Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0010604

Physical Location & Seq

Genomic Coordinates Reverse (-)

65995674 .. 66001358

Gene Structure 5685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG505300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGTCACAGTTCAAAGGCCAATCTCGGCTTCCCAAATTCGCCGTGCCGAAACGCTACGACGTAAGGCTCAGACCCGACCTCGTCGCCTGCCAATTCGTCGGCTCCGTCGCCATCGACCTCGACATCGTCTCCGATACCCGCTTCATCGTCCTCAACGCCGCCGAGCTCTCCGTCAACCCCCTTGCCGTGTCTTTCACTCAACTAGACTCTTCCAAGGTTTTCAAGCCATCGAAAGTTGACGGGTTTGAAGATGATGGCATTTTGGTTATGGAGTTTGAGGAGACGATTCCAGTTGGGCTGGGAGTTTTGGCTATTGGGTTTCAAGGAATTTTGAATGACAAGATGAAGGGATTCTATAGAAGTACATATGAGCATAATGGGGAGAAGAAAAACATGGCTGTTACACAGTTTGAACCGGTTGATGCCAGGCGCTGCTTTCCGTGTTGGGATGAACCTGCTTGCAAGAGGTCACTGGCTGCATATGTAAAGAAACATGCTTACTCAAATGCAAAGACAGAAGACTTATGGGCTGCCCTTGAAGAGGGATCTGGTGAACCTGTGAACAAGCTGATGAATTCGTGGACGCAGCAGAAAGGCTACCCAGTTGTTTCTGTCGAAGTCAAAGATCAAAAATTGAAGTTTGATCAGACACAATTCTTGTCAAGTGGTTCCCAAGGCGAAGGAGAATGGATTGTGCCAATAACATTATGCTGTGGCTCGTATGATTTACGCAAGAGCTTCCTACTCAAAACTAAGTCTGAAACTCTTGACATAAAGGAATTTCTAGGTTGTTCAATAGCAGAGACTGAAAGTGGAAGCATATGCAATAAAAACAATACAGTATGCAGTTGGATAAAAATCAATGTAGATCAAGCTGGTTTTTACAGGGTGAAATATGATGAGAAACTTGCAGCTACACTAAGAAATGCTATACAGAACAAACACTTGTCTGCAACGGACAGATTTGGCATTTTGGATGATTCATATGCCCTTTCTATGGCTCGTCAGCTGTCTTTTGCTTCGTTGCTTACCTTGTTGGCTGCTTACAAAGAGGAACTTGACTATACAGTCCTGTCAAATTTGATTTCTATTAGTCAAAAGCTCGCAAGAATTGCAGCTGATGCAATACCCGAGCTACTTGATCTCATCAATCAGTTCTTTATTGGCCTTCTTCAGTACTCTGCAGAGAAGCTTGGTTGGCAGCCGAAACCCGGTGAGGGCCATTTAGATGCAATGTTGAGGGGAGAAGTTTTGACCACCCTTGCTTTATTTGGACATGACCTAACAATTAATGAAGCAAGCAGGCGTTTTCATGCCTACTTAGATGACAGAAATACGCCTCTCCTTCCTCCTGACATTAGAAAGGCAGCATATGTGGCTGTAATGCAAACAGTAACCCAATCAAACAGAGCAGGCTATGACTCTCTTCTTAGAGTTTATAGAGAGAGTGATCAAAGTGAGGAGAAAAACCGCATTTTAGGTTCATTAGCATCCTGTCCAGATCCAGACATTATACTGGAAGTTCTCAACTTTTTGTTGACTCCAGAGGTCCGCAACCAGGATGCTATTTTTGGACTTGCTGTTTGTATTAAAGGACGGGAAACAGCTTGGACTTGGCTGAAGGATAACTGGGAGAAAATCTCAAAGACCTGGGGTTCTGGATTTCTAATTACTCGCTTTGTCAGTGCAATTGTTTCACCGCATGCTTCATTTGAGAAGGTCGAGGAAGTAGAGGAGTTCTTCAAAGCCCATCCTAACCCTGCCATAACTAGAACCTTGAAGCAGAGCATGGAGCGAGTACAGATTAACGCCAAGTGGGTTCAGAGTGTTCAGGGTGAGAAAGATCTTCCCAAGGTTTTGAAGGAGTTGGCTTCCAGGAAATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0006810 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009628 GO:0009914 GO:0009926 GO:0009987 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0031090 GO:0031406 GO:0033218 GO:0033293 GO:0033554 GO:0034641 GO:0036094 GO:0036293 GO:0036294 GO:0042221 GO:0042277 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043177 GO:0043226 GO:0043227 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0070482 GO:0070887 GO:0071453 GO:0071456 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ERAP1_C Peptidase_M1

Protein Analysis

628

Amino Acids

70.56

Weight (kDa)

6.18

Isoelectric Point (pI)

33.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1_N	PF17900	15 - 162	1.6e-31	Peptidase M1 N-terminal domain
Peptidase_M1	PF01433	155 - 194	1.1e-06	Peptidase family M1 domain
ERAP1_C	PF11838	284 - 601	3e-84	ERAP1-like C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010604)

Species	Orthologous Gene IDs
malus_domestica	MD08G1067100.v1.1 MD08G1067200.v1.1
prunus_persica	Prupe.1G457200_v2.0.a1 Prupe.1G457200_v2.0.a1
pyrus_communis	pycom08g05540 pycom08g05580 pycom15g05120
rosa_multiflora	Rmu_co7981604.1_g000001 Rmu_co8250275.1_g000001 Rmu_sc0032968.1_g000001
rosa_roxburghii	Rroxscaffold_1G00072890
rosa_samantha	Rh5AG025300 Rh5AG025700 Rh5BG026800 Rh5CG028100 Rh5CG028200 Rh5CG028500 Rh5DG025400 Rh6DG505300 Rh6DG505400
rosa_wichuraiana	Rw5G002360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1067
Acc36I	ACCTGC	1 cut(s)	463
AciI	CCGC	5 cut(s)	139, 159, 1471, 1552, 1700
AclWI	GGATC	2 cut(s)	553, 1496
AcsI	RAATTY	5 cut(s)	35, 327, 574, 779, 1078
AcuI	CTGAAG	2 cut(s)	1157, 1640
AfaI	GTAC	3 cut(s)	364, 1178, 1800
AfiI	CCNNNNNNNGG	5 cut(s)	541, 997, 1211, 1217, 1558
AgeI	ACCGGT	1 cut(s)	415
AjnI	CCWGG	4 cut(s)	425, 1557, 1649, 1874
AjuI	GAANNNNNNNTTGG	2 cut(s)	12, 44
Alw21I	GWGCWC	1 cut(s)	168
Alw26I	GTCTC	3 cut(s)	133, 275, 797
AlwI	GGATC	2 cut(s)	553, 1496
AlwNI	CAGNNNCTG	2 cut(s)	432, 806
Ama87I	CYCGRG	1 cut(s)	1130
AoxI	GGCC	3 cut(s)	16, 1165, 1219
ApeKI	GCWGC	9 cut(s)	432, 476, 530, 586, 911, 1040, 1115, 1201, 1367
ApoI	RAATTY	5 cut(s)	35, 327, 574, 779, 1078
ArsI	GACNNNNNNTTYG	2 cut(s)	1566, 1598
AseI	ATTAAT	1 cut(s)	1290
AsiGI	ACCGGT	1 cut(s)	415
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	1 cut(s)	432
AspS9I	GGNCC	2 cut(s)	1219, 1549
AsuC2I	CCSGG	1 cut(s)	1212
AsuHPI	GGTGA	5 cut(s)	563, 901, 1226, 1689, 1847
AvaI	CYCGRG	1 cut(s)	1130
AvaII	GGWCC	1 cut(s)	1549
BanII	GRGCYC	1 cut(s)	168
BbsI	GAAGAC	1 cut(s)	525
Bbv12I	GWGCWC	1 cut(s)	168
BbvI	GCAGC	9 cut(s)	419, 463, 517, 598, 923, 1027, 1127, 1213, 1379
BccI	CCATC	4 cut(s)	119, 235, 248, 1758
BceAI	ACGGC	2 cut(s)	26, 170
BciT130I	CCWGG	4 cut(s)	427, 1559, 1651, 1876
BclI	TGATCA	2 cut(s)	643, 1450
BcnI	CCSGG	1 cut(s)	1212
BcoDI	GTCTC	3 cut(s)	133, 275, 797
BfaI	CTAG	4 cut(s)	203, 785, 1770, 1885
BfmI	CTRYAG	2 cut(s)	355, 1182
BfoI	RGCGCY	1 cut(s)	433
BfuAI	ACCTGC	1 cut(s)	463
BglII	AGATCT	1 cut(s)	1843
BmcAI	AGTACT	1 cut(s)	1178
Bme1390I	CCNGG	5 cut(s)	427, 1212, 1559, 1651, 1876
Bme18I	GGWCC	1 cut(s)	1549
BmeT110I	CYCGRG	1 cut(s)	1130
BmgT120I	GGNCC	2 cut(s)	1219, 1549
BmiI	GGNNCC	2 cut(s)	103, 670
BmrFI	CCNGG	5 cut(s)	427, 1212, 1559, 1651, 1876
BmrI	ACTGGG	2 cut(s)	596, 1639
BmsI	GCATC	5 cut(s)	412, 1111, 1219, 1499, 1552
BmuI	ACTGGG	2 cut(s)	596, 1639
BpiI	GAAGAC	1 cut(s)	525
BplI	GAGNNNNNCTC	2 cut(s)	1625, 1657
BpmI	CTGGAG	1 cut(s)	1527
BpuMI	CCSGG	1 cut(s)	1212
BsaBI	GATNNNNATC	1 cut(s)	857
BsaJI	CCNNGG	4 cut(s)	213, 673, 1650, 1851
BsaWI	WCCGGW	1 cut(s)	415
BsaXI	ACNNNNNCTCC	2 cut(s)	113, 143
Bsc4I	CCNNNNNNNGG	5 cut(s)	541, 997, 1211, 1217, 1558
Bse118I	RCCGGY	1 cut(s)	415
Bse1I	ACTGG	5 cut(s)	290, 477, 602, 1521, 1634
Bse3DI	GCAATG	1 cut(s)	1239
Bse8I	GATNNNNATC	1 cut(s)	857
BseBI	CCWGG	4 cut(s)	427, 1559, 1651, 1876
BseDI	CCNNGG	4 cut(s)	213, 673, 1650, 1851
BseGI	GGATG	5 cut(s)	454, 982, 1490, 1567, 1750
BseJI	GATNNNNATC	1 cut(s)	857
BseLI	CCNNNNNNNGG	5 cut(s)	541, 997, 1211, 1217, 1558
BseMI	GCAATG	1 cut(s)	1239
BseMII	CTCAG	1 cut(s)	82
BseNI	ACTGG	5 cut(s)	290, 477, 602, 1521, 1634
BseRI	GAGGAG	3 cut(s)	293, 1475, 1748
BseXI	GCAGC	9 cut(s)	419, 463, 517, 598, 923, 1027, 1127, 1213, 1379
BseYI	CCCAGC	1 cut(s)	298
BshFI	GGCC	3 cut(s)	18, 1167, 1221
BshTI	ACCGGT	1 cut(s)	415
BsiHKAI	GWGCWC	1 cut(s)	168
BsiHKCI	CYCGRG	1 cut(s)	1130
BsiSI	CCGG	2 cut(s)	416, 1212
BslI	CCNNNNNNNGG	5 cut(s)	541, 997, 1211, 1217, 1558
BsmAI	GTCTC	3 cut(s)	133, 275, 797
BsmBI	CGTCTC	2 cut(s)	133, 275
BsnI	GGCC	3 cut(s)	18, 1167, 1221
BsoBI	CYCGRG	1 cut(s)	1130
Bsp1286I	GDGCHC	1 cut(s)	168
Bsp143I	GATC	8 cut(s)	545, 625, 643, 868, 1141, 1450, 1501, 1843
BspACI	CCGC	5 cut(s)	139, 159, 1471, 1552, 1700
BspANI	GGCC	3 cut(s)	18, 1167, 1221
BspCNI	CTCAG	1 cut(s)	81
BspLI	GGNNCC	2 cut(s)	103, 670
BspMAI	CTGCAG	1 cut(s)	1186
BspMI	ACCTGC	1 cut(s)	463
BspPI	GGATC	2 cut(s)	553, 1496
BsrDI	GCAATG	1 cut(s)	1239
BsrFI	RCCGGY	1 cut(s)	415
BsrI	ACTGG	5 cut(s)	290, 477, 602, 1521, 1634
BssAI	RCCGGY	1 cut(s)	415
BssECI	CCNNGG	4 cut(s)	213, 673, 1650, 1851
BssMI	GATC	8 cut(s)	545, 625, 643, 868, 1141, 1450, 1501, 1843
BssT1I	CCWWGG	3 cut(s)	213, 673, 1851
Bst2UI	CCWGG	4 cut(s)	427, 1559, 1651, 1876
Bst4CI	ACNGT	5 cut(s)	9, 408, 841, 1069, 1393
Bst6I	CTCTTC	3 cut(s)	214, 534, 1431
BstAPI	GCANNNNNTGC	2 cut(s)	1112, 1121
BstC8I	GCNNGC	7 cut(s)	88, 460, 1104, 1300, 1304, 1414, 1704
BstDEI	CTNAG	5 cut(s)	68, 753, 920, 1321, 1430
BstENI	CCTNNNNNAGG	1 cut(s)	539
BstF5I	GGATG	5 cut(s)	454, 982, 1490, 1567, 1750
BstH2I	RGCGCY	1 cut(s)	433
BstHHI	GCGC	1 cut(s)	432
BstKTI	GATC	8 cut(s)	548, 628, 646, 871, 1144, 1453, 1504, 1846
BstMAI	GTCTC	3 cut(s)	133, 275, 797
BstMBI	GATC	8 cut(s)	545, 625, 643, 868, 1141, 1450, 1501, 1843
BstMWI	GCNNNNNNNGC	4 cut(s)	1112, 1121, 1198, 1376
BstNI	CCWGG	4 cut(s)	427, 1559, 1651, 1876
BstNSI	RCATGY	2 cut(s)	497, 1706
BstSCI	CCNGG	5 cut(s)	425, 1210, 1557, 1649, 1874
BstSFI	CTRYAG	2 cut(s)	355, 1182
BstV1I	GCAGC	9 cut(s)	419, 463, 517, 598, 923, 1027, 1127, 1213, 1379
BstV2I	GAAGAC	1 cut(s)	525
BstX2I	RGATCY	3 cut(s)	545, 1501, 1843
BstYI	RGATCY	3 cut(s)	545, 1501, 1843
BsuRI	GGCC	3 cut(s)	18, 1167, 1221
BtsCI	GGATG	5 cut(s)	454, 982, 1490, 1567, 1750
BtsIMutI	CAGTG	2 cut(s)	470, 1690
BveI	ACCTGC	1 cut(s)	463
Cac8I	GCNNGC	7 cut(s)	88, 460, 1104, 1300, 1304, 1414, 1704
CaiI	CAGNNNCTG	2 cut(s)	432, 806
CfoI	GCGC	1 cut(s)	432
Cfr10I	RCCGGY	1 cut(s)	415
Cfr13I	GGNCC	2 cut(s)	1219, 1549
CseI	GACGC	1 cut(s)	592
Csp6I	GTAC	3 cut(s)	363, 1177, 1799
CspAI	ACCGGT	1 cut(s)	415
CviAII	CATG	6 cut(s)	394, 494, 1277, 1313, 1703, 1789
CviQI	GTAC	3 cut(s)	363, 1177, 1799
DdeI	CTNAG	5 cut(s)	68, 753, 920, 1321, 1430
DpnI	GATC	8 cut(s)	547, 627, 645, 870, 1143, 1452, 1503, 1845
DpnII	GATC	8 cut(s)	545, 625, 643, 868, 1141, 1450, 1501, 1843
DrdI	GACNNNNNNGTC	1 cut(s)	1067
DseDI	GACNNNNNNGTC	1 cut(s)	1067
Eam1104I	CTCTTC	3 cut(s)	214, 534, 1431
EarI	CTCTTC	3 cut(s)	214, 534, 1431
Ecl136II	GAGCTC	1 cut(s)	166
Eco130I	CCWWGG	3 cut(s)	213, 673, 1851
Eco24I	GRGCYC	1 cut(s)	168
Eco47I	GGWCC	1 cut(s)	1549
Eco53kI	GAGCTC	1 cut(s)	166
Eco57I	CTGAAG	2 cut(s)	1157, 1640
Eco88I	CYCGRG	1 cut(s)	1130
EcoICRI	GAGCTC	1 cut(s)	166
EcoNI	CCTNNNNNAGG	1 cut(s)	539
EcoRI	GAATTC	1 cut(s)	574
EcoRII	CCWGG	4 cut(s)	425, 1557, 1649, 1874
EcoT14I	CCWWGG	3 cut(s)	213, 673, 1851
EcoT38I	GRGCYC	1 cut(s)	168
ErhI	CCWWGG	3 cut(s)	213, 673, 1851
Esp3I	CGTCTC	2 cut(s)	133, 275
FaeI	CATG	6 cut(s)	397, 497, 1280, 1316, 1706, 1792
FalI	AAGNNNNNCTT	2 cut(s)	1041, 1073
FatI	CATG	6 cut(s)	393, 493, 1276, 1312, 1702, 1788
FauI	CCCGC	1 cut(s)	146
FauNDI	CATATG	5 cut(s)	367, 481, 821, 985, 1372
FbaI	TGATCA	2 cut(s)	643, 1450
FokI	GGATG	5 cut(s)	461, 989, 1477, 1574, 1737
FriOI	GRGCYC	1 cut(s)	168
FspBI	CTAG	4 cut(s)	203, 785, 1770, 1885
GlaI	GCGC	1 cut(s)	431
GsaI	CCCAGC	1 cut(s)	302
GsuI	CTGGAG	1 cut(s)	1527
HaeII	RGCGCY	1 cut(s)	433
HaeIII	GGCC	3 cut(s)	18, 1167, 1221
HapII	CCGG	2 cut(s)	416, 1212
HgaI	GACGC	1 cut(s)	592
HhaI	GCGC	1 cut(s)	432
Hin1II	CATG	6 cut(s)	397, 497, 1280, 1316, 1706, 1792
Hin6I	GCGC	1 cut(s)	430
HinP1I	GCGC	1 cut(s)	430
HincII	GTYRAC	3 cut(s)	175, 238, 1539
HindII	GTYRAC	3 cut(s)	175, 238, 1539
HindIII	AAGCTT	1 cut(s)	1190
HinfI	GANTC	6 cut(s)	206, 286, 351, 980, 1421, 1540
HpaII	CCGG	2 cut(s)	416, 1212
HphI	GGTGA	5 cut(s)	563, 901, 1226, 1689, 1847
Hpy166II	GTNNAC	6 cut(s)	175, 238, 554, 562, 582, 1539
Hpy188I	TCNGA	5 cut(s)	71, 133, 648, 760, 1824
Hpy188III	TCNNGA	6 cut(s)	767, 1352, 1499, 1505, 1544, 1659
Hpy8I	GTNNAC	6 cut(s)	175, 238, 554, 562, 582, 1539
Hpy99I	CGWCG	4 cut(s)	62, 86, 101, 110
HpyAV	CCTTC	7 cut(s)	340, 674, 1178, 1355, 1615, 1711, 1855
HpyCH4III	ACNGT	5 cut(s)	9, 408, 841, 1069, 1393
HpyCH4IV	ACGT	1 cut(s)	60
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1112, 1121, 1198, 1376
HpyF3I	CTNAG	5 cut(s)	68, 753, 920, 1321, 1430
HpySE526I	ACGT	1 cut(s)	60
Hsp92II	CATG	6 cut(s)	397, 497, 1280, 1316, 1706, 1792
HspAI	GCGC	1 cut(s)	430
Ksp22I	TGATCA	2 cut(s)	643, 1450
Kzo9I	GATC	8 cut(s)	545, 625, 643, 868, 1141, 1450, 1501, 1843
LmnI	GCTCC	2 cut(s)	107, 1792
Lsp1109I	GCAGC	9 cut(s)	419, 463, 517, 598, 923, 1027, 1127, 1213, 1379
LweI	GCATC	5 cut(s)	412, 1111, 1219, 1499, 1552
MaeI	CTAG	4 cut(s)	203, 785, 1770, 1885
MaeII	ACGT	1 cut(s)	60
MaeIII	GTNAC	4 cut(s)	3, 400, 468, 1393
MalI	GATC	8 cut(s)	547, 627, 645, 870, 1143, 1452, 1503, 1845
MboI	GATC	8 cut(s)	545, 625, 643, 868, 1141, 1450, 1501, 1843
MboII	GAAGA	9 cut(s)	201, 260, 397, 530, 551, 1163, 1418, 1732, 1838
MfeI	CAATTG	1 cut(s)	1689
MflI	RGATCY	3 cut(s)	545, 1501, 1843
MhlI	GDGCHC	1 cut(s)	168
MlyI	GAGTC	3 cut(s)	200, 1415, 1534
MmeI	TCCRAC	1 cut(s)	830
MroXI	GAANNNNTTC	1 cut(s)	350
MseI	TTAA	3 cut(s)	1290, 1590, 1806
MslI	CAYNNNNRTG	1 cut(s)	1227
MspA1I	CMGCKG	2 cut(s)	1009, 1118
MspI	CCGG	2 cut(s)	416, 1212
MspR9I	CCNGG	5 cut(s)	427, 1212, 1559, 1651, 1876
MunI	CAATTG	1 cut(s)	1689
MvaI	CCWGG	4 cut(s)	427, 1559, 1651, 1876
MwoI	GCNNNNNNNGC	4 cut(s)	1112, 1121, 1198, 1376
NciI	CCSGG	1 cut(s)	1212
NdeI	CATATG	5 cut(s)	367, 481, 821, 985, 1372
NdeII	GATC	8 cut(s)	545, 625, 643, 868, 1141, 1450, 1501, 1843
NlaIII	CATG	6 cut(s)	397, 497, 1280, 1316, 1706, 1792
NlaIV	GGNNCC	2 cut(s)	103, 670
NmeAIII	GCCGAG	2 cut(s)	4, 187
NmuCI	GTSAC	2 cut(s)	3, 468
NspI	RCATGY	2 cut(s)	497, 1706
PaeI	GCATGC	1 cut(s)	1706
PcsI	WCGNNNNNNNCGW	1 cut(s)	102
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	3 cut(s)	286, 351, 980
PflFI	GACNNNGTC	2 cut(s)	80, 125
PfoI	TCCNGGA	1 cut(s)	1874
PinAI	ACCGGT	1 cut(s)	415
PleI	GAGTC	3 cut(s)	200, 1415, 1534
PpsI	GAGTC	3 cut(s)	200, 1415, 1534
PshBI	ATTAAT	1 cut(s)	1290
Psp124BI	GAGCTC	1 cut(s)	168
Psp6I	CCWGG	4 cut(s)	425, 1557, 1649, 1874
PspFI	CCCAGC	1 cut(s)	298
PspGI	CCWGG	4 cut(s)	425, 1557, 1649, 1874
PspN4I	GGNNCC	2 cut(s)	103, 670
PspPI	GGNCC	2 cut(s)	1219, 1549
PstI	CTGCAG	1 cut(s)	1186
PstNI	CAGNNNCTG	2 cut(s)	432, 806
PsuI	RGATCY	3 cut(s)	545, 1501, 1843
PsyI	GACNNNGTC	2 cut(s)	80, 125
PvuII	CAGCTG	2 cut(s)	1009, 1118
RsaI	GTAC	3 cut(s)	364, 1178, 1800
RsaNI	GTAC	3 cut(s)	363, 1177, 1799
RseI	CAYNNNNRTG	1 cut(s)	1227
SacI	GAGCTC	1 cut(s)	168
SaqAI	TTAA	3 cut(s)	1290, 1590, 1806
Sau3AI	GATC	8 cut(s)	545, 625, 643, 868, 1141, 1450, 1501, 1843
Sau96I	GGNCC	2 cut(s)	1219, 1549
ScaI	AGTACT	1 cut(s)	1178
SchI	GAGTC	3 cut(s)	200, 1415, 1534
ScrFI	CCNGG	5 cut(s)	427, 1212, 1559, 1651, 1876
SduI	GDGCHC	1 cut(s)	168
SfaNI	GCATC	5 cut(s)	412, 1111, 1219, 1499, 1552
SfcI	CTRYAG	2 cut(s)	355, 1182
SinI	GGWCC	1 cut(s)	1549
SmiMI	CAYNNNNRTG	1 cut(s)	1227
SphI	GCATGC	1 cut(s)	1706
SsiI	CCGC	5 cut(s)	139, 159, 1471, 1552, 1700
SspMI	CTAG	4 cut(s)	203, 785, 1770, 1885
SstI	GAGCTC	1 cut(s)	168
StyD4I	CCNGG	5 cut(s)	425, 1210, 1557, 1649, 1874
StyI	CCWWGG	3 cut(s)	213, 673, 1851
TaaI	ACNGT	5 cut(s)	9, 408, 841, 1069, 1393
TaiI	ACGT	1 cut(s)	63
TaqI	TCGA	5 cut(s)	114, 120, 230, 615, 1722
TatI	WGTACW	3 cut(s)	362, 1176, 1798
TauI	GCSGC	1 cut(s)	161
TfiI	GAWTC	3 cut(s)	286, 351, 980
Tru1I	TTAA	3 cut(s)	1290, 1590, 1806
Tru9I	TTAA	3 cut(s)	1290, 1590, 1806
TscAI	CASTG	2 cut(s)	477, 1690
TseFI	GTSAC	2 cut(s)	3, 468
TseI	GCWGC	9 cut(s)	432, 476, 530, 586, 911, 1040, 1115, 1201, 1367
Tsp45I	GTSAC	2 cut(s)	3, 468
TspDTI	ATGAA	9 cut(s)	133, 359, 465, 587, 972, 1301, 1308, 1473, 1698
TspGWI	ACGGA	4 cut(s)	94, 160, 429, 971
TspRI	CASTG	2 cut(s)	477, 1690
Tth111I	GACNNNGTC	2 cut(s)	80, 125
VpaK11BI	GGWCC	1 cut(s)	1549
VspI	ATTAAT	1 cut(s)	1290
XagI	CCTNNNNNAGG	1 cut(s)	539
XapI	RAATTY	5 cut(s)	35, 327, 574, 779, 1078
XceI	RCATGY	2 cut(s)	497, 1706
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	4 cut(s)	203, 785, 1770, 1885
ZrmI	AGTACT	1 cut(s)	1178

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.