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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13390 AT5G13390 |
| fragaria_vesca | FvH4_4g22440 |
| malus_domestica | MD13G1132200.v1.1 MD16G1142500.v1.1 |
| prunus_persica | Prupe.1G213300_v2.0.a1 |
| pyrus_communis | pycom13g11500 pycom16g11290 |
| rosa_chinensis | RchiOBHm_Chr4g0402251 RchiOBHm_Chr4g0428701 |
| rosa_laevigata | RLG00000007134 |
| rosa_multiflora | Rmu_sc0003316.1_g000007 |
| rosa_roxburghii | Rroxscaffold_5G00370370 |
| rosa_rugosa | Rorug04G0227300 |
| rosa_samantha | Rh4AG284500 Rh4BG290500 Rh4CG306700 Rh4DG288100 Rh5DG506600 |
| rosa_wichuraiana | Rw0G020630 Rw4G015480 Rw4G024710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1844 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2107 |
| Acc36I | ACCTGC | 1 cut(s) | 1844 |
| AccB1I | GGYRCC | 4 cut(s) | 329, 977, 1054, 2932 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1937, 2840 |
| AccI | GTMKAC | 1 cut(s) | 306 |
| AccII | CGCG | 7 cut(s) | 25, 399, 530, 845, 920, 957, 3083 |
| AccIII | TCCGGA | 1 cut(s) | 3109 |
| AclWI | GGATC | 4 cut(s) | 1368, 1662, 2080, 2509 |
| AcoI | YGGCCR | 3 cut(s) | 612, 1501, 2186 |
| AcsI | RAATTY | 1 cut(s) | 3133 |
| AcuI | CTGAAG | 3 cut(s) | 367, 2321, 3293 |
| AcyI | GRCGYC | 3 cut(s) | 309, 342, 471 |
| AfaI | GTAC | 9 cut(s) | 41, 626, 713, 1046, 1589, 1986, 2330, 2428, 3344 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 912, 1838, 1911, 1937, 2041, 2840 |
| AflIII | ACRYGT | 2 cut(s) | 1691, 2353 |
| AgeI | ACCGGT | 1 cut(s) | 2106 |
| AjiI | CACGTC | 2 cut(s) | 1692, 3268 |
| AjnI | CCWGG | 7 cut(s) | 584, 1444, 1947, 2825, 2928, 2955, 3312 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1412, 1444 |
| AleI | CACNNNNGTG | 2 cut(s) | 260, 720 |
| Alw21I | GWGCWC | 1 cut(s) | 62 |
| Alw26I | GTCTC | 4 cut(s) | 298, 446, 484, 859 |
| AlwI | GGATC | 4 cut(s) | 1368, 1662, 2080, 2509 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 857 |
| Ama87I | CYCGRG | 1 cut(s) | 912 |
| Aor13HI | TCCGGA | 1 cut(s) | 3109 |
| AoxI | GGCC | 7 cut(s) | 283, 588, 612, 1501, 2186, 2494, 3315 |
| ApoI | RAATTY | 1 cut(s) | 3133 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2470, 2502, 2951, 2983 |
| AseI | ATTAAT | 1 cut(s) | 2669 |
| AsiGI | ACCGGT | 1 cut(s) | 2106 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1397 |
| AspA2I | CCTAGG | 1 cut(s) | 280 |
| AspLEI | GCGC | 7 cut(s) | 230, 401, 449, 532, 920, 922, 957 |
| AspS9I | GGNCC | 6 cut(s) | 143, 588, 727, 2494, 3107, 3316 |
| AsuC2I | CCSGG | 2 cut(s) | 913, 914 |
| AvaI | CYCGRG | 1 cut(s) | 912 |
| AvaII | GGWCC | 3 cut(s) | 143, 727, 3107 |
| AvrII | CCTAGG | 1 cut(s) | 280 |
| BalI | TGGCCA | 2 cut(s) | 614, 2188 |
| BanI | GGYRCC | 4 cut(s) | 329, 977, 1054, 2932 |
| BanII | GRGCYC | 1 cut(s) | 3294 |
| BbsI | GAAGAC | 3 cut(s) | 115, 1930, 3069 |
| Bbv12I | GWGCWC | 1 cut(s) | 62 |
| BbvCI | CCTCAGC | 1 cut(s) | 2817 |
| BccI | CCATC | 7 cut(s) | 602, 1369, 1931, 1939, 2197, 2422, 3256 |
| BceAI | ACGGC | 5 cut(s) | 194, 587, 733, 965, 1869 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 934, 968 |
| BciT130I | CCWGG | 7 cut(s) | 586, 1446, 1949, 2827, 2930, 2957, 3314 |
| BcnI | CCSGG | 2 cut(s) | 913, 914 |
| BcoDI | GTCTC | 4 cut(s) | 298, 446, 484, 859 |
| BfuAI | ACCTGC | 1 cut(s) | 1844 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2185, 2194 |
| BglII | AGATCT | 1 cut(s) | 152 |
| BlnI | CCTAGG | 1 cut(s) | 280 |
| BlpI | GCTNAGC | 1 cut(s) | 1707 |
| BmcAI | AGTACT | 1 cut(s) | 2330 |
| Bme1390I | CCNGG | 9 cut(s) | 586, 913, 914, 1446, 1949, 2827, 2930, 2957, 3314 |
| Bme18I | GGWCC | 3 cut(s) | 143, 727, 3107 |
| BmeT110I | CYCGRG | 1 cut(s) | 912 |
| BmgBI | CACGTC | 2 cut(s) | 1692, 3268 |
| BmgT120I | GGNCC | 6 cut(s) | 143, 588, 727, 2494, 3107, 3316 |
| BmiI | GGNNCC | 7 cut(s) | 82, 331, 729, 979, 1056, 2824, 2934 |
| BmrFI | CCNGG | 9 cut(s) | 586, 913, 914, 1446, 1949, 2827, 2930, 2957, 3314 |
| BmrI | ACTGGG | 3 cut(s) | 2064, 2084, 3313 |
| BmsI | GCATC | 7 cut(s) | 687, 777, 1083, 1135, 2021, 2798, 2820 |
| BmuI | ACTGGG | 3 cut(s) | 2064, 2084, 3313 |
| BpiI | GAAGAC | 3 cut(s) | 115, 1930, 3069 |
| BpmI | CTGGAG | 6 cut(s) | 470, 779, 1131, 1218, 1892, 2663 |
| Bpu10I | CCTNAGC | 2 cut(s) | 98, 2817 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1707 |
| BpuEI | CTTGAG | 4 cut(s) | 91, 143, 692, 2407 |
| BpuMI | CCSGG | 2 cut(s) | 913, 914 |
| BsaBI | GATNNNNATC | 1 cut(s) | 503 |
| BsaHI | GRCGYC | 3 cut(s) | 309, 342, 471 |
| BsaI | GGTCTC | 3 cut(s) | 298, 446, 484 |
| BsaWI | WCCGGW | 3 cut(s) | 326, 2106, 3109 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1191, 1221, 2636, 2666 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 912, 1838, 1911, 1937, 2041, 2840 |
| Bse118I | RCCGGY | 3 cut(s) | 259, 1250, 2106 |
| Bse1I | ACTGG | 9 cut(s) | 487, 762, 1819, 1909, 2059, 2090, 2463, 2701, 3319 |
| Bse3DI | GCAATG | 2 cut(s) | 82, 1508 |
| Bse8I | GATNNNNATC | 1 cut(s) | 503 |
| BseAI | TCCGGA | 1 cut(s) | 3109 |
| BseBI | CCWGG | 7 cut(s) | 586, 1446, 1949, 2827, 2930, 2957, 3314 |
| BseGI | GGATG | 7 cut(s) | 744, 768, 839, 1380, 1582, 2789, 2835 |
| BseJI | GATNNNNATC | 1 cut(s) | 503 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 912, 1838, 1911, 1937, 2041, 2840 |
| BseMI | GCAATG | 2 cut(s) | 82, 1508 |
| BseMII | CTCAG | 4 cut(s) | 132, 2316, 2808, 3363 |
| BseNI | ACTGG | 9 cut(s) | 487, 762, 1819, 1909, 2059, 2090, 2463, 2701, 3319 |
| BsePI | GCGCGC | 1 cut(s) | 918 |
| BseRI | GAGGAG | 6 cut(s) | 379, 400, 533, 562, 791, 3134 |
| BseYI | CCCAGC | 2 cut(s) | 110, 3161 |
| BsgI | GTGCAG | 1 cut(s) | 1125 |
| Bsh1236I | CGCG | 7 cut(s) | 25, 399, 530, 845, 920, 957, 3083 |
| Bsh1285I | CGRYCG | 1 cut(s) | 522 |
| BshFI | GGCC | 7 cut(s) | 285, 590, 614, 1503, 2188, 2496, 3317 |
| BshNI | GGYRCC | 4 cut(s) | 329, 977, 1054, 2932 |
| BshTI | ACCGGT | 1 cut(s) | 2106 |
| BsiEI | CGRYCG | 1 cut(s) | 522 |
| BsiHKAI | GWGCWC | 1 cut(s) | 62 |
| BsiHKCI | CYCGRG | 1 cut(s) | 912 |
| BsiSI | CCGG | 7 cut(s) | 11, 260, 327, 913, 1251, 2107, 3110 |
| BslFI | GGGAC | 4 cut(s) | 206, 713, 1372, 2999 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 912, 1838, 1911, 1937, 2041, 2840 |
| BsmAI | GTCTC | 4 cut(s) | 298, 446, 484, 859 |
| BsmFI | GGGAC | 4 cut(s) | 206, 713, 1372, 2999 |
| BsmI | GAATGC | 1 cut(s) | 960 |
| BsnI | GGCC | 7 cut(s) | 285, 590, 614, 1503, 2188, 2496, 3317 |
| Bso31I | GGTCTC | 3 cut(s) | 298, 446, 484 |
| BsoBI | CYCGRG | 1 cut(s) | 912 |
| Bsp1286I | GDGCHC | 2 cut(s) | 62, 3294 |
| Bsp13I | TCCGGA | 1 cut(s) | 3109 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1707 |
| Bsp19I | CCATGG | 1 cut(s) | 1158 |
| BspANI | GGCC | 7 cut(s) | 285, 590, 614, 1503, 2188, 2496, 3317 |
| BspCNI | CTCAG | 4 cut(s) | 131, 2317, 2809, 3362 |
| BspEI | TCCGGA | 1 cut(s) | 3109 |
| BspFNI | CGCG | 7 cut(s) | 25, 399, 530, 845, 920, 957, 3083 |
| BspLI | GGNNCC | 7 cut(s) | 82, 331, 729, 979, 1056, 2824, 2934 |
| BspMI | ACCTGC | 1 cut(s) | 1844 |
| BspPI | GGATC | 4 cut(s) | 1368, 1662, 2080, 2509 |
| BspT107I | GGYRCC | 4 cut(s) | 329, 977, 1054, 2932 |
| BspTNI | GGTCTC | 3 cut(s) | 298, 446, 484 |
| BsrDI | GCAATG | 2 cut(s) | 82, 1508 |
| BsrFI | RCCGGY | 3 cut(s) | 259, 1250, 2106 |
| BsrI | ACTGG | 9 cut(s) | 487, 762, 1819, 1909, 2059, 2090, 2463, 2701, 3319 |
| BssAI | RCCGGY | 3 cut(s) | 259, 1250, 2106 |
| BssHII | GCGCGC | 1 cut(s) | 918 |
| BssNI | GRCGYC | 3 cut(s) | 309, 342, 471 |
| BssT1I | CCWWGG | 4 cut(s) | 280, 1158, 1832, 2441 |
| Bst2UI | CCWGG | 7 cut(s) | 586, 1446, 1949, 2827, 2930, 2957, 3314 |
| Bst4CI | ACNGT | 4 cut(s) | 977, 1785, 2785, 2857 |
| Bst6I | CTCTTC | 9 cut(s) | 551, 656, 688, 794, 809, 1277, 2474, 2547, 2607 |
| BstACI | GRCGYC | 3 cut(s) | 309, 342, 471 |
| BstC8I | GCNNGC | 8 cut(s) | 58, 257, 553, 920, 1252, 1381, 1713, 2835 |
| BstDEI | CTNAG | 8 cut(s) | 98, 118, 936, 1707, 2325, 2817, 3295, 3349 |
| BstDSI | CCRYGG | 4 cut(s) | 23, 715, 843, 1158 |
| BstEII | GGTNACC | 1 cut(s) | 1861 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1836 |
| BstF5I | GGATG | 7 cut(s) | 744, 768, 839, 1380, 1582, 2789, 2835 |
| BstFNI | CGCG | 7 cut(s) | 25, 399, 530, 845, 920, 957, 3083 |
| BstHHI | GCGC | 7 cut(s) | 230, 401, 449, 532, 920, 922, 957 |
| BstMAI | GTCTC | 4 cut(s) | 298, 446, 484, 859 |
| BstMCI | CGRYCG | 1 cut(s) | 522 |
| BstNI | CCWGG | 7 cut(s) | 586, 1446, 1949, 2827, 2930, 2957, 3314 |
| BstNSI | RCATGY | 4 cut(s) | 1387, 1438, 1853, 2357 |
| BstPI | GGTNACC | 1 cut(s) | 1861 |
| BstSCI | CCNGG | 9 cut(s) | 584, 911, 912, 1444, 1947, 2825, 2928, 2955, 3312 |
| BstUI | CGCG | 7 cut(s) | 25, 399, 530, 845, 920, 957, 3083 |
| BstV2I | GAAGAC | 3 cut(s) | 115, 1930, 3069 |
| BstX2I | RGATCY | 2 cut(s) | 152, 1360 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1037, 2097, 2293 |
| BstYI | RGATCY | 2 cut(s) | 152, 1360 |
| BsuRI | GGCC | 7 cut(s) | 285, 590, 614, 1503, 2188, 2496, 3317 |
| BtgI | CCRYGG | 4 cut(s) | 23, 715, 843, 1158 |
| BtgZI | GCGATG | 1 cut(s) | 796 |
| BtrI | CACGTC | 2 cut(s) | 1692, 3268 |
| BtsCI | GGATG | 7 cut(s) | 744, 768, 839, 1380, 1582, 2789, 2835 |
| BtsI | GCAGTG | 1 cut(s) | 1167 |
| BtsIMutI | CAGTG | 3 cut(s) | 755, 1167, 1916 |
| BveI | ACCTGC | 1 cut(s) | 1844 |
| Cac8I | GCNNGC | 8 cut(s) | 58, 257, 553, 920, 1252, 1381, 1713, 2835 |
| CaiI | CAGNNNCTG | 1 cut(s) | 857 |
| CfoI | GCGC | 7 cut(s) | 230, 401, 449, 532, 920, 922, 957 |
| Cfr10I | RCCGGY | 3 cut(s) | 259, 1250, 2106 |
| Cfr13I | GGNCC | 6 cut(s) | 143, 588, 727, 2494, 3107, 3316 |
| Cfr42I | CCGCGG | 2 cut(s) | 26, 846 |
| Cfr9I | CCCGGG | 1 cut(s) | 912 |
| CseI | GACGC | 4 cut(s) | 317, 331, 460, 2969 |
| Csp6I | GTAC | 9 cut(s) | 40, 625, 712, 1045, 1588, 1985, 2329, 2427, 3343 |
| CspAI | ACCGGT | 1 cut(s) | 2106 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1602, 1637 |
| CviQI | GTAC | 9 cut(s) | 40, 625, 712, 1045, 1588, 1985, 2329, 2427, 3343 |
| DdeI | CTNAG | 8 cut(s) | 98, 118, 936, 1707, 2325, 2817, 3295, 3349 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2107 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2107 |
| EaeI | YGGCCR | 3 cut(s) | 612, 1501, 2186 |
| Eam1104I | CTCTTC | 9 cut(s) | 551, 656, 688, 794, 809, 1277, 2474, 2547, 2607 |
| EarI | CTCTTC | 9 cut(s) | 551, 656, 688, 794, 809, 1277, 2474, 2547, 2607 |
| EciI | GGCGGA | 3 cut(s) | 150, 589, 1050 |
| Eco130I | CCWWGG | 4 cut(s) | 280, 1158, 1832, 2441 |
| Eco147I | AGGCCT | 1 cut(s) | 285 |
| Eco24I | GRGCYC | 1 cut(s) | 3294 |
| Eco31I | GGTCTC | 3 cut(s) | 298, 446, 484 |
| Eco32I | GATATC | 1 cut(s) | 1140 |
| Eco47I | GGWCC | 3 cut(s) | 143, 727, 3107 |
| Eco57I | CTGAAG | 3 cut(s) | 367, 2321, 3293 |
| Eco88I | CYCGRG | 1 cut(s) | 912 |
| Eco91I | GGTNACC | 1 cut(s) | 1861 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1836 |
| EcoO109I | RGGNCCY | 1 cut(s) | 727 |
| EcoO65I | GGTNACC | 1 cut(s) | 1861 |
| EcoRII | CCWGG | 7 cut(s) | 584, 1444, 1947, 2825, 2928, 2955, 3312 |
| EcoRV | GATATC | 1 cut(s) | 1140 |
| EcoT14I | CCWWGG | 4 cut(s) | 280, 1158, 1832, 2441 |
| EcoT22I | ATGCAT | 1 cut(s) | 1510 |
| EcoT38I | GRGCYC | 1 cut(s) | 3294 |
| ErhI | CCWWGG | 4 cut(s) | 280, 1158, 1832, 2441 |
| FaqI | GGGAC | 4 cut(s) | 206, 713, 1372, 2999 |
| FauI | CCCGC | 1 cut(s) | 3076 |
| FauNDI | CATATG | 1 cut(s) | 3056 |
| FblI | GTMKAC | 1 cut(s) | 306 |
| FokI | GGATG | 7 cut(s) | 731, 755, 826, 1387, 1589, 2776, 2842 |
| FriOI | GRGCYC | 1 cut(s) | 3294 |
| GlaI | GCGC | 7 cut(s) | 229, 400, 448, 531, 919, 921, 956 |
| GsaI | CCCAGC | 2 cut(s) | 114, 3165 |
| GsuI | CTGGAG | 6 cut(s) | 470, 779, 1131, 1218, 1892, 2663 |
| HaeIII | GGCC | 7 cut(s) | 285, 590, 614, 1503, 2188, 2496, 3317 |
| HapII | CCGG | 7 cut(s) | 11, 260, 327, 913, 1251, 2107, 3110 |
| HgaI | GACGC | 4 cut(s) | 317, 331, 460, 2969 |
| HhaI | GCGC | 7 cut(s) | 230, 401, 449, 532, 920, 922, 957 |
| Hin1I | GRCGYC | 3 cut(s) | 309, 342, 471 |
| Hin6I | GCGC | 7 cut(s) | 228, 399, 447, 530, 918, 920, 955 |
| HinP1I | GCGC | 7 cut(s) | 228, 399, 447, 530, 918, 920, 955 |
| HincII | GTYRAC | 1 cut(s) | 307 |
| HindII | GTYRAC | 1 cut(s) | 307 |
| HinfI | GANTC | 8 cut(s) | 116, 204, 499, 940, 1531, 1684, 2700, 3212 |
| HpaII | CCGG | 7 cut(s) | 11, 260, 327, 913, 1251, 2107, 3110 |
| Hpy166II | GTNNAC | 4 cut(s) | 307, 582, 1985, 3192 |
| Hpy8I | GTNNAC | 4 cut(s) | 307, 582, 1985, 3192 |
| Hpy99I | CGWCG | 5 cut(s) | 215, 308, 311, 608, 1662 |
| HpyCH4III | ACNGT | 4 cut(s) | 977, 1785, 2785, 2857 |
| HpyCH4IV | ACGT | 2 cut(s) | 1691, 3267 |
| HpyF3I | CTNAG | 8 cut(s) | 98, 118, 936, 1707, 2325, 2817, 3295, 3349 |
| HpySE526I | ACGT | 2 cut(s) | 1691, 3267 |
| Hsp92I | GRCGYC | 3 cut(s) | 309, 342, 471 |
| HspAI | GCGC | 7 cut(s) | 228, 399, 447, 530, 918, 920, 955 |
| Kpn2I | TCCGGA | 1 cut(s) | 3109 |
| KroI | GCCGGC | 1 cut(s) | 1250 |
| KroNI | GCCGGC | 1 cut(s) | 1252 |
| KspI | CCGCGG | 2 cut(s) | 26, 846 |
| LmnI | GCTCC | 9 cut(s) | 13, 86, 392, 489, 1112, 1160, 1199, 1320, 2822 |
| LweI | GCATC | 7 cut(s) | 687, 777, 1083, 1135, 2021, 2798, 2820 |
| MaeII | ACGT | 2 cut(s) | 1691, 3267 |
| MflI | RGATCY | 2 cut(s) | 152, 1360 |
| MhlI | GDGCHC | 2 cut(s) | 62, 3294 |
| MlsI | TGGCCA | 2 cut(s) | 614, 2188 |
| MluNI | TGGCCA | 2 cut(s) | 614, 2188 |
| MlyI | GAGTC | 2 cut(s) | 110, 3206 |
| Mox20I | TGGCCA | 2 cut(s) | 614, 2188 |
| Mph1103I | ATGCAT | 1 cut(s) | 1510 |
| MroI | TCCGGA | 1 cut(s) | 3109 |
| MroNI | GCCGGC | 1 cut(s) | 1250 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1397 |
| MscI | TGGCCA | 2 cut(s) | 614, 2188 |
| MseI | TTAA | 6 cut(s) | 2121, 2253, 2508, 2669, 3240, 3356 |
| MslI | CAYNNNNRTG | 6 cut(s) | 260, 720, 965, 1052, 1854, 2291 |
| Msp20I | TGGCCA | 2 cut(s) | 614, 2188 |
| MspA1I | CMGCKG | 6 cut(s) | 25, 845, 952, 1109, 1237, 2231 |
| MspI | CCGG | 7 cut(s) | 11, 260, 327, 913, 1251, 2107, 3110 |
| MspR9I | CCNGG | 9 cut(s) | 586, 913, 914, 1446, 1949, 2827, 2930, 2957, 3314 |
| Mva1269I | GAATGC | 1 cut(s) | 960 |
| MvaI | CCWGG | 7 cut(s) | 586, 1446, 1949, 2827, 2930, 2957, 3314 |
| MvnI | CGCG | 7 cut(s) | 25, 399, 530, 845, 920, 957, 3083 |
| NaeI | GCCGGC | 1 cut(s) | 1252 |
| NciI | CCSGG | 2 cut(s) | 913, 914 |
| NcoI | CCATGG | 1 cut(s) | 1158 |
| NdeI | CATATG | 1 cut(s) | 3056 |
| NgoMIV | GCCGGC | 1 cut(s) | 1250 |
| NlaIV | GGNNCC | 7 cut(s) | 82, 331, 729, 979, 1056, 2824, 2934 |
| NmeAIII | GCCGAG | 3 cut(s) | 228, 475, 2110 |
| NmuCI | GTSAC | 6 cut(s) | 931, 1081, 1330, 1609, 2368, 2476 |
| NsiI | ATGCAT | 1 cut(s) | 1510 |
| NspI | RCATGY | 4 cut(s) | 1387, 1438, 1853, 2357 |
| OliI | CACNNNNGTG | 2 cut(s) | 260, 720 |
| PaqCI | CACCTGC | 1 cut(s) | 1844 |
| PauI | GCGCGC | 1 cut(s) | 918 |
| PceI | AGGCCT | 1 cut(s) | 285 |
| PciI | ACATGT | 1 cut(s) | 2353 |
| PctI | GAATGC | 1 cut(s) | 960 |
| PdiI | GCCGGC | 1 cut(s) | 1252 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1397 |
| PfeI | GAWTC | 6 cut(s) | 204, 499, 940, 1531, 1684, 2700 |
| PflFI | GACNNNGTC | 1 cut(s) | 119 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1937, 2840 |
| PinAI | ACCGGT | 1 cut(s) | 2106 |
| Ple19I | CGATCG | 1 cut(s) | 522 |
| PleI | GAGTC | 2 cut(s) | 110, 3206 |
| PpsI | GAGTC | 2 cut(s) | 110, 3206 |
| PpuMI | RGGWCCY | 1 cut(s) | 727 |
| PscI | ACATGT | 1 cut(s) | 2353 |
| PshBI | ATTAAT | 1 cut(s) | 2669 |
| Psp5II | RGGWCCY | 1 cut(s) | 727 |
| Psp6I | CCWGG | 7 cut(s) | 584, 1444, 1947, 2825, 2928, 2955, 3312 |
| PspEI | GGTNACC | 1 cut(s) | 1861 |
| PspFI | CCCAGC | 2 cut(s) | 110, 3161 |
| PspGI | CCWGG | 7 cut(s) | 584, 1444, 1947, 2825, 2928, 2955, 3312 |
| PspN4I | GGNNCC | 7 cut(s) | 82, 331, 729, 979, 1056, 2824, 2934 |
| PspPI | GGNCC | 6 cut(s) | 143, 588, 727, 2494, 3107, 3316 |
| PspPPI | RGGWCCY | 1 cut(s) | 727 |
| PstNI | CAGNNNCTG | 1 cut(s) | 857 |
| PsuI | RGATCY | 2 cut(s) | 152, 1360 |
| PsyI | GACNNNGTC | 1 cut(s) | 119 |
| PteI | GCGCGC | 1 cut(s) | 918 |
| PvuI | CGATCG | 1 cut(s) | 522 |
| PvuII | CAGCTG | 3 cut(s) | 952, 1109, 2231 |
| RsaI | GTAC | 9 cut(s) | 41, 626, 713, 1046, 1589, 1986, 2330, 2428, 3344 |
| RsaNI | GTAC | 9 cut(s) | 40, 625, 712, 1045, 1588, 1985, 2329, 2427, 3343 |
| RseI | CAYNNNNRTG | 6 cut(s) | 260, 720, 965, 1052, 1854, 2291 |
| SacII | CCGCGG | 2 cut(s) | 26, 846 |
| SalI | GTCGAC | 1 cut(s) | 305 |
| SaqAI | TTAA | 6 cut(s) | 2121, 2253, 2508, 2669, 3240, 3356 |
| Sau96I | GGNCC | 6 cut(s) | 143, 588, 727, 2494, 3107, 3316 |
| ScaI | AGTACT | 1 cut(s) | 2330 |
| SchI | GAGTC | 2 cut(s) | 110, 3206 |
| ScrFI | CCNGG | 9 cut(s) | 586, 913, 914, 1446, 1949, 2827, 2930, 2957, 3314 |
| SduI | GDGCHC | 2 cut(s) | 62, 3294 |
| SfaNI | GCATC | 7 cut(s) | 687, 777, 1083, 1135, 2021, 2798, 2820 |
| Sfr303I | CCGCGG | 2 cut(s) | 26, 846 |
| SgrAI | CRCCGGYG | 1 cut(s) | 259 |
| SgrBI | CCGCGG | 2 cut(s) | 26, 846 |
| SgrDI | CGTCGACG | 1 cut(s) | 305 |
| SinI | GGWCC | 3 cut(s) | 143, 727, 3107 |
| SmaI | CCCGGG | 1 cut(s) | 914 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 260, 720, 965, 1052, 1854, 2291 |
| SmlI | CTYRAG | 4 cut(s) | 70, 158, 707, 2422 |
| SmoI | CTYRAG | 4 cut(s) | 70, 158, 707, 2422 |
| SseBI | AGGCCT | 1 cut(s) | 285 |
| SspI | AATATT | 2 cut(s) | 1369, 2922 |
| StuI | AGGCCT | 1 cut(s) | 285 |
| StyD4I | CCNGG | 9 cut(s) | 584, 911, 912, 1444, 1947, 2825, 2928, 2955, 3312 |
| StyI | CCWWGG | 4 cut(s) | 280, 1158, 1832, 2441 |
| TaaI | ACNGT | 4 cut(s) | 977, 1785, 2785, 2857 |
| TaiI | ACGT | 2 cut(s) | 1694, 3270 |
| TaqI | TCGA | 9 cut(s) | 243, 306, 507, 518, 534, 908, 1244, 1660, 2732 |
| TaqII | GACCGA | 1 cut(s) | 2597 |
| TatI | WGTACW | 3 cut(s) | 2328, 2426, 3342 |
| TauI | GCSGC | 8 cut(s) | 10, 233, 255, 428, 437, 569, 848, 960 |
| TfiI | GAWTC | 6 cut(s) | 204, 499, 940, 1531, 1684, 2700 |
| Tru1I | TTAA | 6 cut(s) | 2121, 2253, 2508, 2669, 3240, 3356 |
| Tru9I | TTAA | 6 cut(s) | 2121, 2253, 2508, 2669, 3240, 3356 |
| TscAI | CASTG | 3 cut(s) | 762, 1174, 1916 |
| TseFI | GTSAC | 6 cut(s) | 931, 1081, 1330, 1609, 2368, 2476 |
| Tsp45I | GTSAC | 6 cut(s) | 931, 1081, 1330, 1609, 2368, 2476 |
| TspDTI | ATGAA | 7 cut(s) | 750, 868, 986, 1281, 1337, 1719, 1841 |
| TspGWI | ACGGA | 3 cut(s) | 23, 27, 3224 |
| TspMI | CCCGGG | 1 cut(s) | 912 |
| TspRI | CASTG | 3 cut(s) | 762, 1174, 1916 |
| Tth111I | GACNNNGTC | 1 cut(s) | 119 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1937, 2840 |
| VpaK11BI | GGWCC | 3 cut(s) | 143, 727, 3107 |
| VspI | ATTAAT | 1 cut(s) | 2669 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1836 |
| XapI | RAATTY | 1 cut(s) | 3133 |
| XbaI | TCTAGA | 2 cut(s) | 149, 3332 |
| XceI | RCATGY | 4 cut(s) | 1387, 1438, 1853, 2357 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1916, 2257 |
| XmaI | CCCGGG | 1 cut(s) | 912 |
| XmaJI | CCTAGG | 1 cut(s) | 280 |
| XmiI | GTMKAC | 1 cut(s) | 306 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1397 |
| ZrmI | AGTACT | 1 cut(s) | 2330 |
| Zsp2I | ATGCAT | 1 cut(s) | 1510 |