAGTTCCTTCTGTGTGACTACCGCCAATTGCCTTCTGACCACAAATATGACAGAATCATTTCTTGCGAGATGCTAGAACATGTCGGCCATGAATTTGTGGATGAGTTCTTTTCTTGCTGTGAGTCTGTACTGGCAAAAAATGGGCTTTTTATTCTCCAGTTCATATCTGTGCCGGATGATCGATATGATGAGTACAGGCAAAATTCAGGCTACTTCATAAAGGAATATATATTTCCTGGTGGATGTCTACCTTCATTAAGTAGGGTAACATCAGCCATGGCCGCTTCTTCTGGACTCTGTGTGGAGCACTTGGAAAACATTGGAATTCATTATTACCAAACACTAAGATGTTGGAGAAAGAATTTCTTAGAGAGACAGAGTGAAATACTCGCTCTTGGATTCAATGAAAATTTCATTCGGACATGGGAATATTATTTTGATTATTTTGCTGCTGGTTTCAAGTCATATACACTTCGAGATTACCAGATTGTGTTTTCACGTCCTGGTAATGCTCTCACATTCAACAATCCATATAAGGGTTTCCCTTCAGCATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006950 GO:0006970 GO:0007154 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009987 GO:0009991 GO:0010035 GO:0031668 GO:0033554 GO:0042221 GO:0042631 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071470 GO:0071472 GO:0071496 GO:0104004 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04340 ko04341 map04340 map04341

Pfam Domains

Protein Families

BTB

Protein Analysis

865

Amino Acids

98.15

Weight (kDa)

6.31

Isoelectric Point (pI)

32.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAO	PF01266	2 - 39	1.3e-07	FAD dependent oxidoreductase
NAD_binding_8	PF13450	5 - 71	3.7e-15	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	10 - 306	7.6e-16	Flavin containing amine oxidoreductase
CMAS	PF02353	570 - 839	4.9e-80	Mycolic acid cyclopropane synthetase
Methyltransf_23	PF13489	615 - 751	3e-11	Methyltransferase domain
Methyltransf_31	PF13847	627 - 736	2.8e-14	Methyltransferase domain
MTS	PF05175	627 - 730	1.2e-07	Methyltransferase small domain
Methyltransf_25	PF13649	632 - 728	4.6e-18	Methyltransferase domain
Methyltransf_11	PF08241	633 - 732	2.8e-15	Methyltransferase domain
Methyltransf_12	PF08242	633 - 730	2.1e-12	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002184)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06190 AT3G06190 AT3G06190 AT3G06190 AT3G06190 AT5G19000 AT5G19000 AT5G19000
fragaria_vesca	FvH4_2g24040 FvH4_2g24040 FvH4_4g14240 FvH4_4g14240 FvH4_4g14240 FvH4_4g14240
malus_domestica	MD03G1269700.v1.1 MD11G1290500.v1.1 MD13G1181000.v1.1 MD16G1181700.v1.1
prunus_persica	Prupe.1G149100_v2.0.a1 Prupe.8G245800_v2.0.a1
pyrus_communis	pycom03g21500 pycom11g25780 pycom13g15620 pycom16g15250
rosa_chinensis	RchiOBHm_Chr4g0418941 RchiOBHm_Chr6g0291771
rosa_laevigata	RLG00000007840 RLG00000012086
rosa_multiflora	Rmu_sc0000935.1_g000060 Rmu_sc0002226.1_g000029 Rmu_sc0002713.1_g000011
rosa_roxburghii	Rroxscaffold_5G00362030 Rroxscaffold_7G00175770
rosa_rugosa	Rorug04G0155300 Rorug06G0221500
rosa_samantha	Rh4AG217300 Rh4BG213100 Rh6AG334300 Rh6BG341500 Rh6CG347500 Rh6DG334600
rosa_wichuraiana	Rw4G018570 Rw6G029100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	545
AccB1I	GGYRCC	1 cut(s)	866
AccB7I	CCANNNNNTGG	1 cut(s)	633
AccI	GTMKAC	1 cut(s)	2287
AciI	CCGC	3 cut(s)	609, 2062, 2322
AclWI	GGATC	1 cut(s)	2045
AcoI	YGGCCR	2 cut(s)	2125, 2319
AcsI	RAATTY	8 cut(s)	774, 1167, 1994, 2132, 2242, 2364, 2401, 2449
AcuI	CTGAAG	4 cut(s)	516, 581, 2012, 2571
AcyI	GRCGYC	1 cut(s)	867
AfaI	GTAC	4 cut(s)	884, 967, 2169, 2234
AfiI	CCNNNNNNNGG	4 cut(s)	217, 536, 633, 2576
AflII	CTTAAG	1 cut(s)	1082
AflIII	ACRYGT	3 cut(s)	237, 1025, 2119
AjiI	CACGTC	2 cut(s)	1028, 2540
AjnI	CCWGG	5 cut(s)	102, 116, 1188, 2275, 2542
AjuI	GAANNNNNNNTTGG	4 cut(s)	496, 528, 656, 688
AluBI	AGCT	9 cut(s)	306, 549, 557, 601, 797, 1130, 1141, 1840, 1928
AluI	AGCT	9 cut(s)	306, 549, 557, 601, 797, 1130, 1141, 1840, 1928
Alw21I	GWGCWC	1 cut(s)	2349
Alw26I	GTCTC	4 cut(s)	46, 221, 302, 2407
AlwI	GGATC	1 cut(s)	2045
AoxI	GGCC	3 cut(s)	610, 2125, 2319
ApeKI	GCWGC	8 cut(s)	935, 1118, 1232, 1235, 1413, 1633, 1953, 2489
ApoI	RAATTY	8 cut(s)	774, 1167, 1994, 2132, 2242, 2364, 2401, 2449
Asp700I	GAANNNNTTC	4 cut(s)	78, 329, 480, 2098
AspLEI	GCGC	1 cut(s)	869
AspS9I	GGNCC	3 cut(s)	148, 611, 1105
AsuHPI	GGTGA	3 cut(s)	119, 358, 673
AvaII	GGWCC	2 cut(s)	148, 1105
BaeGI	GKGCMC	1 cut(s)	1267
BanI	GGYRCC	1 cut(s)	866
BbsI	GAAGAC	2 cut(s)	157, 1547
Bbv12I	GWGCWC	1 cut(s)	2349
BbvCI	CCTCAGC	2 cut(s)	1016, 1663
BbvI	GCAGC	8 cut(s)	947, 1105, 1219, 1247, 1425, 1645, 1940, 2476
BccI	CCATC	6 cut(s)	128, 187, 635, 1107, 1205, 1620
BceAI	ACGGC	1 cut(s)	800
BciT130I	CCWGG	5 cut(s)	104, 118, 1190, 2277, 2544
BclI	TGATCA	2 cut(s)	109, 387
BcoDI	GTCTC	4 cut(s)	46, 221, 302, 2407
BfaI	CTAG	4 cut(s)	932, 1872, 1898, 2114
BfmI	CTRYAG	4 cut(s)	1233, 1484, 1656, 1954
BfoI	RGCGCY	1 cut(s)	870
BfrI	CTTAAG	1 cut(s)	1082
BmcAI	AGTACT	1 cut(s)	967
Bme1390I	CCNGG	5 cut(s)	104, 118, 1190, 2277, 2544
Bme18I	GGWCC	2 cut(s)	148, 1105
BmgBI	CACGTC	2 cut(s)	1028, 2540
BmgT120I	GGNCC	3 cut(s)	148, 611, 1105
BmiI	GGNNCC	2 cut(s)	868, 1921
BmrFI	CCNGG	5 cut(s)	104, 118, 1190, 2277, 2544
BmsI	GCATC	5 cut(s)	776, 1130, 1977, 2008, 2100
BoxI	GACNNNNGTC	1 cut(s)	1551
BpiI	GAAGAC	2 cut(s)	157, 1547
BpmI	CTGGAG	4 cut(s)	777, 1157, 1245, 2180
Bpu10I	CCTNAGC	4 cut(s)	1016, 1663, 1841, 1924
BpuEI	CTTGAG	2 cut(s)	286, 419
Bsa29I	ATCGAT	2 cut(s)	1878, 2221
BsaHI	GRCGYC	1 cut(s)	867
BsaI	GGTCTC	1 cut(s)	46
BsaJI	CCNNGG	6 cut(s)	103, 151, 211, 1189, 1549, 2316
BsaWI	WCCGGW	5 cut(s)	429, 844, 1102, 1358, 2034
Bsc4I	CCNNNNNNNGG	4 cut(s)	217, 536, 633, 2576
Bse118I	RCCGGY	1 cut(s)	701
Bse1I	ACTGG	7 cut(s)	760, 998, 1472, 1668, 1969, 2175, 2197
Bse3DI	GCAATG	2 cut(s)	1500, 1578
BseBI	CCWGG	5 cut(s)	104, 118, 1190, 2277, 2544
BseCI	ATCGAT	2 cut(s)	1878, 2221
BseDI	CCNNGG	6 cut(s)	103, 151, 211, 1189, 1549, 2316
BseGI	GGATG	9 cut(s)	791, 853, 1099, 1216, 1367, 1631, 2146, 2221, 2288
BseLI	CCNNNNNNNGG	4 cut(s)	217, 536, 633, 2576
BseMI	GCAATG	2 cut(s)	1500, 1578
BseNI	ACTGG	7 cut(s)	760, 998, 1472, 1668, 1969, 2175, 2197
BseSI	GKGCMC	1 cut(s)	1267
BseXI	GCAGC	8 cut(s)	947, 1105, 1219, 1247, 1425, 1645, 1940, 2476
BsgI	GTGCAG	1 cut(s)	1818
BshFI	GGCC	3 cut(s)	612, 2127, 2321
BshNI	GGYRCC	1 cut(s)	866
BshVI	ATCGAT	2 cut(s)	1878, 2221
BsiHKAI	GWGCWC	1 cut(s)	2349
BsiSI	CCGG	7 cut(s)	430, 702, 845, 1103, 1359, 2035, 2213
BslI	CCNNNNNNNGG	4 cut(s)	217, 536, 633, 2576
BsmAI	GTCTC	4 cut(s)	46, 221, 302, 2407
BsnI	GGCC	3 cut(s)	612, 2127, 2321
Bso31I	GGTCTC	1 cut(s)	46
Bsp1286I	GDGCHC	2 cut(s)	1267, 2349
Bsp143I	GATC	6 cut(s)	109, 387, 1057, 1741, 2037, 2218
Bsp19I	CCATGG	1 cut(s)	2316
BspACI	CCGC	3 cut(s)	609, 2062, 2322
BspANI	GGCC	3 cut(s)	612, 2127, 2321
BspDI	ATCGAT	2 cut(s)	1878, 2221
BspLI	GGNNCC	2 cut(s)	868, 1921
BspMAI	CTGCAG	3 cut(s)	1237, 1488, 1958
BspPI	GGATC	1 cut(s)	2045
BspT107I	GGYRCC	1 cut(s)	866
BspTI	CTTAAG	1 cut(s)	1082
BspTNI	GGTCTC	1 cut(s)	46
BsrDI	GCAATG	2 cut(s)	1500, 1578
BsrFI	RCCGGY	1 cut(s)	701
BsrI	ACTGG	7 cut(s)	760, 998, 1472, 1668, 1969, 2175, 2197
BssAI	RCCGGY	1 cut(s)	701
BssECI	CCNNGG	6 cut(s)	103, 151, 211, 1189, 1549, 2316
BssMI	GATC	6 cut(s)	109, 387, 1057, 1741, 2037, 2218
BssNI	GRCGYC	1 cut(s)	867
BssT1I	CCWWGG	3 cut(s)	151, 211, 2316
Bst2UI	CCWGG	5 cut(s)	104, 118, 1190, 2277, 2544
Bst4CI	ACNGT	8 cut(s)	124, 618, 740, 748, 887, 1312, 1424, 1454
Bst6I	CTCTTC	1 cut(s)	1374
BstACI	GRCGYC	1 cut(s)	867
BstAFI	CTTAAG	1 cut(s)	1082
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstC8I	GCNNGC	3 cut(s)	1318, 1488, 1686
BstDSI	CCRYGG	1 cut(s)	2316
BstENI	CCTNNNNNAGG	1 cut(s)	534
BstF5I	GGATG	9 cut(s)	791, 853, 1099, 1216, 1367, 1631, 2146, 2221, 2288
BstH2I	RGCGCY	1 cut(s)	870
BstHHI	GCGC	1 cut(s)	869
BstKTI	GATC	6 cut(s)	112, 390, 1060, 1744, 2040, 2221
BstMAI	GTCTC	4 cut(s)	46, 221, 302, 2407
BstMBI	GATC	6 cut(s)	109, 387, 1057, 1741, 2037, 2218
BstMWI	GCNNNNNNNGC	8 cut(s)	803, 812, 944, 1127, 1229, 1658, 1934, 2321
BstNI	CCWGG	5 cut(s)	104, 118, 1190, 2277, 2544
BstNSI	RCATGY	4 cut(s)	234, 241, 1688, 2123
BstPAI	GACNNNNGTC	1 cut(s)	1551
BstSCI	CCNGG	5 cut(s)	102, 116, 1188, 2275, 2542
BstSFI	CTRYAG	4 cut(s)	1233, 1484, 1656, 1954
BstSLI	GKGCMC	1 cut(s)	1267
BstV1I	GCAGC	8 cut(s)	947, 1105, 1219, 1247, 1425, 1645, 1940, 2476
BstV2I	GAAGAC	2 cut(s)	157, 1547
BstXI	CCANNNNNNTGG	3 cut(s)	345, 1196, 1211
Bsu15I	ATCGAT	2 cut(s)	1878, 2221
BsuRI	GGCC	3 cut(s)	612, 2127, 2321
BsuTUI	ATCGAT	2 cut(s)	1878, 2221
BtgI	CCRYGG	1 cut(s)	2316
BtrI	CACGTC	2 cut(s)	1028, 2540
BtsCI	GGATG	9 cut(s)	791, 853, 1099, 1216, 1367, 1631, 2146, 2221, 2288
BtsI	GCAGTG	3 cut(s)	18, 1481, 1794
BtsIMutI	CAGTG	9 cut(s)	18, 255, 623, 744, 1317, 1481, 1525, 1794, 1962
Cac8I	GCNNGC	3 cut(s)	1318, 1488, 1686
CfoI	GCGC	1 cut(s)	869
Cfr10I	RCCGGY	1 cut(s)	701
Cfr13I	GGNCC	3 cut(s)	148, 611, 1105
ClaI	ATCGAT	2 cut(s)	1878, 2221
Csp6I	GTAC	4 cut(s)	883, 966, 2168, 2233
CviQI	GTAC	4 cut(s)	883, 966, 2168, 2233
DinI	GGCGCC	1 cut(s)	868
DpnI	GATC	6 cut(s)	111, 389, 1059, 1743, 2039, 2220
DpnII	GATC	6 cut(s)	109, 387, 1057, 1741, 2037, 2218
DraI	TTTAAA	1 cut(s)	376
EaeI	YGGCCR	2 cut(s)	2125, 2319
Eam1104I	CTCTTC	1 cut(s)	1374
EarI	CTCTTC	1 cut(s)	1374
Eco130I	CCWWGG	3 cut(s)	151, 211, 2316
Eco31I	GGTCTC	1 cut(s)	46
Eco47I	GGWCC	2 cut(s)	148, 1105
Eco57I	CTGAAG	4 cut(s)	516, 581, 2012, 2571
EcoNI	CCTNNNNNAGG	1 cut(s)	534
EcoRI	GAATTC	1 cut(s)	2364
EcoRII	CCWGG	5 cut(s)	102, 116, 1188, 2275, 2542
EcoT14I	CCWWGG	3 cut(s)	151, 211, 2316
EcoT22I	ATGCAT	1 cut(s)	791
EgeI	GGCGCC	1 cut(s)	868
EheI	GGCGCC	1 cut(s)	868
ErhI	CCWWGG	3 cut(s)	151, 211, 2316
FalI	AAGNNNNNCTT	4 cut(s)	311, 343, 2390, 2422
FauNDI	CATATG	2 cut(s)	130, 1287
FbaI	TGATCA	2 cut(s)	109, 387
FblI	GTMKAC	1 cut(s)	2287
FokI	GGATG	9 cut(s)	798, 860, 1086, 1223, 1374, 1638, 2153, 2228, 2295
FspBI	CTAG	4 cut(s)	932, 1872, 1898, 2114
GlaI	GCGC	1 cut(s)	868
GsuI	CTGGAG	4 cut(s)	777, 1157, 1245, 2180
HaeII	RGCGCY	1 cut(s)	870
HaeIII	GGCC	3 cut(s)	612, 2127, 2321
HapII	CCGG	7 cut(s)	430, 702, 845, 1103, 1359, 2035, 2213
HhaI	GCGC	1 cut(s)	869
Hin1I	GRCGYC	1 cut(s)	867
Hin6I	GCGC	1 cut(s)	867
HinP1I	GCGC	1 cut(s)	867
HincII	GTYRAC	3 cut(s)	1031, 1092, 1398
HindII	GTYRAC	3 cut(s)	1031, 1092, 1398
HindIII	AAGCTT	3 cut(s)	304, 547, 1128
HinfI	GANTC	7 cut(s)	458, 1592, 1875, 2094, 2162, 2334, 2439
HpaII	CCGG	7 cut(s)	430, 702, 845, 1103, 1359, 2035, 2213
HphI	GGTGA	3 cut(s)	119, 358, 673
Hpy166II	GTNNAC	7 cut(s)	641, 883, 1031, 1092, 1398, 1450, 2288
Hpy188III	TCNNGA	8 cut(s)	346, 359, 398, 905, 1055, 1898, 2331, 2516
Hpy8I	GTNNAC	7 cut(s)	641, 883, 1031, 1092, 1398, 1450, 2288
HpyCH4III	ACNGT	8 cut(s)	124, 618, 740, 748, 887, 1312, 1424, 1454
HpyCH4IV	ACGT	2 cut(s)	1027, 2539
HpyF10VI	GCNNNNNNNGC	8 cut(s)	803, 812, 944, 1127, 1229, 1658, 1934, 2321
HpySE526I	ACGT	2 cut(s)	1027, 2539
Hsp92I	GRCGYC	1 cut(s)	867
HspAI	GCGC	1 cut(s)	867
KasI	GGCGCC	1 cut(s)	866
Ksp22I	TGATCA	2 cut(s)	109, 387
Kzo9I	GATC	6 cut(s)	109, 387, 1057, 1741, 2037, 2218
LmnI	GCTCC	3 cut(s)	1138, 1181, 2344
Lsp1109I	GCAGC	8 cut(s)	947, 1105, 1219, 1247, 1425, 1645, 1940, 2476
LweI	GCATC	5 cut(s)	776, 1130, 1977, 2008, 2100
MaeI	CTAG	4 cut(s)	932, 1872, 1898, 2114
MaeII	ACGT	2 cut(s)	1027, 2539
MaeIII	GTNAC	9 cut(s)	124, 413, 459, 905, 1042, 1327, 1670, 2054, 2305
MalI	GATC	6 cut(s)	111, 389, 1059, 1743, 2039, 2220
MboI	GATC	6 cut(s)	109, 387, 1057, 1741, 2037, 2218
MboII	GAAGA	7 cut(s)	157, 334, 667, 1391, 1547, 1826, 2319
MfeI	CAATTG	1 cut(s)	2066
MhlI	GDGCHC	2 cut(s)	1267, 2349
MluCI	AATT	9 cut(s)	774, 1167, 1994, 2066, 2132, 2242, 2364, 2401, 2449
Mly113I	GGCGCC	1 cut(s)	867
MlyI	GAGTC	3 cut(s)	467, 2171, 2328
MmeI	TCCRAC	2 cut(s)	654, 2372
Mph1103I	ATGCAT	1 cut(s)	791
MroXI	GAANNNNTTC	4 cut(s)	78, 329, 480, 2098
MseI	TTAA	8 cut(s)	375, 950, 1083, 1367, 1806, 1941, 1992, 2297
MslI	CAYNNNNRTG	6 cut(s)	648, 1209, 1737, 2085, 2207, 2386
MspCI	CTTAAG	1 cut(s)	1082
MspI	CCGG	7 cut(s)	430, 702, 845, 1103, 1359, 2035, 2213
MspR9I	CCNGG	5 cut(s)	104, 118, 1190, 2277, 2544
MssI	GTTTAAAC	1 cut(s)	376
MunI	CAATTG	1 cut(s)	2066
MvaI	CCWGG	5 cut(s)	104, 118, 1190, 2277, 2544
MwoI	GCNNNNNNNGC	8 cut(s)	803, 812, 944, 1127, 1229, 1658, 1934, 2321
NarI	GGCGCC	1 cut(s)	867
NcoI	CCATGG	1 cut(s)	2316
NdeI	CATATG	2 cut(s)	130, 1287
NdeII	GATC	6 cut(s)	109, 387, 1057, 1741, 2037, 2218
NlaIV	GGNNCC	2 cut(s)	868, 1921
NmuCI	GTSAC	5 cut(s)	124, 459, 905, 1042, 2054
NsiI	ATGCAT	1 cut(s)	791
NspI	RCATGY	4 cut(s)	234, 241, 1688, 2123
PaeI	GCATGC	1 cut(s)	1688
PciI	ACATGT	2 cut(s)	237, 2119
PdmI	GAANNNNTTC	4 cut(s)	78, 329, 480, 2098
PfeI	GAWTC	4 cut(s)	1592, 1875, 2094, 2439
PflMI	CCANNNNNTGG	1 cut(s)	633
PleI	GAGTC	3 cut(s)	466, 2170, 2328
PluTI	GGCGCC	1 cut(s)	870
PmeI	GTTTAAAC	1 cut(s)	376
PpsI	GAGTC	3 cut(s)	466, 2170, 2328
PscI	ACATGT	2 cut(s)	237, 2119
PshAI	GACNNNNGTC	1 cut(s)	1551
PsiI	TTATAA	1 cut(s)	545
Psp6I	CCWGG	5 cut(s)	102, 116, 1188, 2275, 2542
PspGI	CCWGG	5 cut(s)	102, 116, 1188, 2275, 2542
PspN4I	GGNNCC	2 cut(s)	868, 1921
PspPI	GGNCC	3 cut(s)	148, 611, 1105
PsrI	GAACNNNNNNTAC	2 cut(s)	843, 875
PstI	CTGCAG	3 cut(s)	1237, 1488, 1958
RsaI	GTAC	4 cut(s)	884, 967, 2169, 2234
RsaNI	GTAC	4 cut(s)	883, 966, 2168, 2233
RseI	CAYNNNNRTG	6 cut(s)	648, 1209, 1737, 2085, 2207, 2386
SaqAI	TTAA	8 cut(s)	375, 950, 1083, 1367, 1806, 1941, 1992, 2297
Sau3AI	GATC	6 cut(s)	109, 387, 1057, 1741, 2037, 2218
Sau96I	GGNCC	3 cut(s)	148, 611, 1105
ScaI	AGTACT	1 cut(s)	967
SchI	GAGTC	3 cut(s)	467, 2171, 2328
ScrFI	CCNGG	5 cut(s)	104, 118, 1190, 2277, 2544
SduI	GDGCHC	2 cut(s)	1267, 2349
SfaNI	GCATC	5 cut(s)	776, 1130, 1977, 2008, 2100
SfcI	CTRYAG	4 cut(s)	1233, 1484, 1656, 1954
SfoI	GGCGCC	1 cut(s)	868
SinI	GGWCC	2 cut(s)	148, 1105
SmiMI	CAYNNNNRTG	6 cut(s)	648, 1209, 1737, 2085, 2207, 2386
SmlI	CTYRAG	3 cut(s)	301, 398, 1082
SmoI	CTYRAG	3 cut(s)	301, 398, 1082
SphI	GCATGC	1 cut(s)	1688
Sse9I	AATT	9 cut(s)	774, 1167, 1994, 2066, 2132, 2242, 2364, 2401, 2449
SsiI	CCGC	3 cut(s)	609, 2062, 2322
SspDI	GGCGCC	1 cut(s)	866
SspI	AATATT	3 cut(s)	825, 1803, 2471
SspMI	CTAG	4 cut(s)	932, 1872, 1898, 2114
StyD4I	CCNGG	5 cut(s)	102, 116, 1188, 2275, 2542
StyI	CCWWGG	3 cut(s)	151, 211, 2316
TaaI	ACNGT	8 cut(s)	124, 618, 740, 748, 887, 1312, 1424, 1454
TaiI	ACGT	2 cut(s)	1030, 2542
TaqI	TCGA	7 cut(s)	289, 358, 1124, 1717, 1878, 2221, 2515
TaqII	GACCGA	1 cut(s)	1563
TasI	AATT	9 cut(s)	774, 1167, 1994, 2066, 2132, 2242, 2364, 2401, 2449
TatI	WGTACW	4 cut(s)	882, 965, 2167, 2232
TauI	GCSGC	2 cut(s)	612, 2324
TfiI	GAWTC	4 cut(s)	1592, 1875, 2094, 2439
Tru1I	TTAA	8 cut(s)	375, 950, 1083, 1367, 1806, 1941, 1992, 2297
Tru9I	TTAA	8 cut(s)	375, 950, 1083, 1367, 1806, 1941, 1992, 2297
TscAI	CASTG	9 cut(s)	18, 255, 623, 751, 1317, 1488, 1525, 1801, 1969
TseFI	GTSAC	5 cut(s)	124, 459, 905, 1042, 2054
TseI	GCWGC	8 cut(s)	935, 1118, 1232, 1235, 1413, 1633, 1953, 2489
Tsp45I	GTSAC	5 cut(s)	124, 459, 905, 1042, 2054
TspGWI	ACGGA	1 cut(s)	1426
TspRI	CASTG	9 cut(s)	18, 255, 623, 751, 1317, 1488, 1525, 1801, 1969
Van91I	CCANNNNNTGG	1 cut(s)	633
Vha464I	CTTAAG	1 cut(s)	1082
VpaK11BI	GGWCC	2 cut(s)	148, 1105
XagI	CCTNNNNNAGG	1 cut(s)	534
XapI	RAATTY	8 cut(s)	774, 1167, 1994, 2132, 2242, 2364, 2401, 2449
XbaI	TCTAGA	1 cut(s)	1897
XceI	RCATGY	4 cut(s)	234, 241, 1688, 2123
XmiI	GTMKAC	1 cut(s)	2287
XmnI	GAANNNNTTC	4 cut(s)	78, 329, 480, 2098
XspI	CTAG	4 cut(s)	932, 1872, 1898, 2114
ZrmI	AGTACT	1 cut(s)	967
Zsp2I	ATGCAT	1 cut(s)	791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.