Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006234

Physical Location & Seq

Genomic Coordinates Forward (+)

37044597 .. 37046246

Gene Structure 1650 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G432900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 822 bp

ATGTCTTGCTTACAGCAAAACTCTGTTTTGGGATCTCCCAATTCCAATTTAGGCACTTGTGGTGGTGGAGAGTTGTTGAAGCTAGAAAAGATGGGGATGAATGTGAACTCATATCTTAATTCAAGCTCTGCATTAATGGAGAAAGGGGTGATCAAAGAAAGTACTGGCAAGGCTGCAAGTGGTGGTGGTAATGAATCAGAGCATGGCATGCACACTTGGACTGAGAGGGAAAGAAGGAAGAAGATGAGGGACATGTTCTCTAGCCTTCATGCTCTGCTTCCTCAGCTTCCAGCTAAGGCAGATAAGTCCACCATTGTTGATGAGTCAGTGAGATATATCAAGTCCTTGGAAAAAACTCTTCAAACAAAACAAAAACAAAAGCTTGACAAACTCCAGAGCACTAGTGCATTGATAGCATCAAACACAGAGCTAGCTGGTGAGACAAGGGAAGCGTTTTTGGCTGATCTTCTACATCCATCAAAGAACTTGATGGTCACAAATGCATTCCCAGCTTCTCTTTCTCCCGCTTGCTTCGAGACGTGGTTTTCGCCAACTGTTGTCGTGAACATTTGCGGCCCTGATGCTCAGTTCAGTGTTTGTTCGCCGAGAAAGCCAGGGCTCTTGACAACCATCTTGTACATTCTAGAGAAGCATGAACTGGATGTAGTCTCTGCTCACGTCTCCTCGGATCAATATCGTTGCATGTACATGATCCATGCTCATGCGGGTGGAGCTTGTGATCATTTCCCTGAGGCATTATCAGTGGAGGACACATTCAAACTAGCAGCAGGTGAAATAAATTTGTGGCTCTTGTCCTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

274

Amino Acids

29.78

Weight (kDa)

6.5

Isoelectric Point (pI)

50.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006234)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49770
fragaria_vesca	FvH4_2g05810
malus_domestica	MD05G1083300.v1.1 MD15G1079900.v1.1
prunus_persica	Prupe.1G432900_v2.0.a1 Prupe.8G127700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0257881 RchiOBHm_Chr6g0308241
rosa_laevigata	RLG00000010655 RLG00000014735
rosa_multiflora	Rmu_co8385913.1_g000001 Rmu_sc0000077.1_g000033
rosa_roxburghii	Rroxscaffold_7G00209030
rosa_rugosa	Rorug05G0567100 Rorug06G0365300 Rorug06G0365300 Rorug06G0365400
rosa_samantha	Rh6AG084200 Rh6AG474300 Rh6BG078800 Rh6BG485000 Rh6CG073500 Rh6CG490000 Rh6DG070400 Rh6DG476400
rosa_wichuraiana	Rw6G007590 Rw6G041370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	779
Acc36I	ACCTGC	1 cut(s)	779
AciI	CCGC	3 cut(s)	525, 573, 725
AclWI	GGATC	3 cut(s)	40, 696, 706
AcsI	RAATTY	1 cut(s)	799
AfaI	GTAC	3 cut(s)	163, 638, 707
AflIII	ACRYGT	1 cut(s)	252
AgsI	TTSAA	4 cut(s)	79, 123, 362, 778
AhlI	ACTAGT	1 cut(s)	401
AjiI	CACGTC	2 cut(s)	540, 679
AjnI	CCWGG	1 cut(s)	613
AluBI	AGCT	9 cut(s)	82, 126, 286, 293, 382, 430, 434, 512, 734
AluI	AGCT	9 cut(s)	82, 126, 286, 293, 382, 430, 434, 512, 734
Alw21I	GWGCWC	1 cut(s)	401
Alw26I	GTCTC	4 cut(s)	434, 530, 673, 685
AlwI	GGATC	3 cut(s)	40, 696, 706
AoxI	GGCC	1 cut(s)	574
ApeKI	GCWGC	2 cut(s)	173, 785
ApoI	RAATTY	1 cut(s)	799
ArsI	GACNNNNNNTTYG	2 cut(s)	529, 561
AseI	ATTAAT	1 cut(s)	134
AspS9I	GGNCC	1 cut(s)	575
AsuHPI	GGTGA	3 cut(s)	160, 449, 803
AsuNHI	GCTAGC	1 cut(s)	430
AxyI	CCTNAGG	1 cut(s)	750
BanII	GRGCYC	1 cut(s)	621
Bbv12I	GWGCWC	1 cut(s)	401
BbvCI	CCTCAGC	1 cut(s)	282
BbvI	GCAGC	2 cut(s)	160, 797
BccI	CCATC	4 cut(s)	85, 484, 484, 638
BciT130I	CCWGG	1 cut(s)	615
BclI	TGATCA	2 cut(s)	150, 739
BcoDI	GTCTC	4 cut(s)	434, 530, 673, 685
BcuI	ACTAGT	1 cut(s)	401
BfaI	CTAG	6 cut(s)	83, 261, 402, 431, 644, 782
BfuAI	ACCTGC	1 cut(s)	779
BisI	GCNGC	3 cut(s)	174, 574, 786
BlsI	GCNGC	3 cut(s)	175, 575, 787
BmcAI	AGTACT	1 cut(s)	163
Bme1390I	CCNGG	1 cut(s)	615
BmgBI	CACGTC	2 cut(s)	540, 679
BmgT120I	GGNCC	1 cut(s)	575
BmrFI	CCNGG	1 cut(s)	615
BmsI	GCATC	2 cut(s)	425, 571
BmtI	GCTAGC	1 cut(s)	434
BpmI	CTGGAG	1 cut(s)	377
Bpu10I	CCTNAGC	2 cut(s)	282, 294
BsaBI	GATNNNNATC	1 cut(s)	693
BsaJI	CCNNGG	3 cut(s)	345, 614, 684
Bse1I	ACTGG	2 cut(s)	169, 663
Bse21I	CCTNAGG	1 cut(s)	750
Bse8I	GATNNNNATC	1 cut(s)	693
BseBI	CCWGG	1 cut(s)	615
BseDI	CCNNGG	3 cut(s)	345, 614, 684
BseGI	GGATG	3 cut(s)	102, 472, 667
BseJI	GATNNNNATC	1 cut(s)	693
BseMII	CTCAG	4 cut(s)	213, 296, 599, 741
BseNI	ACTGG	2 cut(s)	169, 663
BseRI	GAGGAG	1 cut(s)	673
BseXI	GCAGC	2 cut(s)	160, 797
BseYI	CCCAGC	1 cut(s)	508
BshFI	GGCC	1 cut(s)	576
BsiHKAI	GWGCWC	1 cut(s)	401
BslFI	GGGAC	1 cut(s)	263
BsmAI	GTCTC	4 cut(s)	434, 530, 673, 685
BsmBI	CGTCTC	2 cut(s)	530, 685
BsmFI	GGGAC	1 cut(s)	263
BsmI	GAATGC	1 cut(s)	503
BsnI	GGCC	1 cut(s)	576
Bsp1286I	GDGCHC	2 cut(s)	401, 621
Bsp1407I	TGTACA	2 cut(s)	636, 705
Bsp143I	GATC	6 cut(s)	32, 150, 463, 688, 711, 739
BspACI	CCGC	3 cut(s)	525, 573, 725
BspANI	GGCC	1 cut(s)	576
BspCNI	CTCAG	4 cut(s)	214, 295, 598, 742
BspMI	ACCTGC	1 cut(s)	779
BspOI	GCTAGC	1 cut(s)	434
BspPI	GGATC	3 cut(s)	40, 696, 706
BsrGI	TGTACA	2 cut(s)	636, 705
BsrI	ACTGG	2 cut(s)	169, 663
BssECI	CCNNGG	3 cut(s)	345, 614, 684
BssMI	GATC	6 cut(s)	32, 150, 463, 688, 711, 739
BssT1I	CCWWGG	1 cut(s)	345
Bst2UI	CCWGG	1 cut(s)	615
Bst4CI	ACNGT	1 cut(s)	556
Bst6I	CTCTTC	1 cut(s)	363
BstAPI	GCANNNNNTGC	1 cut(s)	208
BstAUI	TGTACA	2 cut(s)	636, 705
BstC8I	GCNNGC	3 cut(s)	209, 432, 529
BstDEI	CTNAG	5 cut(s)	222, 282, 294, 585, 750
BstF5I	GGATG	3 cut(s)	102, 472, 667
BstKTI	GATC	6 cut(s)	35, 153, 466, 691, 714, 742
BstMAI	GTCTC	4 cut(s)	434, 530, 673, 685
BstMBI	GATC	6 cut(s)	32, 150, 463, 688, 711, 739
BstMWI	GCNNNNNNNGC	7 cut(s)	208, 283, 413, 458, 509, 610, 731
BstNI	CCWGG	1 cut(s)	615
BstNSI	RCATGY	3 cut(s)	211, 256, 706
BstSCI	CCNGG	1 cut(s)	613
BstV1I	GCAGC	2 cut(s)	160, 797
BstX2I	RGATCY	1 cut(s)	32
BstYI	RGATCY	1 cut(s)	32
Bsu36I	CCTNAGG	1 cut(s)	750
BsuRI	GGCC	1 cut(s)	576
BtrI	CACGTC	2 cut(s)	540, 679
BtsCI	GGATG	3 cut(s)	102, 472, 667
BtsIMutI	CAGTG	3 cut(s)	333, 598, 768
BveI	ACCTGC	1 cut(s)	779
Cac8I	GCNNGC	3 cut(s)	209, 432, 529
Cfr13I	GGNCC	1 cut(s)	575
Csp6I	GTAC	3 cut(s)	162, 637, 706
CspCI	CAANNNNNGTGG	2 cut(s)	298, 333
CviAII	CATG	9 cut(s)	203, 208, 253, 269, 653, 703, 709, 716, 722
CviQI	GTAC	3 cut(s)	162, 637, 706
DdeI	CTNAG	5 cut(s)	222, 282, 294, 585, 750
DpnI	GATC	6 cut(s)	34, 152, 465, 690, 713, 741
DpnII	GATC	6 cut(s)	32, 150, 463, 688, 711, 739
Eam1104I	CTCTTC	1 cut(s)	363
EarI	CTCTTC	1 cut(s)	363
Eco130I	CCWWGG	1 cut(s)	345
Eco24I	GRGCYC	1 cut(s)	621
Eco81I	CCTNAGG	1 cut(s)	750
EcoRII	CCWGG	1 cut(s)	613
EcoT14I	CCWWGG	1 cut(s)	345
EcoT22I	ATGCAT	1 cut(s)	505
EcoT38I	GRGCYC	1 cut(s)	621
ErhI	CCWWGG	1 cut(s)	345
Esp3I	CGTCTC	2 cut(s)	530, 685
FaeI	CATG	9 cut(s)	206, 211, 256, 272, 656, 706, 712, 719, 725
FaqI	GGGAC	1 cut(s)	263
FatI	CATG	9 cut(s)	202, 207, 252, 268, 652, 702, 708, 715, 721
FauI	CCCGC	2 cut(s)	532, 718
FbaI	TGATCA	2 cut(s)	150, 739
Fnu4HI	GCNGC	3 cut(s)	174, 574, 786
FokI	GGATG	3 cut(s)	109, 459, 674
FriOI	GRGCYC	1 cut(s)	621
Fsp4HI	GCNGC	3 cut(s)	174, 574, 786
FspBI	CTAG	6 cut(s)	83, 261, 402, 431, 644, 782
GluI	GCNGC	3 cut(s)	174, 574, 786
GsaI	CCCAGC	1 cut(s)	512
GsuI	CTGGAG	1 cut(s)	377
HaeIII	GGCC	1 cut(s)	576
Hin1II	CATG	9 cut(s)	206, 211, 256, 272, 656, 706, 712, 719, 725
HindIII	AAGCTT	1 cut(s)	380
HinfI	GANTC	2 cut(s)	194, 323
HphI	GGTGA	3 cut(s)	160, 449, 803
Hpy166II	GTNNAC	3 cut(s)	106, 309, 565
Hpy188I	TCNGA	2 cut(s)	199, 688
Hpy188III	TCNNGA	5 cut(s)	394, 535, 562, 622, 644
Hpy8I	GTNNAC	3 cut(s)	106, 309, 565
HpyAV	CCTTC	2 cut(s)	228, 275
HpyCH4III	ACNGT	1 cut(s)	556
HpyCH4IV	ACGT	2 cut(s)	539, 678
HpyCH4V	TGCA	6 cut(s)	131, 176, 211, 407, 503, 702
HpyF10VI	GCNNNNNNNGC	7 cut(s)	208, 283, 413, 458, 509, 610, 731
HpyF3I	CTNAG	5 cut(s)	222, 282, 294, 585, 750
HpySE526I	ACGT	2 cut(s)	539, 678
Hsp92II	CATG	9 cut(s)	206, 211, 256, 272, 656, 706, 712, 719, 725
Ksp22I	TGATCA	2 cut(s)	150, 739
Kzo9I	GATC	6 cut(s)	32, 150, 463, 688, 711, 739
LmnI	GCTCC	1 cut(s)	731
Lsp1109I	GCAGC	2 cut(s)	160, 797
LweI	GCATC	2 cut(s)	425, 571
MaeI	CTAG	6 cut(s)	83, 261, 402, 431, 644, 782
MaeII	ACGT	2 cut(s)	539, 678
MaeIII	GTNAC	1 cut(s)	493
MalI	GATC	6 cut(s)	34, 152, 465, 690, 713, 741
MboI	GATC	6 cut(s)	32, 150, 463, 688, 711, 739
MboII	GAAGA	4 cut(s)	250, 253, 350, 458
MflI	RGATCY	1 cut(s)	32
MhlI	GDGCHC	2 cut(s)	401, 621
MluCI	AATT	4 cut(s)	40, 46, 118, 799
MlyI	GAGTC	1 cut(s)	332
MnlI	CCTC	6 cut(s)	219, 240, 291, 694, 745, 760
Mph1103I	ATGCAT	1 cut(s)	505
MseI	TTAA	2 cut(s)	117, 134
MslI	CAYNNNNRTG	3 cut(s)	707, 720, 726
MspR9I	CCNGG	1 cut(s)	615
Mva1269I	GAATGC	1 cut(s)	503
MvaI	CCWGG	1 cut(s)	615
MwoI	GCNNNNNNNGC	7 cut(s)	208, 283, 413, 458, 509, 610, 731
NdeII	GATC	6 cut(s)	32, 150, 463, 688, 711, 739
NheI	GCTAGC	1 cut(s)	430
NlaIII	CATG	9 cut(s)	206, 211, 256, 272, 656, 706, 712, 719, 725
NmeAIII	GCCGAG	1 cut(s)	630
NmuCI	GTSAC	1 cut(s)	493
NsiI	ATGCAT	1 cut(s)	505
NspI	RCATGY	3 cut(s)	211, 256, 706
PaeI	GCATGC	1 cut(s)	211
PaqCI	CACCTGC	1 cut(s)	779
PciI	ACATGT	1 cut(s)	252
PctI	GAATGC	1 cut(s)	503
PfeI	GAWTC	1 cut(s)	194
PkrI	GCNGC	3 cut(s)	175, 575, 787
PleI	GAGTC	1 cut(s)	331
PpsI	GAGTC	1 cut(s)	331
PscI	ACATGT	1 cut(s)	252
PshBI	ATTAAT	1 cut(s)	134
Psp6I	CCWGG	1 cut(s)	613
PspFI	CCCAGC	1 cut(s)	508
PspGI	CCWGG	1 cut(s)	613
PspPI	GGNCC	1 cut(s)	575
PsuI	RGATCY	1 cut(s)	32
RsaI	GTAC	3 cut(s)	163, 638, 707
RsaNI	GTAC	3 cut(s)	162, 637, 706
RseI	CAYNNNNRTG	3 cut(s)	707, 720, 726
SaqAI	TTAA	2 cut(s)	117, 134
SatI	GCNGC	3 cut(s)	174, 574, 786
Sau3AI	GATC	6 cut(s)	32, 150, 463, 688, 711, 739
Sau96I	GGNCC	1 cut(s)	575
ScaI	AGTACT	1 cut(s)	163
SchI	GAGTC	1 cut(s)	332
ScrFI	CCNGG	1 cut(s)	615
SduI	GDGCHC	2 cut(s)	401, 621
SfaNI	GCATC	2 cut(s)	425, 571
SmiMI	CAYNNNNRTG	3 cut(s)	707, 720, 726
SpeI	ACTAGT	1 cut(s)	401
SphI	GCATGC	1 cut(s)	211
Sse9I	AATT	4 cut(s)	40, 46, 118, 799
SsiI	CCGC	3 cut(s)	525, 573, 725
SspMI	CTAG	6 cut(s)	83, 261, 402, 431, 644, 782
StyD4I	CCNGG	1 cut(s)	613
StyI	CCWWGG	1 cut(s)	345
TaaI	ACNGT	1 cut(s)	556
TaiI	ACGT	2 cut(s)	542, 681
TaqI	TCGA	1 cut(s)	534
TasI	AATT	4 cut(s)	40, 46, 118, 799
TatI	WGTACW	3 cut(s)	161, 636, 705
TauI	GCSGC	1 cut(s)	576
TfiI	GAWTC	1 cut(s)	194
Tru1I	TTAA	2 cut(s)	117, 134
Tru9I	TTAA	2 cut(s)	117, 134
TscAI	CASTG	3 cut(s)	333, 598, 768
TseFI	GTSAC	1 cut(s)	493
TseI	GCWGC	2 cut(s)	173, 785
Tsp45I	GTSAC	1 cut(s)	493
TspDTI	ATGAA	4 cut(s)	113, 207, 257, 669
TspRI	CASTG	3 cut(s)	333, 598, 768
VspI	ATTAAT	1 cut(s)	134
XapI	RAATTY	1 cut(s)	799
XbaI	TCTAGA	1 cut(s)	643
XceI	RCATGY	3 cut(s)	211, 256, 706
XspI	CTAG	6 cut(s)	83, 261, 402, 431, 644, 782
ZrmI	AGTACT	1 cut(s)	163
Zsp2I	ATGCAT	1 cut(s)	505

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.