Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0007081

Physical Location & Seq

Genomic Coordinates Forward (+)

69004196 .. 69008534

Gene Structure 4339 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG458800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGACCTTTGCCGTTTCCGGTTTCGGTAATTTTCCCGCCAATCAGATACGAGCTTTGGCGCCAATTCACAAAGCAGCCTATGATCATATCATTAGGGTAAGAGGCCATTCCTTCGCCGTCGCTAATCCCAAGGGAGCAGCAATGGGTTCCAGAGCTGCCACCAAAAACAAAACCCTACTGGATATCTTCCAACCCACGACCCGATCCGCCAAACGCTTCAAAACCGATTCTTCCAGCCCCAAATCCGATGACGCCATCACCGAGCCTTCTTCTTCTTCTCCGTCAGCCCTCACCCCCGAGCAGAAGTCACGCATAGAATTCCAGAAGCTGCTGGCCAAAGCGAAACGCAACCGCACTATCTGCTCCGGCAGAGTCTCCGATTCCAAGGCCAGAGGTGAAGGAGTGAAATTGGAGGAGCTATTGGTGGAGGACACGTGGCTGACGGCGTTGCCTTCTGAGCTTAAGAAGCCCTACGCCGTCAACCTCAGCAAGTTCGTTGAGAGTGAGATTTCCGGCGCCGGCGGTGGTGGTGTTCCGATATATCCGCCGAGTCACTTGATCTTCAATGCTCTGAACTCCACCCCTTTTGATCGGGTCAAGGCTGTCATTTTGGGCCAGGACCCGTATCATGGGCCGGGTCAGGCTATGGGTCTGTCCTTCTCTGTTCCACAAGGAGTGAAGGTCCCATCGAGCCTGGTTAATATATTCAAGGAGCTTCACAAAGATGTTGGCTGTTCAATTCCATCTCATGGAAATCTAGAAAAATGGGCTGTTCAGGGTGTTCTGTTGCTCAATGCTGTTCTCACCGTTAGGGATCATCAGGCTAACTCTCATGCAAAGAAAGGATGGGAACAATTTACGGATGCTGTTATCCAAACGATTTCAAAAAAGAAGGAAGGAGTTGTTTTCCTCCTGTGGGGAAACTCCGCACAGCAGAAATCCAGGTTAGTTGATGTGTCGAAGCATCACATTCTTAGAGCGGCACATCCTTCCGGTTTATCTGCATACAGGGGCTTCTTTGGCTGCAGGCATTTTTCTCGCACGAACCAGCTTCTCAAGGAGATGGACTATCGCTGTCAAGTCATTCTACTCTACCATATCCCAAACAAGCATCAAACCCAGAAACTATATCTGCTTCAGTTGGCTTGGCCTCACCAACAGGATATGACGAGCATTATTTCAAGCCACCATTGTAATTGGTCATTTGGGATTCAAGAGAACGCTAACACAGGATTCAACAAAGTTCTGCTTCCTGGATATACTTCACATTTTCCTTCAAGAGGATTGGTTTTTTCCAATGGTAACTATCACATTCGTTGTCAAACTGATCGGAGATGTAGGCCTATTTTCTCCAGTACGGTAGATGACATAAATCCAGATGACTCTGAAGATGAAAAGGATGCGAAGGAAAATTCCAAAGCTGAAGCTGGAGGGGGGAATAATGAAATGGTCAGAGAGAATCTTGAAAGACTTGTTGGTACAGATGACTCCAGCTTTAGTGGGATAGACCTGGCAACTCTTATTAGGAACAAGTATGGGAGGTCCTATGATGTTCAACTGATAAAGAAGGAGTTCCTGGGAAGAAACCTCTTGGCTATGAATGTGATGTGGAAGTACAGGGAGCAGAGATCCTTTCCACTGACTGAAGAAGAGTATCTATTGAGGCTTGATGATGTTGCAAACAACTTGAAGTGCTGGGGAGCTGTGTCACATATCAGAAACAGCCTAGCAACGGTGAAAGAGAGGCCTCGGATAGGAAAGGCTGTTAGCATTTTTATAGATATGGACGAGTCTGGAGGCCGTGCAAATGAATGGATTTACAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004844 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009987 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0097506 GO:0097510 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03410 ko05340 map03410 map05340

Pfam Domains

Protein Families

UDG

Protein Analysis

608

Amino Acids

67.76

Weight (kDa)

9.38

Isoelectric Point (pI)

40.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDG	PF03167	198 - 353	5.7e-15	Uracil DNA glycosylase superfamily
DUF3067	PF11267	503 - 606	1.9e-33	Domain of unknown function (DUF3067)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007081)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19900 AT3G19900
fragaria_vesca	FvH4_4g36660 FvH4_4g36660 FvH4_4g36660
malus_domestica	MD16G1006000.v1.1
prunus_persica	Prupe.1G344600_v2.0.a1
pyrus_communis	pycom16g00580
rosa_chinensis	RchiOBHm_Chr4g0446361 RchiOBHm_Chr4g0446371
rosa_laevigata	RLG00000005668
rosa_multiflora	Rmu_co8384533.1_g000001 Rmu_co8420189.1_g000001 Rmu_sc0008360.1_g000001 Rmu_sc0010778.1_g000002
rosa_roxburghii	Rroxscaffold_5G00386800 Rroxscaffold_5G00386810
rosa_rugosa	Rorug04G0370700 Rorug04G0370800
rosa_samantha	Rh4AG432300 Rh4BG441500 Rh4CG458800 Rh4DG440200
rosa_wichuraiana	Rw4G036910 Rw4G036920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	58, 515
AccB7I	CCANNNNNTGG	1 cut(s)	749
AccBSI	CCGCTC	1 cut(s)	980
AciI	CCGC	7 cut(s)	36, 207, 352, 522, 545, 927, 980
AclWI	GGATC	3 cut(s)	198, 822, 1623
AcoI	YGGCCR	1 cut(s)	333
AcsI	RAATTY	2 cut(s)	317, 1411
AcuI	CTGAAG	4 cut(s)	1121, 1407, 1443, 1665
AcvI	CACGTG	1 cut(s)	435
AcyI	GRCGYC	3 cut(s)	59, 252, 516
AfaI	GTAC	3 cut(s)	1357, 1480, 1616
AfiI	CCNNNNNNNGG	6 cut(s)	629, 749, 916, 1280, 1732, 1754
AflII	CTTAAG	1 cut(s)	461
AflIII	ACRYGT	1 cut(s)	432
AjnI	CCWGG	6 cut(s)	615, 693, 941, 1252, 1509, 1575
AjuI	GAANNNNNNNTTGG	2 cut(s)	1458, 1490
Alw26I	GTCTC	1 cut(s)	379
AlwI	GGATC	3 cut(s)	198, 822, 1623
AlwNI	CAGNNNCTG	1 cut(s)	328
Ama87I	CYCGRG	1 cut(s)	296
AoxI	GGCC	9 cut(s)	103, 333, 387, 613, 632, 1148, 1340, 1745, 1798
ApeKI	GCWGC	5 cut(s)	74, 137, 155, 328, 1023
ApoI	RAATTY	2 cut(s)	317, 1411
Asp700I	GAANNNNTTC	1 cut(s)	1571
AspLEI	GCGC	2 cut(s)	61, 518
AspS9I	GGNCC	5 cut(s)	613, 619, 632, 682, 1542
AsuC2I	CCSGG	1 cut(s)	636
AsuHPI	GGTGA	6 cut(s)	250, 283, 407, 796, 1145, 1747
AvaI	CYCGRG	1 cut(s)	296
AvaII	GGWCC	3 cut(s)	619, 682, 1542
BalI	TGGCCA	1 cut(s)	335
BanI	GGYRCC	2 cut(s)	58, 515
BbrPI	CACGTG	1 cut(s)	435
BbvCI	CCTCAGC	1 cut(s)	485
BbvI	GCAGC	5 cut(s)	86, 142, 149, 315, 1010
BccI	CCATC	5 cut(s)	263, 694, 751, 840, 1057
BceAI	ACGGC	4 cut(s)	101, 459, 461, 1785
BcgI	CGANNNNNNTGC	2 cut(s)	1019, 1053
BciT130I	CCWGG	6 cut(s)	617, 695, 943, 1254, 1511, 1577
BclI	TGATCA	1 cut(s)	82
BcnI	CCSGG	1 cut(s)	636
BcoDI	GTCTC	1 cut(s)	379
BfaI	CTAG	2 cut(s)	758, 1727
BfmI	CTRYAG	1 cut(s)	1024
BfoI	RGCGCY	2 cut(s)	62, 519
BfrI	CTTAAG	1 cut(s)	461
BisI	GCNGC	6 cut(s)	75, 138, 156, 329, 981, 1024
BlsI	GCNGC	6 cut(s)	76, 139, 157, 330, 982, 1025
Bme1390I	CCNGG	7 cut(s)	617, 636, 695, 943, 1254, 1511, 1577
Bme18I	GGWCC	3 cut(s)	619, 682, 1542
BmeT110I	CYCGRG	1 cut(s)	296
BmgT120I	GGNCC	5 cut(s)	613, 619, 632, 682, 1542
BmiI	GGNNCC	5 cut(s)	60, 148, 517, 621, 684
BmrFI	CCNGG	7 cut(s)	617, 636, 695, 943, 1254, 1511, 1577
BmsI	GCATC	4 cut(s)	853, 973, 1120, 1390
BpmI	CTGGAG	4 cut(s)	1336, 1449, 1474, 1815
Bpu10I	CCTNAGC	1 cut(s)	485
BpuEI	CTTGAG	1 cut(s)	1040
BpuMI	CCSGG	1 cut(s)	636
BsaAI	YACGTR	1 cut(s)	435
BsaHI	GRCGYC	3 cut(s)	59, 252, 516
BsaJI	CCNNGG	4 cut(s)	129, 384, 1576, 1748
BsaWI	WCCGGW	2 cut(s)	17, 992
BsaXI	ACNNNNNCTCC	4 cut(s)	419, 449, 666, 696
Bsc4I	CCNNNNNNNGG	6 cut(s)	629, 749, 916, 1280, 1732, 1754
Bse118I	RCCGGY	1 cut(s)	518
Bse1I	ACTGG	2 cut(s)	183, 1353
Bse3DI	GCAATG	1 cut(s)	147
BseBI	CCWGG	6 cut(s)	617, 695, 943, 1254, 1511, 1577
BseDI	CCNNGG	4 cut(s)	129, 384, 1576, 1748
BseGI	GGATG	4 cut(s)	851, 868, 985, 1405
BseLI	CCNNNNNNNGG	6 cut(s)	629, 749, 916, 1280, 1732, 1754
BseMI	GCAATG	1 cut(s)	147
BseMII	CTCAG	2 cut(s)	447, 499
BseNI	ACTGG	2 cut(s)	183, 1353
BseRI	GAGGAG	1 cut(s)	428
BseXI	GCAGC	5 cut(s)	86, 142, 149, 315, 1010
BseYI	CCCAGC	1 cut(s)	1695
BshFI	GGCC	9 cut(s)	105, 335, 389, 615, 634, 1150, 1342, 1747, 1800
BshNI	GGYRCC	2 cut(s)	58, 515
BsiHKCI	CYCGRG	1 cut(s)	296
BsiSI	CCGG	6 cut(s)	18, 366, 513, 519, 635, 993
BslFI	GGGAC	1 cut(s)	668
BslI	CCNNNNNNNGG	6 cut(s)	629, 749, 916, 1280, 1732, 1754
BsmAI	GTCTC	1 cut(s)	379
BsmFI	GGGAC	1 cut(s)	668
BsnI	GGCC	9 cut(s)	105, 335, 389, 615, 634, 1150, 1342, 1747, 1800
BsoBI	CYCGRG	1 cut(s)	296
Bsp143I	GATC	7 cut(s)	82, 203, 558, 589, 814, 1327, 1628
BspACI	CCGC	7 cut(s)	36, 207, 352, 522, 545, 927, 980
BspANI	GGCC	9 cut(s)	105, 335, 389, 615, 634, 1150, 1342, 1747, 1800
BspCNI	CTCAG	2 cut(s)	448, 498
BspLI	GGNNCC	5 cut(s)	60, 148, 517, 621, 684
BspMAI	CTGCAG	1 cut(s)	1028
BspPI	GGATC	3 cut(s)	198, 822, 1623
BspT107I	GGYRCC	2 cut(s)	58, 515
BspTI	CTTAAG	1 cut(s)	461
BsrBI	CCGCTC	1 cut(s)	980
BsrDI	GCAATG	1 cut(s)	147
BsrFI	RCCGGY	1 cut(s)	518
BsrI	ACTGG	2 cut(s)	183, 1353
BssAI	RCCGGY	1 cut(s)	518
BssECI	CCNNGG	4 cut(s)	129, 384, 1576, 1748
BssMI	GATC	7 cut(s)	82, 203, 558, 589, 814, 1327, 1628
BssNI	GRCGYC	3 cut(s)	59, 252, 516
BssT1I	CCWWGG	2 cut(s)	129, 384
Bst2UI	CCWGG	6 cut(s)	617, 695, 943, 1254, 1511, 1577
Bst4CI	ACNGT	3 cut(s)	808, 1360, 1735
Bst6I	CTCTTC	1 cut(s)	1644
BstACI	GRCGYC	3 cut(s)	59, 252, 516
BstAFI	CTTAAG	1 cut(s)	461
BstAPI	GCANNNNNTGC	1 cut(s)	360
BstBAI	YACGTR	1 cut(s)	435
BstC8I	GCNNGC	3 cut(s)	333, 520, 1028
BstDEI	CTNAG	3 cut(s)	456, 485, 974
BstENI	CCTNNNNNAGG	2 cut(s)	1278, 1752
BstF5I	GGATG	4 cut(s)	851, 868, 985, 1405
BstH2I	RGCGCY	2 cut(s)	62, 519
BstHHI	GCGC	2 cut(s)	61, 518
BstKTI	GATC	7 cut(s)	85, 206, 561, 592, 817, 1330, 1631
BstMAI	GTCTC	1 cut(s)	379
BstMBI	GATC	7 cut(s)	82, 203, 558, 589, 814, 1327, 1628
BstMWI	GCNNNNNNNGC	4 cut(s)	360, 457, 466, 1020
BstNI	CCWGG	6 cut(s)	617, 695, 943, 1254, 1511, 1577
BstSCI	CCNGG	7 cut(s)	615, 634, 693, 941, 1252, 1509, 1575
BstSFI	CTRYAG	1 cut(s)	1024
BstV1I	GCAGC	5 cut(s)	86, 142, 149, 315, 1010
BstX2I	RGATCY	1 cut(s)	1628
BstYI	RGATCY	1 cut(s)	1628
BsuRI	GGCC	9 cut(s)	105, 335, 389, 615, 634, 1150, 1342, 1747, 1800
BtsCI	GGATG	4 cut(s)	851, 868, 985, 1405
BtsIMutI	CAGTG	1 cut(s)	1637
Cac8I	GCNNGC	3 cut(s)	333, 520, 1028
CaiI	CAGNNNCTG	1 cut(s)	328
CfoI	GCGC	2 cut(s)	61, 518
Cfr10I	RCCGGY	1 cut(s)	518
Cfr13I	GGNCC	5 cut(s)	613, 619, 632, 682, 1542
CseI	GACGC	1 cut(s)	260
Csp6I	GTAC	3 cut(s)	1356, 1479, 1615
CspCI	CAANNNNNGTGG	2 cut(s)	568, 603
CviAII	CATG	3 cut(s)	629, 749, 833
CviQI	GTAC	3 cut(s)	1356, 1479, 1615
DdeI	CTNAG	3 cut(s)	456, 485, 974
DinI	GGCGCC	2 cut(s)	60, 517
DpnI	GATC	7 cut(s)	84, 205, 560, 591, 816, 1329, 1630
DpnII	GATC	7 cut(s)	82, 203, 558, 589, 814, 1327, 1628
EaeI	YGGCCR	1 cut(s)	333
Eam1104I	CTCTTC	1 cut(s)	1644
EarI	CTCTTC	1 cut(s)	1644
EciI	GGCGGA	2 cut(s)	196, 534
Eco130I	CCWWGG	2 cut(s)	129, 384
Eco147I	AGGCCT	2 cut(s)	1342, 1747
Eco32I	GATATC	1 cut(s)	184
Eco47I	GGWCC	3 cut(s)	619, 682, 1542
Eco57I	CTGAAG	4 cut(s)	1121, 1407, 1443, 1665
Eco72I	CACGTG	1 cut(s)	435
Eco88I	CYCGRG	1 cut(s)	296
EcoNI	CCTNNNNNAGG	2 cut(s)	1278, 1752
EcoO109I	RGGNCCY	3 cut(s)	619, 682, 1542
EcoRI	GAATTC	1 cut(s)	317
EcoRII	CCWGG	6 cut(s)	615, 693, 941, 1252, 1509, 1575
EcoRV	GATATC	1 cut(s)	184
EcoT14I	CCWWGG	2 cut(s)	129, 384
EgeI	GGCGCC	2 cut(s)	60, 517
EheI	GGCGCC	2 cut(s)	60, 517
ErhI	CCWWGG	2 cut(s)	129, 384
FaeI	CATG	3 cut(s)	632, 752, 836
FalI	AAGNNNNNCTT	2 cut(s)	1233, 1265
FaqI	GGGAC	1 cut(s)	668
FatI	CATG	3 cut(s)	628, 748, 832
FauI	CCCGC	1 cut(s)	43
FbaI	TGATCA	1 cut(s)	82
Fnu4HI	GCNGC	6 cut(s)	75, 138, 156, 329, 981, 1024
FokI	GGATG	4 cut(s)	858, 875, 972, 1412
Fsp4HI	GCNGC	6 cut(s)	75, 138, 156, 329, 981, 1024
FspBI	CTAG	2 cut(s)	758, 1727
GlaI	GCGC	2 cut(s)	60, 517
GluI	GCNGC	6 cut(s)	75, 138, 156, 329, 981, 1024
GsaI	CCCAGC	1 cut(s)	1699
GsuI	CTGGAG	4 cut(s)	1336, 1449, 1474, 1815
HaeII	RGCGCY	2 cut(s)	62, 519
HaeIII	GGCC	9 cut(s)	105, 335, 389, 615, 634, 1150, 1342, 1747, 1800
HapII	CCGG	6 cut(s)	18, 366, 513, 519, 635, 993
HgaI	GACGC	1 cut(s)	260
HhaI	GCGC	2 cut(s)	61, 518
Hin1I	GRCGYC	3 cut(s)	59, 252, 516
Hin1II	CATG	3 cut(s)	632, 752, 836
Hin6I	GCGC	2 cut(s)	59, 516
HinP1I	GCGC	2 cut(s)	59, 516
HincII	GTYRAC	1 cut(s)	481
HindII	GTYRAC	1 cut(s)	481
HpaII	CCGG	6 cut(s)	18, 366, 513, 519, 635, 993
HphI	GGTGA	6 cut(s)	250, 283, 407, 796, 1145, 1747
Hpy166II	GTNNAC	1 cut(s)	481
Hpy188III	TCNNGA	8 cut(s)	150, 322, 758, 1214, 1278, 1376, 1463, 1794
Hpy8I	GTNNAC	1 cut(s)	481
Hpy99I	CGWCG	1 cut(s)	122
HpyCH4III	ACNGT	3 cut(s)	808, 1360, 1735
HpyCH4IV	ACGT	1 cut(s)	434
HpyCH4V	TGCA	5 cut(s)	836, 1004, 1026, 1679, 1805
HpyF10VI	GCNNNNNNNGC	4 cut(s)	360, 457, 466, 1020
HpyF3I	CTNAG	3 cut(s)	456, 485, 974
HpySE526I	ACGT	1 cut(s)	434
Hsp92I	GRCGYC	3 cut(s)	59, 252, 516
Hsp92II	CATG	3 cut(s)	632, 752, 836
HspAI	GCGC	2 cut(s)	59, 516
KasI	GGCGCC	2 cut(s)	58, 515
KroI	GCCGGC	1 cut(s)	518
KroNI	GCCGGC	1 cut(s)	520
Ksp22I	TGATCA	1 cut(s)	82
Kzo9I	GATC	7 cut(s)	82, 203, 558, 589, 814, 1327, 1628
LmnI	GCTCC	6 cut(s)	134, 368, 415, 712, 1621, 1700
Lsp1109I	GCAGC	5 cut(s)	86, 142, 149, 315, 1010
LweI	GCATC	4 cut(s)	853, 973, 1120, 1390
MaeI	CTAG	2 cut(s)	758, 1727
MaeII	ACGT	1 cut(s)	434
MaeIII	GTNAC	4 cut(s)	306, 551, 1301, 1707
MalI	GATC	7 cut(s)	84, 205, 560, 591, 816, 1329, 1630
MbiI	CCGCTC	1 cut(s)	980
MboI	GATC	7 cut(s)	82, 203, 558, 589, 814, 1327, 1628
MflI	RGATCY	1 cut(s)	1628
MlsI	TGGCCA	1 cut(s)	335
MluCI	AATT	8 cut(s)	28, 63, 317, 407, 738, 854, 1195, 1411
MluNI	TGGCCA	1 cut(s)	335
Mly113I	GGCGCC	2 cut(s)	59, 516
MlyI	GAGTC	5 cut(s)	381, 559, 1376, 1481, 1799
MmeI	TCCRAC	1 cut(s)	214
Mox20I	TGGCCA	1 cut(s)	335
MreI	CGCCGGCG	1 cut(s)	518
MroNI	GCCGGC	1 cut(s)	518
MroXI	GAANNNNTTC	1 cut(s)	1571
MscI	TGGCCA	1 cut(s)	335
MseI	TTAA	2 cut(s)	462, 699
MslI	CAYNNNNRTG	1 cut(s)	723
Msp20I	TGGCCA	1 cut(s)	335
MspCI	CTTAAG	1 cut(s)	461
MspI	CCGG	6 cut(s)	18, 366, 513, 519, 635, 993
MspR9I	CCNGG	7 cut(s)	617, 636, 695, 943, 1254, 1511, 1577
MvaI	CCWGG	6 cut(s)	617, 695, 943, 1254, 1511, 1577
MwoI	GCNNNNNNNGC	4 cut(s)	360, 457, 466, 1020
NaeI	GCCGGC	1 cut(s)	520
NarI	GGCGCC	2 cut(s)	59, 516
NciI	CCSGG	1 cut(s)	636
NdeII	GATC	7 cut(s)	82, 203, 558, 589, 814, 1327, 1628
NgoMIV	GCCGGC	1 cut(s)	518
NlaIII	CATG	3 cut(s)	632, 752, 836
NlaIV	GGNNCC	5 cut(s)	60, 148, 517, 621, 684
NmeAIII	GCCGAG	1 cut(s)	573
NmuCI	GTSAC	3 cut(s)	306, 551, 1707
PceI	AGGCCT	2 cut(s)	1342, 1747
PcsI	WCGNNNNNNNCGW	1 cut(s)	258
PdiI	GCCGGC	1 cut(s)	520
PdmI	GAANNNNTTC	1 cut(s)	1571
PfeI	GAWTC	5 cut(s)	227, 380, 1210, 1233, 1459
PflMI	CCANNNNNTGG	1 cut(s)	749
PfoI	TCCNGGA	1 cut(s)	1252
PkrI	GCNGC	6 cut(s)	76, 139, 157, 330, 982, 1025
PleI	GAGTC	5 cut(s)	380, 558, 1376, 1481, 1798
PluTI	GGCGCC	2 cut(s)	62, 519
PmaCI	CACGTG	1 cut(s)	435
PmlI	CACGTG	1 cut(s)	435
PpsI	GAGTC	5 cut(s)	380, 558, 1376, 1481, 1798
Ppu21I	YACGTR	1 cut(s)	435
PpuMI	RGGWCCY	3 cut(s)	619, 682, 1542
Psp5II	RGGWCCY	3 cut(s)	619, 682, 1542
Psp6I	CCWGG	6 cut(s)	615, 693, 941, 1252, 1509, 1575
PspCI	CACGTG	1 cut(s)	435
PspFI	CCCAGC	1 cut(s)	1695
PspGI	CCWGG	6 cut(s)	615, 693, 941, 1252, 1509, 1575
PspN4I	GGNNCC	5 cut(s)	60, 148, 517, 621, 684
PspPI	GGNCC	5 cut(s)	613, 619, 632, 682, 1542
PspPPI	RGGWCCY	3 cut(s)	619, 682, 1542
PstI	CTGCAG	1 cut(s)	1028
PstNI	CAGNNNCTG	1 cut(s)	328
PsuI	RGATCY	1 cut(s)	1628
RsaI	GTAC	3 cut(s)	1357, 1480, 1616
RsaNI	GTAC	3 cut(s)	1356, 1479, 1615
RseI	CAYNNNNRTG	1 cut(s)	723
SaqAI	TTAA	2 cut(s)	462, 699
SatI	GCNGC	6 cut(s)	75, 138, 156, 329, 981, 1024
Sau3AI	GATC	7 cut(s)	82, 203, 558, 589, 814, 1327, 1628
Sau96I	GGNCC	5 cut(s)	613, 619, 632, 682, 1542
SchI	GAGTC	5 cut(s)	381, 559, 1376, 1481, 1799
ScrFI	CCNGG	7 cut(s)	617, 636, 695, 943, 1254, 1511, 1577
SfaNI	GCATC	4 cut(s)	853, 973, 1120, 1390
SfcI	CTRYAG	1 cut(s)	1024
SfoI	GGCGCC	2 cut(s)	60, 517
SgrAI	CRCCGGYG	1 cut(s)	518
SinI	GGWCC	3 cut(s)	619, 682, 1542
SmiMI	CAYNNNNRTG	1 cut(s)	723
SmlI	CTYRAG	2 cut(s)	461, 1055
SmoI	CTYRAG	2 cut(s)	461, 1055
Sse9I	AATT	8 cut(s)	28, 63, 317, 407, 738, 854, 1195, 1411
SseBI	AGGCCT	2 cut(s)	1342, 1747
SsiI	CCGC	7 cut(s)	36, 207, 352, 522, 545, 927, 980
SspDI	GGCGCC	2 cut(s)	58, 515
SspMI	CTAG	2 cut(s)	758, 1727
StuI	AGGCCT	2 cut(s)	1342, 1747
StyD4I	CCNGG	7 cut(s)	615, 634, 693, 941, 1252, 1509, 1575
StyI	CCWWGG	2 cut(s)	129, 384
TaaI	ACNGT	3 cut(s)	808, 1360, 1735
TaiI	ACGT	1 cut(s)	437
TaqI	TCGA	2 cut(s)	689, 959
TasI	AATT	8 cut(s)	28, 63, 317, 407, 738, 854, 1195, 1411
TatI	WGTACW	1 cut(s)	1614
TauI	GCSGC	1 cut(s)	983
TfiI	GAWTC	5 cut(s)	227, 380, 1210, 1233, 1459
Tru1I	TTAA	2 cut(s)	462, 699
Tru9I	TTAA	2 cut(s)	462, 699
TscAI	CASTG	1 cut(s)	1644
TseFI	GTSAC	3 cut(s)	306, 551, 1707
TseI	GCWGC	5 cut(s)	74, 137, 155, 328, 1023
Tsp45I	GTSAC	3 cut(s)	306, 551, 1707
TspDTI	ATGAA	4 cut(s)	1407, 1458, 1613, 1824
TspGWI	ACGGA	2 cut(s)	270, 875
TspRI	CASTG	1 cut(s)	1644
Van91I	CCANNNNNTGG	1 cut(s)	749
Vha464I	CTTAAG	1 cut(s)	461
VpaK11BI	GGWCC	3 cut(s)	619, 682, 1542
XagI	CCTNNNNNAGG	2 cut(s)	1278, 1752
XapI	RAATTY	2 cut(s)	317, 1411
XbaI	TCTAGA	1 cut(s)	757
XmnI	GAANNNNTTC	1 cut(s)	1571
XspI	CTAG	2 cut(s)	758, 1727

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.