Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006453

Physical Location & Seq

Genomic Coordinates Reverse (-)

30977850 .. 30979504

Gene Structure 1655 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G324800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 804 bp

ATGTCTGATCAAGCCATGAAAAAGATGGAAGAAGGTGGCAGCTCGGGTACAGACAGCACAAATTCTGGGATTTGCTCTTCTTCTGAGATTGTTCAACTTACCCAAAAGGTAATTGCAGAGGTGATTGGGACATATTTCGTGGTATTTATCGGGTGTGGTTCGGTAGCAGTGAATAAGATTTACGGTTCTGTAACATTTCCAGGGATTGCAATTACTTGGGGATTAATTGTTATGGTCATGGTCTATTCCGTTGGCCATATCTCCGGCGCCCACTTTAATCCCGCTGTCACCGTCACCTTTGCCATCTTTCGCCACTTTCCAGTCAAAGAGGTGCCTCTATATGTTGTGGCGCAGGTGTTAGGATCCATCCTTGCAAGCGGGACGCTATGCCTTCTTTTGGACGTACCCCAAACCGCATACTTTGGTACTTTACCAGTTGGATCAGATATTCGATCTTTGATCATTGAGATCATTGCCTCCTTTCTTTTGATGTTTGTTATTTCAGGCGTTGCCACCGACAACAGAGCTATTGGAGAACTGGCAGGAATTGCTGTAGGAATGACAATAGTGATCGATGTCTTCGTTGCCGGGCCAGTATCAGGGGCATCAATGAATCCAGCGAGGAGCCTAGGGCCAGCAATTGTGATGCACACATACAAAGGACTGTGGATTTACTTTGCAGGTCCAATAGTGGGCACCGTACTCGGTGGATTTGCCTACAATTTGATTAGATTTACTGACAAACCACTCCGCGAGTTAACCAAGAGTGCTTCCTTCATCAAGTCCCTCTCCACTAAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005372 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006833 GO:0008150 GO:0015250 GO:0015267 GO:0015318 GO:0016020 GO:0016021 GO:0022803 GO:0022838 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0042044 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MIP

Protein Analysis

268

Amino Acids

28.15

Weight (kDa)

7.71

Isoelectric Point (pI)

29.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37810 AT5G37820 AT5G37820
fragaria_vesca	FvH4_4g32440 FvH4_4g32440 FvH4_5g37280
malus_domestica	MD00G1201500.v1.1 MD08G1183500.v1.1 MD13G1025400.v1.1
prunus_persica	Prupe.1G324800_v2.0.a1
pyrus_communis	pycom08g15720
rosa_chinensis	RchiOBHm_Chr4g0441301 RchiOBHm_Chr7g0238841
rosa_laevigata	RLG00000000801 RLG00000006104
rosa_multiflora	Rmu_sc0012909.1_g000006
rosa_roxburghii	Rroxscaffold_5G00382180
rosa_rugosa	Rorug04G0332300 Rorug07G0323800
rosa_samantha	Rh4AG384100 Rh4BG398200 Rh4CG413300 Rh4DG390800 Rh7BG450700
rosa_wichuraiana	Rw4G033150 Rw7G039920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	343
Acc36I	ACCTGC	2 cut(s)	343, 671
AccB1I	GGYRCC	3 cut(s)	266, 331, 695
AccII	CGCG	1 cut(s)	753
AciI	CCGC	4 cut(s)	282, 378, 414, 751
AclWI	GGATC	3 cut(s)	357, 370, 448
AcoI	YGGCCR	1 cut(s)	253
AcsI	RAATTY	1 cut(s)	61
AcyI	GRCGYC	1 cut(s)	267
AfaI	GTAC	4 cut(s)	49, 405, 427, 702
AfiI	CCNNNNNNNGG	3 cut(s)	397, 599, 692
AgsI	TTSAA	1 cut(s)	95
AjnI	CCWGG	1 cut(s)	199
AluBI	AGCT	2 cut(s)	42, 527
AluI	AGCT	2 cut(s)	42, 527
AlwI	GGATC	3 cut(s)	357, 370, 448
Ama87I	CYCGRG	1 cut(s)	43
AoxI	GGCC	3 cut(s)	253, 590, 632
ApeKI	GCWGC	1 cut(s)	39
ApoI	RAATTY	1 cut(s)	61
AseI	ATTAAT	1 cut(s)	224
AspA2I	CCTAGG	1 cut(s)	628
AspLEI	GCGC	2 cut(s)	269, 352
AspS9I	GGNCC	3 cut(s)	590, 632, 683
AsuC2I	CCSGG	1 cut(s)	589
AsuHPI	GGTGA	3 cut(s)	133, 280, 286
AvaI	CYCGRG	1 cut(s)	43
AvaII	GGWCC	1 cut(s)	683
AvrII	CCTAGG	1 cut(s)	628
BaeGI	GKGCMC	1 cut(s)	698
BalI	TGGCCA	1 cut(s)	255
BamHI	GGATCC	1 cut(s)	362
BanI	GGYRCC	3 cut(s)	266, 331, 695
BbsI	GAAGAC	1 cut(s)	571
BbvI	GCAGC	1 cut(s)	51
BccI	CCATC	3 cut(s)	19, 311, 374
BcgI	CGANNNNNNTGC	2 cut(s)	685, 719
BciT130I	CCWGG	1 cut(s)	201
BclI	TGATCA	2 cut(s)	7, 459
BcnI	CCSGG	1 cut(s)	589
BfaI	CTAG	1 cut(s)	629
BfmI	CTRYAG	1 cut(s)	552
BfoI	RGCGCY	1 cut(s)	270
BfuAI	ACCTGC	2 cut(s)	343, 671
BisI	GCNGC	1 cut(s)	40
BlnI	CCTAGG	1 cut(s)	628
BlsI	GCNGC	1 cut(s)	41
Bme1390I	CCNGG	2 cut(s)	201, 589
Bme18I	GGWCC	1 cut(s)	683
BmeT110I	CYCGRG	1 cut(s)	43
BmgT120I	GGNCC	3 cut(s)	590, 632, 683
BmiI	GGNNCC	5 cut(s)	268, 333, 364, 626, 697
BmrFI	CCNGG	2 cut(s)	201, 589
BmsI	GCATC	2 cut(s)	614, 636
BpiI	GAAGAC	1 cut(s)	571
BpuMI	CCSGG	1 cut(s)	589
Bsa29I	ATCGAT	1 cut(s)	573
BsaHI	GRCGYC	1 cut(s)	267
BsaJI	CCNNGG	2 cut(s)	200, 628
Bsc4I	CCNNNNNNNGG	3 cut(s)	397, 599, 692
Bse1I	ACTGG	4 cut(s)	320, 434, 543, 593
Bse3DI	GCAATG	1 cut(s)	471
BseBI	CCWGG	1 cut(s)	201
BseCI	ATCGAT	1 cut(s)	573
BseDI	CCNNGG	2 cut(s)	200, 628
BseGI	GGATG	1 cut(s)	366
BseLI	CCNNNNNNNGG	3 cut(s)	397, 599, 692
BseMI	GCAATG	1 cut(s)	471
BseMII	CTCAG	1 cut(s)	75
BseNI	ACTGG	4 cut(s)	320, 434, 543, 593
BseRI	GAGGAG	1 cut(s)	637
BseSI	GKGCMC	1 cut(s)	698
BseXI	GCAGC	1 cut(s)	51
Bsh1236I	CGCG	1 cut(s)	753
BshFI	GGCC	3 cut(s)	255, 592, 634
BshNI	GGYRCC	3 cut(s)	266, 331, 695
BshVI	ATCGAT	1 cut(s)	573
BsiHKCI	CYCGRG	1 cut(s)	43
BsiSI	CCGG	2 cut(s)	264, 588
BslFI	GGGAC	3 cut(s)	142, 394, 769
BslI	CCNNNNNNNGG	3 cut(s)	397, 599, 692
BsmFI	GGGAC	3 cut(s)	142, 394, 769
BsnI	GGCC	3 cut(s)	255, 592, 634
BsoBI	CYCGRG	1 cut(s)	43
Bsp1286I	GDGCHC	1 cut(s)	698
Bsp143I	GATC	7 cut(s)	7, 362, 440, 452, 459, 468, 570
BspACI	CCGC	4 cut(s)	282, 378, 414, 751
BspANI	GGCC	3 cut(s)	255, 592, 634
BspCNI	CTCAG	1 cut(s)	76
BspDI	ATCGAT	1 cut(s)	573
BspFNI	CGCG	1 cut(s)	753
BspLI	GGNNCC	5 cut(s)	268, 333, 364, 626, 697
BspMI	ACCTGC	2 cut(s)	343, 671
BspPI	GGATC	3 cut(s)	357, 370, 448
BspQI	GCTCTTC	1 cut(s)	82
BspT107I	GGYRCC	3 cut(s)	266, 331, 695
BsrDI	GCAATG	1 cut(s)	471
BsrI	ACTGG	4 cut(s)	320, 434, 543, 593
BssECI	CCNNGG	2 cut(s)	200, 628
BssMI	GATC	7 cut(s)	7, 362, 440, 452, 459, 468, 570
BssNI	GRCGYC	1 cut(s)	267
BssT1I	CCWWGG	1 cut(s)	628
Bst2UI	CCWGG	1 cut(s)	201
Bst4CI	ACNGT	4 cut(s)	185, 292, 666, 700
Bst6I	CTCTTC	1 cut(s)	82
BstACI	GRCGYC	1 cut(s)	267
BstAPI	GCANNNNNTGC	1 cut(s)	548
BstC8I	GCNNGC	2 cut(s)	376, 636
BstDEI	CTNAG	1 cut(s)	84
BstF5I	GGATG	1 cut(s)	366
BstFNI	CGCG	1 cut(s)	753
BstH2I	RGCGCY	1 cut(s)	270
BstHHI	GCGC	2 cut(s)	269, 352
BstKTI	GATC	7 cut(s)	10, 365, 443, 455, 462, 471, 573
BstMBI	GATC	7 cut(s)	7, 362, 440, 452, 459, 468, 570
BstMWI	GCNNNNNNNGC	1 cut(s)	548
BstNI	CCWGG	1 cut(s)	201
BstSCI	CCNGG	2 cut(s)	199, 587
BstSFI	CTRYAG	1 cut(s)	552
BstSLI	GKGCMC	1 cut(s)	698
BstUI	CGCG	1 cut(s)	753
BstV1I	GCAGC	1 cut(s)	51
BstV2I	GAAGAC	1 cut(s)	571
BstX2I	RGATCY	1 cut(s)	362
BstYI	RGATCY	1 cut(s)	362
Bsu15I	ATCGAT	1 cut(s)	573
BsuRI	GGCC	3 cut(s)	255, 592, 634
BsuTUI	ATCGAT	1 cut(s)	573
BtsCI	GGATG	1 cut(s)	366
BtsI	GCAGTG	1 cut(s)	174
BtsIMutI	CAGTG	1 cut(s)	174
BveI	ACCTGC	2 cut(s)	343, 671
Cac8I	GCNNGC	2 cut(s)	376, 636
CfoI	GCGC	2 cut(s)	269, 352
Cfr13I	GGNCC	3 cut(s)	590, 632, 683
ClaI	ATCGAT	1 cut(s)	573
CseI	GACGC	1 cut(s)	391
Csp6I	GTAC	4 cut(s)	48, 404, 426, 701
CviAII	CATG	2 cut(s)	16, 238
CviJI	RGCY	7 cut(s)	14, 42, 255, 527, 592, 627, 634
CviKI_1	RGCY	7 cut(s)	14, 42, 255, 527, 592, 627, 634
CviQI	GTAC	4 cut(s)	48, 404, 426, 701
DdeI	CTNAG	1 cut(s)	84
DinI	GGCGCC	1 cut(s)	268
DpnI	GATC	7 cut(s)	9, 364, 442, 454, 461, 470, 572
DpnII	GATC	7 cut(s)	7, 362, 440, 452, 459, 468, 570
EaeI	YGGCCR	1 cut(s)	253
Eam1104I	CTCTTC	1 cut(s)	82
EarI	CTCTTC	1 cut(s)	82
Eco130I	CCWWGG	1 cut(s)	628
Eco47I	GGWCC	1 cut(s)	683
Eco88I	CYCGRG	1 cut(s)	43
EcoRII	CCWGG	1 cut(s)	199
EcoT14I	CCWWGG	1 cut(s)	628
EgeI	GGCGCC	1 cut(s)	268
EheI	GGCGCC	1 cut(s)	268
ErhI	CCWWGG	1 cut(s)	628
FaeI	CATG	2 cut(s)	19, 241
FaqI	GGGAC	3 cut(s)	142, 394, 769
FatI	CATG	2 cut(s)	15, 237
FauI	CCCGC	2 cut(s)	289, 371
FbaI	TGATCA	2 cut(s)	7, 459
Fnu4HI	GCNGC	1 cut(s)	40
FokI	GGATG	1 cut(s)	353
Fsp4HI	GCNGC	1 cut(s)	40
FspBI	CTAG	1 cut(s)	629
GlaI	GCGC	2 cut(s)	268, 351
GluI	GCNGC	1 cut(s)	40
HaeII	RGCGCY	1 cut(s)	270
HaeIII	GGCC	3 cut(s)	255, 592, 634
HapII	CCGG	2 cut(s)	264, 588
HgaI	GACGC	1 cut(s)	391
HhaI	GCGC	2 cut(s)	269, 352
Hin1I	GRCGYC	1 cut(s)	267
Hin1II	CATG	2 cut(s)	19, 241
Hin6I	GCGC	2 cut(s)	267, 350
HinP1I	GCGC	2 cut(s)	267, 350
HincII	GTYRAC	1 cut(s)	759
HindII	GTYRAC	1 cut(s)	759
HinfI	GANTC	1 cut(s)	613
HpaI	GTTAAC	1 cut(s)	759
HpaII	CCGG	2 cut(s)	264, 588
HphI	GGTGA	3 cut(s)	133, 280, 286
Hpy166II	GTNNAC	1 cut(s)	759
Hpy188I	TCNGA	3 cut(s)	7, 85, 445
Hpy8I	GTNNAC	1 cut(s)	759
HpyAV	CCTTC	3 cut(s)	26, 401, 784
HpyCH4III	ACNGT	4 cut(s)	185, 292, 666, 700
HpyCH4IV	ACGT	1 cut(s)	402
HpyCH4V	TGCA	5 cut(s)	116, 209, 374, 649, 680
HpyF10VI	GCNNNNNNNGC	1 cut(s)	548
HpyF3I	CTNAG	1 cut(s)	84
HpySE526I	ACGT	1 cut(s)	402
Hsp92I	GRCGYC	1 cut(s)	267
Hsp92II	CATG	2 cut(s)	19, 241
HspAI	GCGC	2 cut(s)	267, 350
KasI	GGCGCC	1 cut(s)	266
Ksp22I	TGATCA	2 cut(s)	7, 459
KspAI	GTTAAC	1 cut(s)	759
Kzo9I	GATC	7 cut(s)	7, 362, 440, 452, 459, 468, 570
LguI	GCTCTTC	1 cut(s)	82
LmnI	GCTCC	1 cut(s)	624
Lsp1109I	GCAGC	1 cut(s)	51
LweI	GCATC	2 cut(s)	614, 636
MaeI	CTAG	1 cut(s)	629
MaeII	ACGT	1 cut(s)	402
MaeIII	GTNAC	3 cut(s)	190, 286, 292
MalI	GATC	7 cut(s)	9, 364, 442, 454, 461, 470, 572
MboI	GATC	7 cut(s)	7, 362, 440, 452, 459, 468, 570
MboII	GAAGA	4 cut(s)	41, 69, 72, 571
MfeI	CAATTG	1 cut(s)	639
MflI	RGATCY	1 cut(s)	362
MhlI	GDGCHC	1 cut(s)	698
MlsI	TGGCCA	1 cut(s)	255
MluCI	AATT	7 cut(s)	61, 111, 210, 225, 546, 639, 721
MluNI	TGGCCA	1 cut(s)	255
Mly113I	GGCGCC	1 cut(s)	267
MmeI	TCCRAC	1 cut(s)	418
MnlI	CCTC	6 cut(s)	112, 322, 345, 487, 615, 797
Mox20I	TGGCCA	1 cut(s)	255
MscI	TGGCCA	1 cut(s)	255
MseI	TTAA	3 cut(s)	224, 276, 758
Msp20I	TGGCCA	1 cut(s)	255
MspA1I	CMGCKG	1 cut(s)	284
MspI	CCGG	2 cut(s)	264, 588
MspR9I	CCNGG	2 cut(s)	201, 589
MunI	CAATTG	1 cut(s)	639
MvaI	CCWGG	1 cut(s)	201
MvnI	CGCG	1 cut(s)	753
MwoI	GCNNNNNNNGC	1 cut(s)	548
NarI	GGCGCC	1 cut(s)	267
NciI	CCSGG	1 cut(s)	589
NdeII	GATC	7 cut(s)	7, 362, 440, 452, 459, 468, 570
NlaIII	CATG	2 cut(s)	19, 241
NlaIV	GGNNCC	5 cut(s)	268, 333, 364, 626, 697
NmuCI	GTSAC	2 cut(s)	286, 292
PaqCI	CACCTGC	1 cut(s)	343
PciSI	GCTCTTC	1 cut(s)	82
PcsI	WCGNNNNNNNCGW	1 cut(s)	579
PfeI	GAWTC	1 cut(s)	613
PkrI	GCNGC	1 cut(s)	41
PluTI	GGCGCC	1 cut(s)	270
PshBI	ATTAAT	1 cut(s)	224
Psp6I	CCWGG	1 cut(s)	199
PspGI	CCWGG	1 cut(s)	199
PspN4I	GGNNCC	5 cut(s)	268, 333, 364, 626, 697
PspPI	GGNCC	3 cut(s)	590, 632, 683
PsuI	RGATCY	1 cut(s)	362
RsaI	GTAC	4 cut(s)	49, 405, 427, 702
RsaNI	GTAC	4 cut(s)	48, 404, 426, 701
SapI	GCTCTTC	1 cut(s)	82
SaqAI	TTAA	3 cut(s)	224, 276, 758
SatI	GCNGC	1 cut(s)	40
Sau3AI	GATC	7 cut(s)	7, 362, 440, 452, 459, 468, 570
Sau96I	GGNCC	3 cut(s)	590, 632, 683
ScrFI	CCNGG	2 cut(s)	201, 589
SduI	GDGCHC	1 cut(s)	698
SfaNI	GCATC	2 cut(s)	614, 636
SfcI	CTRYAG	1 cut(s)	552
SfoI	GGCGCC	1 cut(s)	268
SinI	GGWCC	1 cut(s)	683
Sse9I	AATT	7 cut(s)	61, 111, 210, 225, 546, 639, 721
SsiI	CCGC	4 cut(s)	282, 378, 414, 751
SspDI	GGCGCC	1 cut(s)	266
SspMI	CTAG	1 cut(s)	629
StyD4I	CCNGG	2 cut(s)	199, 587
StyI	CCWWGG	1 cut(s)	628
TaaI	ACNGT	4 cut(s)	185, 292, 666, 700
TaiI	ACGT	1 cut(s)	405
TaqI	TCGA	2 cut(s)	451, 573
TasI	AATT	7 cut(s)	61, 111, 210, 225, 546, 639, 721
TfiI	GAWTC	1 cut(s)	613
Tru1I	TTAA	3 cut(s)	224, 276, 758
Tru9I	TTAA	3 cut(s)	224, 276, 758
TscAI	CASTG	1 cut(s)	174
TseFI	GTSAC	2 cut(s)	286, 292
TseI	GCWGC	1 cut(s)	39
Tsp45I	GTSAC	2 cut(s)	286, 292
TspDTI	ATGAA	3 cut(s)	32, 626, 766
TspGWI	ACGGA	1 cut(s)	238
TspRI	CASTG	1 cut(s)	174
VpaK11BI	GGWCC	1 cut(s)	683
VspI	ATTAAT	1 cut(s)	224
XapI	RAATTY	1 cut(s)	61
XcmI	CCANNNNNNNNNTGG	1 cut(s)	22
XmaJI	CCTAGG	1 cut(s)	628
XspI	CTAG	1 cut(s)	629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.