transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66380 |
| fragaria_vesca | FvH4_2g31020 FvH4_2g31020 FvH4_5g19400 FvH4_5g19400 FvH4_5g19400 |
| malus_domestica | MD04G1060200.v1.1 MD06G1053100.v1.1 MD15G1050300.v1.1 |
| prunus_persica | Prupe.1G404700_v2.0.a1 Prupe.1G404800_v2.0.a1 Prupe.5G065500_v2.0.a1 |
| pyrus_communis | pycom04g05380 pycom06g04480 pycom15g04870 |
| rosa_chinensis | RchiOBHm_Chr6g0311771 RchiOBHm_Chr7g0203911 |
| rosa_laevigata | RLG00000003500 RLG00000010375 |
| rosa_multiflora | Rmu_sc0002888.1_g000040 Rmu_sc0014006.1_g000003 Rmu_sc0015961.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00253470 Rroxscaffold_7G00157320 |
| rosa_rugosa | Rorug07G0079200.1 Rorug07G0079300 |
| rosa_samantha | Rh6AG506900 Rh6BG517700 Rh6CG523300 Rh6DG509200 Rh7AG209200 Rh7CG221600 Rh7DG216200 |
| rosa_wichuraiana | Rw6G044100 Rw7G018230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 195 |
| Acc36I | ACCTGC | 1 cut(s) | 26 |
| AccII | CGCG | 1 cut(s) | 408 |
| AclWI | GGATC | 1 cut(s) | 454 |
| AcsI | RAATTY | 1 cut(s) | 502 |
| AfaI | GTAC | 1 cut(s) | 375 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 127 |
| AgsI | TTSAA | 3 cut(s) | 7, 427, 502 |
| AjnI | CCWGG | 1 cut(s) | 193 |
| AluBI | AGCT | 1 cut(s) | 399 |
| AluI | AGCT | 1 cut(s) | 399 |
| AlwI | GGATC | 1 cut(s) | 454 |
| AoxI | GGCC | 1 cut(s) | 494 |
| ApeKI | GCWGC | 1 cut(s) | 311 |
| ApoI | RAATTY | 1 cut(s) | 502 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 419 |
| AspS9I | GGNCC | 1 cut(s) | 494 |
| BbsI | GAAGAC | 1 cut(s) | 193 |
| BbvI | GCAGC | 1 cut(s) | 323 |
| BccI | CCATC | 2 cut(s) | 66, 467 |
| BciT130I | CCWGG | 1 cut(s) | 195 |
| BfaI | CTAG | 1 cut(s) | 527 |
| BfuAI | ACCTGC | 1 cut(s) | 26 |
| BisI | GCNGC | 1 cut(s) | 312 |
| BlsI | GCNGC | 1 cut(s) | 313 |
| Bme1390I | CCNGG | 1 cut(s) | 195 |
| BmgT120I | GGNCC | 1 cut(s) | 494 |
| BmiI | GGNNCC | 1 cut(s) | 495 |
| BmrFI | CCNGG | 1 cut(s) | 195 |
| BmsI | GCATC | 1 cut(s) | 305 |
| BpiI | GAAGAC | 1 cut(s) | 193 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 311, 343 |
| BpmI | CTGGAG | 1 cut(s) | 474 |
| BsaJI | CCNNGG | 1 cut(s) | 157 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 127 |
| Bse1I | ACTGG | 1 cut(s) | 230 |
| BseBI | CCWGG | 1 cut(s) | 195 |
| BseDI | CCNNGG | 1 cut(s) | 157 |
| BseGI | GGATG | 3 cut(s) | 81, 519, 541 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 127 |
| BseMII | CTCAG | 3 cut(s) | 59, 154, 356 |
| BseNI | ACTGG | 1 cut(s) | 230 |
| BseRI | GAGGAG | 2 cut(s) | 319, 425 |
| BseXI | GCAGC | 1 cut(s) | 323 |
| Bsh1236I | CGCG | 1 cut(s) | 408 |
| BshFI | GGCC | 1 cut(s) | 496 |
| BsiSI | CCGG | 1 cut(s) | 183 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 127 |
| BsnI | GGCC | 1 cut(s) | 496 |
| Bsp143I | GATC | 4 cut(s) | 177, 249, 266, 446 |
| BspANI | GGCC | 1 cut(s) | 496 |
| BspCNI | CTCAG | 3 cut(s) | 60, 153, 355 |
| BspFNI | CGCG | 1 cut(s) | 408 |
| BspLI | GGNNCC | 1 cut(s) | 495 |
| BspMI | ACCTGC | 1 cut(s) | 26 |
| BspPI | GGATC | 1 cut(s) | 454 |
| BsrI | ACTGG | 1 cut(s) | 230 |
| BssECI | CCNNGG | 1 cut(s) | 157 |
| BssMI | GATC | 4 cut(s) | 177, 249, 266, 446 |
| BssT1I | CCWWGG | 1 cut(s) | 157 |
| Bst2UI | CCWGG | 1 cut(s) | 195 |
| Bst6I | CTCTTC | 2 cut(s) | 50, 120 |
| BstDEI | CTNAG | 4 cut(s) | 68, 86, 140, 342 |
| BstF5I | GGATG | 3 cut(s) | 81, 519, 541 |
| BstFNI | CGCG | 1 cut(s) | 408 |
| BstKTI | GATC | 4 cut(s) | 180, 252, 269, 449 |
| BstMBI | GATC | 4 cut(s) | 177, 249, 266, 446 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 405 |
| BstNI | CCWGG | 1 cut(s) | 195 |
| BstSCI | CCNGG | 1 cut(s) | 193 |
| BstUI | CGCG | 1 cut(s) | 408 |
| BstV1I | GCAGC | 1 cut(s) | 323 |
| BstV2I | GAAGAC | 1 cut(s) | 193 |
| BsuRI | GGCC | 1 cut(s) | 496 |
| BtsCI | GGATG | 3 cut(s) | 81, 519, 541 |
| BveI | ACCTGC | 1 cut(s) | 26 |
| Cfr13I | GGNCC | 1 cut(s) | 494 |
| Csp6I | GTAC | 1 cut(s) | 374 |
| CviAII | CATG | 3 cut(s) | 368, 433, 557 |
| CviJI | RGCY | 5 cut(s) | 145, 340, 399, 477, 496 |
| CviKI_1 | RGCY | 5 cut(s) | 145, 340, 399, 477, 496 |
| CviQI | GTAC | 1 cut(s) | 374 |
| DdeI | CTNAG | 4 cut(s) | 68, 86, 140, 342 |
| DpnI | GATC | 4 cut(s) | 179, 251, 268, 448 |
| DpnII | GATC | 4 cut(s) | 177, 249, 266, 446 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 195 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 195 |
| Eam1104I | CTCTTC | 2 cut(s) | 50, 120 |
| EarI | CTCTTC | 2 cut(s) | 50, 120 |
| Eco130I | CCWWGG | 1 cut(s) | 157 |
| EcoO109I | RGGNCCY | 1 cut(s) | 494 |
| EcoRII | CCWGG | 1 cut(s) | 193 |
| EcoT14I | CCWWGG | 1 cut(s) | 157 |
| ErhI | CCWWGG | 1 cut(s) | 157 |
| FaeI | CATG | 3 cut(s) | 371, 436, 560 |
| FaiI | YATR | 6 cut(s) | 113, 150, 258, 369, 434, 558 |
| FatI | CATG | 3 cut(s) | 367, 432, 556 |
| Fnu4HI | GCNGC | 1 cut(s) | 312 |
| FokI | GGATG | 3 cut(s) | 88, 526, 548 |
| Fsp4HI | GCNGC | 1 cut(s) | 312 |
| FspBI | CTAG | 1 cut(s) | 527 |
| GluI | GCNGC | 1 cut(s) | 312 |
| GsuI | CTGGAG | 1 cut(s) | 474 |
| HaeIII | GGCC | 1 cut(s) | 496 |
| HapII | CCGG | 1 cut(s) | 183 |
| Hin1II | CATG | 3 cut(s) | 371, 436, 560 |
| HpaII | CCGG | 1 cut(s) | 183 |
| Hpy166II | GTNNAC | 1 cut(s) | 549 |
| Hpy188I | TCNGA | 3 cut(s) | 118, 337, 345 |
| Hpy188III | TCNNGA | 2 cut(s) | 453, 527 |
| Hpy8I | GTNNAC | 1 cut(s) | 549 |
| HpyCH4V | TGCA | 4 cut(s) | 35, 63, 296, 556 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 405 |
| HpyF3I | CTNAG | 4 cut(s) | 68, 86, 140, 342 |
| Hsp92II | CATG | 3 cut(s) | 371, 436, 560 |
| Kzo9I | GATC | 4 cut(s) | 177, 249, 266, 446 |
| LpnPI | CCDG | 9 cut(s) | 21, 127, 151, 180, 196, 207, 211, 321, 438 |
| Lsp1109I | GCAGC | 1 cut(s) | 323 |
| LweI | GCATC | 1 cut(s) | 305 |
| MaeI | CTAG | 1 cut(s) | 527 |
| MalI | GATC | 4 cut(s) | 179, 251, 268, 448 |
| MboI | GATC | 4 cut(s) | 177, 249, 266, 446 |
| MboII | GAAGA | 6 cut(s) | 67, 137, 198, 259, 401, 415 |
| MfeI | CAATTG | 1 cut(s) | 378 |
| MluCI | AATT | 4 cut(s) | 15, 220, 378, 502 |
| MnlI | CCTC | 7 cut(s) | 98, 121, 337, 340, 351, 403, 484 |
| MroXI | GAANNNNTTC | 1 cut(s) | 419 |
| MseI | TTAA | 5 cut(s) | 14, 99, 216, 356, 441 |
| MspI | CCGG | 1 cut(s) | 183 |
| MspR9I | CCNGG | 1 cut(s) | 195 |
| MunI | CAATTG | 1 cut(s) | 378 |
| MvaI | CCWGG | 1 cut(s) | 195 |
| MvnI | CGCG | 1 cut(s) | 408 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 405 |
| NdeII | GATC | 4 cut(s) | 177, 249, 266, 446 |
| NlaIII | CATG | 3 cut(s) | 371, 436, 560 |
| NlaIV | GGNNCC | 1 cut(s) | 495 |
| PdmI | GAANNNNTTC | 1 cut(s) | 419 |
| PkrI | GCNGC | 1 cut(s) | 313 |
| Psp6I | CCWGG | 1 cut(s) | 193 |
| PspGI | CCWGG | 1 cut(s) | 193 |
| PspN4I | GGNNCC | 1 cut(s) | 495 |
| PspPI | GGNCC | 1 cut(s) | 494 |
| RsaI | GTAC | 1 cut(s) | 375 |
| RsaNI | GTAC | 1 cut(s) | 374 |
| SaqAI | TTAA | 5 cut(s) | 14, 99, 216, 356, 441 |
| SatI | GCNGC | 1 cut(s) | 312 |
| Sau3AI | GATC | 4 cut(s) | 177, 249, 266, 446 |
| Sau96I | GGNCC | 1 cut(s) | 494 |
| ScrFI | CCNGG | 1 cut(s) | 195 |
| SetI | ASST | 4 cut(s) | 12, 40, 170, 401 |
| SfaNI | GCATC | 1 cut(s) | 305 |
| Sse9I | AATT | 4 cut(s) | 15, 220, 378, 502 |
| SspI | AATATT | 1 cut(s) | 97 |
| SspMI | CTAG | 1 cut(s) | 527 |
| StyD4I | CCNGG | 1 cut(s) | 193 |
| StyI | CCWWGG | 1 cut(s) | 157 |
| TaqI | TCGA | 2 cut(s) | 199, 401 |
| TasI | AATT | 4 cut(s) | 15, 220, 378, 502 |
| Tru1I | TTAA | 5 cut(s) | 14, 99, 216, 356, 441 |
| Tru9I | TTAA | 5 cut(s) | 14, 99, 216, 356, 441 |
| TseI | GCWGC | 1 cut(s) | 311 |
| TspDTI | ATGAA | 4 cut(s) | 92, 137, 449, 530 |
| XapI | RAATTY | 1 cut(s) | 502 |
| XbaI | TCTAGA | 1 cut(s) | 526 |
| XmnI | GAANNNNTTC | 1 cut(s) | 419 |
| XspI | CTAG | 1 cut(s) | 527 |