Rh6BG188100

Protein-tyrosine-phosphatase PTP1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
34873440 .. 34877582
4143 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG188100.1

Sequence Viewer

Length: 1059 bp
ATGGCCTCTTCTGCCGCAGAAAAACCTGTCCCTTCCTTTGAGTTCTCGGCCGATTCTCCGCCGGCGAGACTCAAACTCAGCCCCGATCAGTATAACTACTGCTCCCAGGCTCTCAAATTCTTCAAGGACAAACTCCAGATGCGTCACCAGATCAACCAAGAGTTCGCTCTCTTACAGGGCAAGAGGATCACAGCATCTGAGATGAAGAGAAGTTGCACTGTGGCTCTGGACCCTGTCAATGTCACCAAAAATCGCTACACCGATGTCTTACCATTTGATCAAAATAGGGTCGTTCTCAAGTCTTGTAAAGATTACAGACCTGAAGCAAGGGGCTACATCAATGCCAGCTACATCTCGGCTTGTTCCTCTGAAAGCATTTCTAGGTTTATAGCAACACAAGGTCCACTTCCGCATACCTATGAGGATTTCTGGGAGATGGTACTTGAGAATCATTGCCCTGTAGTGGTCATGCTTACTCGCTTAGTCGACTATTACAAGATGGTCAAGTGTGGAGATTATTTTCAGGCAGAAGATGGTCCTAGAGAATTCGGTAATATAACTATAGCCACCAAGTGGACAAGAACCACTTGCACTTCATTAGTATTGCGCCTTCTGGAGGTCAGCAGTAAGGAGTTAGAGGAACCACCAATGACTGTGCTGCATATTCAGTATCCTGAATGGCCTGACCATGGAGTTCCCACGGATACAATTGCTGTTCGTGAAATATTGAAGTCAATATATCAAGTTCCACCCAACCTTGGCCCAGTAGTGGTGCACTGCAGTGCAGGTATTGGGAGGACTGGAACATACTGCACAATTCATAATACAATTCAGAGAATTCTTTCTGGGGACATGTCTGCTTTAGATCTTGCTAATACAATAACCACATTTAGGACTGAGCGTATTGGAATGGTGCAGACACTGGTATCTTCTTCCCTGTTTGCCATATTGCTGTTTAATTCTTCCCTTTTAGGGTTGTTTTTTTTTTTCCTCCTCTTCTCCAATAAGACTTCTCTTTTATGCTTCAAACTGGATTATTGTAGAAATACGCGATTTTAA

Protein Analysis

352

Amino Acids

39.92

Weight (kDa)

8.23

Isoelectric Point (pI)

43.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Y_phosphatase PF00102 80 - 308 1.2e-65 Protein-tyrosine phosphatase
Tc-R-P PF22785 212 - 270 2.3e-06 Polymorphic toxin system, DSP-PTPase phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 776
AccB7I CCANNNNNTGG 1 cut(s) 573
AccI GTMKAC 1 cut(s) 486
AccII CGCG 1 cut(s) 1051
AciI CCGC 3 cut(s) 15, 59, 410
AclWI GGATC 1 cut(s) 194
AcoI YGGCCR 1 cut(s) 48
AcsI RAATTY 3 cut(s) 116, 545, 837
AcuI CTGAAG 1 cut(s) 342
AdeI CACNNNGTG 1 cut(s) 573
AfaI GTAC 1 cut(s) 441
AfiI CCNNNNNNNGG 8 cut(s) 463, 573, 616, 689, 758, 769, 891, 972
AflIII ACRYGT 1 cut(s) 852
AgsI TTSAA 3 cut(s) 124, 730, 1027
AjnI CCWGG 1 cut(s) 105
AleI CACNNNNGTG 1 cut(s) 780
AluBI AGCT 1 cut(s) 348
AluI AGCT 1 cut(s) 348
Alw21I GWGCWC 1 cut(s) 777
Alw26I GTCTC 1 cut(s) 61
Alw44I GTGCAC 1 cut(s) 773
AlwI GGATC 1 cut(s) 194
AlwNI CAGNNNCTG 2 cut(s) 197, 922
AoxI GGCC 4 cut(s) 3, 48, 680, 760
ApaLI GTGCAC 1 cut(s) 773
ApeKI GCWGC 1 cut(s) 658
ApoI RAATTY 3 cut(s) 116, 545, 837
Asp700I GAANNNNTTC 1 cut(s) 841
AspLEI GCGC 1 cut(s) 609
AspS9I GGNCC 4 cut(s) 229, 401, 536, 761
AsuHPI GGTGA 2 cut(s) 137, 235
AvaII GGWCC 3 cut(s) 229, 401, 536
BaeGI GKGCMC 1 cut(s) 777
BaeI ACNNNNGTAYC 2 cut(s) 909, 942
BarI GAAGNNNNNNTAC 2 cut(s) 594, 626
Bbv12I GWGCWC 1 cut(s) 777
BbvI GCAGC 1 cut(s) 645
BccI CCATC 3 cut(s) 430, 493, 527
BciT130I CCWGG 1 cut(s) 107
BciVI GTATCC 2 cut(s) 681, 697
BclI TGATCA 1 cut(s) 277
BcoDI GTCTC 1 cut(s) 61
BfaI CTAG 2 cut(s) 381, 540
BfmI CTRYAG 3 cut(s) 459, 561, 778
BfuAI ACCTGC 1 cut(s) 776
BfuI GTATCC 2 cut(s) 681, 697
BglII AGATCT 1 cut(s) 865
BisI GCNGC 2 cut(s) 15, 659
BlsI GCNGC 2 cut(s) 16, 660
Bme1390I CCNGG 1 cut(s) 107
Bme18I GGWCC 3 cut(s) 229, 401, 536
BmgT120I GGNCC 4 cut(s) 229, 401, 536, 761
BmiI GGNNCC 2 cut(s) 231, 642
BmrFI CCNGG 1 cut(s) 107
BmrI ACTGGG 1 cut(s) 758
BmsI GCATC 2 cut(s) 129, 203
BmuI ACTGGG 1 cut(s) 758
BpmI CTGGAG 2 cut(s) 119, 635
BpuEI CTTGAG 2 cut(s) 281, 464
BsaJI CCNNGG 4 cut(s) 105, 688, 699, 757
BsaXI ACNNNNNCTCC 2 cut(s) 86, 116
Bsc4I CCNNNNNNNGG 8 cut(s) 463, 573, 616, 689, 758, 769, 891, 972
Bse118I RCCGGY 1 cut(s) 61
Bse1I ACTGG 4 cut(s) 764, 805, 927, 1035
Bse3DI GCAATG 1 cut(s) 451
BseBI CCWGG 1 cut(s) 107
BseDI CCNNGG 4 cut(s) 105, 688, 699, 757
BseLI CCNNNNNNNGG 8 cut(s) 463, 573, 616, 689, 758, 769, 891, 972
BseMI GCAATG 1 cut(s) 451
BseMII CTCAG 3 cut(s) 91, 189, 888
BseNI ACTGG 4 cut(s) 764, 805, 927, 1035
BseRI GAGGAG 1 cut(s) 983
BseSI GKGCMC 1 cut(s) 777
BseX3I CGGCCG 1 cut(s) 48
BseXI GCAGC 1 cut(s) 645
BsgI GTGCAG 3 cut(s) 796, 804, 935
Bsh1236I CGCG 1 cut(s) 1051
Bsh1285I CGRYCG 1 cut(s) 51
BshFI GGCC 4 cut(s) 5, 50, 682, 762
BsiEI CGRYCG 1 cut(s) 51
BsiHKAI GWGCWC 1 cut(s) 777
BsiSI CCGG 1 cut(s) 62
BslFI GGGAC 2 cut(s) 14, 863
BslI CCNNNNNNNGG 8 cut(s) 463, 573, 616, 689, 758, 769, 891, 972
BsmAI GTCTC 1 cut(s) 61
BsmFI GGGAC 2 cut(s) 14, 863
BsnI GGCC 4 cut(s) 5, 50, 682, 762
Bsp1286I GDGCHC 1 cut(s) 777
Bsp143I GATC 5 cut(s) 85, 150, 186, 277, 865
Bsp19I CCATGG 1 cut(s) 688
BspACI CCGC 3 cut(s) 15, 59, 410
BspANI GGCC 4 cut(s) 5, 50, 682, 762
BspCNI CTCAG 3 cut(s) 90, 190, 889
BspFNI CGCG 1 cut(s) 1051
BspLI GGNNCC 2 cut(s) 231, 642
BspMAI CTGCAG 1 cut(s) 782
BspMI ACCTGC 1 cut(s) 776
BspPI GGATC 1 cut(s) 194
BsrDI GCAATG 1 cut(s) 451
BsrFI RCCGGY 1 cut(s) 61
BsrI ACTGG 4 cut(s) 764, 805, 927, 1035
BssAI RCCGGY 1 cut(s) 61
BssECI CCNNGG 4 cut(s) 105, 688, 699, 757
BssMI GATC 5 cut(s) 85, 150, 186, 277, 865
BssT1I CCWWGG 2 cut(s) 688, 757
Bst2UI CCWGG 1 cut(s) 107
Bst4CI ACNGT 2 cut(s) 220, 655
Bst6I CTCTTC 3 cut(s) 13, 200, 1001
BstC8I GCNNGC 2 cut(s) 63, 346
BstDEI CTNAG 4 cut(s) 77, 198, 481, 897
BstDSI CCRYGG 2 cut(s) 688, 699
BstENI CCTNNNNNAGG 1 cut(s) 614
BstFNI CGCG 1 cut(s) 1051
BstHHI GCGC 1 cut(s) 609
BstKTI GATC 5 cut(s) 88, 153, 189, 280, 868
BstMAI GTCTC 1 cut(s) 61
BstMBI GATC 5 cut(s) 85, 150, 186, 277, 865
BstMCI CGRYCG 1 cut(s) 51
BstMWI GCNNNNNNNGC 1 cut(s) 11
BstNI CCWGG 1 cut(s) 107
BstNSI RCATGY 1 cut(s) 856
BstSCI CCNGG 1 cut(s) 105
BstSFI CTRYAG 3 cut(s) 459, 561, 778
BstSLI GKGCMC 1 cut(s) 777
BstUI CGCG 1 cut(s) 1051
BstV1I GCAGC 1 cut(s) 645
BstX2I RGATCY 1 cut(s) 865
BstYI RGATCY 1 cut(s) 865
BstZI CGGCCG 1 cut(s) 48
BsuI GTATCC 2 cut(s) 681, 697
BsuRI GGCC 4 cut(s) 5, 50, 682, 762
BtgI CCRYGG 2 cut(s) 688, 699
BtsI GCAGTG 2 cut(s) 775, 787
BtsIMutI CAGTG 4 cut(s) 216, 775, 787, 920
BveI ACCTGC 1 cut(s) 776
Cac8I GCNNGC 2 cut(s) 63, 346
CaiI CAGNNNCTG 2 cut(s) 197, 922
CfoI GCGC 1 cut(s) 609
Cfr10I RCCGGY 1 cut(s) 61
Cfr13I GGNCC 4 cut(s) 229, 401, 536, 761
CseI GACGC 1 cut(s) 131
Csp6I GTAC 1 cut(s) 440
CviAII CATG 3 cut(s) 469, 689, 853
CviQI GTAC 1 cut(s) 440
DdeI CTNAG 4 cut(s) 77, 198, 481, 897
DpnI GATC 5 cut(s) 87, 152, 188, 279, 867
DpnII GATC 5 cut(s) 85, 150, 186, 277, 865
DraIII CACNNNGTG 1 cut(s) 573
EaeI YGGCCR 1 cut(s) 48
EagI CGGCCG 1 cut(s) 48
Eam1104I CTCTTC 3 cut(s) 13, 200, 1001
EarI CTCTTC 3 cut(s) 13, 200, 1001
EciI GGCGGA 1 cut(s) 48
EclXI CGGCCG 1 cut(s) 48
Eco130I CCWWGG 2 cut(s) 688, 757
Eco47I GGWCC 3 cut(s) 229, 401, 536
Eco52I CGGCCG 1 cut(s) 48
Eco57I CTGAAG 1 cut(s) 342
EcoNI CCTNNNNNAGG 1 cut(s) 614
EcoRI GAATTC 2 cut(s) 545, 837
EcoRII CCWGG 1 cut(s) 105
EcoT14I CCWWGG 2 cut(s) 688, 757
ErhI CCWWGG 2 cut(s) 688, 757
FaeI CATG 3 cut(s) 472, 692, 856
FalI AAGNNNNNCTT 4 cut(s) 390, 422, 571, 603
FaqI GGGAC 2 cut(s) 14, 863
FatI CATG 3 cut(s) 468, 688, 852
FbaI TGATCA 1 cut(s) 277
FblI GTMKAC 1 cut(s) 486
Fnu4HI GCNGC 2 cut(s) 15, 659
Fsp4HI GCNGC 2 cut(s) 15, 659
FspBI CTAG 2 cut(s) 381, 540
GlaI GCGC 1 cut(s) 608
GluI GCNGC 2 cut(s) 15, 659
GsuI CTGGAG 2 cut(s) 119, 635
HaeIII GGCC 4 cut(s) 5, 50, 682, 762
HapII CCGG 1 cut(s) 62
HgaI GACGC 1 cut(s) 131
HhaI GCGC 1 cut(s) 609
Hin1II CATG 3 cut(s) 472, 692, 856
Hin6I GCGC 1 cut(s) 607
HinP1I GCGC 1 cut(s) 607
HincII GTYRAC 1 cut(s) 487
HindII GTYRAC 1 cut(s) 487
HinfI GANTC 3 cut(s) 53, 69, 448
HpaII CCGG 1 cut(s) 62
HphI GGTGA 2 cut(s) 137, 235
Hpy166II GTNNAC 4 cut(s) 404, 487, 576, 775
Hpy188I TCNGA 3 cut(s) 199, 370, 834
Hpy188III TCNNGA 5 cut(s) 136, 227, 614, 674, 719
Hpy8I GTNNAC 4 cut(s) 404, 487, 576, 775
HpyAV CCTTC 2 cut(s) 42, 620
HpyCH4III ACNGT 2 cut(s) 220, 655
HpyCH4V TGCA 8 cut(s) 216, 591, 661, 775, 780, 785, 813, 916
HpyF10VI GCNNNNNNNGC 1 cut(s) 11
HpyF3I CTNAG 4 cut(s) 77, 198, 481, 897
Hsp92II CATG 3 cut(s) 472, 692, 856
HspAI GCGC 1 cut(s) 607
KroI GCCGGC 1 cut(s) 61
KroNI GCCGGC 1 cut(s) 63
Ksp22I TGATCA 1 cut(s) 277
Kzo9I GATC 5 cut(s) 85, 150, 186, 277, 865
LmnI GCTCC 1 cut(s) 107
Lsp1109I GCAGC 1 cut(s) 645
LweI GCATC 2 cut(s) 129, 203
MaeI CTAG 2 cut(s) 381, 540
MaeIII GTNAC 2 cut(s) 143, 241
MalI GATC 5 cut(s) 87, 152, 188, 279, 867
MboI GATC 5 cut(s) 85, 150, 186, 277, 865
MboII GAAGA 7 cut(s) 112, 217, 542, 921, 924, 954, 988
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 1 cut(s) 865
MhlI GDGCHC 1 cut(s) 777
MluCI AATT 7 cut(s) 116, 545, 708, 816, 828, 837, 958
MlyI GAGTC 1 cut(s) 63
MnlI CCTC 9 cut(s) 16, 177, 376, 415, 610, 631, 789, 1001, 1004
MreI CGCCGGCG 1 cut(s) 61
MroNI GCCGGC 1 cut(s) 61
MroXI GAANNNNTTC 1 cut(s) 841
MseI TTAA 2 cut(s) 957, 1057
MslI CAYNNNNRTG 2 cut(s) 417, 780
MspI CCGG 1 cut(s) 62
MspR9I CCNGG 1 cut(s) 107
MunI CAATTG 1 cut(s) 708
MvaI CCWGG 1 cut(s) 107
MvnI CGCG 1 cut(s) 1051
MwoI GCNNNNNNNGC 1 cut(s) 11
NaeI GCCGGC 1 cut(s) 63
NcoI CCATGG 1 cut(s) 688
NdeII GATC 5 cut(s) 85, 150, 186, 277, 865
NgoMIV GCCGGC 1 cut(s) 61
NlaIII CATG 3 cut(s) 472, 692, 856
NlaIV GGNNCC 2 cut(s) 231, 642
NmeAIII GCCGAG 2 cut(s) 26, 335
NmuCI GTSAC 2 cut(s) 143, 241
NspI RCATGY 1 cut(s) 856
OliI CACNNNNGTG 1 cut(s) 780
PciI ACATGT 1 cut(s) 852
PdiI GCCGGC 1 cut(s) 63
PdmI GAANNNNTTC 1 cut(s) 841
PfeI GAWTC 2 cut(s) 53, 448
PflFI GACNNNGTC 1 cut(s) 233
PflMI CCANNNNNTGG 1 cut(s) 573
PkrI GCNGC 2 cut(s) 16, 660
PleI GAGTC 1 cut(s) 63
PpsI GAGTC 1 cut(s) 63
PscI ACATGT 1 cut(s) 852
Psp6I CCWGG 1 cut(s) 105
PspGI CCWGG 1 cut(s) 105
PspN4I GGNNCC 2 cut(s) 231, 642
PspPI GGNCC 4 cut(s) 229, 401, 536, 761
PstI CTGCAG 1 cut(s) 782
PstNI CAGNNNCTG 2 cut(s) 197, 922
PsuI RGATCY 1 cut(s) 865
PsyI GACNNNGTC 1 cut(s) 233
RsaI GTAC 1 cut(s) 441
RsaNI GTAC 1 cut(s) 440
RseI CAYNNNNRTG 2 cut(s) 417, 780
SalI GTCGAC 1 cut(s) 485
SaqAI TTAA 2 cut(s) 957, 1057
SatI GCNGC 2 cut(s) 15, 659
Sau3AI GATC 5 cut(s) 85, 150, 186, 277, 865
Sau96I GGNCC 4 cut(s) 229, 401, 536, 761
SchI GAGTC 1 cut(s) 63
ScrFI CCNGG 1 cut(s) 107
SduI GDGCHC 1 cut(s) 777
SetI ASST 9 cut(s) 28, 322, 350, 386, 403, 419, 621, 759, 790
SfaNI GCATC 2 cut(s) 129, 203
SfcI CTRYAG 3 cut(s) 459, 561, 778
SgrAI CRCCGGYG 1 cut(s) 61
SinI GGWCC 3 cut(s) 229, 401, 536
SmiMI CAYNNNNRTG 2 cut(s) 417, 780
SmlI CTYRAG 2 cut(s) 296, 443
SmoI CTYRAG 2 cut(s) 296, 443
Sse9I AATT 7 cut(s) 116, 545, 708, 816, 828, 837, 958
SsiI CCGC 3 cut(s) 15, 59, 410
SspI AATATT 1 cut(s) 726
SspMI CTAG 2 cut(s) 381, 540
StyD4I CCNGG 1 cut(s) 105
StyI CCWWGG 2 cut(s) 688, 757
TaaI ACNGT 2 cut(s) 220, 655
TaqI TCGA 1 cut(s) 486
TasI AATT 7 cut(s) 116, 545, 708, 816, 828, 837, 958
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 2 cut(s) 53, 448
Tru1I TTAA 2 cut(s) 957, 1057
Tru9I TTAA 2 cut(s) 957, 1057
TscAI CASTG 4 cut(s) 223, 782, 787, 927
TseFI GTSAC 2 cut(s) 143, 241
TseI GCWGC 1 cut(s) 658
Tsp45I GTSAC 2 cut(s) 143, 241
TspDTI ATGAA 3 cut(s) 218, 585, 809
TspGWI ACGGA 1 cut(s) 716
TspRI CASTG 4 cut(s) 223, 782, 787, 927
Tth111I GACNNNGTC 1 cut(s) 233
Van91I CCANNNNNTGG 1 cut(s) 573
VneI GTGCAC 1 cut(s) 773
VpaK11BI GGWCC 3 cut(s) 229, 401, 536
XagI CCTNNNNNAGG 1 cut(s) 614
XapI RAATTY 3 cut(s) 116, 545, 837
XceI RCATGY 1 cut(s) 856
XmiI GTMKAC 1 cut(s) 486
XmnI GAANNNNTTC 1 cut(s) 841
XspI CTAG 2 cut(s) 381, 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.