Prupe.1G344600_v2.0.a1

Domain of unknown function (DUF3067)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
32276801 .. 32278286
1486 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G344600.1

Sequence Viewer

Length: 681 bp
ATGACGAGCATTATTTCAAGCCACCACTGTAATTGGTCATTTGGGGTTCAGGAGAACCTAAACACAGGAATGGGATTCAACAAAGTTGTACTTCCTGGATATAATGGTTCGTATTTTCCTTCAAGAGGAGGATTGGTTTTTTCCACTGGTAATTGTCACATCCGTTATCACAGTGATCGGAGACATAGGCCTATCTTTTCAAGTACAACAGATGATGGCATAAATCCAGATGACTCAGAAGATCCAAATGATGCAAAAGATTCTTCTCCCAAACCTGAAACTGGAGGGGTGAATAGTGAAATGCTTAGAGAGAATCTTGAAAGACTTGTTGGAACAGATGATTCCTCCTTCAGTGGGATAGACCTGGCAACTCTTATTAGGAACAAGTATGGGAGGTCTTACGACGTTCAACTCATAAAGAAGGAGTTCCTTGGAAGAAATCTCCTTGCTTTGAATGTCATGTGGAAGTATATGGAGCAGAGATCCTTTCCACTGACTGAAGAAGAGTATCTATTGAGGCTTGACGATGTGGCAAACACCTTGAAATGCTGGGGAGCTGTGTCGCATATCCGAAACAGCCTAGCAAAGCTCAAAGAGAGGCCTCGGATAGGAAAGGCAGTGAGCATTTTTATCGATATGGACGAGTCTGGAGGGCGTGCAAATGAATGGATTTACAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

227

Amino Acids

25.57

Weight (kDa)

6.31

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 236, 477
AcuI CTGAAG 2 cut(s) 334, 519
AfaI GTAC 2 cut(s) 90, 205
AfiI CCNNNNNNNGG 4 cut(s) 125, 281, 354, 608
AgsI TTSAA 8 cut(s) 18, 79, 123, 201, 320, 410, 454, 544
AjnI CCWGG 2 cut(s) 94, 363
AjuI GAANNNNNNNTTGG 2 cut(s) 312, 344
AluBI AGCT 2 cut(s) 557, 589
AluI AGCT 2 cut(s) 557, 589
Alw26I GTCTC 1 cut(s) 175
AlwI GGATC 2 cut(s) 236, 477
AoxI GGCC 2 cut(s) 188, 599
Asp700I GAANNNNTTC 1 cut(s) 425
AsuHPI GGTGA 1 cut(s) 301
BccI CCATC 1 cut(s) 209
BcgI CGANNNNNNTGC 2 cut(s) 613, 647
BciT130I CCWGG 2 cut(s) 96, 365
BcoDI GTCTC 1 cut(s) 175
BfaI CTAG 1 cut(s) 581
Bme1390I CCNGG 2 cut(s) 96, 365
BmrFI CCNGG 2 cut(s) 96, 365
BmsI GCATC 1 cut(s) 241
BpmI CTGGAG 2 cut(s) 303, 669
Bsa29I ATCGAT 1 cut(s) 633
BsaJI CCNNGG 2 cut(s) 430, 602
BsaXI ACNNNNNCTCC 2 cut(s) 120, 150
Bsc4I CCNNNNNNNGG 4 cut(s) 125, 281, 354, 608
Bse1I ACTGG 2 cut(s) 151, 286
BseBI CCWGG 2 cut(s) 96, 365
BseCI ATCGAT 1 cut(s) 633
BseDI CCNNGG 2 cut(s) 430, 602
BseGI GGATG 1 cut(s) 159
BseLI CCNNNNNNNGG 4 cut(s) 125, 281, 354, 608
BseMII CTCAG 1 cut(s) 249
BseNI ACTGG 2 cut(s) 151, 286
BseRI GAGGAG 1 cut(s) 141
BseYI CCCAGC 1 cut(s) 549
BshFI GGCC 2 cut(s) 190, 601
BshVI ATCGAT 1 cut(s) 633
BslI CCNNNNNNNGG 4 cut(s) 125, 281, 354, 608
BsmAI GTCTC 1 cut(s) 175
BsnI GGCC 2 cut(s) 190, 601
Bsp143I GATC 3 cut(s) 175, 241, 482
BspANI GGCC 2 cut(s) 190, 601
BspCNI CTCAG 1 cut(s) 248
BspDI ATCGAT 1 cut(s) 633
BspPI GGATC 2 cut(s) 236, 477
BsrI ACTGG 2 cut(s) 151, 286
BssECI CCNNGG 2 cut(s) 430, 602
BssMI GATC 3 cut(s) 175, 241, 482
BssT1I CCWWGG 1 cut(s) 430
Bst2UI CCWGG 2 cut(s) 96, 365
Bst4CI ACNGT 2 cut(s) 29, 173
Bst6I CTCTTC 1 cut(s) 498
BstC8I GCNNGC 1 cut(s) 657
BstDEI CTNAG 2 cut(s) 235, 305
BstENI CCTNNNNNAGG 2 cut(s) 123, 606
BstF5I GGATG 1 cut(s) 159
BstKTI GATC 3 cut(s) 178, 244, 485
BstMAI GTCTC 1 cut(s) 175
BstMBI GATC 3 cut(s) 175, 241, 482
BstNI CCWGG 2 cut(s) 96, 365
BstSCI CCNGG 2 cut(s) 94, 363
BstX2I RGATCY 2 cut(s) 241, 482
BstYI RGATCY 2 cut(s) 241, 482
Bsu15I ATCGAT 1 cut(s) 633
BsuRI GGCC 2 cut(s) 190, 601
BsuTUI ATCGAT 1 cut(s) 633
BtsCI GGATG 1 cut(s) 159
BtsI GCAGTG 1 cut(s) 624
BtsIMutI CAGTG 6 cut(s) 25, 144, 178, 358, 491, 624
Cac8I GCNNGC 1 cut(s) 657
ClaI ATCGAT 1 cut(s) 633
Csp6I GTAC 2 cut(s) 89, 204
CspCI CAANNNNNGTGG 2 cut(s) 14, 49
CviAII CATG 1 cut(s) 460
CviJI RGCY 7 cut(s) 21, 190, 520, 557, 579, 589, 601
CviKI_1 RGCY 7 cut(s) 21, 190, 520, 557, 579, 589, 601
CviQI GTAC 2 cut(s) 89, 204
DdeI CTNAG 2 cut(s) 235, 305
DpnI GATC 3 cut(s) 177, 243, 484
DpnII GATC 3 cut(s) 175, 241, 482
Eam1104I CTCTTC 1 cut(s) 498
EarI CTCTTC 1 cut(s) 498
Eco130I CCWWGG 1 cut(s) 430
Eco147I AGGCCT 2 cut(s) 190, 601
Eco57I CTGAAG 2 cut(s) 334, 519
EcoNI CCTNNNNNAGG 2 cut(s) 123, 606
EcoRII CCWGG 2 cut(s) 94, 363
EcoT14I CCWWGG 1 cut(s) 430
ErhI CCWWGG 1 cut(s) 430
FaeI CATG 1 cut(s) 463
FalI AAGNNNNNCTT 2 cut(s) 75, 107
FatI CATG 1 cut(s) 459
FokI GGATG 1 cut(s) 146
FspBI CTAG 1 cut(s) 581
GsaI CCCAGC 1 cut(s) 553
GsuI CTGGAG 2 cut(s) 303, 669
HaeIII GGCC 2 cut(s) 190, 601
Hin1II CATG 1 cut(s) 463
HinfI GANTC 6 cut(s) 75, 233, 260, 313, 341, 644
HphI GGTGA 1 cut(s) 301
Hpy188I TCNGA 4 cut(s) 180, 238, 572, 606
Hpy188III TCNNGA 5 cut(s) 50, 123, 227, 317, 648
Hpy99I CGWCG 1 cut(s) 407
HpyAV CCTTC 3 cut(s) 129, 358, 415
HpyCH4III ACNGT 2 cut(s) 29, 173
HpyCH4IV ACGT 1 cut(s) 405
HpyCH4V TGCA 2 cut(s) 254, 659
HpyF3I CTNAG 2 cut(s) 235, 305
HpySE526I ACGT 1 cut(s) 405
Hsp92II CATG 1 cut(s) 463
Kzo9I GATC 3 cut(s) 175, 241, 482
LmnI GCTCC 2 cut(s) 475, 554
LweI GCATC 1 cut(s) 241
MaeI CTAG 1 cut(s) 581
MaeII ACGT 1 cut(s) 405
MaeIII GTNAC 1 cut(s) 155
MalI GATC 3 cut(s) 177, 243, 484
MboI GATC 3 cut(s) 175, 241, 482
MboII GAAGA 5 cut(s) 251, 255, 447, 512, 515
MflI RGATCY 2 cut(s) 241, 482
MluCI AATT 2 cut(s) 31, 151
MlyI GAGTC 2 cut(s) 227, 653
MmeI TCCRAC 1 cut(s) 310
MnlI CCTC 9 cut(s) 119, 122, 278, 355, 387, 510, 591, 612, 644
MroXI GAANNNNTTC 1 cut(s) 425
MslI CAYNNNNRTG 1 cut(s) 68
MspR9I CCNGG 2 cut(s) 96, 365
MvaI CCWGG 2 cut(s) 96, 365
NdeII GATC 3 cut(s) 175, 241, 482
NlaIII CATG 1 cut(s) 463
NmuCI GTSAC 1 cut(s) 155
PceI AGGCCT 2 cut(s) 190, 601
PcsI WCGNNNNNNNCGW 1 cut(s) 639
PdmI GAANNNNTTC 1 cut(s) 425
PfeI GAWTC 4 cut(s) 75, 260, 313, 341
PfoI TCCNGGA 1 cut(s) 94
PleI GAGTC 2 cut(s) 227, 652
PpsI GAGTC 2 cut(s) 227, 652
Psp6I CCWGG 2 cut(s) 94, 363
PspFI CCCAGC 1 cut(s) 549
PspGI CCWGG 2 cut(s) 94, 363
PsuI RGATCY 2 cut(s) 241, 482
RsaI GTAC 2 cut(s) 90, 205
RsaNI GTAC 2 cut(s) 89, 204
RseI CAYNNNNRTG 1 cut(s) 68
Sau3AI GATC 3 cut(s) 175, 241, 482
SchI GAGTC 2 cut(s) 227, 653
ScrFI CCNGG 2 cut(s) 96, 365
SetI ASST 8 cut(s) 60, 277, 366, 398, 408, 542, 559, 591
SfaNI GCATC 1 cut(s) 241
SmiMI CAYNNNNRTG 1 cut(s) 68
Sse9I AATT 2 cut(s) 31, 151
SseBI AGGCCT 2 cut(s) 190, 601
SspMI CTAG 1 cut(s) 581
StuI AGGCCT 2 cut(s) 190, 601
StyD4I CCNGG 2 cut(s) 94, 363
StyI CCWWGG 1 cut(s) 430
TaaI ACNGT 2 cut(s) 29, 173
TaiI ACGT 1 cut(s) 408
TaqI TCGA 1 cut(s) 633
TasI AATT 2 cut(s) 31, 151
TatI WGTACW 2 cut(s) 88, 203
TfiI GAWTC 4 cut(s) 75, 260, 313, 341
TscAI CASTG 6 cut(s) 32, 151, 178, 358, 498, 624
TseFI GTSAC 1 cut(s) 155
Tsp45I GTSAC 1 cut(s) 155
TspDTI ATGAA 1 cut(s) 678
TspGWI ACGGA 1 cut(s) 152
TspRI CASTG 6 cut(s) 32, 151, 178, 358, 498, 624
XagI CCTNNNNNAGG 2 cut(s) 123, 606
XmnI GAANNNNTTC 1 cut(s) 425
XspI CTAG 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.