Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0009466

Physical Location & Seq

Genomic Coordinates Reverse (-)

7818443 .. 7823043

Gene Structure 4601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g11290.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3360 bp

ATGATGCCGCCGGAGCTTCAGCCGCGGTTCTTCCGTCCGAACATCACCCCTTCGGCGAGCACTTCCTCCTTGGGCAACGGCTCCCCAAACCCTAGCTCCAGCCTCAACGACTCAATCTTCAACAATGGTGGCGGTCCTTCTAGATCTCTCAAGAACTCCCGATTCTCCCCCTCCTCCTTCGCCCACAACGCCCGAATCGCCGTTGCACTCTTCCCCTGCGCCGCCTTCCTCCTCGACCTCGGCGGTACACCGGTGATCGCAACCTTAACCTTAGGTCTCATGGTCTCCTACATCGTCGACGCCCTCAACTTCAAGTCCGGTGCCTTCTTCGGCGTCTGGTTCACCCTCGTCTTCTCCCAGATCGCCTTCTTCTTCAGCTCCTCCCTCCTCTCCACCTTCACCTCCTTTCCCCTAGCCGCCCTCGCCGCCTTCCTCTGCGCCGAGACCAATTTCCTCATCGGCGTCTGGGTCTCTCTCCAATTCAAGTGGATTCAAATCGAGAACCCTTCAATCGTTCTCGCGCTCGAGCGCCTCCTCTTCGCCTGCCTCCCATTCGCCGCCTCCTCCCTCTTCACCTGGGCTACCATCTCCGCCGTAGGTATGACCAACGCTTCGTACTACCTCATGTCCTTCTCTTGCCTCTTCTATTACCTCTACTCAATTCCCCGCATCTCCTCCTTCAAAACCAAGCAAGACTCCAAGTACCACGGCGGTGAGGTCCCCGACGACAACCTCATCCTCACGCCACTGGAGGGTTGCATCCACACTCTTTATCTCCTCTTCTTCCCTCTCCTCTTCCACATTGCCTCTCACTACAACGTCGTTTTCTCTTCTGCCGCTGCAGTTTCCGATCGATTTCTCCTCTTCTTCATTCCATTTCTCTTCCAGCTCTATGCCTCGACCCGGGGCGCGCTTTGGTGGGTCACGAAGAATCCGAACCAACTGCGCGGCATTCAGGTGATGAATGGAGCTGTTGCACTGGTGGTTGTGGTGATATGTTTGGAAATTAGAGTCGTTTTCCATTCGTTTGGGCGGTACATTCAGGTGCCCCCGCCGTTGAATTACCTTTTGGTGACCACTGCAATGCTCGGAGGTGCATCTGGAGCGGGTGCTTATGCGTTGGGCATGATATCTGATGCTTTCAGCTCCATGGCTTTCACTGCTTTGGCTGTTGTAGTTAGTGTTGCTGGAGCTATCGTTGTCGGGTTTCCTATATTGTTCCTTCCACTGCCTTCAGTTGCCGGTTTCTATTTGGCTCGATTTTTCACAAAGAAGAGTGTTTCATCATATTTTGCTTTTGTTGTTCTTGGAAGCTTGATGGTGGCATGGTTTGTAATCCATAATTTCTGGGATCTAACTATTTGGATGGCAGGAATGTCCCTGAAGTCCTTCTGCAAACTCGTAATTGTGAATGTTGTCTTGGCTATGTCTATTCCTGGTCTAGTACTACTTCCTTCAAAGCTTCACTTTTTGATGGAGATTGGGTTAATTGGCCATGCATTTCTCGTTTGCCACATTGAGAATCGATTTTTTAATTACTCTGGCATATACTTTTATGGTTTTGAGGAAGATGTAATGTACCCAAGCTACATGGTTATTGTGACAACATTTGTGGGTTTAGCTTTGGTGAAAAGACTATCTGTAGATCGTCGTATTGGTGGAAAGGCTGTTTGGGTTTTGACGTGCTTGTATTCAGCTAAGCTGGCTATGCTGCTTATTTCTTCCAAGTCTGTCATATGGGTGTCAGCTATTCTATTATTGGCTGTAACGCCACCATTGCTACTTTACAAGGATAAGTCAAGAACAGCCTCAAAAATGAAAGCTTGGCAAGCGTATGCACATGCAGGTGTGGTTTCCTTAGCAGTCTGGTTTTGCCGTGAAACAATCTTTGAAGCTCTACAGTGGTGGAATGGAAGACCCCCATCTGATGGCTTACTCTTGGGTTGCTGTATTGTTTTGACGGGCTTGGCTTGTGTACCAATTGTGGCTCTCCACTTCTCTCATGTCTTGTCTGCCAAGAGATGCCTAGTGCTGGTGGTGGCAACTGGATTGCTGTTTATCCTTATGCAACCACCTATTCCAGTATCATGGACGTACCGGTCTGACCTAATTAAAGCTGCTCGTCAGACTTCTGATGACATCACCATATATGGATTTGTGGCACAAAAACCTTTGTGGCCGTCATGGCTTCTTATTATGGCAATCCTACTGACTCTAGCAGCTGTTACATCTGTCATACCTATTAAATACATGGTTGAGTTGAGAGTATTTTACTCCATAGCTATGGGTATTGCTCTAGGTGTCTACATATCTACCGAGTACTTCCTTCAGACAGCTTTTTTACATATCCTCATAGTTGTAACCATGGTCTCTGCCTCGGTGTTTGCGGTTTTCACCCATTTTCCATCTGCCTCGAGTACGAAGCTGCTTCCTTGGGTATTTGCTTTACTGGTAGCTCTCTTTCCTGTTACCTATCTTTTGGAGGGCCAAGTGAGAATTAAAAACATCCTCGGAGATAGTGGATTTGGAGACTTGGGTGAAGAAGAGAAGAAGCTCACTACTCTATTTGCTGTTGAGGGGGCAAGGACATCCCTTCTCGGTCTTTATGCAGCAATATTTATGCTAATAGCGCTGGAGATAAAGTTTGAGCTTGCGTCGTTAATGAGGGAAAAGGCTACTGAAAGGCCTGGAATCAGGCACAGTCAATCCGGTGAAAGCACCTCTACTAGCTTTGCTTCAAGAATGAGATTCATGCAACAGCGTAGGTCTGCAAGTGTCTCATCATTCACAATCAAGAAAATGGCTGCTGAGGGAGCTTGGATGCCAGCAGTTGGTAATGTTGCAACTGTGATGTGCTTTGCTATATGCCTCATCCTGAATGTCAATCTCACTGGCGGCTCAAATCGTGCGATATTCTTTCTGGCACCAATTTTGCTGCTTCTCAACCAGGACTCTGATTTTGTTGCCGGATTTGGGGACAAGCAAAGGTATTTCCCTGTTTCAGTAGTGATATCGGCCTACCTAGTCCTGACTGCCATCTACAGCATATGGGAAGATGTCTGGCATGGGAATGCGGGTTGGGGCTTGGAAATTGGCGGTCCAGATTGGTTCTTTGCTGTGAAGAATTTGGCCCTCCTCGTTCTTACATTCCCGAGCCATATCCTTTTCAACAGGGATATGTTGAGTTTCACAAAACAGACAGACTCAATGCCGTTGATAACTATGCCCCTTAATCTGCGATCGATCATAATAACAGATGTGCTGAAGATTAGGATATTAGGGCTCTTGGGAATTGTTTATTCCCTGGTCCAGTATCTAATGTCTAGACAACAGTACATCTCAGGGTTAAAGTACATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1120

Amino Acids

123.45

Weight (kDa)

9.23

Isoelectric Point (pI)

41.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009466)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13390 AT5G13390
fragaria_vesca	FvH4_4g22440
malus_domestica	MD13G1132200.v1.1 MD16G1142500.v1.1
prunus_persica	Prupe.1G213300_v2.0.a1
pyrus_communis	pycom13g11500 pycom16g11290
rosa_chinensis	RchiOBHm_Chr4g0402251 RchiOBHm_Chr4g0428701
rosa_laevigata	RLG00000007134
rosa_multiflora	Rmu_sc0003316.1_g000007
rosa_roxburghii	Rroxscaffold_5G00370370
rosa_rugosa	Rorug04G0227300
rosa_samantha	Rh4AG284500 Rh4BG290500 Rh4CG306700 Rh4DG288100 Rh5DG506600
rosa_wichuraiana	Rw0G020630 Rw4G015480 Rw4G024710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1835
AasI	GACNNNNNNGTC	1 cut(s)	2098
Acc36I	ACCTGC	1 cut(s)	1835
AccB1I	GGYRCC	3 cut(s)	320, 1045, 2923
AccB7I	CCANNNNNTGG	2 cut(s)	1928, 2831
AccBSI	CCGCTC	1 cut(s)	1106
AccI	GTMKAC	2 cut(s)	297, 2304
AccII	CGCG	4 cut(s)	25, 521, 911, 948
AclWI	GGATC	1 cut(s)	1359
AcoI	YGGCCR	2 cut(s)	1492, 2177
AcsI	RAATTY	1 cut(s)	3124
AcuI	CTGAAG	5 cut(s)	358, 1218, 1403, 2312, 3284
AcyI	GRCGYC	3 cut(s)	300, 333, 462
AfeI	AGCGCT	1 cut(s)	2631
AfiI	CCNNNNNNNGG	6 cut(s)	752, 903, 1928, 2032, 2831, 2973
AgeI	ACCGGT	2 cut(s)	250, 2097
AjiI	CACGTC	1 cut(s)	1683
AjnI	CCWGG	5 cut(s)	575, 1435, 2686, 2946, 3303
AjuI	GAANNNNNNNTTGG	6 cut(s)	1052, 1084, 1403, 1435, 1654, 1686
AleI	CACNNNNGTG	1 cut(s)	711
Alw21I	GWGCWC	1 cut(s)	62
Alw26I	GTCTC	7 cut(s)	281, 289, 437, 475, 2374, 2523, 2782
AlwI	GGATC	1 cut(s)	1359
Ama87I	CYCGRG	4 cut(s)	524, 903, 2413, 3151
Aor51HI	AGCGCT	1 cut(s)	2631
AoxI	GGCC	6 cut(s)	1492, 2177, 2485, 2684, 3015, 3129
ApeKI	GCWGC	8 cut(s)	839, 1711, 2117, 2219, 2425, 2609, 2804, 2935
ApoI	RAATTY	1 cut(s)	3124
ArsI	GACNNNNNNTTYG	4 cut(s)	595, 627, 2942, 2974
AsiGI	ACCGGT	2 cut(s)	250, 2097
Asp700I	GAANNNNTTC	1 cut(s)	1388
AspLEI	GCGC	8 cut(s)	221, 440, 523, 531, 911, 913, 948, 2632
AspS9I	GGNCC	6 cut(s)	134, 718, 2485, 3098, 3130, 3307
AsuC2I	CCSGG	2 cut(s)	904, 905
AvaI	CYCGRG	4 cut(s)	524, 903, 2413, 3151
AvaII	GGWCC	4 cut(s)	134, 718, 3098, 3307
AxyI	CCTNAGG	1 cut(s)	271
BaeGI	GKGCMC	1 cut(s)	1050
BaeI	ACNNNNGTAYC	2 cut(s)	237, 270
BalI	TGGCCA	1 cut(s)	1494
BanI	GGYRCC	3 cut(s)	320, 1045, 2923
BanII	GRGCYC	1 cut(s)	3285
BbsI	GAAGAC	2 cut(s)	343, 1921
Bbv12I	GWGCWC	1 cut(s)	62
BbvCI	CCTCAGC	1 cut(s)	2808
BbvI	GCAGC	8 cut(s)	826, 1698, 2104, 2231, 2412, 2621, 2791, 2922
BccI	CCATC	8 cut(s)	593, 1312, 1360, 1468, 1922, 1930, 2413, 3044
BceAI	ACGGC	8 cut(s)	94, 185, 578, 724, 1039, 1860, 2164, 3196
BcgI	CGANNNNNNTGC	2 cut(s)	925, 959
BciT130I	CCWGG	5 cut(s)	577, 1437, 2688, 2948, 3305
BcnI	CCSGG	2 cut(s)	904, 905
BcoDI	GTCTC	7 cut(s)	281, 289, 437, 475, 2374, 2523, 2782
BfmI	CTRYAG	4 cut(s)	840, 1641, 1898, 3040
BfoI	RGCGCY	2 cut(s)	532, 2633
BfuAI	ACCTGC	1 cut(s)	1835
BglI	GCCNNNNNGGC	1 cut(s)	2185
BglII	AGATCT	1 cut(s)	143
BlpI	GCTNAGC	1 cut(s)	1698
BmcAI	AGTACT	2 cut(s)	1446, 2321
Bme1390I	CCNGG	7 cut(s)	577, 904, 905, 1437, 2688, 2948, 3305
Bme18I	GGWCC	4 cut(s)	134, 718, 3098, 3307
BmeT110I	CYCGRG	4 cut(s)	524, 903, 2413, 3151
BmgBI	CACGTC	1 cut(s)	1683
BmgT120I	GGNCC	6 cut(s)	134, 718, 2485, 3098, 3130, 3307
BmiI	GGNNCC	5 cut(s)	82, 322, 720, 1047, 2925
BmrFI	CCNGG	7 cut(s)	577, 904, 905, 1437, 2688, 2948, 3305
BmsI	GCATC	6 cut(s)	678, 768, 1106, 1126, 2012, 2811
BpiI	GAAGAC	2 cut(s)	343, 1921
BpmI	CTGGAG	5 cut(s)	82, 770, 1122, 1209, 2654
Bpu10I	CCTNAGC	2 cut(s)	1858, 2808
Bpu1102I	GCTNAGC	1 cut(s)	1698
BpuEI	CTTGAG	1 cut(s)	134
BpuMI	CCSGG	2 cut(s)	904, 905
Bsa29I	ATCGAT	3 cut(s)	853, 1525, 3242
BsaBI	GATNNNNATC	1 cut(s)	494
BsaHI	GRCGYC	3 cut(s)	300, 333, 462
BsaI	GGTCTC	5 cut(s)	281, 289, 437, 475, 2374
BsaWI	WCCGGW	4 cut(s)	250, 317, 2097, 2708
BsaXI	ACNNNNNCTCC	8 cut(s)	80, 110, 1182, 1212, 1469, 1499, 2627, 2657
Bsc4I	CCNNNNNNNGG	6 cut(s)	752, 903, 1928, 2032, 2831, 2973
Bse118I	RCCGGY	3 cut(s)	250, 1241, 2097
Bse1I	ACTGG	7 cut(s)	753, 984, 2050, 2081, 2454, 2896, 3310
Bse21I	CCTNAGG	1 cut(s)	271
Bse3DI	GCAATG	3 cut(s)	801, 1089, 1775
Bse8I	GATNNNNATC	1 cut(s)	494
BseBI	CCWGG	5 cut(s)	577, 1437, 2688, 2948, 3305
BseCI	ATCGAT	3 cut(s)	853, 1525, 3242
BseGI	GGATG	7 cut(s)	735, 759, 1371, 2505, 2588, 2826, 2871
BseJI	GATNNNNATC	1 cut(s)	494
BseLI	CCNNNNNNNGG	6 cut(s)	752, 903, 1928, 2032, 2831, 2973
BseMI	GCAATG	3 cut(s)	801, 1089, 1775
BseMII	CTCAG	2 cut(s)	2799, 3354
BseNI	ACTGG	7 cut(s)	753, 984, 2050, 2081, 2454, 2896, 3310
BsePI	GCGCGC	1 cut(s)	909
BseSI	GKGCMC	1 cut(s)	1050
BseXI	GCAGC	8 cut(s)	826, 1698, 2104, 2231, 2412, 2621, 2791, 2922
Bsh1236I	CGCG	4 cut(s)	25, 521, 911, 948
Bsh1285I	CGRYCG	2 cut(s)	853, 3242
BshFI	GGCC	6 cut(s)	1494, 2179, 2487, 2686, 3017, 3131
BshNI	GGYRCC	3 cut(s)	320, 1045, 2923
BshTI	ACCGGT	2 cut(s)	250, 2097
BshVI	ATCGAT	3 cut(s)	853, 1525, 3242
BsiEI	CGRYCG	2 cut(s)	853, 3242
BsiHKAI	GWGCWC	1 cut(s)	62
BsiHKCI	CYCGRG	4 cut(s)	524, 903, 2413, 3151
BsiSI	CCGG	8 cut(s)	11, 251, 318, 904, 1242, 2098, 2709, 2967
BslFI	GGGAC	3 cut(s)	704, 1363, 2990
BslI	CCNNNNNNNGG	6 cut(s)	752, 903, 1928, 2032, 2831, 2973
BsmAI	GTCTC	7 cut(s)	281, 289, 437, 475, 2374, 2523, 2782
BsmFI	GGGAC	3 cut(s)	704, 1363, 2990
BsmI	GAATGC	2 cut(s)	951, 3076
BsnI	GGCC	6 cut(s)	1494, 2179, 2487, 2686, 3017, 3131
Bso31I	GGTCTC	5 cut(s)	281, 289, 437, 475, 2374
BsoBI	CYCGRG	4 cut(s)	524, 903, 2413, 3151
Bsp1286I	GDGCHC	3 cut(s)	62, 1050, 3285
Bsp143I	GATC	8 cut(s)	143, 255, 360, 850, 1351, 1645, 3239, 3243
Bsp1720I	GCTNAGC	1 cut(s)	1698
Bsp19I	CCATGG	2 cut(s)	1149, 2364
BspANI	GGCC	6 cut(s)	1494, 2179, 2487, 2686, 3017, 3131
BspCNI	CTCAG	2 cut(s)	2800, 3353
BspDI	ATCGAT	3 cut(s)	853, 1525, 3242
BspFNI	CGCG	4 cut(s)	25, 521, 911, 948
BspLI	GGNNCC	5 cut(s)	82, 322, 720, 1047, 2925
BspMAI	CTGCAG	1 cut(s)	844
BspMI	ACCTGC	1 cut(s)	1835
BspPI	GGATC	1 cut(s)	1359
BspT107I	GGYRCC	3 cut(s)	320, 1045, 2923
BspTNI	GGTCTC	5 cut(s)	281, 289, 437, 475, 2374
BsrBI	CCGCTC	1 cut(s)	1106
BsrDI	GCAATG	3 cut(s)	801, 1089, 1775
BsrFI	RCCGGY	3 cut(s)	250, 1241, 2097
BsrI	ACTGG	7 cut(s)	753, 984, 2050, 2081, 2454, 2896, 3310
BssAI	RCCGGY	3 cut(s)	250, 1241, 2097
BssHII	GCGCGC	1 cut(s)	909
BssMI	GATC	8 cut(s)	143, 255, 360, 850, 1351, 1645, 3239, 3243
BssNI	GRCGYC	3 cut(s)	300, 333, 462
BssT1I	CCWWGG	4 cut(s)	69, 1149, 2364, 2432
Bst2UI	CCWGG	5 cut(s)	577, 1437, 2688, 2948, 3305
Bst4CI	ACNGT	4 cut(s)	1902, 2702, 2848, 3333
BstACI	GRCGYC	3 cut(s)	300, 333, 462
BstC8I	GCNNGC	7 cut(s)	58, 544, 911, 1704, 1830, 2652, 2826
BstDEI	CTNAG	5 cut(s)	271, 1698, 1858, 2808, 3340
BstDSI	CCRYGG	4 cut(s)	23, 706, 1149, 2364
BstEII	GGTNACC	1 cut(s)	1072
BstF5I	GGATG	7 cut(s)	735, 759, 1371, 2505, 2588, 2826, 2871
BstFNI	CGCG	4 cut(s)	25, 521, 911, 948
BstH2I	RGCGCY	2 cut(s)	532, 2633
BstHHI	GCGC	8 cut(s)	221, 440, 523, 531, 911, 913, 948, 2632
BstKTI	GATC	8 cut(s)	146, 258, 363, 853, 1354, 1648, 3242, 3246
BstMAI	GTCTC	7 cut(s)	281, 289, 437, 475, 2374, 2523, 2782
BstMBI	GATC	8 cut(s)	143, 255, 360, 850, 1351, 1645, 3239, 3243
BstMCI	CGRYCG	2 cut(s)	853, 3242
BstNI	CCWGG	5 cut(s)	577, 1437, 2688, 2948, 3305
BstNSI	RCATGY	1 cut(s)	1844
BstPI	GGTNACC	1 cut(s)	1072
BstSCI	CCNGG	7 cut(s)	575, 902, 903, 1435, 2686, 2946, 3303
BstSFI	CTRYAG	4 cut(s)	840, 1641, 1898, 3040
BstSLI	GKGCMC	1 cut(s)	1050
BstUI	CGCG	4 cut(s)	25, 521, 911, 948
BstV1I	GCAGC	8 cut(s)	826, 1698, 2104, 2231, 2412, 2621, 2791, 2922
BstV2I	GAAGAC	2 cut(s)	343, 1921
BstX2I	RGATCY	2 cut(s)	143, 1351
BstXI	CCANNNNNNTGG	3 cut(s)	1028, 2088, 2284
BstYI	RGATCY	2 cut(s)	143, 1351
Bsu15I	ATCGAT	3 cut(s)	853, 1525, 3242
Bsu36I	CCTNAGG	1 cut(s)	271
BsuRI	GGCC	6 cut(s)	1494, 2179, 2487, 2686, 3017, 3131
BsuTUI	ATCGAT	3 cut(s)	853, 1525, 3242
BtgI	CCRYGG	4 cut(s)	23, 706, 1149, 2364
BtrI	CACGTC	1 cut(s)	1683
BtsCI	GGATG	7 cut(s)	735, 759, 1371, 2505, 2588, 2826, 2871
BtsI	GCAGTG	3 cut(s)	1077, 1158, 1226
BtsIMutI	CAGTG	7 cut(s)	746, 977, 1077, 1158, 1226, 1907, 2889
BveI	ACCTGC	1 cut(s)	1835
Cac8I	GCNNGC	7 cut(s)	58, 544, 911, 1704, 1830, 2652, 2826
CfoI	GCGC	8 cut(s)	221, 440, 523, 531, 911, 913, 948, 2632
Cfr10I	RCCGGY	3 cut(s)	250, 1241, 2097
Cfr13I	GGNCC	6 cut(s)	134, 718, 2485, 3098, 3130, 3307
Cfr42I	CCGCGG	1 cut(s)	26
Cfr9I	CCCGGG	1 cut(s)	903
ClaI	ATCGAT	3 cut(s)	853, 1525, 3242
CseI	GACGC	4 cut(s)	308, 322, 451, 2643
CspAI	ACCGGT	2 cut(s)	250, 2097
CspCI	CAANNNNNGTGG	6 cut(s)	109, 144, 467, 502, 1593, 1628
DdeI	CTNAG	5 cut(s)	271, 1698, 1858, 2808, 3340
DpnI	GATC	8 cut(s)	145, 257, 362, 852, 1353, 1647, 3241, 3245
DpnII	GATC	8 cut(s)	143, 255, 360, 850, 1351, 1645, 3239, 3243
DrdI	GACNNNNNNGTC	1 cut(s)	2098
DseDI	GACNNNNNNGTC	1 cut(s)	2098
EaeI	YGGCCR	2 cut(s)	1492, 2177
EciI	GGCGGA	1 cut(s)	580
Eco130I	CCWWGG	4 cut(s)	69, 1149, 2364, 2432
Eco147I	AGGCCT	1 cut(s)	2686
Eco24I	GRGCYC	1 cut(s)	3285
Eco31I	GGTCTC	5 cut(s)	281, 289, 437, 475, 2374
Eco32I	GATATC	2 cut(s)	1131, 3012
Eco47I	GGWCC	4 cut(s)	134, 718, 3098, 3307
Eco47III	AGCGCT	1 cut(s)	2631
Eco57I	CTGAAG	5 cut(s)	358, 1218, 1403, 2312, 3284
Eco81I	CCTNAGG	1 cut(s)	271
Eco88I	CYCGRG	4 cut(s)	524, 903, 2413, 3151
Eco91I	GGTNACC	1 cut(s)	1072
EcoO109I	RGGNCCY	1 cut(s)	718
EcoO65I	GGTNACC	1 cut(s)	1072
EcoRII	CCWGG	5 cut(s)	575, 1435, 2686, 2946, 3303
EcoRV	GATATC	2 cut(s)	1131, 3012
EcoT14I	CCWWGG	4 cut(s)	69, 1149, 2364, 2432
EcoT22I	ATGCAT	1 cut(s)	1501
EcoT38I	GRGCYC	1 cut(s)	3285
ErhI	CCWWGG	4 cut(s)	69, 1149, 2364, 2432
FalI	AAGNNNNNCTT	2 cut(s)	1451, 1483
FaqI	GGGAC	3 cut(s)	704, 1363, 2990
FauI	CCCGC	4 cut(s)	674, 1059, 1099, 3067
FauNDI	CATATG	2 cut(s)	1736, 3047
FblI	GTMKAC	2 cut(s)	297, 2304
FokI	GGATG	7 cut(s)	722, 746, 1378, 2492, 2575, 2833, 2858
FriOI	GRGCYC	1 cut(s)	3285
GlaI	GCGC	8 cut(s)	220, 439, 522, 530, 910, 912, 947, 2631
GsuI	CTGGAG	5 cut(s)	82, 770, 1122, 1209, 2654
HaeII	RGCGCY	2 cut(s)	532, 2633
HaeIII	GGCC	6 cut(s)	1494, 2179, 2487, 2686, 3017, 3131
HapII	CCGG	8 cut(s)	11, 251, 318, 904, 1242, 2098, 2709, 2967
HgaI	GACGC	4 cut(s)	308, 322, 451, 2643
HhaI	GCGC	8 cut(s)	221, 440, 523, 531, 911, 913, 948, 2632
Hin1I	GRCGYC	3 cut(s)	300, 333, 462
Hin6I	GCGC	8 cut(s)	219, 438, 521, 529, 909, 911, 946, 2630
HinP1I	GCGC	8 cut(s)	219, 438, 521, 529, 909, 911, 946, 2630
HincII	GTYRAC	1 cut(s)	298
HindII	GTYRAC	1 cut(s)	298
HindIII	AAGCTT	3 cut(s)	1312, 1460, 1821
HpaII	CCGG	8 cut(s)	11, 251, 318, 904, 1242, 2098, 2709, 2967
Hpy166II	GTNNAC	5 cut(s)	248, 298, 342, 1976, 2305
Hpy8I	GTNNAC	5 cut(s)	248, 298, 342, 1976, 2305
Hpy99I	CGWCG	6 cut(s)	299, 302, 728, 824, 1653, 2659
HpyCH4III	ACNGT	4 cut(s)	1902, 2702, 2848, 3333
HpyCH4IV	ACGT	3 cut(s)	819, 1682, 2093
HpyF3I	CTNAG	5 cut(s)	271, 1698, 1858, 2808, 3340
HpySE526I	ACGT	3 cut(s)	819, 1682, 2093
Hsp92I	GRCGYC	3 cut(s)	300, 333, 462
HspAI	GCGC	8 cut(s)	219, 438, 521, 529, 909, 911, 946, 2630
KspI	CCGCGG	1 cut(s)	26
Kzo9I	GATC	8 cut(s)	143, 255, 360, 850, 1351, 1645, 3239, 3243
LmnI	GCTCC	9 cut(s)	13, 86, 101, 383, 968, 1103, 1151, 1190, 2813
Lsp1109I	GCAGC	8 cut(s)	826, 1698, 2104, 2231, 2412, 2621, 2791, 2922
LweI	GCATC	6 cut(s)	678, 768, 1106, 1126, 2012, 2811
MaeII	ACGT	3 cut(s)	819, 1682, 2093
MaeIII	GTNAC	7 cut(s)	922, 1072, 1600, 1765, 2224, 2359, 2467
MalI	GATC	8 cut(s)	145, 257, 362, 852, 1353, 1647, 3241, 3245
MbiI	CCGCTC	1 cut(s)	1106
MboI	GATC	8 cut(s)	143, 255, 360, 850, 1351, 1645, 3239, 3243
MfeI	CAATTG	1 cut(s)	1980
MflI	RGATCY	2 cut(s)	143, 1351
MhlI	GDGCHC	3 cut(s)	62, 1050, 3285
MlsI	TGGCCA	1 cut(s)	1494
MluNI	TGGCCA	1 cut(s)	1494
MlyI	GAGTC	6 cut(s)	104, 689, 1020, 2206, 2945, 3197
Mox20I	TGGCCA	1 cut(s)	1494
Mph1103I	ATGCAT	1 cut(s)	1501
MroXI	GAANNNNTTC	1 cut(s)	1388
MscI	TGGCCA	1 cut(s)	1494
MseI	TTAA	9 cut(s)	266, 1487, 1533, 2112, 2244, 2499, 2660, 3231, 3347
MslI	CAYNNNNRTG	8 cut(s)	711, 956, 1043, 1082, 1739, 1845, 2282, 3069
Msp20I	TGGCCA	1 cut(s)	1494
MspA1I	CMGCKG	3 cut(s)	25, 839, 2222
MspI	CCGG	8 cut(s)	11, 251, 318, 904, 1242, 2098, 2709, 2967
MspR9I	CCNGG	7 cut(s)	577, 904, 905, 1437, 2688, 2948, 3305
MunI	CAATTG	1 cut(s)	1980
Mva1269I	GAATGC	2 cut(s)	951, 3076
MvaI	CCWGG	5 cut(s)	577, 1437, 2688, 2948, 3305
MvnI	CGCG	4 cut(s)	25, 521, 911, 948
NciI	CCSGG	2 cut(s)	904, 905
NcoI	CCATGG	2 cut(s)	1149, 2364
NdeI	CATATG	2 cut(s)	1736, 3047
NdeII	GATC	8 cut(s)	143, 255, 360, 850, 1351, 1645, 3239, 3243
NlaIV	GGNNCC	5 cut(s)	82, 322, 720, 1047, 2925
NmeAIII	GCCGAG	2 cut(s)	219, 466
NmuCI	GTSAC	3 cut(s)	922, 1072, 1600
NsiI	ATGCAT	1 cut(s)	1501
NspI	RCATGY	1 cut(s)	1844
OliI	CACNNNNGTG	1 cut(s)	711
PaeR7I	CTCGAG	2 cut(s)	524, 2413
PaqCI	CACCTGC	1 cut(s)	1835
PauI	GCGCGC	1 cut(s)	909
PceI	AGGCCT	1 cut(s)	2686
PcsI	WCGNNNNNNNCGW	1 cut(s)	932
PctI	GAATGC	2 cut(s)	951, 3076
PdmI	GAANNNNTTC	1 cut(s)	1388
PfeI	GAWTC	7 cut(s)	162, 195, 490, 931, 1522, 2691, 2748
PflMI	CCANNNNNTGG	2 cut(s)	1928, 2831
PinAI	ACCGGT	2 cut(s)	250, 2097
Ple19I	CGATCG	2 cut(s)	853, 3242
PleI	GAGTC	6 cut(s)	104, 689, 1019, 2206, 2945, 3197
PpsI	GAGTC	6 cut(s)	104, 689, 1019, 2206, 2945, 3197
PpuMI	RGGWCCY	1 cut(s)	718
Psp5II	RGGWCCY	1 cut(s)	718
Psp6I	CCWGG	5 cut(s)	575, 1435, 2686, 2946, 3303
PspEI	GGTNACC	1 cut(s)	1072
PspGI	CCWGG	5 cut(s)	575, 1435, 2686, 2946, 3303
PspN4I	GGNNCC	5 cut(s)	82, 322, 720, 1047, 2925
PspPI	GGNCC	6 cut(s)	134, 718, 2485, 3098, 3130, 3307
PspPPI	RGGWCCY	1 cut(s)	718
PspXI	VCTCGAGB	2 cut(s)	524, 2413
PstI	CTGCAG	1 cut(s)	844
PsuI	RGATCY	2 cut(s)	143, 1351
PteI	GCGCGC	1 cut(s)	909
PvuI	CGATCG	2 cut(s)	853, 3242
PvuII	CAGCTG	1 cut(s)	2222
RseI	CAYNNNNRTG	8 cut(s)	711, 956, 1043, 1082, 1739, 1845, 2282, 3069
SacII	CCGCGG	1 cut(s)	26
SalI	GTCGAC	1 cut(s)	296
SaqAI	TTAA	9 cut(s)	266, 1487, 1533, 2112, 2244, 2499, 2660, 3231, 3347
Sau3AI	GATC	8 cut(s)	143, 255, 360, 850, 1351, 1645, 3239, 3243
Sau96I	GGNCC	6 cut(s)	134, 718, 2485, 3098, 3130, 3307
ScaI	AGTACT	2 cut(s)	1446, 2321
SchI	GAGTC	6 cut(s)	104, 689, 1020, 2206, 2945, 3197
ScrFI	CCNGG	7 cut(s)	577, 904, 905, 1437, 2688, 2948, 3305
SduI	GDGCHC	3 cut(s)	62, 1050, 3285
SfaNI	GCATC	6 cut(s)	678, 768, 1106, 1126, 2012, 2811
SfcI	CTRYAG	4 cut(s)	840, 1641, 1898, 3040
Sfr274I	CTCGAG	2 cut(s)	524, 2413
Sfr303I	CCGCGG	1 cut(s)	26
SgrAI	CRCCGGYG	1 cut(s)	250
SgrBI	CCGCGG	1 cut(s)	26
SgrDI	CGTCGACG	1 cut(s)	296
SinI	GGWCC	4 cut(s)	134, 718, 3098, 3307
SlaI	CTCGAG	2 cut(s)	524, 2413
SmaI	CCCGGG	1 cut(s)	905
SmiMI	CAYNNNNRTG	8 cut(s)	711, 956, 1043, 1082, 1739, 1845, 2282, 3069
SmlI	CTYRAG	3 cut(s)	149, 524, 2413
SmoI	CTYRAG	3 cut(s)	149, 524, 2413
SseBI	AGGCCT	1 cut(s)	2686
SspI	AATATT	1 cut(s)	2616
StuI	AGGCCT	1 cut(s)	2686
StyD4I	CCNGG	7 cut(s)	575, 902, 903, 1435, 2686, 2946, 3303
StyI	CCWWGG	4 cut(s)	69, 1149, 2364, 2432
TaaI	ACNGT	4 cut(s)	1902, 2702, 2848, 3333
TaiI	ACGT	3 cut(s)	822, 1685, 2096
TaqII	GACCGA	1 cut(s)	2588
TatI	WGTACW	4 cut(s)	1444, 2319, 3333, 3351
TauI	GCSGC	9 cut(s)	10, 25, 224, 419, 428, 560, 839, 951, 2898
TfiI	GAWTC	7 cut(s)	162, 195, 490, 931, 1522, 2691, 2748
Tru1I	TTAA	9 cut(s)	266, 1487, 1533, 2112, 2244, 2499, 2660, 3231, 3347
Tru9I	TTAA	9 cut(s)	266, 1487, 1533, 2112, 2244, 2499, 2660, 3231, 3347
TscAI	CASTG	7 cut(s)	753, 984, 1084, 1165, 1233, 1907, 2896
TseFI	GTSAC	3 cut(s)	922, 1072, 1600
TseI	GCWGC	8 cut(s)	839, 1711, 2117, 2219, 2425, 2609, 2804, 2935
Tsp45I	GTSAC	3 cut(s)	922, 1072, 1600
TspDTI	ATGAA	5 cut(s)	859, 977, 1272, 1832, 2740
TspGWI	ACGGA	1 cut(s)	23
TspMI	CCCGGG	1 cut(s)	903
TspRI	CASTG	7 cut(s)	753, 984, 1084, 1165, 1233, 1907, 2896
Van91I	CCANNNNNTGG	2 cut(s)	1928, 2831
VpaK11BI	GGWCC	4 cut(s)	134, 718, 3098, 3307
XapI	RAATTY	1 cut(s)	3124
XbaI	TCTAGA	2 cut(s)	140, 3323
XceI	RCATGY	1 cut(s)	1844
XhoI	CTCGAG	2 cut(s)	524, 2413
XmaI	CCCGGG	1 cut(s)	903
XmiI	GTMKAC	2 cut(s)	297, 2304
XmnI	GAANNNNTTC	1 cut(s)	1388
ZrmI	AGTACT	2 cut(s)	1446, 2321
Zsp2I	ATGCAT	1 cut(s)	1501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.