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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47650 |
| fragaria_vesca | FvH4_1g03260 FvH4_2g29200 FvH4_2g29200 |
| malus_domestica | MD02G1031600.v1.1 MD15G1124500.v1.1 MD15G1173100.v1.1 |
| prunus_persica | Prupe.1G480000_v2.0.a1 Prupe.1G480000_v2.0.a1 Prupe.7G243100_v2.0.a1 |
| pyrus_communis | pycom02g02640 pycom15g11210 pycom15g15470 |
| rosa_chinensis | RchiOBHm_Chr2g0088401 RchiOBHm_Chr6g0298061 |
| rosa_laevigata | RLG00000011539 RLG00000015950 |
| rosa_multiflora | Rmu_sc0002800.1_g000015 Rmu_sc0004235.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00152700 Rroxscaffold_7G00169980 Rroxscaffold_7G00178810 |
| rosa_rugosa | Rorug01G0483800 Rorug06G0278200 Rorug06G0278200 |
| rosa_samantha | Rh2AG038400 Rh2BG037800 Rh2CG038800 Rh2DG038400 Rh6AG388600 Rh6BG396900 Rh6CG402800 Rh6DG389300 |
| rosa_wichuraiana | Rw2G003040 Rw6G033940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 22 |
| AccB1I | GGYRCC | 1 cut(s) | 22 |
| AciI | CCGC | 2 cut(s) | 306, 330 |
| AfaI | GTAC | 2 cut(s) | 17, 24 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 56 |
| AgsI | TTSAA | 2 cut(s) | 107, 268 |
| AjnI | CCWGG | 2 cut(s) | 55, 99 |
| AluBI | AGCT | 4 cut(s) | 33, 143, 284, 347 |
| AluI | AGCT | 4 cut(s) | 33, 143, 284, 347 |
| Alw21I | GWGCWC | 1 cut(s) | 374 |
| AoxI | GGCC | 2 cut(s) | 3, 80 |
| ApeKI | GCWGC | 1 cut(s) | 69 |
| Asp718I | GGTACC | 1 cut(s) | 22 |
| AspS9I | GGNCC | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 1 cut(s) | 299 |
| AsuII | TTCGAA | 1 cut(s) | 88 |
| BanI | GGYRCC | 1 cut(s) | 22 |
| Bbv12I | GWGCWC | 1 cut(s) | 374 |
| BbvI | GCAGC | 1 cut(s) | 81 |
| BciT130I | CCWGG | 2 cut(s) | 57, 101 |
| BfaI | CTAG | 1 cut(s) | 123 |
| BisI | GCNGC | 1 cut(s) | 70 |
| BlsI | GCNGC | 1 cut(s) | 71 |
| Bme1390I | CCNGG | 2 cut(s) | 57, 101 |
| BmgT120I | GGNCC | 1 cut(s) | 80 |
| BmiI | GGNNCC | 1 cut(s) | 24 |
| BmrFI | CCNGG | 2 cut(s) | 57, 101 |
| Bpu10I | CCTNAGC | 1 cut(s) | 144 |
| Bpu14I | TTCGAA | 1 cut(s) | 88 |
| BpuEI | CTTGAG | 1 cut(s) | 60 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 311, 341 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 56 |
| BseBI | CCWGG | 2 cut(s) | 57, 101 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 56 |
| BseXI | GCAGC | 1 cut(s) | 81 |
| BseYI | CCCAGC | 1 cut(s) | 347 |
| BshFI | GGCC | 2 cut(s) | 5, 82 |
| BshNI | GGYRCC | 1 cut(s) | 22 |
| BsiHKAI | GWGCWC | 1 cut(s) | 374 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 56 |
| BsnI | GGCC | 2 cut(s) | 5, 82 |
| Bsp119I | TTCGAA | 1 cut(s) | 88 |
| Bsp1286I | GDGCHC | 1 cut(s) | 374 |
| Bsp143I | GATC | 1 cut(s) | 259 |
| BspACI | CCGC | 2 cut(s) | 306, 330 |
| BspANI | GGCC | 2 cut(s) | 5, 82 |
| BspLI | GGNNCC | 1 cut(s) | 24 |
| BspT104I | TTCGAA | 1 cut(s) | 88 |
| BspT107I | GGYRCC | 1 cut(s) | 22 |
| BssMI | GATC | 1 cut(s) | 259 |
| Bst2UI | CCWGG | 2 cut(s) | 57, 101 |
| Bst6I | CTCTTC | 1 cut(s) | 269 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 189 |
| BstBI | TTCGAA | 1 cut(s) | 88 |
| BstDEI | CTNAG | 1 cut(s) | 144 |
| BstKTI | GATC | 1 cut(s) | 262 |
| BstMBI | GATC | 1 cut(s) | 259 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 66, 189, 231, 336 |
| BstNI | CCWGG | 2 cut(s) | 57, 101 |
| BstSCI | CCNGG | 2 cut(s) | 55, 99 |
| BstV1I | GCAGC | 1 cut(s) | 81 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 184 |
| BsuRI | GGCC | 2 cut(s) | 5, 82 |
| Cfr13I | GGNCC | 1 cut(s) | 80 |
| CsiI | ACCWGGT | 1 cut(s) | 99 |
| Csp6I | GTAC | 2 cut(s) | 16, 23 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 223, 258 |
| CviAII | CATG | 3 cut(s) | 134, 184, 294 |
| CviJI | RGCY | 9 cut(s) | 5, 33, 44, 82, 143, 149, 284, 301, 347 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 33, 44, 82, 143, 149, 284, 301, 347 |
| CviQI | GTAC | 2 cut(s) | 16, 23 |
| DdeI | CTNAG | 1 cut(s) | 144 |
| DpnI | GATC | 1 cut(s) | 261 |
| DpnII | GATC | 1 cut(s) | 259 |
| DraI | TTTAAA | 1 cut(s) | 280 |
| Eam1104I | CTCTTC | 1 cut(s) | 269 |
| EarI | CTCTTC | 1 cut(s) | 269 |
| EcoO109I | RGGNCCY | 1 cut(s) | 80 |
| EcoRII | CCWGG | 2 cut(s) | 55, 99 |
| FaeI | CATG | 3 cut(s) | 137, 187, 297 |
| FaiI | YATR | 6 cut(s) | 66, 135, 170, 185, 295, 368 |
| FatI | CATG | 3 cut(s) | 133, 183, 293 |
| Fnu4HI | GCNGC | 1 cut(s) | 70 |
| Fsp4HI | GCNGC | 1 cut(s) | 70 |
| FspBI | CTAG | 1 cut(s) | 123 |
| GluI | GCNGC | 1 cut(s) | 70 |
| GsaI | CCCAGC | 1 cut(s) | 351 |
| HaeIII | GGCC | 2 cut(s) | 5, 82 |
| Hin1II | CATG | 3 cut(s) | 137, 187, 297 |
| HinfI | GANTC | 1 cut(s) | 290 |
| HphI | GGTGA | 1 cut(s) | 299 |
| Hpy166II | GTNNAC | 1 cut(s) | 250 |
| Hpy188I | TCNGA | 3 cut(s) | 196, 379, 391 |
| Hpy8I | GTNNAC | 1 cut(s) | 250 |
| HpyAV | CCTTC | 1 cut(s) | 197 |
| HpyCH4IV | ACGT | 1 cut(s) | 386 |
| HpyCH4V | TGCA | 3 cut(s) | 215, 234, 339 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 66, 189, 231, 336 |
| HpyF3I | CTNAG | 1 cut(s) | 144 |
| HpySE526I | ACGT | 1 cut(s) | 386 |
| Hsp92II | CATG | 3 cut(s) | 137, 187, 297 |
| KpnI | GGTACC | 1 cut(s) | 26 |
| Kzo9I | GATC | 1 cut(s) | 259 |
| LmnI | GCTCC | 2 cut(s) | 38, 344 |
| LpnPI | CCDG | 8 cut(s) | 42, 63, 69, 86, 96, 113, 270, 333 |
| Lsp1109I | GCAGC | 1 cut(s) | 81 |
| MabI | ACCWGGT | 1 cut(s) | 99 |
| MaeI | CTAG | 1 cut(s) | 123 |
| MaeII | ACGT | 1 cut(s) | 386 |
| MaeIII | GTNAC | 1 cut(s) | 287 |
| MalI | GATC | 1 cut(s) | 261 |
| MboI | GATC | 1 cut(s) | 259 |
| MboII | GAAGA | 2 cut(s) | 256, 324 |
| MhlI | GDGCHC | 1 cut(s) | 374 |
| MluCI | AATT | 2 cut(s) | 216, 334 |
| MlyI | GAGTC | 1 cut(s) | 284 |
| MnlI | CCTC | 1 cut(s) | 353 |
| MseI | TTAA | 3 cut(s) | 29, 38, 279 |
| MspR9I | CCNGG | 2 cut(s) | 57, 101 |
| MvaI | CCWGG | 2 cut(s) | 57, 101 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 66, 189, 231, 336 |
| NdeII | GATC | 1 cut(s) | 259 |
| NlaIII | CATG | 3 cut(s) | 137, 187, 297 |
| NlaIV | GGNNCC | 1 cut(s) | 24 |
| NmuCI | GTSAC | 1 cut(s) | 287 |
| NspV | TTCGAA | 1 cut(s) | 88 |
| PkrI | GCNGC | 1 cut(s) | 71 |
| PleI | GAGTC | 1 cut(s) | 284 |
| PpsI | GAGTC | 1 cut(s) | 284 |
| Psp6I | CCWGG | 2 cut(s) | 55, 99 |
| PspFI | CCCAGC | 1 cut(s) | 347 |
| PspGI | CCWGG | 2 cut(s) | 55, 99 |
| PspN4I | GGNNCC | 1 cut(s) | 24 |
| PspPI | GGNCC | 1 cut(s) | 80 |
| RsaI | GTAC | 2 cut(s) | 17, 24 |
| RsaNI | GTAC | 2 cut(s) | 16, 23 |
| SaqAI | TTAA | 3 cut(s) | 29, 38, 279 |
| SatI | GCNGC | 1 cut(s) | 70 |
| Sau3AI | GATC | 1 cut(s) | 259 |
| Sau96I | GGNCC | 1 cut(s) | 80 |
| SchI | GAGTC | 1 cut(s) | 284 |
| ScrFI | CCNGG | 2 cut(s) | 57, 101 |
| SduI | GDGCHC | 1 cut(s) | 374 |
| SetI | ASST | 9 cut(s) | 28, 35, 102, 128, 145, 241, 286, 349, 389 |
| SexAI | ACCWGGT | 1 cut(s) | 99 |
| SfuI | TTCGAA | 1 cut(s) | 88 |
| SmlI | CTYRAG | 1 cut(s) | 75 |
| SmoI | CTYRAG | 1 cut(s) | 75 |
| Sse9I | AATT | 2 cut(s) | 216, 334 |
| SsiI | CCGC | 2 cut(s) | 306, 330 |
| SspMI | CTAG | 1 cut(s) | 123 |
| StyD4I | CCNGG | 2 cut(s) | 55, 99 |
| TaiI | ACGT | 1 cut(s) | 389 |
| TaqI | TCGA | 1 cut(s) | 88 |
| TasI | AATT | 2 cut(s) | 216, 334 |
| TatI | WGTACW | 1 cut(s) | 15 |
| Tru1I | TTAA | 3 cut(s) | 29, 38, 279 |
| Tru9I | TTAA | 3 cut(s) | 29, 38, 279 |
| TseFI | GTSAC | 1 cut(s) | 287 |
| TseI | GCWGC | 1 cut(s) | 69 |
| Tsp45I | GTSAC | 1 cut(s) | 287 |
| TspDTI | ATGAA | 1 cut(s) | 177 |
| TspGWI | ACGGA | 1 cut(s) | 357 |
| XspI | CTAG | 1 cut(s) | 123 |