Prupe.8G245800_v2.0.a1

BTB POZ and MATH domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
21339372 .. 21343320
3949 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G245800.1

Sequence Viewer

Length: 1230 bp
ATGGGTAAGGTTTTCAGAGAAACCTCCAGGCCCTCGTCTTCTTCATCTTGCCCGGCCTCTTCGTCGCCCCCGACAACCACATCGACGTCGATCACCGAGACCGTCAACGGGACCCACCATTTCAAGATCACGGGTTATTCTTTGTCCAAAGGGATTGGGATTGGGAAGTACATAGCGTCCGATACGTTTAATGTGGGCGGGTATTCGTGGGCCATCTATTTTTACCCAGACGGCAAGAGCGTCGAGGACAATGCCGCGTACGTCTCGCTCTTCATCGCGCTCGCGAGCGAAGGAACCGATGTGAGAGCTCTCTTCGAATTGACCCTTTTGGATCAGAGTGGGAATGAGAGGCACAAAGTGCATAGCCATTTCGGGAGGACCTTGGATAGCGGGCCCTACACGCTCAAGTATCGCGGTAGTATGTGGGGTTACAAGCGTTTCTTCAAAAGAACTTCTCTGGAGACATCAGACTACCTTAAAGACGACTGCTTGTCAGTGAACTGTATGGTTGGTGTTGTGAAGTCACACACGGAGGGGCCAAAAATATACTCCATACCAGTACCACCATCCAGCATGGGCCATCAGTTTGGGCGGCTACTGGAAAGTGGAAAGGGAACTGATGTAAATTTCGAAATTGACGGCGAAATTTTTGCTGCTCACAAGTTGGTACTAGCAGCTCGATCACCTGTATTCAGGGCCCAACTATTTGGTCCTATGAAGGATCAGAACACTCGGTGCATAAACGTTGAGGACATAGAGGCTCCAGTCTTTAAGGCTTTACTTCATTTCATATACTGGGACTCTCTGCCCGACATAGAAGAGCTTACTGGAATAAACTCCAACGGGTCTTCCACTTTGATGGCACAGCATCTGCTTGCAGCAGCAGATCGGTATGGCTTAGATAGACTTCGGTTGTTATGTGAGGCAAATCTCTGCAAAGATTTTGCGATAAACACAGTGGCAACGACATTAGCATTGGCAGAACAACATCACTGCTTCCAGCTGAAAGTTGTGTGTCTCAGATTCGTTGCAACACCTGGAAATCTATCAGGTGTGATGCAAACGGATGGTTACAAACACTTGAAGGAAAGCTGCCCGTCTGTTTTGACTGAACTCTTGGAATATGTAGCTAGAGTTAGTGAACATTCTGTATCTCTATGCAGGCATGGGAATGAAGCTATTCTTGATGGTAGTGACATCAATGGCAGGCGGGTGAAGCAAAGGCTATAG

Protein Analysis

410

Amino Acids

45.07

Weight (kDa)

6.94

Isoelectric Point (pI)

31.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 89
AccII CGCG 4 cut(s) 257, 278, 284, 414
AciI CCGC 6 cut(s) 198, 255, 390, 414, 592, 1210
AclI AACGTT 1 cut(s) 744
AclWI GGATC 2 cut(s) 339, 729
AcsI RAATTY 2 cut(s) 625, 645
AcyI GRCGYC 1 cut(s) 86
AdeI CACNNNGTG 2 cut(s) 358, 735
AfaI GTAC 4 cut(s) 170, 260, 561, 669
AfiI CCNNNNNNNGG 1 cut(s) 108
AgsI TTSAA 3 cut(s) 124, 445, 1084
AhdI GACNNNNNGTC 1 cut(s) 490
AjnI CCWGG 2 cut(s) 26, 1036
AluBI AGCT 7 cut(s) 308, 677, 823, 1003, 1092, 1130, 1178
AluI AGCT 7 cut(s) 308, 677, 823, 1003, 1092, 1130, 1178
Alw21I GWGCWC 1 cut(s) 310
Alw26I GTCTC 4 cut(s) 92, 268, 455, 1022
AlwI GGATC 2 cut(s) 339, 729
AlwNI CAGNNNCTG 1 cut(s) 871
AoxI GGCC 7 cut(s) 29, 54, 210, 392, 536, 577, 696
ApaI GGGCCC 2 cut(s) 396, 700
ApeKI GCWGC 5 cut(s) 653, 674, 878, 881, 1092
ApoI RAATTY 2 cut(s) 625, 645
Asp700I GAANNNNTTC 1 cut(s) 1179
AspLEI GCGC 1 cut(s) 280
AsuC2I CCSGG 1 cut(s) 53
AsuHPI GGTGA 3 cut(s) 85, 675, 1225
AsuII TTCGAA 2 cut(s) 315, 630
AvaII GGWCC 3 cut(s) 111, 378, 710
BaeGI GKGCMC 2 cut(s) 396, 700
BanII GRGCYC 3 cut(s) 310, 396, 700
BbsI GAAGAC 2 cut(s) 30, 840
Bbv12I GWGCWC 1 cut(s) 310
BbvI GCAGC 5 cut(s) 640, 686, 890, 893, 1079
BccI CCATC 6 cut(s) 221, 574, 588, 853, 1061, 1181
BceAI ACGGC 2 cut(s) 247, 655
BcgI CGANNNNNNTGC 6 cut(s) 223, 233, 257, 267, 632, 666
BciT130I CCWGG 2 cut(s) 28, 1038
BcnI CCSGG 1 cut(s) 53
BcoDI GTCTC 4 cut(s) 92, 268, 455, 1022
BfaI CTAG 2 cut(s) 671, 1131
BfmI CTRYAG 1 cut(s) 1226
BisI GCNGC 7 cut(s) 255, 593, 654, 675, 879, 882, 1093
BlsI GCNGC 7 cut(s) 256, 594, 655, 676, 880, 883, 1094
Bme1390I CCNGG 3 cut(s) 28, 53, 1038
Bme18I GGWCC 3 cut(s) 111, 378, 710
BmeRI GACNNNNNGTC 1 cut(s) 490
BmiI GGNNCC 7 cut(s) 112, 113, 295, 394, 537, 698, 762
BmrFI CCNGG 3 cut(s) 28, 53, 1038
BmrI ACTGGG 1 cut(s) 805
BmsI GCATC 2 cut(s) 877, 1047
BmuI ACTGGG 1 cut(s) 805
BpiI GAAGAC 2 cut(s) 30, 840
BpmI CTGGAG 3 cut(s) 10, 479, 747
Bpu14I TTCGAA 2 cut(s) 315, 630
BpuEI CTTGAG 1 cut(s) 389
BpuMI CCSGG 1 cut(s) 53
BsaHI GRCGYC 1 cut(s) 86
BsaI GGTCTC 1 cut(s) 92
BsaJI CCNNGG 1 cut(s) 381
Bsc4I CCNNNNNNNGG 1 cut(s) 108
Bse1I ACTGG 5 cut(s) 557, 603, 764, 800, 832
BseBI CCWGG 2 cut(s) 28, 1038
BseDI CCNNGG 1 cut(s) 381
BseGI GGATG 2 cut(s) 566, 1072
BseLI CCNNNNNNNGG 1 cut(s) 108
BseMII CTCAG 1 cut(s) 1033
BseNI ACTGG 5 cut(s) 557, 603, 764, 800, 832
BseSI GKGCMC 2 cut(s) 396, 700
BseXI GCAGC 5 cut(s) 640, 686, 890, 893, 1079
Bsh1236I CGCG 4 cut(s) 257, 278, 284, 414
BshFI GGCC 7 cut(s) 31, 56, 212, 394, 538, 579, 698
BsiHKAI GWGCWC 1 cut(s) 310
BsiSI CCGG 1 cut(s) 53
BsiWI CGTACG 1 cut(s) 258
BslFI GGGAC 2 cut(s) 124, 812
BslI CCNNNNNNNGG 1 cut(s) 108
BsmAI GTCTC 4 cut(s) 92, 268, 455, 1022
BsmBI CGTCTC 1 cut(s) 268
BsmFI GGGAC 2 cut(s) 124, 812
BsnI GGCC 7 cut(s) 31, 56, 212, 394, 538, 579, 698
Bso31I GGTCTC 1 cut(s) 92
Bsp119I TTCGAA 2 cut(s) 315, 630
Bsp120I GGGCCC 2 cut(s) 392, 696
Bsp1286I GDGCHC 3 cut(s) 310, 396, 700
Bsp143I GATC 6 cut(s) 90, 126, 331, 680, 721, 886
Bsp68I TCGCGA 1 cut(s) 284
BspACI CCGC 6 cut(s) 198, 255, 390, 414, 592, 1210
BspANI GGCC 7 cut(s) 31, 56, 212, 394, 538, 579, 698
BspCNI CTCAG 1 cut(s) 1032
BspFNI CGCG 4 cut(s) 257, 278, 284, 414
BspLI GGNNCC 7 cut(s) 112, 113, 295, 394, 537, 698, 762
BspPI GGATC 2 cut(s) 339, 729
BspQI GCTCTTC 2 cut(s) 275, 813
BspT104I TTCGAA 2 cut(s) 315, 630
BspTNI GGTCTC 1 cut(s) 92
BsrI ACTGG 5 cut(s) 557, 603, 764, 800, 832
BssECI CCNNGG 1 cut(s) 381
BssMI GATC 6 cut(s) 90, 126, 331, 680, 721, 886
BssNI GRCGYC 1 cut(s) 86
BssT1I CCWWGG 1 cut(s) 381
Bst2UI CCWGG 2 cut(s) 28, 1038
Bst4CI ACNGT 3 cut(s) 103, 503, 958
Bst6I CTCTTC 4 cut(s) 64, 275, 317, 813
BstACI GRCGYC 1 cut(s) 86
BstAPI GCANNNNNTGC 1 cut(s) 358
BstBI TTCGAA 2 cut(s) 315, 630
BstC8I GCNNGC 6 cut(s) 282, 286, 392, 876, 1163, 1208
BstDEI CTNAG 2 cut(s) 898, 1019
BstF5I GGATG 2 cut(s) 566, 1072
BstFNI CGCG 4 cut(s) 257, 278, 284, 414
BstHHI GCGC 1 cut(s) 280
BstKTI GATC 6 cut(s) 93, 129, 334, 683, 724, 889
BstMAI GTCTC 4 cut(s) 92, 268, 455, 1022
BstMBI GATC 6 cut(s) 90, 126, 331, 680, 721, 886
BstMWI GCNNNNNNNGC 3 cut(s) 358, 400, 1216
BstNI CCWGG 2 cut(s) 28, 1038
BstSCI CCNGG 3 cut(s) 26, 51, 1036
BstSFI CTRYAG 1 cut(s) 1226
BstSLI GKGCMC 2 cut(s) 396, 700
BstUI CGCG 4 cut(s) 257, 278, 284, 414
BstV1I GCAGC 5 cut(s) 640, 686, 890, 893, 1079
BstV2I GAAGAC 2 cut(s) 30, 840
BstXI CCANNNNNNTGG 3 cut(s) 587, 707, 859
BsuRI GGCC 7 cut(s) 31, 56, 212, 394, 538, 579, 698
BtgZI GCGATG 1 cut(s) 259
BtsCI GGATG 2 cut(s) 566, 1072
BtsI GCAGTG 1 cut(s) 991
BtsIMutI CAGTG 3 cut(s) 501, 963, 991
BtuMI TCGCGA 1 cut(s) 284
Cac8I GCNNGC 6 cut(s) 282, 286, 392, 876, 1163, 1208
CaiI CAGNNNCTG 1 cut(s) 871
CfoI GCGC 1 cut(s) 280
CseI GACGC 2 cut(s) 165, 229
Csp6I GTAC 4 cut(s) 169, 259, 560, 668
CviAII CATG 2 cut(s) 574, 1166
CviQI GTAC 4 cut(s) 169, 259, 560, 668
DdeI CTNAG 2 cut(s) 898, 1019
DpnI GATC 6 cut(s) 92, 128, 333, 682, 723, 888
DpnII GATC 6 cut(s) 90, 126, 331, 680, 721, 886
DraIII CACNNNGTG 2 cut(s) 358, 735
DriI GACNNNNNGTC 1 cut(s) 490
Eam1104I CTCTTC 4 cut(s) 64, 275, 317, 813
Eam1105I GACNNNNNGTC 1 cut(s) 490
EarI CTCTTC 4 cut(s) 64, 275, 317, 813
Ecl136II GAGCTC 1 cut(s) 308
Eco130I CCWWGG 1 cut(s) 381
Eco24I GRGCYC 3 cut(s) 310, 396, 700
Eco31I GGTCTC 1 cut(s) 92
Eco47I GGWCC 3 cut(s) 111, 378, 710
Eco53kI GAGCTC 1 cut(s) 308
EcoICRI GAGCTC 1 cut(s) 308
EcoO109I RGGNCCY 5 cut(s) 30, 111, 378, 393, 696
EcoRII CCWGG 2 cut(s) 26, 1036
EcoT14I CCWWGG 1 cut(s) 381
EcoT38I GRGCYC 3 cut(s) 310, 396, 700
ErhI CCWWGG 1 cut(s) 381
Esp3I CGTCTC 1 cut(s) 268
FaeI CATG 2 cut(s) 577, 1169
FalI AAGNNNNNCTT 4 cut(s) 425, 457, 1167, 1199
FaqI GGGAC 2 cut(s) 124, 812
FatI CATG 2 cut(s) 573, 1165
FauI CCCGC 3 cut(s) 191, 383, 1203
Fnu4HI GCNGC 7 cut(s) 255, 593, 654, 675, 879, 882, 1093
FokI GGATG 2 cut(s) 553, 1079
FriOI GRGCYC 3 cut(s) 310, 396, 700
Fsp4HI GCNGC 7 cut(s) 255, 593, 654, 675, 879, 882, 1093
FspBI CTAG 2 cut(s) 671, 1131
GlaI GCGC 1 cut(s) 279
GluI GCNGC 7 cut(s) 255, 593, 654, 675, 879, 882, 1093
GsuI CTGGAG 3 cut(s) 10, 479, 747
HaeIII GGCC 7 cut(s) 31, 56, 212, 394, 538, 579, 698
HapII CCGG 1 cut(s) 53
HgaI GACGC 2 cut(s) 165, 229
HhaI GCGC 1 cut(s) 280
Hin1I GRCGYC 1 cut(s) 86
Hin1II CATG 2 cut(s) 577, 1169
Hin6I GCGC 1 cut(s) 278
HinP1I GCGC 1 cut(s) 278
HincII GTYRAC 1 cut(s) 106
HindII GTYRAC 1 cut(s) 106
HinfI GANTC 2 cut(s) 800, 1023
HpaII CCGG 1 cut(s) 53
HphI GGTGA 3 cut(s) 85, 675, 1225
Hpy166II GTNNAC 3 cut(s) 106, 499, 1142
Hpy188I TCNGA 6 cut(s) 17, 181, 336, 469, 726, 1022
Hpy188III TCNNGA 5 cut(s) 124, 283, 373, 458, 1184
Hpy8I GTNNAC 3 cut(s) 106, 499, 1142
Hpy99I CGWCG 4 cut(s) 67, 88, 91, 245
HpyAV CCTTC 3 cut(s) 284, 712, 1078
HpyCH4III ACNGT 3 cut(s) 103, 503, 958
HpyCH4IV ACGT 4 cut(s) 86, 185, 261, 744
HpyCH4V TGCA 7 cut(s) 361, 738, 878, 936, 1031, 1060, 1161
HpyF10VI GCNNNNNNNGC 3 cut(s) 358, 400, 1216
HpyF3I CTNAG 2 cut(s) 898, 1019
HpySE526I ACGT 4 cut(s) 86, 185, 261, 744
Hsp92I GRCGYC 1 cut(s) 86
Hsp92II CATG 2 cut(s) 577, 1169
HspAI GCGC 1 cut(s) 278
KflI GGGWCCC 1 cut(s) 111
Kzo9I GATC 6 cut(s) 90, 126, 331, 680, 721, 886
LguI GCTCTTC 2 cut(s) 275, 813
LmnI GCTCC 1 cut(s) 766
Lsp1109I GCAGC 5 cut(s) 640, 686, 890, 893, 1079
LweI GCATC 2 cut(s) 877, 1047
MaeI CTAG 2 cut(s) 671, 1131
MaeII ACGT 4 cut(s) 86, 185, 261, 744
MaeIII GTNAC 4 cut(s) 428, 522, 1070, 1193
MalI GATC 6 cut(s) 92, 128, 333, 682, 723, 888
MboI GATC 6 cut(s) 90, 126, 331, 680, 721, 886
MboII GAAGA 8 cut(s) 30, 33, 51, 262, 304, 433, 830, 840
MhlI GDGCHC 3 cut(s) 310, 396, 700
MluCI AATT 4 cut(s) 317, 625, 633, 645
MlyI GAGTC 1 cut(s) 794
MmeI TCCRAC 1 cut(s) 864
MroXI GAANNNNTTC 1 cut(s) 1179
MseI TTAA 3 cut(s) 189, 477, 771
MslI CAYNNNNRTG 2 cut(s) 857, 1170
MspA1I CMGCKG 1 cut(s) 1003
MspI CCGG 1 cut(s) 53
MspR9I CCNGG 3 cut(s) 28, 53, 1038
MvaI CCWGG 2 cut(s) 28, 1038
MvnI CGCG 4 cut(s) 257, 278, 284, 414
MwoI GCNNNNNNNGC 3 cut(s) 358, 400, 1216
NciI CCSGG 1 cut(s) 53
NdeII GATC 6 cut(s) 90, 126, 331, 680, 721, 886
NlaIII CATG 2 cut(s) 577, 1169
NlaIV GGNNCC 7 cut(s) 112, 113, 295, 394, 537, 698, 762
NmuCI GTSAC 2 cut(s) 522, 1193
NruI TCGCGA 1 cut(s) 284
NspV TTCGAA 2 cut(s) 315, 630
PciSI GCTCTTC 2 cut(s) 275, 813
PcsI WCGNNNNNNNCGW 2 cut(s) 68, 237
PdmI GAANNNNTTC 1 cut(s) 1179
PfeI GAWTC 1 cut(s) 1023
Pfl23II CGTACG 1 cut(s) 258
PkrI GCNGC 7 cut(s) 256, 594, 655, 676, 880, 883, 1094
PleI GAGTC 1 cut(s) 794
PpsI GAGTC 1 cut(s) 794
PpuMI RGGWCCY 2 cut(s) 111, 378
Psp124BI GAGCTC 1 cut(s) 310
Psp1406I AACGTT 1 cut(s) 744
Psp5II RGGWCCY 2 cut(s) 111, 378
Psp6I CCWGG 2 cut(s) 26, 1036
PspGI CCWGG 2 cut(s) 26, 1036
PspLI CGTACG 1 cut(s) 258
PspN4I GGNNCC 7 cut(s) 112, 113, 295, 394, 537, 698, 762
PspOMI GGGCCC 2 cut(s) 392, 696
PspPPI RGGWCCY 2 cut(s) 111, 378
PstNI CAGNNNCTG 1 cut(s) 871
PvuII CAGCTG 1 cut(s) 1003
RruI TCGCGA 1 cut(s) 284
RsaI GTAC 4 cut(s) 170, 260, 561, 669
RsaNI GTAC 4 cut(s) 169, 259, 560, 668
RseI CAYNNNNRTG 2 cut(s) 857, 1170
SacI GAGCTC 1 cut(s) 310
SapI GCTCTTC 2 cut(s) 275, 813
SaqAI TTAA 3 cut(s) 189, 477, 771
SatI GCNGC 7 cut(s) 255, 593, 654, 675, 879, 882, 1093
Sau3AI GATC 6 cut(s) 90, 126, 331, 680, 721, 886
SchI GAGTC 1 cut(s) 794
ScrFI CCNGG 3 cut(s) 28, 53, 1038
SduI GDGCHC 3 cut(s) 310, 396, 700
SfaNI GCATC 2 cut(s) 877, 1047
SfcI CTRYAG 1 cut(s) 1226
SfuI TTCGAA 2 cut(s) 315, 630
SinI GGWCC 3 cut(s) 111, 378, 710
SmiMI CAYNNNNRTG 2 cut(s) 857, 1170
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
Sse9I AATT 4 cut(s) 317, 625, 633, 645
SsiI CCGC 6 cut(s) 198, 255, 390, 414, 592, 1210
SspMI CTAG 2 cut(s) 671, 1131
SstI GAGCTC 1 cut(s) 310
StyD4I CCNGG 3 cut(s) 26, 51, 1036
StyI CCWWGG 1 cut(s) 381
TaaI ACNGT 3 cut(s) 103, 503, 958
TaiI ACGT 4 cut(s) 89, 188, 264, 747
TaqI TCGA 6 cut(s) 83, 89, 243, 315, 630, 679
TasI AATT 4 cut(s) 317, 625, 633, 645
TatI WGTACW 1 cut(s) 168
TauI GCSGC 2 cut(s) 257, 595
TfiI GAWTC 1 cut(s) 1023
Tru1I TTAA 3 cut(s) 189, 477, 771
Tru9I TTAA 3 cut(s) 189, 477, 771
TscAI CASTG 3 cut(s) 501, 963, 998
TseFI GTSAC 2 cut(s) 522, 1193
TseI GCWGC 5 cut(s) 653, 674, 878, 881, 1092
Tsp45I GTSAC 2 cut(s) 522, 1193
TspDTI ATGAA 6 cut(s) 33, 262, 731, 773, 778, 1188
TspGWI ACGGA 2 cut(s) 545, 1079
TspRI CASTG 3 cut(s) 501, 963, 998
VpaK11BI GGWCC 3 cut(s) 111, 378, 710
XapI RAATTY 2 cut(s) 625, 645
XmnI GAANNNNTTC 1 cut(s) 1179
XspI CTAG 2 cut(s) 671, 1131
ZraI GACGTC 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.