transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66380 |
| fragaria_vesca | FvH4_2g31020 FvH4_2g31020 FvH4_5g19400 FvH4_5g19400 FvH4_5g19400 |
| malus_domestica | MD04G1060200.v1.1 MD06G1053100.v1.1 MD15G1050300.v1.1 |
| prunus_persica | Prupe.1G404700_v2.0.a1 Prupe.1G404800_v2.0.a1 Prupe.5G065500_v2.0.a1 |
| pyrus_communis | pycom04g05380 pycom06g04480 pycom15g04870 |
| rosa_chinensis | RchiOBHm_Chr6g0311771 RchiOBHm_Chr7g0203911 |
| rosa_laevigata | RLG00000003500 RLG00000010375 |
| rosa_multiflora | Rmu_sc0002888.1_g000040 Rmu_sc0014006.1_g000003 Rmu_sc0015961.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00253470 Rroxscaffold_7G00157320 |
| rosa_rugosa | Rorug07G0079200.1 Rorug07G0079300 |
| rosa_samantha | Rh6AG506900 Rh6BG517700 Rh6CG523300 Rh6DG509200 Rh7AG209200 Rh7CG221600 Rh7DG216200 |
| rosa_wichuraiana | Rw6G044100 Rw7G018230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 128 |
| AclWI | GGATC | 1 cut(s) | 31 |
| AcsI | RAATTY | 2 cut(s) | 331, 379 |
| AcuI | CTGAAG | 1 cut(s) | 540 |
| AfaI | GTAC | 1 cut(s) | 427 |
| AgsI | TTSAA | 3 cut(s) | 145, 181, 384 |
| AjnI | CCWGG | 1 cut(s) | 295 |
| AluBI | AGCT | 3 cut(s) | 256, 389, 562 |
| AluI | AGCT | 3 cut(s) | 256, 389, 562 |
| Alw21I | GWGCWC | 1 cut(s) | 391 |
| Alw26I | GTCTC | 2 cut(s) | 184, 389 |
| AlwI | GGATC | 1 cut(s) | 31 |
| ApoI | RAATTY | 2 cut(s) | 331, 379 |
| AspLEI | GCGC | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 1 cut(s) | 556 |
| BanII | GRGCYC | 1 cut(s) | 391 |
| BbsI | GAAGAC | 2 cut(s) | 125, 576 |
| Bbv12I | GWGCWC | 1 cut(s) | 391 |
| BccI | CCATC | 3 cut(s) | 14, 108, 168 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 497, 531 |
| BciT130I | CCWGG | 1 cut(s) | 297 |
| BcoDI | GTCTC | 2 cut(s) | 184, 389 |
| BfaI | CTAG | 1 cut(s) | 260 |
| BfmI | CTRYAG | 1 cut(s) | 374 |
| BfuAI | ACCTGC | 1 cut(s) | 128 |
| Bme1390I | CCNGG | 1 cut(s) | 297 |
| BmiI | GGNNCC | 2 cut(s) | 6, 526 |
| BmrFI | CCNGG | 1 cut(s) | 297 |
| BpiI | GAAGAC | 2 cut(s) | 125, 576 |
| BpmI | CTGGAG | 1 cut(s) | 557 |
| BpuEI | CTTGAG | 2 cut(s) | 375, 578 |
| Bsa29I | ATCGAT | 1 cut(s) | 148 |
| BsaI | GGTCTC | 1 cut(s) | 184 |
| BsaJI | CCNNGG | 1 cut(s) | 296 |
| BseBI | CCWGG | 1 cut(s) | 297 |
| BseCI | ATCGAT | 1 cut(s) | 148 |
| BseDI | CCNNGG | 1 cut(s) | 296 |
| BseGI | GGATG | 1 cut(s) | 484 |
| BseMII | CTCAG | 1 cut(s) | 420 |
| BseRI | GAGGAG | 1 cut(s) | 465 |
| BshVI | ATCGAT | 1 cut(s) | 148 |
| BsiHKAI | GWGCWC | 1 cut(s) | 391 |
| BslFI | GGGAC | 1 cut(s) | 449 |
| BsmAI | GTCTC | 2 cut(s) | 184, 389 |
| BsmFI | GGGAC | 1 cut(s) | 449 |
| Bso31I | GGTCTC | 1 cut(s) | 184 |
| Bsp1286I | GDGCHC | 1 cut(s) | 391 |
| Bsp143I | GATC | 1 cut(s) | 23 |
| BspCNI | CTCAG | 1 cut(s) | 421 |
| BspDI | ATCGAT | 1 cut(s) | 148 |
| BspLI | GGNNCC | 2 cut(s) | 6, 526 |
| BspMAI | CTGCAG | 1 cut(s) | 378 |
| BspMI | ACCTGC | 1 cut(s) | 128 |
| BspPI | GGATC | 1 cut(s) | 31 |
| BspTNI | GGTCTC | 1 cut(s) | 184 |
| BssECI | CCNNGG | 1 cut(s) | 296 |
| BssMI | GATC | 1 cut(s) | 23 |
| Bst2UI | CCWGG | 1 cut(s) | 297 |
| Bst4CI | ACNGT | 2 cut(s) | 124, 422 |
| Bst6I | CTCTTC | 2 cut(s) | 152, 222 |
| BstDEI | CTNAG | 2 cut(s) | 242, 429 |
| BstF5I | GGATG | 1 cut(s) | 484 |
| BstHHI | GCGC | 1 cut(s) | 53 |
| BstKTI | GATC | 1 cut(s) | 26 |
| BstMAI | GTCTC | 2 cut(s) | 184, 389 |
| BstMBI | GATC | 1 cut(s) | 23 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 59, 134, 253, 298 |
| BstNI | CCWGG | 1 cut(s) | 297 |
| BstSCI | CCNGG | 1 cut(s) | 295 |
| BstSFI | CTRYAG | 1 cut(s) | 374 |
| BstV2I | GAAGAC | 2 cut(s) | 125, 576 |
| Bsu15I | ATCGAT | 1 cut(s) | 148 |
| BsuTUI | ATCGAT | 1 cut(s) | 148 |
| BtsCI | GGATG | 1 cut(s) | 484 |
| BtsI | GCAGTG | 1 cut(s) | 371 |
| BtsIMutI | CAGTG | 3 cut(s) | 129, 371, 427 |
| BveI | ACCTGC | 1 cut(s) | 128 |
| CfoI | GCGC | 1 cut(s) | 53 |
| ClaI | ATCGAT | 1 cut(s) | 148 |
| Csp6I | GTAC | 1 cut(s) | 426 |
| CviAII | CATG | 3 cut(s) | 54, 101, 577 |
| CviJI | RGCY | 9 cut(s) | 5, 128, 247, 256, 292, 389, 525, 535, 562 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 128, 247, 256, 292, 389, 525, 535, 562 |
| CviQI | GTAC | 1 cut(s) | 426 |
| DdeI | CTNAG | 2 cut(s) | 242, 429 |
| DpnI | GATC | 1 cut(s) | 25 |
| DpnII | GATC | 1 cut(s) | 23 |
| Eam1104I | CTCTTC | 2 cut(s) | 152, 222 |
| EarI | CTCTTC | 2 cut(s) | 152, 222 |
| Ecl136II | GAGCTC | 1 cut(s) | 389 |
| Eco24I | GRGCYC | 1 cut(s) | 391 |
| Eco31I | GGTCTC | 1 cut(s) | 184 |
| Eco53kI | GAGCTC | 1 cut(s) | 389 |
| Eco57I | CTGAAG | 1 cut(s) | 540 |
| EcoICRI | GAGCTC | 1 cut(s) | 389 |
| EcoRI | GAATTC | 2 cut(s) | 331, 379 |
| EcoRII | CCWGG | 1 cut(s) | 295 |
| EcoT38I | GRGCYC | 1 cut(s) | 391 |
| FaeI | CATG | 3 cut(s) | 57, 104, 580 |
| FaiI | YATR | 7 cut(s) | 41, 55, 102, 134, 531, 578, 608 |
| FaqI | GGGAC | 1 cut(s) | 449 |
| FatI | CATG | 3 cut(s) | 53, 100, 576 |
| FokI | GGATG | 1 cut(s) | 491 |
| FriOI | GRGCYC | 1 cut(s) | 391 |
| FspBI | CTAG | 1 cut(s) | 260 |
| GlaI | GCGC | 1 cut(s) | 52 |
| GsuI | CTGGAG | 1 cut(s) | 557 |
| HhaI | GCGC | 1 cut(s) | 53 |
| Hin1II | CATG | 3 cut(s) | 57, 104, 580 |
| Hin6I | GCGC | 1 cut(s) | 51 |
| HinP1I | GCGC | 1 cut(s) | 51 |
| HinfI | GANTC | 2 cut(s) | 97, 145 |
| HphI | GGTGA | 1 cut(s) | 556 |
| Hpy166II | GTNNAC | 1 cut(s) | 547 |
| Hpy188I | TCNGA | 2 cut(s) | 220, 478 |
| Hpy188III | TCNNGA | 3 cut(s) | 384, 392, 557 |
| Hpy8I | GTNNAC | 1 cut(s) | 547 |
| HpyAV | CCTTC | 4 cut(s) | 282, 417, 440, 515 |
| HpyCH4III | ACNGT | 2 cut(s) | 124, 422 |
| HpyCH4V | TGCA | 4 cut(s) | 83, 107, 165, 376 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 59, 134, 253, 298 |
| HpyF3I | CTNAG | 2 cut(s) | 242, 429 |
| Hsp92II | CATG | 3 cut(s) | 57, 104, 580 |
| HspAI | GCGC | 1 cut(s) | 51 |
| Kzo9I | GATC | 1 cut(s) | 23 |
| LmnI | GCTCC | 2 cut(s) | 10, 530 |
| LpnPI | CCDG | 7 cut(s) | 123, 253, 270, 282, 309, 425, 521 |
| MaeI | CTAG | 1 cut(s) | 260 |
| MalI | GATC | 1 cut(s) | 25 |
| MboI | GATC | 1 cut(s) | 23 |
| MboII | GAAGA | 9 cut(s) | 25, 80, 130, 169, 239, 452, 455, 496, 581 |
| MhlI | GDGCHC | 1 cut(s) | 391 |
| MluCI | AATT | 7 cut(s) | 36, 181, 331, 379, 472, 484, 580 |
| MnlI | CCTC | 6 cut(s) | 58, 200, 223, 424, 443, 446 |
| MseI | TTAA | 2 cut(s) | 201, 483 |
| MspR9I | CCNGG | 1 cut(s) | 297 |
| MvaI | CCWGG | 1 cut(s) | 297 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 59, 134, 253, 298 |
| NdeII | GATC | 1 cut(s) | 23 |
| NlaIII | CATG | 3 cut(s) | 57, 104, 580 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 526 |
| PfeI | GAWTC | 2 cut(s) | 97, 145 |
| Psp124BI | GAGCTC | 1 cut(s) | 391 |
| Psp6I | CCWGG | 1 cut(s) | 295 |
| PspGI | CCWGG | 1 cut(s) | 295 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 526 |
| PstI | CTGCAG | 1 cut(s) | 378 |
| RsaI | GTAC | 1 cut(s) | 427 |
| RsaNI | GTAC | 1 cut(s) | 426 |
| SacI | GAGCTC | 1 cut(s) | 391 |
| SaqAI | TTAA | 2 cut(s) | 201, 483 |
| Sau3AI | GATC | 1 cut(s) | 23 |
| ScrFI | CCNGG | 1 cut(s) | 297 |
| SduI | GDGCHC | 1 cut(s) | 391 |
| SetI | ASST | 7 cut(s) | 142, 258, 272, 391, 409, 564, 597 |
| SfcI | CTRYAG | 1 cut(s) | 374 |
| SmlI | CTYRAG | 2 cut(s) | 390, 557 |
| SmoI | CTYRAG | 2 cut(s) | 390, 557 |
| Sse9I | AATT | 7 cut(s) | 36, 181, 331, 379, 472, 484, 580 |
| SspI | AATATT | 1 cut(s) | 604 |
| SspMI | CTAG | 1 cut(s) | 260 |
| SstI | GAGCTC | 1 cut(s) | 391 |
| StyD4I | CCNGG | 1 cut(s) | 295 |
| TaaI | ACNGT | 2 cut(s) | 124, 422 |
| TaqI | TCGA | 4 cut(s) | 26, 148, 489, 507 |
| TasI | AATT | 7 cut(s) | 36, 181, 331, 379, 472, 484, 580 |
| TfiI | GAWTC | 2 cut(s) | 97, 145 |
| Tru1I | TTAA | 2 cut(s) | 201, 483 |
| Tru9I | TTAA | 2 cut(s) | 201, 483 |
| TscAI | CASTG | 3 cut(s) | 129, 378, 427 |
| TspDTI | ATGAA | 5 cut(s) | 56, 89, 240, 582, 593 |
| TspRI | CASTG | 3 cut(s) | 129, 378, 427 |
| XapI | RAATTY | 2 cut(s) | 331, 379 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 419 |
| XspI | CTAG | 1 cut(s) | 260 |