Prupe.1G264100_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
27267872 .. 27270179
2308 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G264100.1

Sequence Viewer

Length: 1950 bp
ATGACAATTGAGCTGCTGTGGGTTGTGCTCATCACCATCTTAAGATTTGGAGAGGCAAATCCAAGACTAAAAGAAGTATGCAACCCAAGTGACCTGAAAGGCCTAACCATTTTCAAGTCTGGAATTCATGTTGACACTTCAGGCCGGCTGGCAAAGTGGGTTGGTGGCAATTGTTGCAACTGGGAAGGCATTTCCTGTGAAATTAGGACTGGCAGAGTGGCAGTAATAAATCTATCTGCCTTCATTTCATCTGATGATTCTCCTTTCCAAGCCCAGATGGAAGGCTTGTTCTCTTCTTCAATTACCCTCCTAGCCTCTCTTCAAGTCCTAGATCTTGGTGGGCTCTCTGGTCTTTCTGGGACACTTCCAAAATCCATAGGTTTTCACCTCCCGGAGCTCAGAAGGCTCGTTCTTTACGGCAACAACCTCAGTGGAGCAATCCCAAAAAGCATTGGTAAGCTGTCAAAACTTGAGGAACTTGTGCTGCATGAGAATAAGTTTTCTGGGTCACTCCCATCAAGCCTCGGGAGCCTTAAGAATCTAAAGAGGCTAAGTTTATATTCAAATCGACTTTTGGGTCGCATGCCTGATTCGTTTACAAATTTGACAAGTTTGGTATATTTGGATCTTCATGACAATTCTCTGACTGGTCACATCCCACAGAGAATTGGTCAGTTGCAGGTCTTGGAAGAGCTTGATCTTTCAAGCAATTTCTTGGCTGGGAATCTTCCACCTTCATTGGCTAATTTAACTGCCATTTCAGTTATGTGCTTGGACACTAATTATCTTGAGGGACCAATTCCATTTCCATCAAGCTCTGCCCAAATGTCTTCTCTTCGGCTTTTAAGGCTGCATACTAATCATCTTACTGGGAAAATACCACCCACATTTGGAGATCTGGTCTCCCTCCAAAGATTTTCCCTAGCAAATAACAAGCATGAGGGAGCAATCCCCTCTAGCTTTGGTAATTTATCAGCTTTGAGAGAGCTATACCTTAATGGCAACCAATTTTCTGGTCAAATACCAAAATCAGTTGGTCAACTCTCCCAGCTTATACTCTTCAACATCTCTCATAACTTGATCCAAGGACCACTTCCTTCTGAGATGTCTTCCCTCCAAAATATTCAAGCGCTCGATCTGTCATTCAACCTTTTAAGCCTTTCCTCCATCCCAAAATGGCTTGCGGAGCTGCCGTCCCTTTCTCGGATTTACTTGGCAGGATGTGGGATCCAGGGCAACATTCCAGGGTTCTTGCGCTCAACTCCAAGTCCAATTCAGGAACTGGACTTATCAGCCAACAATCTTACTGGAAGCATTCCAACATGGCTTGGAGTTGGAAGCCTTGCTCAGCTCTACCTATTAAACCTGTCCAGGAACTCACTTGTTTCAAAGATCCCTGACTCAGTTACAAACTTGCACGACTTGGGTGTGCTTGATCTCCATGGAAACAAACTATCAGGCTCGATGAGCCGAGTTTTCGAGATAGGACTGGAGTTCCCAGATGGATCACTAACATATCTTGATCTTTCTGAAAACAAATTCTCCAGTGGAATGGGGCAAATTGGGGTAGGATCTCAGCGTGGCATTCAGCTTCTCAACTTATCAAACAACATTTTGCAAGGTAGATTTCCAACATCCATAGAGAGACTGAAGTTACTGCAAAGTCTGGATTTGAGTTCCAACAAGTTAGGCTTCAACTTGCCAGAGGCCTTGGCGAATTTAAGCATGTTAGAGACGCTAAAGTTGGAGAAAAACCGCTTTGCTGGTAAAATTCCAAATGGGTTTTTGAAGTTGAGAAAGCTGAAGCAATTAGATTTATCAGACAATCTTTTAGTCGGGGAAATCCCAGTGGGTAAACCCTTGAGTGACTTTCCCCAGAGCTCTTACTCTGGAAACAGAGGCTTATGTGGAAAGCCTCTCGCTCCTTGTAAGCCTACATGGTTTGGTTGA

Protein Analysis

650

Amino Acids

70.32

Weight (kDa)

8.76

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 576
Acc36I ACCTGC 1 cut(s) 670
AciI CCGC 2 cut(s) 1184, 1756
AclWI GGATC 7 cut(s) 633, 1075, 1222, 1235, 1387, 1513, 1579
AcsI RAATTY 5 cut(s) 123, 601, 1538, 1717, 1770
AcuI CTGAAG 3 cut(s) 123, 1670, 1823
AfeI AGCGCT 1 cut(s) 1131
AfiI CCNNNNNNNGG 2 cut(s) 890, 1203
AflII CTTAAG 2 cut(s) 40, 533
AjnI CCWGG 3 cut(s) 1230, 1243, 1370
AjuI GAANNNNNNNTTGG 2 cut(s) 1077, 1109
AloI GAACNNNNNNTCC 2 cut(s) 272, 304
Alw21I GWGCWC 3 cut(s) 30, 399, 1883
Alw26I GTCTC 3 cut(s) 907, 1639, 1727
AlwI GGATC 7 cut(s) 633, 1075, 1222, 1235, 1387, 1513, 1579
AlwNI CAGNNNCTG 1 cut(s) 1282
Ama87I CYCGRG 1 cut(s) 524
Aor51HI AGCGCT 1 cut(s) 1131
AoxI GGCC 3 cut(s) 100, 142, 1707
ApeKI GCWGC 4 cut(s) 13, 484, 850, 1189
ApoI RAATTY 5 cut(s) 123, 601, 1538, 1717, 1770
AspLEI GCGC 2 cut(s) 1132, 1257
AspS9I GGNCC 2 cut(s) 794, 1088
AsuC2I CCSGG 1 cut(s) 392
AsuHPI GGTGA 2 cut(s) 25, 377
AvaI CYCGRG 1 cut(s) 524
AvaII GGWCC 2 cut(s) 794, 1088
BamHI GGATCC 1 cut(s) 1227
BanII GRGCYC 3 cut(s) 345, 399, 1883
BbsI GAAGAC 2 cut(s) 822, 1101
Bbv12I GWGCWC 3 cut(s) 30, 399, 1883
BbvI GCAGC 3 cut(s) 471, 837, 1176
BccI CCATC 6 cut(s) 44, 271, 523, 817, 1175, 1496
BceAI ACGGC 2 cut(s) 433, 1177
BciT130I CCWGG 3 cut(s) 1232, 1245, 1372
BcnI CCSGG 1 cut(s) 392
BcoDI GTCTC 3 cut(s) 907, 1639, 1727
BfaI CTAG 4 cut(s) 311, 329, 923, 957
BfoI RGCGCY 1 cut(s) 1133
BfrI CTTAAG 2 cut(s) 40, 533
BfuAI ACCTGC 1 cut(s) 670
BglII AGATCT 2 cut(s) 331, 895
BisI GCNGC 4 cut(s) 14, 485, 851, 1190
BlpI GCTNAGC 1 cut(s) 1347
BlsI GCNGC 4 cut(s) 15, 486, 852, 1191
Bme1390I CCNGG 4 cut(s) 392, 1232, 1245, 1372
Bme18I GGWCC 2 cut(s) 794, 1088
BmeT110I CYCGRG 1 cut(s) 524
BmgT120I GGNCC 2 cut(s) 794, 1088
BmiI GGNNCC 3 cut(s) 530, 795, 1229
BmrFI CCNGG 4 cut(s) 392, 1232, 1245, 1372
BmrI ACTGGG 3 cut(s) 190, 879, 1841
BmuI ACTGGG 3 cut(s) 190, 879, 1841
BpiI GAAGAC 2 cut(s) 822, 1101
BpmI CTGGAG 2 cut(s) 1511, 1528
Bpu1102I GCTNAGC 1 cut(s) 1347
BpuEI CTTGAG 3 cut(s) 491, 809, 1882
BpuMI CCSGG 1 cut(s) 392
BsaI GGTCTC 1 cut(s) 907
BsaJI CCNNGG 6 cut(s) 523, 1084, 1231, 1244, 1441, 1710
BsaXI ACNNNNNCTCC 6 cut(s) 885, 915, 1178, 1208, 1526, 1556
Bsc4I CCNNNNNNNGG 2 cut(s) 890, 1203
Bse118I RCCGGY 1 cut(s) 144
Bse1I ACTGG 9 cut(s) 185, 214, 652, 874, 1287, 1312, 1494, 1545, 1847
BseBI CCWGG 3 cut(s) 1232, 1245, 1372
BseDI CCNNGG 6 cut(s) 523, 1084, 1231, 1244, 1441, 1710
BseGI GGATG 4 cut(s) 654, 1167, 1226, 1634
BseLI CCNNNNNNNGG 2 cut(s) 890, 1203
BseMII CTCAG 6 cut(s) 412, 442, 1092, 1361, 1416, 1589
BseNI ACTGG 9 cut(s) 185, 214, 652, 874, 1287, 1312, 1494, 1545, 1847
BseXI GCAGC 3 cut(s) 471, 837, 1176
BseYI CCCAGC 2 cut(s) 719, 1047
BshFI GGCC 3 cut(s) 102, 144, 1709
BsiHKAI GWGCWC 3 cut(s) 30, 399, 1883
BsiHKCI CYCGRG 1 cut(s) 524
BsiSI CCGG 2 cut(s) 145, 392
BslFI GGGAC 3 cut(s) 373, 807, 1180
BslI CCNNNNNNNGG 2 cut(s) 890, 1203
BsmAI GTCTC 3 cut(s) 907, 1639, 1727
BsmBI CGTCTC 1 cut(s) 1727
BsmFI GGGAC 3 cut(s) 373, 807, 1180
BsmI GAATGC 2 cut(s) 1314, 1584
BsnI GGCC 3 cut(s) 102, 144, 1709
Bso31I GGTCTC 1 cut(s) 907
BsoBI CYCGRG 1 cut(s) 524
Bsp1286I GDGCHC 4 cut(s) 30, 345, 399, 1883
Bsp1720I GCTNAGC 1 cut(s) 1347
Bsp19I CCATGG 1 cut(s) 1441
BspACI CCGC 2 cut(s) 1184, 1756
BspANI GGCC 3 cut(s) 102, 144, 1709
BspCNI CTCAG 6 cut(s) 411, 441, 1093, 1360, 1415, 1588
BspHI TCATGA 1 cut(s) 631
BspLI GGNNCC 3 cut(s) 530, 795, 1229
BspMI ACCTGC 1 cut(s) 670
BspPI GGATC 7 cut(s) 633, 1075, 1222, 1235, 1387, 1513, 1579
BspQI GCTCTTC 1 cut(s) 684
BspTI CTTAAG 2 cut(s) 40, 533
BspTNI GGTCTC 1 cut(s) 907
BsrFI RCCGGY 1 cut(s) 144
BsrI ACTGG 9 cut(s) 185, 214, 652, 874, 1287, 1312, 1494, 1545, 1847
BssAI RCCGGY 1 cut(s) 144
BssECI CCNNGG 6 cut(s) 523, 1084, 1231, 1244, 1441, 1710
BssT1I CCWWGG 3 cut(s) 1084, 1441, 1710
Bst2UI CCWGG 3 cut(s) 1232, 1245, 1372
Bst6I CTCTTC 5 cut(s) 298, 324, 684, 840, 1064
BstAFI CTTAAG 2 cut(s) 40, 533
BstAPI GCANNNNNTGC 1 cut(s) 174
BstC8I GCNNGC 4 cut(s) 146, 150, 584, 1182
BstDEI CTNAG 7 cut(s) 398, 428, 551, 1101, 1347, 1402, 1575
BstDSI CCRYGG 1 cut(s) 1441
BstF5I GGATG 4 cut(s) 654, 1167, 1226, 1634
BstH2I RGCGCY 1 cut(s) 1133
BstHHI GCGC 2 cut(s) 1132, 1257
BstMAI GTCTC 3 cut(s) 907, 1639, 1727
BstMWI GCNNNNNNNGC 6 cut(s) 174, 403, 528, 847, 1186, 1467
BstNI CCWGG 3 cut(s) 1232, 1245, 1372
BstNSI RCATGY 2 cut(s) 586, 1729
BstSCI CCNGG 4 cut(s) 390, 1230, 1243, 1370
BstV1I GCAGC 3 cut(s) 471, 837, 1176
BstV2I GAAGAC 2 cut(s) 822, 1101
BstX2I RGATCY 6 cut(s) 331, 625, 895, 1227, 1392, 1571
BstXI CCANNNNNNTGG 2 cut(s) 1013, 1552
BstYI RGATCY 6 cut(s) 331, 625, 895, 1227, 1392, 1571
BsuRI GGCC 3 cut(s) 102, 144, 1709
BtgI CCRYGG 1 cut(s) 1441
BtsCI GGATG 4 cut(s) 654, 1167, 1226, 1634
BtsIMutI CAGTG 3 cut(s) 436, 1552, 1854
BveI ACCTGC 1 cut(s) 670
Cac8I GCNNGC 4 cut(s) 146, 150, 584, 1182
CaiI CAGNNNCTG 1 cut(s) 1282
CciI TCATGA 1 cut(s) 631
CfoI GCGC 2 cut(s) 1132, 1257
Cfr10I RCCGGY 1 cut(s) 144
Cfr13I GGNCC 2 cut(s) 794, 1088
CseI GACGC 1 cut(s) 1744
CspCI CAANNNNNGTGG 4 cut(s) 412, 447, 720, 755
CviAII CATG 9 cut(s) 128, 488, 583, 632, 938, 1323, 1442, 1726, 1938
DdeI CTNAG 7 cut(s) 398, 428, 551, 1101, 1347, 1402, 1575
DrdI GACNNNNNNGTC 1 cut(s) 576
DseDI GACNNNNNNGTC 1 cut(s) 576
Eam1104I CTCTTC 5 cut(s) 298, 324, 684, 840, 1064
EarI CTCTTC 5 cut(s) 298, 324, 684, 840, 1064
Ecl136II GAGCTC 2 cut(s) 397, 1881
Eco130I CCWWGG 3 cut(s) 1084, 1441, 1710
Eco147I AGGCCT 2 cut(s) 102, 1709
Eco24I GRGCYC 3 cut(s) 345, 399, 1883
Eco31I GGTCTC 1 cut(s) 907
Eco47I GGWCC 2 cut(s) 794, 1088
Eco47III AGCGCT 1 cut(s) 1131
Eco53kI GAGCTC 2 cut(s) 397, 1881
Eco57I CTGAAG 3 cut(s) 123, 1670, 1823
Eco88I CYCGRG 1 cut(s) 524
EcoICRI GAGCTC 2 cut(s) 397, 1881
EcoRI GAATTC 1 cut(s) 123
EcoRII CCWGG 3 cut(s) 1230, 1243, 1370
EcoT14I CCWWGG 3 cut(s) 1084, 1441, 1710
EcoT38I GRGCYC 3 cut(s) 345, 399, 1883
ErhI CCWWGG 3 cut(s) 1084, 1441, 1710
Esp3I CGTCTC 1 cut(s) 1727
FaeI CATG 9 cut(s) 131, 491, 586, 635, 941, 1326, 1445, 1729, 1941
FalI AAGNNNNNCTT 4 cut(s) 1077, 1109, 1676, 1708
FaqI GGGAC 3 cut(s) 373, 807, 1180
FatI CATG 9 cut(s) 127, 487, 582, 631, 937, 1322, 1441, 1725, 1937
Fnu4HI GCNGC 4 cut(s) 14, 485, 851, 1190
FokI GGATG 4 cut(s) 641, 1154, 1233, 1621
FriOI GRGCYC 3 cut(s) 345, 399, 1883
Fsp4HI GCNGC 4 cut(s) 14, 485, 851, 1190
FspBI CTAG 4 cut(s) 311, 329, 923, 957
GlaI GCGC 2 cut(s) 1131, 1256
GluI GCNGC 4 cut(s) 14, 485, 851, 1190
GsaI CCCAGC 2 cut(s) 723, 1051
GsuI CTGGAG 2 cut(s) 1511, 1528
HaeII RGCGCY 1 cut(s) 1133
HaeIII GGCC 3 cut(s) 102, 144, 1709
HapII CCGG 2 cut(s) 145, 392
HgaI GACGC 1 cut(s) 1744
HhaI GCGC 2 cut(s) 1132, 1257
Hin1II CATG 9 cut(s) 131, 491, 586, 635, 941, 1326, 1445, 1729, 1941
Hin6I GCGC 2 cut(s) 1130, 1255
HinP1I GCGC 2 cut(s) 1130, 1255
HincII GTYRAC 2 cut(s) 133, 1040
HindII GTYRAC 2 cut(s) 133, 1040
HinfI GANTC 5 cut(s) 257, 538, 590, 724, 1400
HpaII CCGG 2 cut(s) 145, 392
HphI GGTGA 2 cut(s) 25, 377
Hpy166II GTNNAC 4 cut(s) 133, 597, 1040, 1856
Hpy188I TCNGA 7 cut(s) 253, 401, 645, 1102, 1206, 1531, 1822
Hpy188III TCNNGA 9 cut(s) 120, 526, 632, 788, 1277, 1480, 1520, 1667, 1890
Hpy8I GTNNAC 4 cut(s) 133, 597, 1040, 1856
HpyAV CCTTC 6 cut(s) 179, 250, 275, 396, 744, 1107
HpyCH4V TGCA 8 cut(s) 81, 177, 487, 679, 853, 1417, 1618, 1660
HpyF10VI GCNNNNNNNGC 6 cut(s) 174, 403, 528, 847, 1186, 1467
HpyF3I CTNAG 7 cut(s) 398, 428, 551, 1101, 1347, 1402, 1575
Hsp92II CATG 9 cut(s) 131, 491, 586, 635, 941, 1326, 1445, 1729, 1941
HspAI GCGC 2 cut(s) 1130, 1255
KroI GCCGGC 1 cut(s) 144
KroNI GCCGGC 1 cut(s) 146
LguI GCTCTTC 1 cut(s) 684
LmnI GCTCC 6 cut(s) 394, 434, 528, 944, 1186, 1927
Lsp1109I GCAGC 3 cut(s) 471, 837, 1176
MaeI CTAG 4 cut(s) 311, 329, 923, 957
MaeIII GTNAC 6 cut(s) 89, 507, 650, 1405, 1653, 1865
MfeI CAATTG 2 cut(s) 6, 169
MflI RGATCY 6 cut(s) 331, 625, 895, 1227, 1392, 1571
MhlI GDGCHC 4 cut(s) 30, 345, 399, 1883
MlyI GAGTC 1 cut(s) 1394
MmeI TCCRAC 5 cut(s) 1315, 1343, 1655, 1704, 1725
MroNI GCCGGC 1 cut(s) 144
MseI TTAA 8 cut(s) 41, 534, 749, 845, 996, 1154, 1361, 1721
MspCI CTTAAG 2 cut(s) 40, 533
MspI CCGG 2 cut(s) 145, 392
MspR9I CCNGG 4 cut(s) 392, 1232, 1245, 1372
MunI CAATTG 2 cut(s) 6, 169
Mva1269I GAATGC 2 cut(s) 1314, 1584
MvaI CCWGG 3 cut(s) 1232, 1245, 1372
MwoI GCNNNNNNNGC 6 cut(s) 174, 403, 528, 847, 1186, 1467
NaeI GCCGGC 1 cut(s) 146
NciI CCSGG 1 cut(s) 392
NcoI CCATGG 1 cut(s) 1441
NgoMIV GCCGGC 1 cut(s) 144
NlaIII CATG 9 cut(s) 131, 491, 586, 635, 941, 1326, 1445, 1729, 1941
NlaIV GGNNCC 3 cut(s) 530, 795, 1229
NmeAIII GCCGAG 1 cut(s) 1496
NmuCI GTSAC 4 cut(s) 89, 507, 650, 1865
NspI RCATGY 2 cut(s) 586, 1729
PaeI GCATGC 1 cut(s) 586
PagI TCATGA 1 cut(s) 631
PceI AGGCCT 2 cut(s) 102, 1709
PciSI GCTCTTC 1 cut(s) 684
PctI GAATGC 2 cut(s) 1314, 1584
PdiI GCCGGC 1 cut(s) 146
PfeI GAWTC 4 cut(s) 257, 538, 590, 724
PfoI TCCNGGA 2 cut(s) 390, 1370
PkrI GCNGC 4 cut(s) 15, 486, 852, 1191
PleI GAGTC 1 cut(s) 1394
PpsI GAGTC 1 cut(s) 1394
Psp124BI GAGCTC 2 cut(s) 399, 1883
Psp6I CCWGG 3 cut(s) 1230, 1243, 1370
PspFI CCCAGC 2 cut(s) 719, 1047
PspGI CCWGG 3 cut(s) 1230, 1243, 1370
PspN4I GGNNCC 3 cut(s) 530, 795, 1229
PspPI GGNCC 2 cut(s) 794, 1088
PstNI CAGNNNCTG 1 cut(s) 1282
PsuI RGATCY 6 cut(s) 331, 625, 895, 1227, 1392, 1571
SacI GAGCTC 2 cut(s) 399, 1883
SapI GCTCTTC 1 cut(s) 684
SaqAI TTAA 8 cut(s) 41, 534, 749, 845, 996, 1154, 1361, 1721
SatI GCNGC 4 cut(s) 14, 485, 851, 1190
Sau96I GGNCC 2 cut(s) 794, 1088
SchI GAGTC 1 cut(s) 1394
ScrFI CCNGG 4 cut(s) 392, 1232, 1245, 1372
SduI GDGCHC 4 cut(s) 30, 345, 399, 1883
SinI GGWCC 2 cut(s) 794, 1088
SmlI CTYRAG 5 cut(s) 40, 470, 533, 788, 1861
SmoI CTYRAG 5 cut(s) 40, 470, 533, 788, 1861
SphI GCATGC 1 cut(s) 586
SseBI AGGCCT 2 cut(s) 102, 1709
SsiI CCGC 2 cut(s) 1184, 1756
SspI AATATT 1 cut(s) 1123
SspMI CTAG 4 cut(s) 311, 329, 923, 957
SstI GAGCTC 2 cut(s) 399, 1883
StuI AGGCCT 2 cut(s) 102, 1709
StyD4I CCNGG 4 cut(s) 390, 1230, 1243, 1370
StyI CCWWGG 3 cut(s) 1084, 1441, 1710
TaqI TCGA 4 cut(s) 568, 1134, 1463, 1479
TfiI GAWTC 4 cut(s) 257, 538, 590, 724
Tru1I TTAA 8 cut(s) 41, 534, 749, 845, 996, 1154, 1361, 1721
Tru9I TTAA 8 cut(s) 41, 534, 749, 845, 996, 1154, 1361, 1721
TscAI CASTG 3 cut(s) 436, 1552, 1854
TseFI GTSAC 4 cut(s) 89, 507, 650, 1865
TseI GCWGC 4 cut(s) 13, 484, 850, 1189
Tsp45I GTSAC 4 cut(s) 89, 507, 650, 1865
TspDTI ATGAA 5 cut(s) 116, 232, 237, 620, 726
TspRI CASTG 3 cut(s) 436, 1552, 1854
Vha464I CTTAAG 2 cut(s) 40, 533
VpaK11BI GGWCC 2 cut(s) 794, 1088
XapI RAATTY 5 cut(s) 123, 601, 1538, 1717, 1770
XceI RCATGY 2 cut(s) 586, 1729
XspI CTAG 4 cut(s) 311, 329, 923, 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.