transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66380 |
| fragaria_vesca | FvH4_2g31020 FvH4_2g31020 FvH4_5g19400 FvH4_5g19400 FvH4_5g19400 |
| malus_domestica | MD04G1060200.v1.1 MD06G1053100.v1.1 MD15G1050300.v1.1 |
| prunus_persica | Prupe.1G404700_v2.0.a1 Prupe.1G404800_v2.0.a1 Prupe.5G065500_v2.0.a1 |
| pyrus_communis | pycom04g05380 pycom06g04480 pycom15g04870 |
| rosa_chinensis | RchiOBHm_Chr6g0311771 RchiOBHm_Chr7g0203911 |
| rosa_laevigata | RLG00000003500 RLG00000010375 |
| rosa_multiflora | Rmu_sc0002888.1_g000040 Rmu_sc0014006.1_g000003 Rmu_sc0015961.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00253470 Rroxscaffold_7G00157320 |
| rosa_rugosa | Rorug07G0079200.1 Rorug07G0079300 |
| rosa_samantha | Rh6AG506900 Rh6BG517700 Rh6CG523300 Rh6DG509200 Rh7AG209200 Rh7CG221600 Rh7DG216200 |
| rosa_wichuraiana | Rw6G044100 Rw7G018230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 125, 153 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 76, 427 |
| AcsI | RAATTY | 1 cut(s) | 563 |
| AfaI | GTAC | 1 cut(s) | 25 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 76, 427, 574 |
| AgsI | TTSAA | 5 cut(s) | 92, 487, 499, 544, 572 |
| AjnI | CCWGG | 1 cut(s) | 292 |
| AluBI | AGCT | 1 cut(s) | 483 |
| AluI | AGCT | 1 cut(s) | 483 |
| Alw26I | GTCTC | 2 cut(s) | 181, 385 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 76 |
| AoxI | GGCC | 1 cut(s) | 536 |
| ApoI | RAATTY | 1 cut(s) | 563 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 563 |
| AspA2I | CCTAGG | 1 cut(s) | 256 |
| AspS9I | GGNCC | 2 cut(s) | 101, 536 |
| AvaII | GGWCC | 1 cut(s) | 101 |
| AvrII | CCTAGG | 1 cut(s) | 256 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 219, 251 |
| BbsI | GAAGAC | 3 cut(s) | 72, 234, 292 |
| BccI | CCATC | 1 cut(s) | 165 |
| BciT130I | CCWGG | 1 cut(s) | 294 |
| BcoDI | GTCTC | 2 cut(s) | 181, 385 |
| BfaI | CTAG | 1 cut(s) | 257 |
| BfuAI | ACCTGC | 2 cut(s) | 125, 153 |
| BlnI | CCTAGG | 1 cut(s) | 256 |
| Bme1390I | CCNGG | 1 cut(s) | 294 |
| Bme18I | GGWCC | 1 cut(s) | 101 |
| BmgT120I | GGNCC | 2 cut(s) | 101, 536 |
| BmiI | GGNNCC | 1 cut(s) | 254 |
| BmrFI | CCNGG | 1 cut(s) | 294 |
| BmsI | GCATC | 1 cut(s) | 451 |
| BpiI | GAAGAC | 3 cut(s) | 72, 234, 292 |
| BpuEI | CTTGAG | 2 cut(s) | 66, 508 |
| BsaI | GGTCTC | 1 cut(s) | 181 |
| BsaJI | CCNNGG | 2 cut(s) | 97, 256 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 76, 427, 574 |
| Bse1I | ACTGG | 1 cut(s) | 81 |
| BseBI | CCWGG | 1 cut(s) | 294 |
| BseDI | CCNNGG | 2 cut(s) | 97, 256 |
| BseGI | GGATG | 3 cut(s) | 180, 561, 583 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 76, 427, 574 |
| BseMII | CTCAG | 1 cut(s) | 176 |
| BseNI | ACTGG | 1 cut(s) | 81 |
| BshFI | GGCC | 1 cut(s) | 538 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 76, 427, 574 |
| BsmAI | GTCTC | 2 cut(s) | 181, 385 |
| BsmI | GAATGC | 1 cut(s) | 442 |
| BsnI | GGCC | 1 cut(s) | 538 |
| Bso31I | GGTCTC | 1 cut(s) | 181 |
| BspANI | GGCC | 1 cut(s) | 538 |
| BspCNI | CTCAG | 1 cut(s) | 177 |
| BspLI | GGNNCC | 1 cut(s) | 254 |
| BspMI | ACCTGC | 2 cut(s) | 125, 153 |
| BspTNI | GGTCTC | 1 cut(s) | 181 |
| BsrI | ACTGG | 1 cut(s) | 81 |
| BssECI | CCNNGG | 2 cut(s) | 97, 256 |
| BssT1I | CCWWGG | 1 cut(s) | 256 |
| Bst2UI | CCWGG | 1 cut(s) | 294 |
| Bst4CI | ACNGT | 1 cut(s) | 101 |
| Bst6I | CTCTTC | 2 cut(s) | 149, 448 |
| BstDEI | CTNAG | 3 cut(s) | 185, 239, 411 |
| BstDSI | CCRYGG | 1 cut(s) | 97 |
| BstF5I | GGATG | 3 cut(s) | 180, 561, 583 |
| BstMAI | GTCTC | 2 cut(s) | 181, 385 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 131, 250 |
| BstNI | CCWGG | 1 cut(s) | 294 |
| BstSCI | CCNGG | 1 cut(s) | 292 |
| BstV2I | GAAGAC | 3 cut(s) | 72, 234, 292 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 111 |
| BsuRI | GGCC | 1 cut(s) | 538 |
| BtgI | CCRYGG | 1 cut(s) | 97 |
| BtsCI | GGATG | 3 cut(s) | 180, 561, 583 |
| BveI | ACCTGC | 2 cut(s) | 125, 153 |
| CaiI | CAGNNNCTG | 1 cut(s) | 76 |
| Cfr13I | GGNCC | 2 cut(s) | 101, 536 |
| CsiI | ACCWGGT | 1 cut(s) | 292 |
| Csp6I | GTAC | 1 cut(s) | 24 |
| CviAII | CATG | 1 cut(s) | 599 |
| CviJI | RGCY | 7 cut(s) | 48, 80, 244, 253, 483, 495, 538 |
| CviKI_1 | RGCY | 7 cut(s) | 48, 80, 244, 253, 483, 495, 538 |
| CviQI | GTAC | 1 cut(s) | 24 |
| DdeI | CTNAG | 3 cut(s) | 185, 239, 411 |
| Eam1104I | CTCTTC | 2 cut(s) | 149, 448 |
| EarI | CTCTTC | 2 cut(s) | 149, 448 |
| Eco130I | CCWWGG | 1 cut(s) | 256 |
| Eco31I | GGTCTC | 1 cut(s) | 181 |
| Eco47I | GGWCC | 1 cut(s) | 101 |
| EcoO109I | RGGNCCY | 1 cut(s) | 536 |
| EcoRII | CCWGG | 1 cut(s) | 292 |
| EcoT14I | CCWWGG | 1 cut(s) | 256 |
| ErhI | CCWWGG | 1 cut(s) | 256 |
| FaeI | CATG | 1 cut(s) | 602 |
| FaiI | YATR | 3 cut(s) | 212, 249, 600 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 123, 155, 479, 511 |
| FatI | CATG | 1 cut(s) | 598 |
| FokI | GGATG | 3 cut(s) | 187, 568, 590 |
| FspBI | CTAG | 1 cut(s) | 257 |
| HaeIII | GGCC | 1 cut(s) | 538 |
| Hin1II | CATG | 1 cut(s) | 602 |
| HinfI | GANTC | 2 cut(s) | 4, 398 |
| Hpy166II | GTNNAC | 2 cut(s) | 40, 591 |
| Hpy188I | TCNGA | 4 cut(s) | 186, 217, 406, 444 |
| Hpy188III | TCNNGA | 1 cut(s) | 421 |
| Hpy8I | GTNNAC | 2 cut(s) | 40, 591 |
| HpyAV | CCTTC | 1 cut(s) | 527 |
| HpyCH4III | ACNGT | 1 cut(s) | 101 |
| HpyCH4V | TGCA | 3 cut(s) | 125, 162, 598 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 131, 250 |
| HpyF3I | CTNAG | 3 cut(s) | 185, 239, 411 |
| Hsp92II | CATG | 1 cut(s) | 602 |
| LmnI | GCTCC | 1 cut(s) | 258 |
| LweI | GCATC | 1 cut(s) | 451 |
| MabI | ACCWGGT | 1 cut(s) | 292 |
| MaeI | CTAG | 1 cut(s) | 257 |
| MboII | GAAGA | 7 cut(s) | 77, 166, 236, 239, 297, 465, 470 |
| MfeI | CAATTG | 1 cut(s) | 447 |
| MluCI | AATT | 3 cut(s) | 319, 447, 563 |
| MlyI | GAGTC | 1 cut(s) | 407 |
| MnlI | CCTC | 6 cut(s) | 38, 55, 102, 197, 412, 475 |
| MroXI | GAANNNNTTC | 1 cut(s) | 563 |
| MseI | TTAA | 5 cut(s) | 141, 167, 198, 315, 607 |
| MspR9I | CCNGG | 1 cut(s) | 294 |
| MunI | CAATTG | 1 cut(s) | 447 |
| Mva1269I | GAATGC | 1 cut(s) | 442 |
| MvaI | CCWGG | 1 cut(s) | 294 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 131, 250 |
| NlaIII | CATG | 1 cut(s) | 602 |
| NlaIV | GGNNCC | 1 cut(s) | 254 |
| PctI | GAATGC | 1 cut(s) | 442 |
| PdmI | GAANNNNTTC | 1 cut(s) | 563 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 76, 427 |
| PleI | GAGTC | 1 cut(s) | 406 |
| PpsI | GAGTC | 1 cut(s) | 406 |
| Psp6I | CCWGG | 1 cut(s) | 292 |
| PspGI | CCWGG | 1 cut(s) | 292 |
| PspN4I | GGNNCC | 1 cut(s) | 254 |
| PspPI | GGNCC | 2 cut(s) | 101, 536 |
| PstNI | CAGNNNCTG | 1 cut(s) | 76 |
| RsaI | GTAC | 1 cut(s) | 25 |
| RsaNI | GTAC | 1 cut(s) | 24 |
| SaqAI | TTAA | 5 cut(s) | 141, 167, 198, 315, 607 |
| Sau96I | GGNCC | 2 cut(s) | 101, 536 |
| SchI | GAGTC | 1 cut(s) | 407 |
| ScrFI | CCNGG | 1 cut(s) | 294 |
| SetI | ASST | 6 cut(s) | 113, 139, 167, 269, 298, 485 |
| SexAI | ACCWGGT | 1 cut(s) | 292 |
| SfaNI | GCATC | 1 cut(s) | 451 |
| SinI | GGWCC | 1 cut(s) | 101 |
| SmlI | CTYRAG | 2 cut(s) | 81, 523 |
| SmoI | CTYRAG | 2 cut(s) | 81, 523 |
| Sse9I | AATT | 3 cut(s) | 319, 447, 563 |
| SspI | AATATT | 1 cut(s) | 196 |
| SspMI | CTAG | 1 cut(s) | 257 |
| StyD4I | CCNGG | 1 cut(s) | 292 |
| StyI | CCWWGG | 1 cut(s) | 256 |
| TaaI | ACNGT | 1 cut(s) | 101 |
| TasI | AATT | 3 cut(s) | 319, 447, 563 |
| TatI | WGTACW | 1 cut(s) | 23 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| Tru1I | TTAA | 5 cut(s) | 141, 167, 198, 315, 607 |
| Tru9I | TTAA | 5 cut(s) | 141, 167, 198, 315, 607 |
| TspDTI | ATGAA | 5 cut(s) | 191, 236, 449, 546, 572 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 76, 427 |
| VpaK11BI | GGWCC | 1 cut(s) | 101 |
| XapI | RAATTY | 1 cut(s) | 563 |
| XmaJI | CCTAGG | 1 cut(s) | 256 |
| XmnI | GAANNNNTTC | 1 cut(s) | 563 |
| XspI | CTAG | 1 cut(s) | 257 |