Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010604

Physical Location & Seq

Genomic Coordinates Reverse (-)

38314151 .. 38317875

Gene Structure 3725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G457200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1056 bp

ATGGAGCAGTTCAAAGACCACCCTCGCCTGCCGAAACGGTACGACATAACGCTCAAACCGGACCTCAACTCCTGCAGTTTCGGCGGCTCCGTCGCTGTCCACCTCGACATCGTCTGCGATACCCTGTTCATCGTCCTCGACGCCGCCGACCTCTCCGTCGATGCCGCTTCCGTGTCTTTCGCTTCCTCCAAGGTACTTTTCAAGCCTTGGAAAGTTGAGACATTTGAAGAAGATGGGATTTTGGTTCTGGAGTTTGGGGAGACGCTGCCGATTGGTTCGGGAGTTTTGGGTATTGGGTTTGAAGGAATTTTGAATGACAAGATGAAGGGATTCTACAGAGGTGTGTTCTTTGAATTCTGGAAGAAAAATATGGCAGTTACGCAGTTTGCGCCGGTTGATGCCAGGCGGTGCTTTCCCTGCTGGGATGAACCTGCTTGGAAGGTTGCTCTGTCTAACAAACTCACTCTTTCCAACATGCCTATTGTAGAAGAAAAAGTGGATGGACATCTGAAGACAGTTTCATTTCAAGAATTACCAATCGTGTCTACATATTTGGCGGCCGTTGTTGTTGGGTTGTTTGATTTTGTTGAAGATCATACATCTGATGGGAAGTTTGCTTTGGACGTTGCTGTCAAGACTCTTGAATTTTACAAAGATTACTTTGCTGTGCCATACTCTTTGCCCAAATTGGATATGGGTTTAGTTACATACCAAGAAACCGCTTTGCTCAATGACGAACAGCACTCTGCAGCTGCGATCAAGCAATGGACACTTTTATGGCTGAACGAGGGATTTGCAACATGGGTGAGCTATTTAGCTACTGATAGCTTGTTCCCAGAGTCGAAAATGTGGGCAAAGTTTCTTGATGAAATTACTGGGGGTCTCAAGCTGGATGGGCTTGAAGGATCTCACCCCATTGAGGTGGTGATCAATCATGCTGCTGAGGTTGTTGAAATATTTGATGCAATAAGTTATAGAAAAGGAGGTTCTGTTATCCGGATGCTACAAAACTATCTTGGTGCTGAATGCTTCCAGGTTAGTCCTTTGGTTTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

352

Amino Acids

39.17

Weight (kDa)

4.78

Isoelectric Point (pI)

30.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010604)

Species	Orthologous Gene IDs
malus_domestica	MD08G1067100.v1.1 MD08G1067200.v1.1
prunus_persica	Prupe.1G457200_v2.0.a1 Prupe.1G457200_v2.0.a1
pyrus_communis	pycom08g05540 pycom08g05580 pycom15g05120
rosa_multiflora	Rmu_co7981604.1_g000001 Rmu_co8250275.1_g000001 Rmu_sc0032968.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072890
rosa_samantha	Rh5AG025300 Rh5AG025700 Rh5BG026800 Rh5CG028100 Rh5CG028200 Rh5CG028500 Rh5DG025400 Rh6DG505300 Rh6DG505400
rosa_wichuraiana	Rw5G002360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	155, 629
Acc36I	ACCTGC	1 cut(s)	439
AccI	GTMKAC	1 cut(s)	545
AccIII	TCCGGA	1 cut(s)	996
AciI	CCGC	6 cut(s)	84, 144, 165, 406, 557, 720
AclWI	GGATC	1 cut(s)	913
AcoI	YGGCCR	1 cut(s)	558
AcsI	RAATTY	3 cut(s)	306, 353, 644
AcuI	CTGAAG	1 cut(s)	530
AcyI	GRCGYC	1 cut(s)	141
AfaI	GTAC	2 cut(s)	41, 195
AfiI	CCNNNNNNNGG	1 cut(s)	919
AjnI	CCWGG	2 cut(s)	401, 1032
AjuI	GAANNNNNNNTTGG	4 cut(s)	182, 214, 602, 634
AluBI	AGCT	5 cut(s)	752, 810, 818, 828, 889
AluI	AGCT	5 cut(s)	752, 810, 818, 828, 889
Alw26I	GTCTC	3 cut(s)	212, 254, 887
AlwI	GGATC	1 cut(s)	913
Aor13HI	TCCGGA	1 cut(s)	996
AoxI	GGCC	1 cut(s)	558
ApeKI	GCWGC	4 cut(s)	265, 749, 752, 938
ApoI	RAATTY	3 cut(s)	306, 353, 644
Asp700I	GAANNNNTTC	1 cut(s)	329
AspLEI	GCGC	1 cut(s)	391
AspS9I	GGNCC	1 cut(s)	61
AsuHPI	GGTGA	3 cut(s)	817, 902, 937
AvaII	GGWCC	1 cut(s)	61
BarI	GAAGNNNNNNTAC	2 cut(s)	317, 349
BbsI	GAAGAC	1 cut(s)	518
BbvCI	CCTCAGC	1 cut(s)	942
BbvI	GCAGC	4 cut(s)	252, 739, 761, 925
BccI	CCATC	4 cut(s)	227, 494, 599, 887
BceAI	ACGGC	1 cut(s)	545
BcgI	CGANNNNNNTGC	2 cut(s)	776, 810
BciT130I	CCWGG	2 cut(s)	403, 1034
BclI	TGATCA	1 cut(s)	927
BcoDI	GTCTC	3 cut(s)	212, 254, 887
BfmI	CTRYAG	3 cut(s)	73, 334, 747
BfuAI	ACCTGC	1 cut(s)	439
BisI	GCNGC	8 cut(s)	85, 144, 165, 266, 558, 750, 753, 939
BlsI	GCNGC	8 cut(s)	86, 145, 166, 267, 559, 751, 754, 940
Bme1390I	CCNGG	2 cut(s)	403, 1034
Bme18I	GGWCC	1 cut(s)	61
BmgT120I	GGNCC	1 cut(s)	61
BmiI	GGNNCC	1 cut(s)	88
BmrFI	CCNGG	2 cut(s)	403, 1034
BmrI	ACTGGG	1 cut(s)	885
BmsI	GCATC	4 cut(s)	151, 388, 952, 990
BmuI	ACTGGG	1 cut(s)	885
BpiI	GAAGAC	1 cut(s)	518
BpmI	CTGGAG	1 cut(s)	269
Bpu10I	CCTNAGC	1 cut(s)	942
BpuEI	CTTGAG	1 cut(s)	869
BsaBI	GATNNNNATC	1 cut(s)	504
BsaHI	GRCGYC	1 cut(s)	141
BsaI	GGTCTC	1 cut(s)	887
BsaJI	CCNNGG	2 cut(s)	189, 206
BsaWI	WCCGGW	2 cut(s)	58, 996
BsaXI	ACNNNNNCTCC	4 cut(s)	53, 83, 975, 1005
Bsc4I	CCNNNNNNNGG	1 cut(s)	919
Bse118I	RCCGGY	1 cut(s)	391
Bse1I	ACTGG	1 cut(s)	880
Bse3DI	GCAATG	1 cut(s)	770
Bse8I	GATNNNNATC	1 cut(s)	504
BseAI	TCCGGA	1 cut(s)	996
BseBI	CCWGG	2 cut(s)	403, 1034
BseDI	CCNNGG	2 cut(s)	189, 206
BseGI	GGATG	4 cut(s)	430, 505, 898, 1005
BseJI	GATNNNNATC	1 cut(s)	504
BseLI	CCNNNNNNNGG	1 cut(s)	919
BseMI	GCAATG	1 cut(s)	770
BseMII	CTCAG	1 cut(s)	933
BseNI	ACTGG	1 cut(s)	880
BseX3I	CGGCCG	1 cut(s)	558
BseXI	GCAGC	4 cut(s)	252, 739, 761, 925
BseYI	CCCAGC	1 cut(s)	420
Bsh1285I	CGRYCG	1 cut(s)	561
BshFI	GGCC	1 cut(s)	560
BsiEI	CGRYCG	1 cut(s)	561
BsiSI	CCGG	3 cut(s)	59, 392, 997
BslI	CCNNNNNNNGG	1 cut(s)	919
BsmAI	GTCTC	3 cut(s)	212, 254, 887
BsmBI	CGTCTC	1 cut(s)	254
BsmI	GAATGC	1 cut(s)	1031
BsnI	GGCC	1 cut(s)	560
Bso31I	GGTCTC	1 cut(s)	887
Bsp13I	TCCGGA	1 cut(s)	996
Bsp143I	GATC	4 cut(s)	592, 756, 905, 927
BspACI	CCGC	6 cut(s)	84, 144, 165, 406, 557, 720
BspANI	GGCC	1 cut(s)	560
BspCNI	CTCAG	1 cut(s)	934
BspEI	TCCGGA	1 cut(s)	996
BspLI	GGNNCC	1 cut(s)	88
BspMAI	CTGCAG	2 cut(s)	77, 751
BspMI	ACCTGC	1 cut(s)	439
BspPI	GGATC	1 cut(s)	913
BspTNI	GGTCTC	1 cut(s)	887
BsrDI	GCAATG	1 cut(s)	770
BsrFI	RCCGGY	1 cut(s)	391
BsrI	ACTGG	1 cut(s)	880
BssAI	RCCGGY	1 cut(s)	391
BssECI	CCNNGG	2 cut(s)	189, 206
BssMI	GATC	4 cut(s)	592, 756, 905, 927
BssNI	GRCGYC	1 cut(s)	141
BssT1I	CCWWGG	2 cut(s)	189, 206
Bst2UI	CCWGG	2 cut(s)	403, 1034
Bst4CI	ACNGT	2 cut(s)	39, 517
BstACI	GRCGYC	1 cut(s)	141
BstC8I	GCNNGC	1 cut(s)	29
BstDEI	CTNAG	1 cut(s)	942
BstF5I	GGATG	4 cut(s)	430, 505, 898, 1005
BstHHI	GCGC	1 cut(s)	391
BstKTI	GATC	4 cut(s)	595, 759, 908, 930
BstMAI	GTCTC	3 cut(s)	212, 254, 887
BstMBI	GATC	4 cut(s)	592, 756, 905, 927
BstMCI	CGRYCG	1 cut(s)	561
BstMWI	GCNNNNNNNGC	4 cut(s)	81, 388, 417, 895
BstNI	CCWGG	2 cut(s)	403, 1034
BstNSI	RCATGY	1 cut(s)	478
BstSCI	CCNGG	2 cut(s)	401, 1032
BstSFI	CTRYAG	3 cut(s)	73, 334, 747
BstV1I	GCAGC	4 cut(s)	252, 739, 761, 925
BstV2I	GAAGAC	1 cut(s)	518
BstX2I	RGATCY	1 cut(s)	905
BstXI	CCANNNNNNTGG	1 cut(s)	922
BstYI	RGATCY	1 cut(s)	905
BstZI	CGGCCG	1 cut(s)	558
BsuRI	GGCC	1 cut(s)	560
BtsCI	GGATG	4 cut(s)	430, 505, 898, 1005
BveI	ACCTGC	1 cut(s)	439
Cac8I	GCNNGC	1 cut(s)	29
CfoI	GCGC	1 cut(s)	391
Cfr10I	RCCGGY	1 cut(s)	391
Cfr13I	GGNCC	1 cut(s)	61
CseI	GACGC	2 cut(s)	149, 271
Csp6I	GTAC	2 cut(s)	40, 194
CviAII	CATG	3 cut(s)	475, 801, 935
CviQI	GTAC	2 cut(s)	40, 194
DdeI	CTNAG	1 cut(s)	942
DpnI	GATC	4 cut(s)	594, 758, 907, 929
DpnII	GATC	4 cut(s)	592, 756, 905, 927
DrdI	GACNNNNNNGTC	2 cut(s)	155, 629
DseDI	GACNNNNNNGTC	2 cut(s)	155, 629
EaeI	YGGCCR	1 cut(s)	558
EagI	CGGCCG	1 cut(s)	558
EclXI	CGGCCG	1 cut(s)	558
Eco130I	CCWWGG	2 cut(s)	189, 206
Eco31I	GGTCTC	1 cut(s)	887
Eco47I	GGWCC	1 cut(s)	61
Eco52I	CGGCCG	1 cut(s)	558
Eco57I	CTGAAG	1 cut(s)	530
EcoRI	GAATTC	1 cut(s)	353
EcoRII	CCWGG	2 cut(s)	401, 1032
EcoT14I	CCWWGG	2 cut(s)	189, 206
ErhI	CCWWGG	2 cut(s)	189, 206
Esp3I	CGTCTC	1 cut(s)	254
FaeI	CATG	3 cut(s)	478, 804, 938
FatI	CATG	3 cut(s)	474, 800, 934
FbaI	TGATCA	1 cut(s)	927
FblI	GTMKAC	1 cut(s)	545
Fnu4HI	GCNGC	8 cut(s)	85, 144, 165, 266, 558, 750, 753, 939
FokI	GGATG	4 cut(s)	437, 512, 905, 1012
Fsp4HI	GCNGC	8 cut(s)	85, 144, 165, 266, 558, 750, 753, 939
GlaI	GCGC	1 cut(s)	390
GluI	GCNGC	8 cut(s)	85, 144, 165, 266, 558, 750, 753, 939
GsaI	CCCAGC	1 cut(s)	424
GsuI	CTGGAG	1 cut(s)	269
HaeIII	GGCC	1 cut(s)	560
HapII	CCGG	3 cut(s)	59, 392, 997
HgaI	GACGC	2 cut(s)	149, 271
HhaI	GCGC	1 cut(s)	391
Hin1I	GRCGYC	1 cut(s)	141
Hin1II	CATG	3 cut(s)	478, 804, 938
Hin6I	GCGC	1 cut(s)	389
HinP1I	GCGC	1 cut(s)	389
HinfI	GANTC	3 cut(s)	330, 637, 839
HpaII	CCGG	3 cut(s)	59, 392, 997
HphI	GGTGA	3 cut(s)	817, 902, 937
Hpy166II	GTNNAC	2 cut(s)	100, 546
Hpy188I	TCNGA	2 cut(s)	510, 604
Hpy188III	TCNNGA	8 cut(s)	248, 279, 358, 527, 634, 641, 863, 997
Hpy8I	GTNNAC	2 cut(s)	100, 546
Hpy99I	CGWCG	3 cut(s)	95, 143, 161
HpyAV	CCTTC	4 cut(s)	296, 319, 433, 896
HpyCH4III	ACNGT	2 cut(s)	39, 517
HpyCH4IV	ACGT	1 cut(s)	624
HpyCH4V	TGCA	4 cut(s)	75, 749, 797, 965
HpyF10VI	GCNNNNNNNGC	4 cut(s)	81, 388, 417, 895
HpyF3I	CTNAG	1 cut(s)	942
HpySE526I	ACGT	1 cut(s)	624
Hsp92I	GRCGYC	1 cut(s)	141
Hsp92II	CATG	3 cut(s)	478, 804, 938
HspAI	GCGC	1 cut(s)	389
Kpn2I	TCCGGA	1 cut(s)	996
Ksp22I	TGATCA	1 cut(s)	927
Kzo9I	GATC	4 cut(s)	592, 756, 905, 927
LmnI	GCTCC	2 cut(s)	4, 92
Lsp1109I	GCAGC	4 cut(s)	252, 739, 761, 925
LweI	GCATC	4 cut(s)	151, 388, 952, 990
MaeII	ACGT	1 cut(s)	624
MaeIII	GTNAC	2 cut(s)	376, 703
MalI	GATC	4 cut(s)	594, 758, 907, 929
MboI	GATC	4 cut(s)	592, 756, 905, 927
MboII	GAAGA	6 cut(s)	239, 242, 373, 500, 523, 602
MflI	RGATCY	1 cut(s)	905
MluCI	AATT	6 cut(s)	306, 353, 530, 644, 686, 870
MlyI	GAGTC	2 cut(s)	631, 848
MmeI	TCCRAC	1 cut(s)	495
MroI	TCCGGA	1 cut(s)	996
MroXI	GAANNNNTTC	1 cut(s)	329
MslI	CAYNNNNRTG	2 cut(s)	775, 920
MspA1I	CMGCKG	1 cut(s)	752
MspI	CCGG	3 cut(s)	59, 392, 997
MspR9I	CCNGG	2 cut(s)	403, 1034
Mva1269I	GAATGC	1 cut(s)	1031
MvaI	CCWGG	2 cut(s)	403, 1034
MwoI	GCNNNNNNNGC	4 cut(s)	81, 388, 417, 895
NdeII	GATC	4 cut(s)	592, 756, 905, 927
NlaIII	CATG	3 cut(s)	478, 804, 938
NlaIV	GGNNCC	1 cut(s)	88
NspI	RCATGY	1 cut(s)	478
PcsI	WCGNNNNNNNCGW	2 cut(s)	87, 144
PctI	GAATGC	1 cut(s)	1031
PdmI	GAANNNNTTC	1 cut(s)	329
PfeI	GAWTC	1 cut(s)	330
PflFI	GACNNNGTC	1 cut(s)	110
PkrI	GCNGC	8 cut(s)	86, 145, 166, 267, 559, 751, 754, 940
PleI	GAGTC	2 cut(s)	631, 847
PpsI	GAGTC	2 cut(s)	631, 847
Psp6I	CCWGG	2 cut(s)	401, 1032
PspFI	CCCAGC	1 cut(s)	420
PspGI	CCWGG	2 cut(s)	401, 1032
PspN4I	GGNNCC	1 cut(s)	88
PspPI	GGNCC	1 cut(s)	61
PstI	CTGCAG	2 cut(s)	77, 751
PsuI	RGATCY	1 cut(s)	905
PsyI	GACNNNGTC	1 cut(s)	110
PvuII	CAGCTG	1 cut(s)	752
RsaI	GTAC	2 cut(s)	41, 195
RsaNI	GTAC	2 cut(s)	40, 194
RseI	CAYNNNNRTG	2 cut(s)	775, 920
SatI	GCNGC	8 cut(s)	85, 144, 165, 266, 558, 750, 753, 939
Sau3AI	GATC	4 cut(s)	592, 756, 905, 927
Sau96I	GGNCC	1 cut(s)	61
SchI	GAGTC	2 cut(s)	631, 848
ScrFI	CCNGG	2 cut(s)	403, 1034
SfaNI	GCATC	4 cut(s)	151, 388, 952, 990
SfcI	CTRYAG	3 cut(s)	73, 334, 747
SinI	GGWCC	1 cut(s)	61
SmiMI	CAYNNNNRTG	2 cut(s)	775, 920
SmlI	CTYRAG	1 cut(s)	884
SmoI	CTYRAG	1 cut(s)	884
Sse9I	AATT	6 cut(s)	306, 353, 530, 644, 686, 870
SsiI	CCGC	6 cut(s)	84, 144, 165, 406, 557, 720
SspI	AATATT	1 cut(s)	957
StyD4I	CCNGG	2 cut(s)	401, 1032
StyI	CCWWGG	2 cut(s)	189, 206
TaaI	ACNGT	2 cut(s)	39, 517
TaiI	ACGT	1 cut(s)	627
TaqI	TCGA	4 cut(s)	105, 138, 159, 842
TasI	AATT	6 cut(s)	306, 353, 530, 644, 686, 870
TauI	GCSGC	4 cut(s)	87, 146, 167, 560
TfiI	GAWTC	1 cut(s)	330
TseI	GCWGC	4 cut(s)	265, 749, 752, 938
TspDTI	ATGAA	5 cut(s)	118, 338, 441, 510, 882
TspGWI	ACGGA	3 cut(s)	79, 145, 160
Tth111I	GACNNNGTC	1 cut(s)	110
VpaK11BI	GGWCC	1 cut(s)	61
XapI	RAATTY	3 cut(s)	306, 353, 644
XceI	RCATGY	1 cut(s)	478
XcmI	CCANNNNNNNNNTGG	1 cut(s)	691
XmiI	GTMKAC	1 cut(s)	545
XmnI	GAANNNNTTC	1 cut(s)	329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.