Prupe.1G402600_v2.0.a1

Protein-tyrosine-phosphatase PTP1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
35495100 .. 35496225
1126 bp
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UTR
Exon/CDS
Intron
Prupe.1G402600.1

Sequence Viewer

Length: 1053 bp
ATGCCGAAGACCAAGAGGATGAGGGAGATGTTGAAGACCGAGGTTGATGATGTGACCGCATGGGGAAAATCCCAGAAACTGGAGAACATCTCTTCTAGGGGCTCTCCCCACCGCAGGAGATCGCCGTCAATGGCTACCGCTGCAACAAACGCCCTCCCTTCTTTGGAGTTGTTGGCCTATGATCTGCCTCCAAGGAGACTCACCCTCGCTCCCCATCAGTATAAGTACTGCTCATTGGCTCTCAAATTCTTCAAGGACAAGCTCCGGATGCCTGAACAGATCAAACAAGACTGGGATCACAAAAACCATTATGATGACTACGTAGCGTTGGACGAAAATAGGGTTGTTCTCAACTATTCTGCAGCAGGAGACTACATCAATGCTAGCTTCATCACATCATGTTCCTCTTCTTTTATTGCAACACAAGGTCCACTTTCAGAGACCTTTGAGGATTTTTGGGAGATGGTAATCCAGTACCGTTGCTCTGTAGTTGTCATGCTTACTGACTTGGATGATAATAAATGTGGAGATTATTTTCAGGCAGAAGGTGATGACGGCCATAGAGAATTTGGGAATATATCTATAGCCACTAAGTCGATAAGAAGTAGTGAATTTGGAGATGGTAATTCAGTAGTGTTGCGCCTTTTGGAGGTGAAGAAGCATAACGAAGAGTCAGACTCAGAGGAAGCACCCATGTCTGTTTTGCATATTCAGTATCCGCAATGGCCTGACCATGGAGTTCCCGAAAACACAATTGCTGTTCGTGAAATTTTGAAAAGAGCAATGTATCAAGTAGCACCTGCCATACCCGACTCCGGTCCAATTGTGGTACACTGCAGTGCAGGTGTTGGGAGAACTGGAACATATTGCACAATTCATGACACATTGCAGAGAATTATTTCTGGGGACATGTCTGCTTTAGATTTAGTTAATACAATAACCAGATTTAGGTCTCAGCGAGATGGAATGGTCCAGAAACCGGAGCAATATTGTTTTTGTTATGATGCCATTATTGATGAATTAGAAGACCTCATCTCGGATCCAGTTGAATAG

Protein Analysis

351

Amino Acids

39.63

Weight (kDa)

5.21

Isoelectric Point (pI)

55.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 808, 833
Acc36I ACCTGC 2 cut(s) 808, 833
AccB7I CCANNNNNTGG 1 cut(s) 79
AccIII TCCGGA 1 cut(s) 264
AciI CCGC 4 cut(s) 57, 112, 138, 719
AclWI GGATC 3 cut(s) 303, 1034, 1047
AcoI YGGCCR 1 cut(s) 556
AcsI RAATTY 4 cut(s) 245, 566, 611, 768
AfaI GTAC 3 cut(s) 227, 476, 831
AfiI CCNNNNNNNGG 9 cut(s) 79, 114, 163, 649, 734, 815, 948, 979, 1036
AflIII ACRYGT 1 cut(s) 909
AgsI TTSAA 4 cut(s) 34, 253, 775, 1049
AleI CACNNNNGTG 1 cut(s) 837
AluBI AGCT 2 cut(s) 262, 387
AluI AGCT 2 cut(s) 262, 387
Alw26I GTCTC 4 cut(s) 190, 363, 434, 957
AlwI GGATC 3 cut(s) 303, 1034, 1047
AlwNI CAGNNNCTG 1 cut(s) 79
Aor13HI TCCGGA 1 cut(s) 264
AoxI GGCC 3 cut(s) 174, 556, 725
ApeKI GCWGC 2 cut(s) 140, 362
ApoI RAATTY 4 cut(s) 245, 566, 611, 768
Asp700I GAANNNNTTC 1 cut(s) 898
AspLEI GCGC 1 cut(s) 642
AspS9I GGNCC 3 cut(s) 428, 818, 970
AsuHPI GGTGA 3 cut(s) 193, 560, 664
AsuNHI GCTAGC 1 cut(s) 383
AvaII GGWCC 3 cut(s) 428, 818, 970
BamHI GGATCC 1 cut(s) 1039
BanII GRGCYC 1 cut(s) 104
BbsI GAAGAC 3 cut(s) 14, 41, 1032
BbvI GCAGC 2 cut(s) 127, 374
BccI CCATC 4 cut(s) 222, 457, 614, 956
BceAI ACGGC 2 cut(s) 109, 571
BciVI GTATCC 1 cut(s) 726
BcoDI GTCTC 4 cut(s) 190, 363, 434, 957
BfaI CTAG 2 cut(s) 96, 384
BfmI CTRYAG 4 cut(s) 360, 486, 582, 835
BfuAI ACCTGC 2 cut(s) 808, 833
BfuI GTATCC 1 cut(s) 726
BisI GCNGC 2 cut(s) 141, 363
BlsI GCNGC 2 cut(s) 142, 364
BmcAI AGTACT 1 cut(s) 227
Bme18I GGWCC 3 cut(s) 428, 818, 970
BmgT120I GGNCC 3 cut(s) 428, 818, 970
BmiI GGNNCC 1 cut(s) 1041
BmrI ACTGGG 1 cut(s) 301
BmsI GCATC 2 cut(s) 258, 994
BmtI GCTAGC 1 cut(s) 387
BmuI ACTGGG 1 cut(s) 301
BoxI GACNNNNGTC 1 cut(s) 816
BpiI GAAGAC 3 cut(s) 14, 41, 1032
BplI GAGNNNNNCTC 4 cut(s) 74, 106, 662, 694
BpmI CTGGAG 1 cut(s) 101
BsaAI YACGTR 1 cut(s) 322
BsaBI GATNNNNATC 1 cut(s) 467
BsaI GGTCTC 2 cut(s) 434, 957
BsaJI CCNNGG 3 cut(s) 39, 191, 733
BsaWI WCCGGW 3 cut(s) 264, 815, 979
BsaXI ACNNNNNCTCC 2 cut(s) 193, 223
Bsc4I CCNNNNNNNGG 9 cut(s) 79, 114, 163, 649, 734, 815, 948, 979, 1036
Bse1I ACTGG 5 cut(s) 84, 296, 472, 862, 1043
Bse3DI GCAATG 3 cut(s) 728, 789, 884
Bse8I GATNNNNATC 1 cut(s) 467
BseAI TCCGGA 1 cut(s) 264
BseDI CCNNGG 3 cut(s) 39, 191, 733
BseGI GGATG 3 cut(s) 24, 273, 517
BseJI GATNNNNATC 1 cut(s) 467
BseLI CCNNNNNNNGG 9 cut(s) 79, 114, 163, 649, 734, 815, 948, 979, 1036
BseMI GCAATG 3 cut(s) 728, 789, 884
BseMII CTCAG 2 cut(s) 693, 968
BseNI ACTGG 5 cut(s) 84, 296, 472, 862, 1043
BseXI GCAGC 2 cut(s) 127, 374
BsgI GTGCAG 1 cut(s) 861
BshFI GGCC 3 cut(s) 176, 558, 727
BsiSI CCGG 3 cut(s) 265, 816, 980
BslFI GGGAC 1 cut(s) 920
BslI CCNNNNNNNGG 9 cut(s) 79, 114, 163, 649, 734, 815, 948, 979, 1036
BsmAI GTCTC 4 cut(s) 190, 363, 434, 957
BsmFI GGGAC 1 cut(s) 920
BsnI GGCC 3 cut(s) 176, 558, 727
Bso31I GGTCTC 2 cut(s) 434, 957
Bsp1286I GDGCHC 1 cut(s) 104
Bsp13I TCCGGA 1 cut(s) 264
Bsp143I GATC 5 cut(s) 119, 181, 279, 295, 1039
Bsp19I CCATGG 1 cut(s) 733
BspACI CCGC 4 cut(s) 57, 112, 138, 719
BspANI GGCC 3 cut(s) 176, 558, 727
BspCNI CTCAG 2 cut(s) 692, 967
BspEI TCCGGA 1 cut(s) 264
BspHI TCATGA 1 cut(s) 877
BspLI GGNNCC 1 cut(s) 1041
BspMAI CTGCAG 2 cut(s) 364, 839
BspMI ACCTGC 2 cut(s) 808, 833
BspOI GCTAGC 1 cut(s) 387
BspPI GGATC 3 cut(s) 303, 1034, 1047
BspTNI GGTCTC 2 cut(s) 434, 957
BsrDI GCAATG 3 cut(s) 728, 789, 884
BsrI ACTGG 5 cut(s) 84, 296, 472, 862, 1043
BssECI CCNNGG 3 cut(s) 39, 191, 733
BssMI GATC 5 cut(s) 119, 181, 279, 295, 1039
BssT1I CCWWGG 2 cut(s) 191, 733
Bst4CI ACNGT 1 cut(s) 479
Bst6I CTCTTC 3 cut(s) 97, 412, 663
BstBAI YACGTR 1 cut(s) 322
BstC8I GCNNGC 1 cut(s) 385
BstDEI CTNAG 3 cut(s) 591, 679, 954
BstDSI CCRYGG 1 cut(s) 733
BstENI CCTNNNNNAGG 1 cut(s) 647
BstF5I GGATG 3 cut(s) 24, 273, 517
BstHHI GCGC 1 cut(s) 642
BstKTI GATC 5 cut(s) 122, 184, 282, 298, 1042
BstMAI GTCTC 4 cut(s) 190, 363, 434, 957
BstMBI GATC 5 cut(s) 119, 181, 279, 295, 1039
BstMWI GCNNNNNNNGC 3 cut(s) 140, 149, 268
BstNSI RCATGY 1 cut(s) 913
BstPAI GACNNNNGTC 1 cut(s) 816
BstSFI CTRYAG 4 cut(s) 360, 486, 582, 835
BstSNI TACGTA 1 cut(s) 322
BstV1I GCAGC 2 cut(s) 127, 374
BstV2I GAAGAC 3 cut(s) 14, 41, 1032
BstX2I RGATCY 1 cut(s) 1039
BstYI RGATCY 1 cut(s) 1039
BsuI GTATCC 1 cut(s) 726
BsuRI GGCC 3 cut(s) 176, 558, 727
BtgI CCRYGG 1 cut(s) 733
BtsCI GGATG 3 cut(s) 24, 273, 517
BtsI GCAGTG 2 cut(s) 832, 844
BtsIMutI CAGTG 2 cut(s) 832, 844
BveI ACCTGC 2 cut(s) 808, 833
Cac8I GCNNGC 1 cut(s) 385
CaiI CAGNNNCTG 1 cut(s) 79
CciI TCATGA 1 cut(s) 877
CfoI GCGC 1 cut(s) 642
Cfr13I GGNCC 3 cut(s) 428, 818, 970
Csp6I GTAC 3 cut(s) 226, 475, 830
CviAII CATG 7 cut(s) 60, 399, 496, 694, 734, 878, 910
CviJI RGCY 9 cut(s) 102, 134, 176, 239, 262, 387, 558, 587, 727
CviKI_1 RGCY 9 cut(s) 102, 134, 176, 239, 262, 387, 558, 587, 727
CviQI GTAC 3 cut(s) 226, 475, 830
DdeI CTNAG 3 cut(s) 591, 679, 954
DpnI GATC 5 cut(s) 121, 183, 281, 297, 1041
DpnII GATC 5 cut(s) 119, 181, 279, 295, 1039
EaeI YGGCCR 1 cut(s) 556
Eam1104I CTCTTC 3 cut(s) 97, 412, 663
EarI CTCTTC 3 cut(s) 97, 412, 663
Eco105I TACGTA 1 cut(s) 322
Eco130I CCWWGG 2 cut(s) 191, 733
Eco24I GRGCYC 1 cut(s) 104
Eco31I GGTCTC 2 cut(s) 434, 957
Eco47I GGWCC 3 cut(s) 428, 818, 970
EcoNI CCTNNNNNAGG 1 cut(s) 647
EcoT14I CCWWGG 2 cut(s) 191, 733
EcoT38I GRGCYC 1 cut(s) 104
ErhI CCWWGG 2 cut(s) 191, 733
FaeI CATG 7 cut(s) 63, 402, 499, 697, 737, 881, 913
FalI AAGNNNNNCTT 2 cut(s) 417, 449
FaqI GGGAC 1 cut(s) 920
FatI CATG 7 cut(s) 59, 398, 495, 693, 733, 877, 909
Fnu4HI GCNGC 2 cut(s) 141, 363
FokI GGATG 3 cut(s) 31, 280, 524
FriOI GRGCYC 1 cut(s) 104
Fsp4HI GCNGC 2 cut(s) 141, 363
FspBI CTAG 2 cut(s) 96, 384
GlaI GCGC 1 cut(s) 641
GluI GCNGC 2 cut(s) 141, 363
GsuI CTGGAG 1 cut(s) 101
HaeIII GGCC 3 cut(s) 176, 558, 727
HapII CCGG 3 cut(s) 265, 816, 980
HhaI GCGC 1 cut(s) 642
Hin1II CATG 7 cut(s) 63, 402, 499, 697, 737, 881, 913
Hin6I GCGC 1 cut(s) 640
HinP1I GCGC 1 cut(s) 640
HinfI GANTC 4 cut(s) 198, 671, 677, 812
HpaII CCGG 3 cut(s) 265, 816, 980
HphI GGTGA 3 cut(s) 193, 560, 664
Hpy166II GTNNAC 2 cut(s) 431, 832
Hpy188I TCNGA 4 cut(s) 439, 676, 682, 1039
Hpy188III TCNNGA 5 cut(s) 265, 743, 764, 878, 973
Hpy8I GTNNAC 2 cut(s) 431, 832
HpyAV CCTTC 2 cut(s) 168, 539
HpyCH4III ACNGT 1 cut(s) 479
HpyCH4IV ACGT 1 cut(s) 321
HpyCH4V TGCA 8 cut(s) 143, 362, 419, 706, 837, 842, 870, 889
HpyF10VI GCNNNNNNNGC 3 cut(s) 140, 149, 268
HpyF3I CTNAG 3 cut(s) 591, 679, 954
HpySE526I ACGT 1 cut(s) 321
Hsp92II CATG 7 cut(s) 63, 402, 499, 697, 737, 881, 913
HspAI GCGC 1 cut(s) 640
Kpn2I TCCGGA 1 cut(s) 264
Kzo9I GATC 5 cut(s) 119, 181, 279, 295, 1039
LmnI GCTCC 3 cut(s) 214, 267, 982
Lsp1109I GCAGC 2 cut(s) 127, 374
LweI GCATC 2 cut(s) 258, 994
MaeI CTAG 2 cut(s) 96, 384
MaeII ACGT 1 cut(s) 321
MaeIII GTNAC 1 cut(s) 52
MalI GATC 5 cut(s) 121, 183, 281, 297, 1041
MboI GATC 5 cut(s) 119, 181, 279, 295, 1039
MboII GAAGA 8 cut(s) 19, 46, 84, 241, 399, 667, 680, 1037
MfeI CAATTG 2 cut(s) 753, 822
MflI RGATCY 1 cut(s) 1039
MhlI GDGCHC 1 cut(s) 104
MlyI GAGTC 4 cut(s) 192, 671, 680, 806
MmeI TCCRAC 1 cut(s) 309
MroI TCCGGA 1 cut(s) 264
MroXI GAANNNNTTC 1 cut(s) 898
MseI TTAA 1 cut(s) 930
MslI CAYNNNNRTG 2 cut(s) 312, 837
MspA1I CMGCKG 1 cut(s) 140
MspI CCGG 3 cut(s) 265, 816, 980
MunI CAATTG 2 cut(s) 753, 822
MwoI GCNNNNNNNGC 3 cut(s) 140, 149, 268
NcoI CCATGG 1 cut(s) 733
NdeII GATC 5 cut(s) 119, 181, 279, 295, 1039
NheI GCTAGC 1 cut(s) 383
NlaIII CATG 7 cut(s) 63, 402, 499, 697, 737, 881, 913
NlaIV GGNNCC 1 cut(s) 1041
NmuCI GTSAC 1 cut(s) 52
NspI RCATGY 1 cut(s) 913
OliI CACNNNNGTG 1 cut(s) 837
PagI TCATGA 1 cut(s) 877
PaqCI CACCTGC 2 cut(s) 808, 833
PciI ACATGT 1 cut(s) 909
PdmI GAANNNNTTC 1 cut(s) 898
PflMI CCANNNNNTGG 1 cut(s) 79
PkrI GCNGC 2 cut(s) 142, 364
PleI GAGTC 4 cut(s) 192, 671, 679, 806
PpsI GAGTC 4 cut(s) 192, 671, 679, 806
Ppu21I YACGTR 1 cut(s) 322
PscI ACATGT 1 cut(s) 909
PshAI GACNNNNGTC 1 cut(s) 816
PspN4I GGNNCC 1 cut(s) 1041
PspPI GGNCC 3 cut(s) 428, 818, 970
PstI CTGCAG 2 cut(s) 364, 839
PstNI CAGNNNCTG 1 cut(s) 79
PsuI RGATCY 1 cut(s) 1039
RsaI GTAC 3 cut(s) 227, 476, 831
RsaNI GTAC 3 cut(s) 226, 475, 830
RseI CAYNNNNRTG 2 cut(s) 312, 837
SaqAI TTAA 1 cut(s) 930
SatI GCNGC 2 cut(s) 141, 363
Sau3AI GATC 5 cut(s) 119, 181, 279, 295, 1039
Sau96I GGNCC 3 cut(s) 428, 818, 970
ScaI AGTACT 1 cut(s) 227
SchI GAGTC 4 cut(s) 192, 671, 680, 806
SduI GDGCHC 1 cut(s) 104
SfaNI GCATC 2 cut(s) 258, 994
SfcI CTRYAG 4 cut(s) 360, 486, 582, 835
SinI GGWCC 3 cut(s) 428, 818, 970
SmiMI CAYNNNNRTG 2 cut(s) 312, 837
SnaBI TACGTA 1 cut(s) 322
SsiI CCGC 4 cut(s) 57, 112, 138, 719
SspI AATATT 1 cut(s) 989
SspMI CTAG 2 cut(s) 96, 384
StyI CCWWGG 2 cut(s) 191, 733
TaaI ACNGT 1 cut(s) 479
TaiI ACGT 1 cut(s) 324
TaqI TCGA 1 cut(s) 596
TaqII GACCGA 1 cut(s) 53
TatI WGTACW 1 cut(s) 225
Tru1I TTAA 1 cut(s) 930
Tru9I TTAA 1 cut(s) 930
TscAI CASTG 2 cut(s) 839, 844
TseFI GTSAC 1 cut(s) 52
TseI GCWGC 2 cut(s) 140, 362
Tsp45I GTSAC 1 cut(s) 52
TspDTI ATGAA 3 cut(s) 379, 866, 1032
TspRI CASTG 2 cut(s) 839, 844
Van91I CCANNNNNTGG 1 cut(s) 79
VpaK11BI GGWCC 3 cut(s) 428, 818, 970
XagI CCTNNNNNAGG 1 cut(s) 647
XapI RAATTY 4 cut(s) 245, 566, 611, 768
XceI RCATGY 1 cut(s) 913
XcmI CCANNNNNNNNNTGG 1 cut(s) 566
XmnI GAANNNNTTC 1 cut(s) 898
XspI CTAG 2 cut(s) 96, 384
ZrmI AGTACT 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.