No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47650 |
| fragaria_vesca | FvH4_1g03260 FvH4_2g29200 FvH4_2g29200 |
| malus_domestica | MD02G1031600.v1.1 MD15G1124500.v1.1 MD15G1173100.v1.1 |
| prunus_persica | Prupe.1G480000_v2.0.a1 Prupe.1G480000_v2.0.a1 Prupe.7G243100_v2.0.a1 |
| pyrus_communis | pycom02g02640 pycom15g11210 pycom15g15470 |
| rosa_chinensis | RchiOBHm_Chr2g0088401 RchiOBHm_Chr6g0298061 |
| rosa_laevigata | RLG00000011539 RLG00000015950 |
| rosa_multiflora | Rmu_sc0002800.1_g000015 Rmu_sc0004235.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00152700 Rroxscaffold_7G00169980 Rroxscaffold_7G00178810 |
| rosa_rugosa | Rorug01G0483800 Rorug06G0278200 Rorug06G0278200 |
| rosa_samantha | Rh2AG038400 Rh2BG037800 Rh2CG038800 Rh2DG038400 Rh6AG388600 Rh6BG396900 Rh6CG402800 Rh6DG389300 |
| rosa_wichuraiana | Rw2G003040 Rw6G033940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 267 |
| AfaI | GTAC | 1 cut(s) | 250 |
| AflIII | ACRYGT | 1 cut(s) | 206 |
| AgsI | TTSAA | 3 cut(s) | 40, 78, 277 |
| AluBI | AGCT | 3 cut(s) | 9, 128, 293 |
| AluI | AGCT | 3 cut(s) | 9, 128, 293 |
| Alw21I | GWGCWC | 1 cut(s) | 383 |
| ApeKI | GCWGC | 1 cut(s) | 128 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 125, 157 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 111 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 240, 273 |
| Bbv12I | GWGCWC | 1 cut(s) | 383 |
| BbvI | GCAGC | 1 cut(s) | 115 |
| BccI | CCATC | 1 cut(s) | 158 |
| BfaI | CTAG | 2 cut(s) | 194, 394 |
| BfmI | CTRYAG | 1 cut(s) | 264 |
| BisI | GCNGC | 1 cut(s) | 129 |
| BlsI | GCNGC | 1 cut(s) | 130 |
| BpmI | CTGGAG | 1 cut(s) | 273 |
| BsaBI | GATNNNNATC | 1 cut(s) | 168 |
| BsaJI | CCNNGG | 1 cut(s) | 56 |
| Bse1I | ACTGG | 1 cut(s) | 256 |
| Bse3DI | GCAATG | 1 cut(s) | 355 |
| Bse8I | GATNNNNATC | 1 cut(s) | 168 |
| BseDI | CCNNGG | 1 cut(s) | 56 |
| BseJI | GATNNNNATC | 1 cut(s) | 168 |
| BseMI | GCAATG | 1 cut(s) | 355 |
| BseNI | ACTGG | 1 cut(s) | 256 |
| BseXI | GCAGC | 1 cut(s) | 115 |
| BseYI | CCCAGC | 1 cut(s) | 356 |
| BsiHKAI | GWGCWC | 1 cut(s) | 383 |
| BslFI | GGGAC | 1 cut(s) | 341 |
| BsmFI | GGGAC | 1 cut(s) | 341 |
| Bsp1286I | GDGCHC | 1 cut(s) | 383 |
| BspHI | TCATGA | 1 cut(s) | 375 |
| BsrDI | GCAATG | 1 cut(s) | 355 |
| BsrI | ACTGG | 1 cut(s) | 256 |
| BssECI | CCNNGG | 1 cut(s) | 56 |
| BssT1I | CCWWGG | 1 cut(s) | 56 |
| Bst4CI | ACNGT | 1 cut(s) | 285 |
| BstC8I | GCNNGC | 1 cut(s) | 7 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 378 |
| BstNSI | RCATGY | 1 cut(s) | 210 |
| BstSFI | CTRYAG | 1 cut(s) | 264 |
| BstV1I | GCAGC | 1 cut(s) | 115 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 278 |
| Cac8I | GCNNGC | 1 cut(s) | 7 |
| CciI | TCATGA | 1 cut(s) | 375 |
| Csp6I | GTAC | 1 cut(s) | 249 |
| CviAII | CATG | 2 cut(s) | 207, 376 |
| CviJI | RGCY | 6 cut(s) | 9, 128, 192, 293, 310, 372 |
| CviKI_1 | RGCY | 6 cut(s) | 9, 128, 192, 293, 310, 372 |
| CviQI | GTAC | 1 cut(s) | 249 |
| DraI | TTTAAA | 1 cut(s) | 289 |
| Eco130I | CCWWGG | 1 cut(s) | 56 |
| EcoT14I | CCWWGG | 1 cut(s) | 56 |
| ErhI | CCWWGG | 1 cut(s) | 56 |
| FaeI | CATG | 2 cut(s) | 210, 379 |
| FaiI | YATR | 4 cut(s) | 208, 227, 304, 377 |
| FaqI | GGGAC | 1 cut(s) | 341 |
| FatI | CATG | 2 cut(s) | 206, 375 |
| FblI | GTMKAC | 1 cut(s) | 267 |
| Fnu4HI | GCNGC | 1 cut(s) | 129 |
| Fsp4HI | GCNGC | 1 cut(s) | 129 |
| FspBI | CTAG | 2 cut(s) | 194, 394 |
| GluI | GCNGC | 1 cut(s) | 129 |
| GsaI | CCCAGC | 1 cut(s) | 360 |
| GsuI | CTGGAG | 1 cut(s) | 273 |
| Hin1II | CATG | 2 cut(s) | 210, 379 |
| HinfI | GANTC | 1 cut(s) | 389 |
| Hpy166II | GTNNAC | 2 cut(s) | 268, 299 |
| Hpy188I | TCNGA | 1 cut(s) | 117 |
| Hpy188III | TCNNGA | 1 cut(s) | 376 |
| Hpy8I | GTNNAC | 2 cut(s) | 268, 299 |
| HpyAV | CCTTC | 2 cut(s) | 46, 82 |
| HpyCH4III | ACNGT | 1 cut(s) | 285 |
| HpyCH4V | TGCA | 4 cut(s) | 131, 243, 315, 348 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 378 |
| Hsp92II | CATG | 2 cut(s) | 210, 379 |
| LpnPI | CCDG | 6 cut(s) | 39, 237, 279, 301, 342, 371 |
| Lsp1109I | GCAGC | 1 cut(s) | 115 |
| MaeI | CTAG | 2 cut(s) | 194, 394 |
| MboII | GAAGA | 1 cut(s) | 86 |
| MfeI | CAATTG | 1 cut(s) | 78 |
| MhlI | GDGCHC | 1 cut(s) | 383 |
| MluCI | AATT | 3 cut(s) | 73, 78, 259 |
| MlyI | GAGTC | 1 cut(s) | 383 |
| MnlI | CCTC | 2 cut(s) | 142, 205 |
| MroXI | GAANNNNTTC | 1 cut(s) | 111 |
| MseI | TTAA | 2 cut(s) | 258, 288 |
| MslI | CAYNNNNRTG | 1 cut(s) | 276 |
| MunI | CAATTG | 1 cut(s) | 78 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 378 |
| NlaIII | CATG | 2 cut(s) | 210, 379 |
| NspI | RCATGY | 1 cut(s) | 210 |
| PagI | TCATGA | 1 cut(s) | 375 |
| PciI | ACATGT | 1 cut(s) | 206 |
| PdmI | GAANNNNTTC | 1 cut(s) | 111 |
| PkrI | GCNGC | 1 cut(s) | 130 |
| PleI | GAGTC | 1 cut(s) | 383 |
| PpsI | GAGTC | 1 cut(s) | 383 |
| PscI | ACATGT | 1 cut(s) | 206 |
| PspFI | CCCAGC | 1 cut(s) | 356 |
| RsaI | GTAC | 1 cut(s) | 250 |
| RsaNI | GTAC | 1 cut(s) | 249 |
| RseI | CAYNNNNRTG | 1 cut(s) | 276 |
| SaqAI | TTAA | 2 cut(s) | 258, 288 |
| SatI | GCNGC | 1 cut(s) | 129 |
| SchI | GAGTC | 1 cut(s) | 383 |
| SduI | GDGCHC | 1 cut(s) | 383 |
| SetI | ASST | 7 cut(s) | 11, 28, 93, 130, 153, 250, 295 |
| SfcI | CTRYAG | 1 cut(s) | 264 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 276 |
| Sse9I | AATT | 3 cut(s) | 73, 78, 259 |
| SspMI | CTAG | 2 cut(s) | 194, 394 |
| StyI | CCWWGG | 1 cut(s) | 56 |
| TaaI | ACNGT | 1 cut(s) | 285 |
| TaqI | TCGA | 1 cut(s) | 97 |
| TasI | AATT | 3 cut(s) | 73, 78, 259 |
| Tru1I | TTAA | 2 cut(s) | 258, 288 |
| Tru9I | TTAA | 2 cut(s) | 258, 288 |
| TseI | GCWGC | 1 cut(s) | 128 |
| TspDTI | ATGAA | 2 cut(s) | 120, 364 |
| XceI | RCATGY | 1 cut(s) | 210 |
| XmiI | GTMKAC | 1 cut(s) | 267 |
| XmnI | GAANNNNTTC | 1 cut(s) | 111 |
| XspI | CTAG | 2 cut(s) | 194, 394 |