Histone-lysine N-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17900 |
| fragaria_vesca | FvH4_2g26280 |
| malus_domestica | MD15G1356600.v1.1 |
| prunus_persica | Prupe.1G503800_v2.0.a1 |
| pyrus_communis | pycom15g31870 |
| rosa_chinensis | RchiOBHm_Chr6g0294881 RchiOBHm_Chr6g0294891 |
| rosa_laevigata | RLG00000011833 RLG00000011834 |
| rosa_multiflora | Rmu_sc0008966.1_g000011 Rmu_sc0008966.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00172910 Rroxscaffold_7G00172930 |
| rosa_rugosa | Rorug06G0247700 Rorug06G0248300 Rorug06G0248300 |
| rosa_samantha | Rh4BG161800 Rh6AG361100 Rh6AG361200 Rh6BG367700 Rh6BG367800 Rh6CG374900 Rh6CG375000 Rh6DG361600 Rh6DG361700 |
| rosa_wichuraiana | Rw6G031500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1422 |
| AccII | CGCG | 1 cut(s) | 1407 |
| AciI | CCGC | 3 cut(s) | 155, 817, 1328 |
| AcsI | RAATTY | 1 cut(s) | 1424 |
| AcuI | CTGAAG | 1 cut(s) | 491 |
| AfaI | GTAC | 4 cut(s) | 128, 224, 693, 839 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 62, 883, 1247 |
| AflIII | ACRYGT | 1 cut(s) | 809 |
| AgsI | TTSAA | 1 cut(s) | 1113 |
| AjnI | CCWGG | 5 cut(s) | 97, 161, 600, 1047, 1228 |
| Alw21I | GWGCWC | 2 cut(s) | 22, 206 |
| Alw26I | GTCTC | 5 cut(s) | 81, 341, 589, 1073, 1287 |
| Ama87I | CYCGRG | 1 cut(s) | 1131 |
| AoxI | GGCC | 2 cut(s) | 64, 512 |
| ApeKI | GCWGC | 3 cut(s) | 262, 645, 819 |
| ApoI | RAATTY | 1 cut(s) | 1424 |
| AspLEI | GCGC | 1 cut(s) | 1409 |
| AspS9I | GGNCC | 3 cut(s) | 28, 513, 1378 |
| AsuC2I | CCSGG | 1 cut(s) | 516 |
| AsuHPI | GGTGA | 1 cut(s) | 118 |
| AsuII | TTCGAA | 2 cut(s) | 47, 180 |
| AvaI | CYCGRG | 1 cut(s) | 1131 |
| AvaII | GGWCC | 2 cut(s) | 28, 1378 |
| BaeGI | GKGCMC | 1 cut(s) | 608 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 494, 527 |
| BanII | GRGCYC | 1 cut(s) | 22 |
| BbsI | GAAGAC | 1 cut(s) | 1173 |
| Bbv12I | GWGCWC | 2 cut(s) | 22, 206 |
| BbvCI | CCTCAGC | 2 cut(s) | 151, 723 |
| BbvI | GCAGC | 3 cut(s) | 249, 632, 806 |
| BccI | CCATC | 3 cut(s) | 475, 917, 1150 |
| BceAI | ACGGC | 2 cut(s) | 51, 109 |
| BciT130I | CCWGG | 5 cut(s) | 99, 163, 602, 1049, 1230 |
| BciVI | GTATCC | 1 cut(s) | 627 |
| BclI | TGATCA | 2 cut(s) | 342, 1320 |
| BcnI | CCSGG | 1 cut(s) | 516 |
| BcoDI | GTCTC | 5 cut(s) | 81, 341, 589, 1073, 1287 |
| BfaI | CTAG | 3 cut(s) | 272, 1184, 1289 |
| BfmI | CTRYAG | 4 cut(s) | 229, 820, 1085, 1340 |
| BfuI | GTATCC | 1 cut(s) | 627 |
| BisI | GCNGC | 3 cut(s) | 263, 646, 820 |
| BlsI | GCNGC | 3 cut(s) | 264, 647, 821 |
| Bme1390I | CCNGG | 6 cut(s) | 99, 163, 516, 602, 1049, 1230 |
| Bme18I | GGWCC | 2 cut(s) | 28, 1378 |
| BmeT110I | CYCGRG | 1 cut(s) | 1131 |
| BmgT120I | GGNCC | 3 cut(s) | 28, 513, 1378 |
| BmiI | GGNNCC | 1 cut(s) | 1020 |
| BmrFI | CCNGG | 6 cut(s) | 99, 163, 516, 602, 1049, 1230 |
| BmsI | GCATC | 5 cut(s) | 160, 274, 869, 884, 1113 |
| BpiI | GAAGAC | 1 cut(s) | 1173 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1165, 1197 |
| BpmI | CTGGAG | 2 cut(s) | 81, 1192 |
| Bpu10I | CCTNAGC | 2 cut(s) | 151, 723 |
| Bpu14I | TTCGAA | 2 cut(s) | 47, 180 |
| BpuEI | CTTGAG | 2 cut(s) | 44, 179 |
| BpuMI | CCSGG | 1 cut(s) | 516 |
| BsaI | GGTCTC | 1 cut(s) | 589 |
| BsaJI | CCNNGG | 4 cut(s) | 98, 399, 600, 601 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 62, 883, 1247 |
| Bse1I | ACTGG | 2 cut(s) | 1175, 1208 |
| Bse3DI | GCAATG | 3 cut(s) | 571, 934, 953 |
| BseBI | CCWGG | 5 cut(s) | 99, 163, 602, 1049, 1230 |
| BseDI | CCNNGG | 4 cut(s) | 98, 399, 600, 601 |
| BseGI | GGATG | 3 cut(s) | 899, 1102, 1237 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 62, 883, 1247 |
| BseMI | GCAATG | 3 cut(s) | 571, 934, 953 |
| BseMII | CTCAG | 4 cut(s) | 165, 366, 491, 714 |
| BseNI | ACTGG | 2 cut(s) | 1175, 1208 |
| BseRI | GAGGAG | 1 cut(s) | 139 |
| BseSI | GKGCMC | 1 cut(s) | 608 |
| BseXI | GCAGC | 3 cut(s) | 249, 632, 806 |
| BsgI | GTGCAG | 1 cut(s) | 879 |
| Bsh1236I | CGCG | 1 cut(s) | 1407 |
| BshFI | GGCC | 2 cut(s) | 66, 514 |
| BsiHKAI | GWGCWC | 2 cut(s) | 22, 206 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1131 |
| BsiSI | CCGG | 1 cut(s) | 516 |
| BsiWI | CGTACG | 1 cut(s) | 126 |
| BslFI | GGGAC | 2 cut(s) | 798, 1369 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 62, 883, 1247 |
| BsmAI | GTCTC | 5 cut(s) | 81, 341, 589, 1073, 1287 |
| BsmBI | CGTCTC | 1 cut(s) | 341 |
| BsmFI | GGGAC | 2 cut(s) | 798, 1369 |
| BsmI | GAATGC | 1 cut(s) | 1309 |
| BsnI | GGCC | 2 cut(s) | 66, 514 |
| Bso31I | GGTCTC | 1 cut(s) | 589 |
| BsoBI | CYCGRG | 1 cut(s) | 1131 |
| Bsp119I | TTCGAA | 2 cut(s) | 47, 180 |
| Bsp1286I | GDGCHC | 3 cut(s) | 22, 206, 608 |
| Bsp143I | GATC | 2 cut(s) | 342, 1320 |
| Bsp19I | CCATGG | 1 cut(s) | 399 |
| BspACI | CCGC | 3 cut(s) | 155, 817, 1328 |
| BspANI | GGCC | 2 cut(s) | 66, 514 |
| BspCNI | CTCAG | 4 cut(s) | 164, 367, 490, 715 |
| BspFNI | CGCG | 1 cut(s) | 1407 |
| BspHI | TCATGA | 2 cut(s) | 339, 1371 |
| BspLI | GGNNCC | 1 cut(s) | 1020 |
| BspMAI | CTGCAG | 4 cut(s) | 233, 824, 1089, 1344 |
| BspT104I | TTCGAA | 2 cut(s) | 47, 180 |
| BspTNI | GGTCTC | 1 cut(s) | 589 |
| BsrDI | GCAATG | 3 cut(s) | 571, 934, 953 |
| BsrI | ACTGG | 2 cut(s) | 1175, 1208 |
| BssECI | CCNNGG | 4 cut(s) | 98, 399, 600, 601 |
| BssMI | GATC | 2 cut(s) | 342, 1320 |
| BssT1I | CCWWGG | 1 cut(s) | 399 |
| Bst2UI | CCWGG | 5 cut(s) | 99, 163, 602, 1049, 1230 |
| Bst4CI | ACNGT | 2 cut(s) | 43, 587 |
| Bst6I | CTCTTC | 1 cut(s) | 966 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 466, 566 |
| BstBI | TTCGAA | 2 cut(s) | 47, 180 |
| BstC8I | GCNNGC | 5 cut(s) | 558, 562, 650, 944, 1405 |
| BstDEI | CTNAG | 4 cut(s) | 151, 375, 477, 723 |
| BstDSI | CCRYGG | 1 cut(s) | 399 |
| BstF5I | GGATG | 3 cut(s) | 899, 1102, 1237 |
| BstFNI | CGCG | 1 cut(s) | 1407 |
| BstHHI | GCGC | 1 cut(s) | 1409 |
| BstKTI | GATC | 2 cut(s) | 345, 1323 |
| BstMAI | GTCTC | 5 cut(s) | 81, 341, 589, 1073, 1287 |
| BstMBI | GATC | 2 cut(s) | 342, 1320 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 431, 466, 482, 566, 879, 1252 |
| BstNI | CCWGG | 5 cut(s) | 99, 163, 602, 1049, 1230 |
| BstNSI | RCATGY | 3 cut(s) | 564, 698, 813 |
| BstSCI | CCNGG | 6 cut(s) | 97, 161, 514, 600, 1047, 1228 |
| BstSFI | CTRYAG | 4 cut(s) | 229, 820, 1085, 1340 |
| BstSLI | GKGCMC | 1 cut(s) | 608 |
| BstUI | CGCG | 1 cut(s) | 1407 |
| BstV1I | GCAGC | 3 cut(s) | 249, 632, 806 |
| BstV2I | GAAGAC | 1 cut(s) | 1173 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 950 |
| BsuI | GTATCC | 1 cut(s) | 627 |
| BsuRI | GGCC | 2 cut(s) | 66, 514 |
| BtgI | CCRYGG | 1 cut(s) | 399 |
| BtgZI | GCGATG | 1 cut(s) | 183 |
| BtsCI | GGATG | 3 cut(s) | 899, 1102, 1237 |
| BtsI | GCAGTG | 1 cut(s) | 1082 |
| BtsIMutI | CAGTG | 4 cut(s) | 515, 592, 1082, 1215 |
| Cac8I | GCNNGC | 5 cut(s) | 558, 562, 650, 944, 1405 |
| CciI | TCATGA | 2 cut(s) | 339, 1371 |
| CfoI | GCGC | 1 cut(s) | 1409 |
| Cfr13I | GGNCC | 3 cut(s) | 28, 513, 1378 |
| Csp6I | GTAC | 4 cut(s) | 127, 223, 692, 838 |
| CviAII | CATG | 8 cut(s) | 240, 340, 400, 561, 695, 810, 1352, 1372 |
| CviQI | GTAC | 4 cut(s) | 127, 223, 692, 838 |
| DdeI | CTNAG | 4 cut(s) | 151, 375, 477, 723 |
| DpnI | GATC | 2 cut(s) | 344, 1322 |
| DpnII | GATC | 2 cut(s) | 342, 1320 |
| DraI | TTTAAA | 1 cut(s) | 1146 |
| Eam1104I | CTCTTC | 1 cut(s) | 966 |
| EarI | CTCTTC | 1 cut(s) | 966 |
| Ecl136II | GAGCTC | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 1 cut(s) | 399 |
| Eco24I | GRGCYC | 1 cut(s) | 22 |
| Eco31I | GGTCTC | 1 cut(s) | 589 |
| Eco32I | GATATC | 1 cut(s) | 847 |
| Eco47I | GGWCC | 2 cut(s) | 28, 1378 |
| Eco53kI | GAGCTC | 1 cut(s) | 20 |
| Eco57I | CTGAAG | 1 cut(s) | 491 |
| Eco88I | CYCGRG | 1 cut(s) | 1131 |
| EcoICRI | GAGCTC | 1 cut(s) | 20 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1378 |
| EcoRII | CCWGG | 5 cut(s) | 97, 161, 600, 1047, 1228 |
| EcoRV | GATATC | 1 cut(s) | 847 |
| EcoT14I | CCWWGG | 1 cut(s) | 399 |
| EcoT22I | ATGCAT | 1 cut(s) | 899 |
| EcoT38I | GRGCYC | 1 cut(s) | 22 |
| ErhI | CCWWGG | 1 cut(s) | 399 |
| Esp3I | CGTCTC | 1 cut(s) | 341 |
| FaeI | CATG | 8 cut(s) | 243, 343, 403, 564, 698, 813, 1355, 1375 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1351, 1383 |
| FaqI | GGGAC | 2 cut(s) | 798, 1369 |
| FatI | CATG | 8 cut(s) | 239, 339, 399, 560, 694, 809, 1351, 1371 |
| FauI | CCCGC | 1 cut(s) | 824 |
| FauNDI | CATATG | 2 cut(s) | 438, 938 |
| FbaI | TGATCA | 2 cut(s) | 342, 1320 |
| Fnu4HI | GCNGC | 3 cut(s) | 263, 646, 820 |
| FokI | GGATG | 3 cut(s) | 906, 1089, 1224 |
| FriOI | GRGCYC | 1 cut(s) | 22 |
| Fsp4HI | GCNGC | 3 cut(s) | 263, 646, 820 |
| FspBI | CTAG | 3 cut(s) | 272, 1184, 1289 |
| GlaI | GCGC | 1 cut(s) | 1408 |
| GluI | GCNGC | 3 cut(s) | 263, 646, 820 |
| GsuI | CTGGAG | 2 cut(s) | 81, 1192 |
| HaeIII | GGCC | 2 cut(s) | 66, 514 |
| HapII | CCGG | 1 cut(s) | 516 |
| HhaI | GCGC | 1 cut(s) | 1409 |
| Hin1II | CATG | 8 cut(s) | 243, 343, 403, 564, 698, 813, 1355, 1375 |
| Hin6I | GCGC | 1 cut(s) | 1407 |
| HinP1I | GCGC | 1 cut(s) | 1407 |
| HincII | GTYRAC | 1 cut(s) | 637 |
| HindII | GTYRAC | 1 cut(s) | 637 |
| HindIII | AAGCTT | 5 cut(s) | 34, 293, 554, 1139, 1413 |
| HinfI | GANTC | 6 cut(s) | 158, 182, 766, 917, 933, 1052 |
| HpaI | GTTAAC | 1 cut(s) | 637 |
| HpaII | CCGG | 1 cut(s) | 516 |
| HphI | GGTGA | 1 cut(s) | 118 |
| Hpy166II | GTNNAC | 4 cut(s) | 223, 637, 953, 995 |
| Hpy188I | TCNGA | 8 cut(s) | 253, 445, 480, 765, 922, 1012, 1320, 1435 |
| Hpy8I | GTNNAC | 4 cut(s) | 223, 637, 953, 995 |
| HpyAV | CCTTC | 6 cut(s) | 336, 365, 672, 863, 1044, 1369 |
| HpyCH4III | ACNGT | 2 cut(s) | 43, 587 |
| HpyCH4IV | ACGT | 1 cut(s) | 129 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 431, 466, 482, 566, 879, 1252 |
| HpyF3I | CTNAG | 4 cut(s) | 151, 375, 477, 723 |
| HpySE526I | ACGT | 1 cut(s) | 129 |
| Hsp92II | CATG | 8 cut(s) | 243, 343, 403, 564, 698, 813, 1355, 1375 |
| HspAI | GCGC | 1 cut(s) | 1407 |
| Ksp22I | TGATCA | 2 cut(s) | 342, 1320 |
| KspAI | GTTAAC | 1 cut(s) | 637 |
| Kzo9I | GATC | 2 cut(s) | 342, 1320 |
| LmnI | GCTCC | 3 cut(s) | 963, 1024, 1159 |
| Lsp1109I | GCAGC | 3 cut(s) | 249, 632, 806 |
| LweI | GCATC | 5 cut(s) | 160, 274, 869, 884, 1113 |
| MaeI | CTAG | 3 cut(s) | 272, 1184, 1289 |
| MaeII | ACGT | 1 cut(s) | 129 |
| MaeIII | GTNAC | 5 cut(s) | 233, 319, 581, 737, 1284 |
| MalI | GATC | 2 cut(s) | 344, 1322 |
| MboI | GATC | 2 cut(s) | 342, 1320 |
| MboII | GAAGA | 4 cut(s) | 17, 321, 983, 1178 |
| MfeI | CAATTG | 2 cut(s) | 461, 1074 |
| MhlI | GDGCHC | 3 cut(s) | 22, 206, 608 |
| MluCI | AATT | 8 cut(s) | 365, 461, 576, 590, 655, 1042, 1074, 1424 |
| MlyI | GAGTC | 2 cut(s) | 760, 926 |
| MmeI | TCCRAC | 2 cut(s) | 423, 1374 |
| Mph1103I | ATGCAT | 1 cut(s) | 899 |
| MseI | TTAA | 3 cut(s) | 38, 636, 1145 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1208 |
| MspA1I | CMGCKG | 3 cut(s) | 155, 645, 819 |
| MspI | CCGG | 1 cut(s) | 516 |
| MspR9I | CCNGG | 6 cut(s) | 99, 163, 516, 602, 1049, 1230 |
| MunI | CAATTG | 2 cut(s) | 461, 1074 |
| Mva1269I | GAATGC | 1 cut(s) | 1309 |
| MvaI | CCWGG | 5 cut(s) | 99, 163, 602, 1049, 1230 |
| MvnI | CGCG | 1 cut(s) | 1407 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 431, 466, 482, 566, 879, 1252 |
| NciI | CCSGG | 1 cut(s) | 516 |
| NcoI | CCATGG | 1 cut(s) | 399 |
| NdeI | CATATG | 2 cut(s) | 438, 938 |
| NdeII | GATC | 2 cut(s) | 342, 1320 |
| NlaIII | CATG | 8 cut(s) | 243, 343, 403, 564, 698, 813, 1355, 1375 |
| NlaIV | GGNNCC | 1 cut(s) | 1020 |
| NmeAIII | GCCGAG | 1 cut(s) | 185 |
| NmuCI | GTSAC | 2 cut(s) | 319, 581 |
| NsiI | ATGCAT | 1 cut(s) | 899 |
| NspI | RCATGY | 3 cut(s) | 564, 698, 813 |
| NspV | TTCGAA | 2 cut(s) | 47, 180 |
| PaeI | GCATGC | 1 cut(s) | 564 |
| PagI | TCATGA | 2 cut(s) | 339, 1371 |
| PasI | CCCWGGG | 1 cut(s) | 601 |
| PciI | ACATGT | 1 cut(s) | 809 |
| PctI | GAATGC | 1 cut(s) | 1309 |
| PfeI | GAWTC | 4 cut(s) | 158, 182, 933, 1052 |
| Pfl23II | CGTACG | 1 cut(s) | 126 |
| PkrI | GCNGC | 3 cut(s) | 264, 647, 821 |
| PleI | GAGTC | 2 cut(s) | 760, 925 |
| PpsI | GAGTC | 2 cut(s) | 760, 925 |
| PpuMI | RGGWCCY | 1 cut(s) | 1378 |
| PscI | ACATGT | 1 cut(s) | 809 |
| PsiI | TTATAA | 1 cut(s) | 1422 |
| Psp124BI | GAGCTC | 1 cut(s) | 22 |
| Psp5II | RGGWCCY | 1 cut(s) | 1378 |
| Psp6I | CCWGG | 5 cut(s) | 97, 161, 600, 1047, 1228 |
| PspGI | CCWGG | 5 cut(s) | 97, 161, 600, 1047, 1228 |
| PspLI | CGTACG | 1 cut(s) | 126 |
| PspN4I | GGNNCC | 1 cut(s) | 1020 |
| PspPI | GGNCC | 3 cut(s) | 28, 513, 1378 |
| PspPPI | RGGWCCY | 1 cut(s) | 1378 |
| PstI | CTGCAG | 4 cut(s) | 233, 824, 1089, 1344 |
| PvuII | CAGCTG | 1 cut(s) | 645 |
| RsaI | GTAC | 4 cut(s) | 128, 224, 693, 839 |
| RsaNI | GTAC | 4 cut(s) | 127, 223, 692, 838 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1208 |
| SacI | GAGCTC | 1 cut(s) | 22 |
| SaqAI | TTAA | 3 cut(s) | 38, 636, 1145 |
| SatI | GCNGC | 3 cut(s) | 263, 646, 820 |
| Sau3AI | GATC | 2 cut(s) | 342, 1320 |
| Sau96I | GGNCC | 3 cut(s) | 28, 513, 1378 |
| SchI | GAGTC | 2 cut(s) | 760, 926 |
| ScrFI | CCNGG | 6 cut(s) | 99, 163, 516, 602, 1049, 1230 |
| SduI | GDGCHC | 3 cut(s) | 22, 206, 608 |
| SfaNI | GCATC | 5 cut(s) | 160, 274, 869, 884, 1113 |
| SfcI | CTRYAG | 4 cut(s) | 229, 820, 1085, 1340 |
| SfuI | TTCGAA | 2 cut(s) | 47, 180 |
| SinI | GGWCC | 2 cut(s) | 28, 1378 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1208 |
| SmlI | CTYRAG | 2 cut(s) | 23, 194 |
| SmoI | CTYRAG | 2 cut(s) | 23, 194 |
| SphI | GCATGC | 1 cut(s) | 564 |
| Sse9I | AATT | 8 cut(s) | 365, 461, 576, 590, 655, 1042, 1074, 1424 |
| SsiI | CCGC | 3 cut(s) | 155, 817, 1328 |
| SspI | AATATT | 1 cut(s) | 1259 |
| SspMI | CTAG | 3 cut(s) | 272, 1184, 1289 |
| SstI | GAGCTC | 1 cut(s) | 22 |
| StyD4I | CCNGG | 6 cut(s) | 97, 161, 514, 600, 1047, 1228 |
| StyI | CCWWGG | 1 cut(s) | 399 |
| TaaI | ACNGT | 2 cut(s) | 43, 587 |
| TaiI | ACGT | 1 cut(s) | 132 |
| TaqI | TCGA | 5 cut(s) | 47, 180, 290, 769, 1278 |
| TaqII | GACCGA | 1 cut(s) | 45 |
| TasI | AATT | 8 cut(s) | 365, 461, 576, 590, 655, 1042, 1074, 1424 |
| TatI | WGTACW | 2 cut(s) | 222, 837 |
| TfiI | GAWTC | 4 cut(s) | 158, 182, 933, 1052 |
| Tru1I | TTAA | 3 cut(s) | 38, 636, 1145 |
| Tru9I | TTAA | 3 cut(s) | 38, 636, 1145 |
| TscAI | CASTG | 4 cut(s) | 515, 592, 1089, 1215 |
| TseFI | GTSAC | 2 cut(s) | 319, 581 |
| TseI | GCWGC | 3 cut(s) | 262, 645, 819 |
| Tsp45I | GTSAC | 2 cut(s) | 319, 581 |
| TspDTI | ATGAA | 3 cut(s) | 925, 1360, 1388 |
| TspRI | CASTG | 4 cut(s) | 515, 592, 1089, 1215 |
| VpaK11BI | GGWCC | 2 cut(s) | 28, 1378 |
| XapI | RAATTY | 1 cut(s) | 1424 |
| XbaI | TCTAGA | 1 cut(s) | 271 |
| XceI | RCATGY | 3 cut(s) | 564, 698, 813 |
| XspI | CTAG | 3 cut(s) | 272, 1184, 1289 |
| Zsp2I | ATGCAT | 1 cut(s) | 899 |