transcriptional co-repressor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g04170 |
| malus_domestica | MD15G1103400.v1.1 MD15G1117000.v1.1 |
| prunus_persica | Prupe.1G470800_v2.0.a1 |
| pyrus_communis | pycom08g11740 pycom15g09430 pycom15g10540 |
| rosa_chinensis | RchiOBHm_Chr2g0089711 RchiOBHm_Chr5g0080001 |
| rosa_multiflora | Rmu_sc0000008.1_g000005 Rmu_sc0000665.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00029520 |
| rosa_rugosa | Rorug05G0201800 |
| rosa_samantha | Rh1AG211600 Rh1BG178000 Rh1CG195900 Rh2CG048700 Rh2DG048100 Rh3CG164100 Rh3CG352800 Rh5DG080700 |
| rosa_wichuraiana | Rw1G017870 Rw2G004240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1088 |
| AciI | CCGC | 2 cut(s) | 90, 851 |
| AclWI | GGATC | 4 cut(s) | 366, 941, 954, 1015 |
| AcoI | YGGCCR | 2 cut(s) | 117, 538 |
| AcsI | RAATTY | 2 cut(s) | 430, 1058 |
| AcuI | CTGAAG | 1 cut(s) | 135 |
| AfaI | GTAC | 3 cut(s) | 462, 566, 673 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 272, 830 |
| AgsI | TTSAA | 6 cut(s) | 216, 430, 599, 808, 821, 1249 |
| AjiI | CACGTC | 1 cut(s) | 650 |
| AjnI | CCWGG | 2 cut(s) | 45, 655 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1075, 1107 |
| AluBI | AGCT | 8 cut(s) | 18, 188, 279, 498, 611, 792, 1044, 1252 |
| AluI | AGCT | 8 cut(s) | 18, 188, 279, 498, 611, 792, 1044, 1252 |
| Alw26I | GTCTC | 2 cut(s) | 656, 878 |
| AlwI | GGATC | 4 cut(s) | 366, 941, 954, 1015 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 158 |
| Ama87I | CYCGRG | 1 cut(s) | 199 |
| AoxI | GGCC | 4 cut(s) | 117, 154, 191, 538 |
| ApeKI | GCWGC | 7 cut(s) | 136, 789, 792, 845, 848, 1044, 1096 |
| ApoI | RAATTY | 2 cut(s) | 430, 1058 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1029 |
| AspS9I | GGNCC | 2 cut(s) | 155, 191 |
| AsuC2I | CCSGG | 2 cut(s) | 94, 121 |
| AsuHPI | GGTGA | 2 cut(s) | 324, 1028 |
| AsuII | TTCGAA | 1 cut(s) | 108 |
| AvaI | CYCGRG | 1 cut(s) | 199 |
| BalI | TGGCCA | 1 cut(s) | 540 |
| BamHI | GGATCC | 1 cut(s) | 946 |
| BbvI | GCAGC | 7 cut(s) | 148, 779, 801, 832, 860, 1031, 1083 |
| BccI | CCATC | 8 cut(s) | 305, 343, 368, 509, 749, 958, 1086, 1169 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 947, 981 |
| BciT130I | CCWGG | 2 cut(s) | 47, 657 |
| BclI | TGATCA | 1 cut(s) | 615 |
| BcnI | CCSGG | 2 cut(s) | 94, 121 |
| BcoDI | GTCTC | 2 cut(s) | 656, 878 |
| BfaI | CTAG | 4 cut(s) | 27, 495, 531, 1230 |
| BfmI | CTRYAG | 2 cut(s) | 237, 846 |
| BisI | GCNGC | 8 cut(s) | 137, 790, 793, 846, 849, 852, 1045, 1097 |
| BlsI | GCNGC | 8 cut(s) | 138, 791, 794, 847, 850, 853, 1046, 1098 |
| Bme1390I | CCNGG | 4 cut(s) | 47, 94, 121, 657 |
| BmeT110I | CYCGRG | 1 cut(s) | 199 |
| BmgBI | CACGTC | 1 cut(s) | 650 |
| BmgT120I | GGNCC | 2 cut(s) | 155, 191 |
| BmiI | GGNNCC | 1 cut(s) | 948 |
| BmrFI | CCNGG | 4 cut(s) | 47, 94, 121, 657 |
| BmrI | ACTGGG | 1 cut(s) | 327 |
| BmsI | GCATC | 2 cut(s) | 977, 1177 |
| BmuI | ACTGGG | 1 cut(s) | 327 |
| BpmI | CTGGAG | 1 cut(s) | 793 |
| Bpu14I | TTCGAA | 1 cut(s) | 108 |
| BpuEI | CTTGAG | 1 cut(s) | 781 |
| BpuMI | CCSGG | 2 cut(s) | 94, 121 |
| Bsa29I | ATCGAT | 1 cut(s) | 361 |
| BsaBI | GATNNNNATC | 1 cut(s) | 357 |
| BsaJI | CCNNGG | 3 cut(s) | 655, 829, 1122 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 217, 247, 307, 337 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 272, 830 |
| Bse118I | RCCGGY | 1 cut(s) | 115 |
| Bse1I | ACTGG | 4 cut(s) | 140, 322, 776, 879 |
| Bse3DI | GCAATG | 1 cut(s) | 1054 |
| Bse8I | GATNNNNATC | 1 cut(s) | 357 |
| BseBI | CCWGG | 2 cut(s) | 47, 657 |
| BseCI | ATCGAT | 1 cut(s) | 361 |
| BseDI | CCNNGG | 3 cut(s) | 655, 829, 1122 |
| BseGI | GGATG | 5 cut(s) | 379, 520, 760, 883, 1078 |
| BseJI | GATNNNNATC | 1 cut(s) | 357 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 272, 830 |
| BseMI | GCAATG | 1 cut(s) | 1054 |
| BseNI | ACTGG | 4 cut(s) | 140, 322, 776, 879 |
| BseRI | GAGGAG | 1 cut(s) | 271 |
| BseX3I | CGGCCG | 1 cut(s) | 117 |
| BseXI | GCAGC | 7 cut(s) | 148, 779, 801, 832, 860, 1031, 1083 |
| BseYI | CCCAGC | 2 cut(s) | 188, 942 |
| Bsh1285I | CGRYCG | 1 cut(s) | 120 |
| BshFI | GGCC | 4 cut(s) | 119, 156, 193, 540 |
| BshVI | ATCGAT | 1 cut(s) | 361 |
| BsiEI | CGRYCG | 1 cut(s) | 120 |
| BsiHKCI | CYCGRG | 1 cut(s) | 199 |
| BsiSI | CCGG | 3 cut(s) | 94, 116, 120 |
| BslFI | GGGAC | 3 cut(s) | 334, 412, 696 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 272, 830 |
| BsmAI | GTCTC | 2 cut(s) | 656, 878 |
| BsmBI | CGTCTC | 1 cut(s) | 656 |
| BsmFI | GGGAC | 3 cut(s) | 334, 412, 696 |
| BsmI | GAATGC | 1 cut(s) | 901 |
| BsnI | GGCC | 4 cut(s) | 119, 156, 193, 540 |
| BsoBI | CYCGRG | 1 cut(s) | 199 |
| Bsp119I | TTCGAA | 1 cut(s) | 108 |
| Bsp143I | GATC | 4 cut(s) | 358, 615, 946, 1007 |
| Bsp19I | CCATGG | 1 cut(s) | 829 |
| BspACI | CCGC | 2 cut(s) | 90, 851 |
| BspANI | GGCC | 4 cut(s) | 119, 156, 193, 540 |
| BspDI | ATCGAT | 1 cut(s) | 361 |
| BspHI | TCATGA | 2 cut(s) | 1033, 1234 |
| BspLI | GGNNCC | 1 cut(s) | 948 |
| BspMAI | CTGCAG | 2 cut(s) | 241, 850 |
| BspPI | GGATC | 4 cut(s) | 366, 941, 954, 1015 |
| BspT104I | TTCGAA | 1 cut(s) | 108 |
| BsrDI | GCAATG | 1 cut(s) | 1054 |
| BsrFI | RCCGGY | 1 cut(s) | 115 |
| BsrI | ACTGG | 4 cut(s) | 140, 322, 776, 879 |
| BssAI | RCCGGY | 1 cut(s) | 115 |
| BssECI | CCNNGG | 3 cut(s) | 655, 829, 1122 |
| BssMI | GATC | 4 cut(s) | 358, 615, 946, 1007 |
| BssNAI | GTATAC | 1 cut(s) | 1089 |
| BssT1I | CCWWGG | 2 cut(s) | 829, 1122 |
| Bst1107I | GTATAC | 1 cut(s) | 1089 |
| Bst2UI | CCWGG | 2 cut(s) | 47, 657 |
| Bst4CI | ACNGT | 1 cut(s) | 1207 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 860 |
| BstBI | TTCGAA | 1 cut(s) | 108 |
| BstC8I | GCNNGC | 3 cut(s) | 258, 478, 644 |
| BstDEI | CTNAG | 1 cut(s) | 921 |
| BstDSI | CCRYGG | 1 cut(s) | 829 |
| BstF5I | GGATG | 5 cut(s) | 379, 520, 760, 883, 1078 |
| BstKTI | GATC | 4 cut(s) | 361, 618, 949, 1010 |
| BstMAI | GTCTC | 2 cut(s) | 656, 878 |
| BstMBI | GATC | 4 cut(s) | 358, 615, 946, 1007 |
| BstMCI | CGRYCG | 1 cut(s) | 120 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 185, 262, 312, 851, 860, 922 |
| BstNI | CCWGG | 2 cut(s) | 47, 657 |
| BstNSI | RCATGY | 1 cut(s) | 646 |
| BstSCI | CCNGG | 4 cut(s) | 45, 92, 119, 655 |
| BstSFI | CTRYAG | 2 cut(s) | 237, 846 |
| BstV1I | GCAGC | 7 cut(s) | 148, 779, 801, 832, 860, 1031, 1083 |
| BstX2I | RGATCY | 1 cut(s) | 946 |
| BstYI | RGATCY | 1 cut(s) | 946 |
| BstZ17I | GTATAC | 1 cut(s) | 1089 |
| BstZI | CGGCCG | 1 cut(s) | 117 |
| Bsu15I | ATCGAT | 1 cut(s) | 361 |
| BsuRI | GGCC | 4 cut(s) | 119, 156, 193, 540 |
| BsuTUI | ATCGAT | 1 cut(s) | 361 |
| BtgI | CCRYGG | 1 cut(s) | 829 |
| BtrI | CACGTC | 1 cut(s) | 650 |
| BtsCI | GGATG | 5 cut(s) | 379, 520, 760, 883, 1078 |
| BtsIMutI | CAGTG | 4 cut(s) | 147, 315, 618, 982 |
| Cac8I | GCNNGC | 3 cut(s) | 258, 478, 644 |
| CaiI | CAGNNNCTG | 1 cut(s) | 158 |
| CciI | TCATGA | 2 cut(s) | 1033, 1234 |
| Cfr10I | RCCGGY | 1 cut(s) | 115 |
| Cfr13I | GGNCC | 2 cut(s) | 155, 191 |
| ClaI | ATCGAT | 1 cut(s) | 361 |
| Csp6I | GTAC | 3 cut(s) | 461, 565, 672 |
| CviAII | CATG | 9 cut(s) | 413, 542, 643, 830, 1034, 1068, 1138, 1172, 1235 |
| CviQI | GTAC | 3 cut(s) | 461, 565, 672 |
| DdeI | CTNAG | 1 cut(s) | 921 |
| DpnI | GATC | 4 cut(s) | 360, 617, 948, 1009 |
| DpnII | GATC | 4 cut(s) | 358, 615, 946, 1007 |
| DraI | TTTAAA | 1 cut(s) | 70 |
| EaeI | YGGCCR | 2 cut(s) | 117, 538 |
| EagI | CGGCCG | 1 cut(s) | 117 |
| EclXI | CGGCCG | 1 cut(s) | 117 |
| Eco130I | CCWWGG | 2 cut(s) | 829, 1122 |
| Eco52I | CGGCCG | 1 cut(s) | 117 |
| Eco57I | CTGAAG | 1 cut(s) | 135 |
| Eco88I | CYCGRG | 1 cut(s) | 199 |
| EcoO109I | RGGNCCY | 1 cut(s) | 155 |
| EcoRII | CCWGG | 2 cut(s) | 45, 655 |
| EcoT14I | CCWWGG | 2 cut(s) | 829, 1122 |
| ErhI | CCWWGG | 2 cut(s) | 829, 1122 |
| Esp3I | CGTCTC | 1 cut(s) | 656 |
| FaeI | CATG | 9 cut(s) | 416, 545, 646, 833, 1037, 1071, 1141, 1175, 1238 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 717, 749 |
| FaqI | GGGAC | 3 cut(s) | 334, 412, 696 |
| FatI | CATG | 9 cut(s) | 412, 541, 642, 829, 1033, 1067, 1137, 1171, 1234 |
| FbaI | TGATCA | 1 cut(s) | 615 |
| FblI | GTMKAC | 1 cut(s) | 1088 |
| Fnu4HI | GCNGC | 8 cut(s) | 137, 790, 793, 846, 849, 852, 1045, 1097 |
| FokI | GGATG | 5 cut(s) | 386, 527, 767, 890, 1065 |
| Fsp4HI | GCNGC | 8 cut(s) | 137, 790, 793, 846, 849, 852, 1045, 1097 |
| FspBI | CTAG | 4 cut(s) | 27, 495, 531, 1230 |
| GluI | GCNGC | 8 cut(s) | 137, 790, 793, 846, 849, 852, 1045, 1097 |
| GsaI | CCCAGC | 2 cut(s) | 192, 946 |
| GsuI | CTGGAG | 1 cut(s) | 793 |
| HaeIII | GGCC | 4 cut(s) | 119, 156, 193, 540 |
| HapII | CCGG | 3 cut(s) | 94, 116, 120 |
| Hin1II | CATG | 9 cut(s) | 416, 545, 646, 833, 1037, 1071, 1141, 1175, 1238 |
| HincII | GTYRAC | 1 cut(s) | 1203 |
| HindII | GTYRAC | 1 cut(s) | 1203 |
| HinfI | GANTC | 4 cut(s) | 7, 322, 749, 983 |
| HpaII | CCGG | 3 cut(s) | 94, 116, 120 |
| HphI | GGTGA | 2 cut(s) | 324, 1028 |
| Hpy166II | GTNNAC | 5 cut(s) | 447, 463, 567, 1089, 1203 |
| Hpy188I | TCNGA | 6 cut(s) | 294, 310, 514, 754, 762, 1007 |
| Hpy188III | TCNNGA | 8 cut(s) | 383, 397, 808, 883, 1011, 1034, 1235, 1255 |
| Hpy8I | GTNNAC | 5 cut(s) | 447, 463, 567, 1089, 1203 |
| HpyAV | CCTTC | 2 cut(s) | 204, 222 |
| HpyCH4III | ACNGT | 1 cut(s) | 1207 |
| HpyCH4IV | ACGT | 2 cut(s) | 649, 1085 |
| HpyCH4V | TGCA | 4 cut(s) | 239, 848, 968, 1047 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 185, 262, 312, 851, 860, 922 |
| HpyF3I | CTNAG | 1 cut(s) | 921 |
| HpySE526I | ACGT | 2 cut(s) | 649, 1085 |
| Hsp92II | CATG | 9 cut(s) | 416, 545, 646, 833, 1037, 1071, 1141, 1175, 1238 |
| Ksp22I | TGATCA | 1 cut(s) | 615 |
| Kzo9I | GATC | 4 cut(s) | 358, 615, 946, 1007 |
| LmnI | GCTCC | 2 cut(s) | 284, 746 |
| Lsp1109I | GCAGC | 7 cut(s) | 148, 779, 801, 832, 860, 1031, 1083 |
| LweI | GCATC | 2 cut(s) | 977, 1177 |
| MaeI | CTAG | 4 cut(s) | 27, 495, 531, 1230 |
| MaeII | ACGT | 2 cut(s) | 649, 1085 |
| MaeIII | GTNAC | 3 cut(s) | 490, 500, 1207 |
| MalI | GATC | 4 cut(s) | 360, 617, 948, 1009 |
| MboI | GATC | 4 cut(s) | 358, 615, 946, 1007 |
| MboII | GAAGA | 3 cut(s) | 141, 611, 846 |
| MflI | RGATCY | 1 cut(s) | 946 |
| MlsI | TGGCCA | 1 cut(s) | 540 |
| MluCI | AATT | 4 cut(s) | 74, 424, 430, 1058 |
| MluNI | TGGCCA | 1 cut(s) | 540 |
| MlyI | GAGTC | 3 cut(s) | 316, 743, 977 |
| MmeI | TCCRAC | 1 cut(s) | 1106 |
| MnlI | CCTC | 8 cut(s) | 31, 43, 232, 292, 300, 364, 973, 1007 |
| Mox20I | TGGCCA | 1 cut(s) | 540 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1029 |
| MscI | TGGCCA | 1 cut(s) | 540 |
| MseI | TTAA | 5 cut(s) | 69, 423, 471, 578, 780 |
| MslI | CAYNNNNRTG | 2 cut(s) | 417, 1068 |
| Msp20I | TGGCCA | 1 cut(s) | 540 |
| MspA1I | CMGCKG | 3 cut(s) | 188, 792, 851 |
| MspI | CCGG | 3 cut(s) | 94, 116, 120 |
| MspR9I | CCNGG | 4 cut(s) | 47, 94, 121, 657 |
| Mva1269I | GAATGC | 1 cut(s) | 901 |
| MvaI | CCWGG | 2 cut(s) | 47, 657 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 185, 262, 312, 851, 860, 922 |
| NciI | CCSGG | 2 cut(s) | 94, 121 |
| NcoI | CCATGG | 1 cut(s) | 829 |
| NdeII | GATC | 4 cut(s) | 358, 615, 946, 1007 |
| NlaIII | CATG | 9 cut(s) | 416, 545, 646, 833, 1037, 1071, 1141, 1175, 1238 |
| NlaIV | GGNNCC | 1 cut(s) | 948 |
| NmuCI | GTSAC | 1 cut(s) | 500 |
| NspI | RCATGY | 1 cut(s) | 646 |
| NspV | TTCGAA | 1 cut(s) | 108 |
| PaeI | GCATGC | 1 cut(s) | 646 |
| PagI | TCATGA | 2 cut(s) | 1033, 1234 |
| PctI | GAATGC | 1 cut(s) | 901 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1029 |
| PfeI | GAWTC | 1 cut(s) | 7 |
| PflFI | GACNNNGTC | 1 cut(s) | 1198 |
| PkrI | GCNGC | 8 cut(s) | 138, 791, 794, 847, 850, 853, 1046, 1098 |
| PleI | GAGTC | 3 cut(s) | 316, 743, 977 |
| PpsI | GAGTC | 3 cut(s) | 316, 743, 977 |
| Psp6I | CCWGG | 2 cut(s) | 45, 655 |
| PspFI | CCCAGC | 2 cut(s) | 188, 942 |
| PspGI | CCWGG | 2 cut(s) | 45, 655 |
| PspN4I | GGNNCC | 1 cut(s) | 948 |
| PspPI | GGNCC | 2 cut(s) | 155, 191 |
| PstI | CTGCAG | 2 cut(s) | 241, 850 |
| PstNI | CAGNNNCTG | 1 cut(s) | 158 |
| PsuI | RGATCY | 1 cut(s) | 946 |
| PsyI | GACNNNGTC | 1 cut(s) | 1198 |
| PvuII | CAGCTG | 2 cut(s) | 188, 792 |
| RsaI | GTAC | 3 cut(s) | 462, 566, 673 |
| RsaNI | GTAC | 3 cut(s) | 461, 565, 672 |
| RseI | CAYNNNNRTG | 2 cut(s) | 417, 1068 |
| SaqAI | TTAA | 5 cut(s) | 69, 423, 471, 578, 780 |
| SatI | GCNGC | 8 cut(s) | 137, 790, 793, 846, 849, 852, 1045, 1097 |
| Sau3AI | GATC | 4 cut(s) | 358, 615, 946, 1007 |
| Sau96I | GGNCC | 2 cut(s) | 155, 191 |
| SchI | GAGTC | 3 cut(s) | 316, 743, 977 |
| ScrFI | CCNGG | 4 cut(s) | 47, 94, 121, 657 |
| SfaNI | GCATC | 2 cut(s) | 977, 1177 |
| SfcI | CTRYAG | 2 cut(s) | 237, 846 |
| SfuI | TTCGAA | 1 cut(s) | 108 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 417, 1068 |
| SmlI | CTYRAG | 1 cut(s) | 796 |
| SmoI | CTYRAG | 1 cut(s) | 796 |
| SphI | GCATGC | 1 cut(s) | 646 |
| Sse9I | AATT | 4 cut(s) | 74, 424, 430, 1058 |
| SsiI | CCGC | 2 cut(s) | 90, 851 |
| SspMI | CTAG | 4 cut(s) | 27, 495, 531, 1230 |
| StyD4I | CCNGG | 4 cut(s) | 45, 92, 119, 655 |
| StyI | CCWWGG | 2 cut(s) | 829, 1122 |
| TaaI | ACNGT | 1 cut(s) | 1207 |
| TaiI | ACGT | 2 cut(s) | 652, 1088 |
| TaqI | TCGA | 3 cut(s) | 108, 361, 882 |
| TasI | AATT | 4 cut(s) | 74, 424, 430, 1058 |
| TatI | WGTACW | 1 cut(s) | 460 |
| TauI | GCSGC | 1 cut(s) | 854 |
| TfiI | GAWTC | 1 cut(s) | 7 |
| Tru1I | TTAA | 5 cut(s) | 69, 423, 471, 578, 780 |
| Tru9I | TTAA | 5 cut(s) | 69, 423, 471, 578, 780 |
| TscAI | CASTG | 4 cut(s) | 147, 322, 625, 982 |
| TseFI | GTSAC | 1 cut(s) | 500 |
| TseI | GCWGC | 7 cut(s) | 136, 789, 792, 845, 848, 1044, 1096 |
| Tsp45I | GTSAC | 1 cut(s) | 500 |
| TspDTI | ATGAA | 4 cut(s) | 894, 1022, 1052, 1056 |
| TspGWI | ACGGA | 2 cut(s) | 470, 659 |
| TspRI | CASTG | 4 cut(s) | 147, 322, 625, 982 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1198 |
| XapI | RAATTY | 2 cut(s) | 430, 1058 |
| XceI | RCATGY | 1 cut(s) | 646 |
| XmiI | GTMKAC | 1 cut(s) | 1088 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1029 |
| XspI | CTAG | 4 cut(s) | 27, 495, 531, 1230 |