Rmu_sc0008966.1_g000011

Histone-lysine N-methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008966.1
Physical Location & Seq
Reverse (-)
49310 .. 54761
5452 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008966.1_g000011.1.cds

Sequence Viewer

Length: 1707 bp
atggaggaattgcagagcgctctcgggaaccgcggcctgaccgtttcgaaacttgcagagaaaggccgttgcctcctcaccaccaaagacttctatccaggggaagtgatcataagccaagagccctatgtgtgcgtcccgaacaactccgccggtaactccaagtgcgatgcttgcttcgaatccagtcacctcaagaagtgctccggttgccaggttgtctactactgctccagcacttgccagaagtcggaatggaagctgcaccgtctcgaatgtcaagctctctcgaagcttccagaggagaagagaagggctgttacgccttctctgcgtctcatgatcagactctactgtcgttctaagctgcagtctcagaagactattcctacttctgctatggacaattacaatttggtagaggcgttggtggctcacatgtcggaggttgatgagaagcaaatggtgctgtatgctcagatggctaaccttgtcagcttgatacttcagcggcctgatatcaatgtaaaagagattgcggagaatttctcaaagtttgcgtgcaatgcacacacaatttgtgacagtgaattgaaacccctgggtacaggactctatcctgtcatatcaatcattaaccacagttgcctgccgaattctgttctattatttgagggaaggtcagctgttgttcgtgctgtacaacatatacccaaaggagctgaggtgttgataagttacatcgacactgctggaagcactgtgactcggcaaaaggcactgaaggaacaatacctttttacctgtgcatgtccccgctgcattaaagcggatatccaagaaagtgcaattctggaaggctaccgatgcaaggataataaatgtgatggttttttgcttcgcggctctgatgacaagggatttatatgccaacaatgtggacgtcttaagagcaaagaagagataatagagatggaaagtgaaataagatcattgcaggaaaaggctattatagctgtagagtctgcaccttctatcacttaccaggaagttatagctatcttgaaggcaatggagacactccagaggtatctatgtcatgatttctgcatctatttgatcccaacttgggaggagcttataaagaatttgatgaaggcagaagactggagtgaagctctagcatattgcagattgactattccagtgtatcaaagagtatatccaggctttcatccttctcttggattgcaatactatacctgtggaaagcttgaatggttacttggagaaactaatgacgctgtgaaatctctgaccaaggcagtagatatactgcggattactcatgggacaagtacaccctttatgaaggatcttttcaggagtactgcattcggatcctttccatttggggtgatccatgatctgggtgccgctgtagtgcttcggcggtggaaggagatagcgccctcggatcttcggtggcgattgcctgatacccggaggatcagtctttgggatcctagatccggtgtaggcctagccttgttcgcagcgcaggggtgccgctcagggggactgccgacagtggggtcgatcagagtgggcttgctccggccagatcacctgacgatgctaccaccagattgtgggtttgcggcttgtgatgtcgacttcttcttgacagttgatggccttcgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

568

Amino Acids

63.55

Weight (kDa)

8.03

Isoelectric Point (pI)

48.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1142
AasI GACNNNNNNGTC 2 cut(s) 354, 1594
AatII GACGTC 1 cut(s) 946
AccB1I GGYRCC 2 cut(s) 1433, 1566
AccB7I CCANNNNNTGG 2 cut(s) 1429, 1652
AccBSI CCGCTC 1 cut(s) 1572
AccI GTMKAC 2 cut(s) 222, 1674
AccII CGCG 2 cut(s) 33, 903
AcoI YGGCCR 1 cut(s) 1619
AcsI RAATTY 3 cut(s) 544, 655, 1147
AcuI CTGAAG 2 cut(s) 491, 803
AcyI GRCGYC 1 cut(s) 943
AfaI GTAC 4 cut(s) 607, 702, 1360, 1390
AfeI AGCGCT 1 cut(s) 19
AfiI CCNNNNNNNGG 9 cut(s) 250, 871, 1129, 1244, 1429, 1532, 1576, 1592, 1652
AflII CTTAAG 1 cut(s) 947
AflIII ACRYGT 1 cut(s) 438
AgsI TTSAA 3 cut(s) 595, 1066, 1277
AjnI CCWGG 5 cut(s) 97, 213, 600, 1044, 1225
AjuI GAANNNNNNNTTGG 2 cut(s) 1269, 1301
Alw21I GWGCWC 1 cut(s) 206
Alw26I GTCTC 4 cut(s) 275, 341, 378, 1070
Ama87I CYCGRG 1 cut(s) 23
Aor51HI AGCGCT 1 cut(s) 19
AoxI GGCC 6 cut(s) 34, 64, 512, 1540, 1619, 1696
ApeKI GCWGC 4 cut(s) 262, 367, 819, 1556
ApoI RAATTY 3 cut(s) 544, 655, 1147
AspLEI GCGC 3 cut(s) 20, 1471, 1561
AsuC2I CCSGG 1 cut(s) 1504
AsuHPI GGTGA 4 cut(s) 70, 182, 1429, 1619
AsuII TTCGAA 2 cut(s) 47, 180
AvaI CYCGRG 1 cut(s) 23
BamHI GGATCC 2 cut(s) 1400, 1522
BanI GGYRCC 2 cut(s) 1433, 1566
BanII GRGCYC 1 cut(s) 126
BarI GAAGNNNNNNTAC 4 cut(s) 304, 336, 776, 808
BbsI GAAGAC 2 cut(s) 386, 1170
Bbv12I GWGCWC 1 cut(s) 206
BbvCI CCTCAGC 1 cut(s) 723
BbvI GCAGC 4 cut(s) 249, 354, 806, 1568
BccI CCATC 4 cut(s) 475, 881, 967, 1688
BceAI ACGGC 1 cut(s) 51
BciT130I CCWGG 5 cut(s) 99, 215, 602, 1046, 1227
BclI TGATCA 2 cut(s) 108, 342
BcnI CCSGG 1 cut(s) 1504
BcoDI GTCTC 4 cut(s) 275, 341, 378, 1070
BfaI CTAG 3 cut(s) 1181, 1527, 1544
BfmI CTRYAG 3 cut(s) 368, 1017, 1440
BfoI RGCGCY 2 cut(s) 21, 1472
BfrI CTTAAG 1 cut(s) 947
BmcAI AGTACT 1 cut(s) 1390
Bme1390I CCNGG 6 cut(s) 99, 215, 602, 1046, 1227, 1504
BmeT110I CYCGRG 1 cut(s) 23
BmiI GGNNCC 5 cut(s) 29, 1402, 1435, 1524, 1568
BmrFI CCNGG 6 cut(s) 99, 215, 602, 1046, 1227, 1504
BmsI GCATC 4 cut(s) 160, 857, 1119, 1626
BpiI GAAGAC 2 cut(s) 386, 1170
BplI GAGNNNNNCTC 4 cut(s) 533, 565, 1162, 1194
BpmI CTGGAG 3 cut(s) 217, 1067, 1189
Bpu10I CCTNAGC 2 cut(s) 723, 1573
Bpu14I TTCGAA 2 cut(s) 47, 180
BpuEI CTTGAG 1 cut(s) 179
BpuMI CCSGG 1 cut(s) 1504
BsaHI GRCGYC 1 cut(s) 943
BsaJI CCNNGG 6 cut(s) 31, 98, 600, 601, 1320, 1473
BsaWI WCCGGW 2 cut(s) 206, 1532
BsaXI ACNNNNNCTCC 6 cut(s) 215, 245, 711, 741, 1498, 1528
Bsc4I CCNNNNNNNGG 9 cut(s) 250, 871, 1129, 1244, 1429, 1532, 1576, 1592, 1652
Bse118I RCCGGY 1 cut(s) 152
Bse1I ACTGG 3 cut(s) 186, 1172, 1205
Bse3DI GCAATG 3 cut(s) 571, 992, 1077
BseBI CCWGG 5 cut(s) 99, 215, 602, 1046, 1227
BseDI CCNNGG 6 cut(s) 31, 98, 600, 601, 1320, 1473
BseGI GGATG 1 cut(s) 1234
BseLI CCNNNNNNNGG 9 cut(s) 250, 871, 1129, 1244, 1429, 1532, 1576, 1592, 1652
BseMI GCAATG 3 cut(s) 571, 992, 1077
BseMII CTCAG 4 cut(s) 389, 491, 714, 1587
BseNI ACTGG 3 cut(s) 186, 1172, 1205
BseRI GAGGAG 3 cut(s) 65, 317, 1148
BseXI GCAGC 4 cut(s) 249, 354, 806, 1568
BsgI GTGCAG 2 cut(s) 248, 1011
Bsh1236I CGCG 2 cut(s) 33, 903
BshFI GGCC 6 cut(s) 36, 66, 514, 1542, 1621, 1698
BshNI GGYRCC 2 cut(s) 1433, 1566
BsiHKAI GWGCWC 1 cut(s) 206
BsiHKCI CYCGRG 1 cut(s) 23
BsiSI CCGG 5 cut(s) 153, 207, 1504, 1533, 1618
BslFI GGGAC 4 cut(s) 122, 798, 1366, 1593
BslI CCNNNNNNNGG 9 cut(s) 250, 871, 1129, 1244, 1429, 1532, 1576, 1592, 1652
BsmAI GTCTC 4 cut(s) 275, 341, 378, 1070
BsmBI CGTCTC 2 cut(s) 275, 341
BsmFI GGGAC 4 cut(s) 122, 798, 1366, 1593
BsmI GAATGC 1 cut(s) 1394
BsnI GGCC 6 cut(s) 36, 66, 514, 1542, 1621, 1698
BsoBI CYCGRG 1 cut(s) 23
Bsp119I TTCGAA 2 cut(s) 47, 180
Bsp1286I GDGCHC 2 cut(s) 126, 206
Bsp1407I TGTACA 1 cut(s) 700
BspANI GGCC 6 cut(s) 36, 66, 514, 1542, 1621, 1698
BspCNI CTCAG 4 cut(s) 388, 490, 715, 1586
BspFNI CGCG 2 cut(s) 33, 903
BspHI TCATGA 2 cut(s) 339, 1099
BspLI GGNNCC 5 cut(s) 29, 1402, 1435, 1524, 1568
BspMAI CTGCAG 1 cut(s) 372
BspT104I TTCGAA 2 cut(s) 47, 180
BspT107I GGYRCC 2 cut(s) 1433, 1566
BspTI CTTAAG 1 cut(s) 947
BsrBI CCGCTC 1 cut(s) 1572
BsrDI GCAATG 3 cut(s) 571, 992, 1077
BsrFI RCCGGY 1 cut(s) 152
BsrGI TGTACA 1 cut(s) 700
BsrI ACTGG 3 cut(s) 186, 1172, 1205
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 6 cut(s) 31, 98, 600, 601, 1320, 1473
BssNI GRCGYC 1 cut(s) 943
BssT1I CCWWGG 1 cut(s) 1320
Bst2UI CCWGG 5 cut(s) 99, 215, 602, 1046, 1227
Bst4CI ACNGT 8 cut(s) 43, 269, 356, 587, 644, 763, 1591, 1690
Bst6I CTCTTC 2 cut(s) 302, 954
BstACI GRCGYC 1 cut(s) 943
BstAFI CTTAAG 1 cut(s) 947
BstAPI GCANNNNNTGC 1 cut(s) 466
BstAUI TGTACA 1 cut(s) 700
BstBI TTCGAA 2 cut(s) 47, 180
BstC8I GCNNGC 4 cut(s) 175, 562, 650, 1613
BstDEI CTNAG 5 cut(s) 363, 375, 477, 723, 1573
BstDSI CCRYGG 1 cut(s) 31
BstF5I GGATG 1 cut(s) 1234
BstFNI CGCG 2 cut(s) 33, 903
BstH2I RGCGCY 2 cut(s) 21, 1472
BstHHI GCGC 3 cut(s) 20, 1471, 1561
BstMAI GTCTC 4 cut(s) 275, 341, 378, 1070
BstNI CCWGG 5 cut(s) 99, 215, 602, 1046, 1227
BstNSI RCATGY 2 cut(s) 442, 813
BstSCI CCNGG 6 cut(s) 97, 213, 600, 1044, 1225, 1502
BstSFI CTRYAG 3 cut(s) 368, 1017, 1440
BstUI CGCG 2 cut(s) 33, 903
BstV1I GCAGC 4 cut(s) 249, 354, 806, 1568
BstV2I GAAGAC 2 cut(s) 386, 1170
BstX2I RGATCY 5 cut(s) 1375, 1400, 1477, 1522, 1529
BstXI CCANNNNNNTGG 1 cut(s) 938
BstYI RGATCY 5 cut(s) 1375, 1400, 1477, 1522, 1529
BsuRI GGCC 6 cut(s) 36, 66, 514, 1542, 1621, 1698
BtgI CCRYGG 1 cut(s) 31
BtgZI GCGATG 1 cut(s) 183
BtsCI GGATG 1 cut(s) 1234
BtsI GCAGTG 1 cut(s) 747
BtsIMutI CAGTG 6 cut(s) 592, 747, 759, 779, 1212, 1596
Cac8I GCNNGC 4 cut(s) 175, 562, 650, 1613
CciI TCATGA 2 cut(s) 339, 1099
CfoI GCGC 3 cut(s) 20, 1471, 1561
Cfr10I RCCGGY 1 cut(s) 152
Cfr42I CCGCGG 1 cut(s) 34
CseI GACGC 3 cut(s) 124, 323, 1310
Csp6I GTAC 4 cut(s) 606, 701, 1359, 1389
CviAII CATG 6 cut(s) 340, 439, 810, 1100, 1349, 1424
CviQI GTAC 4 cut(s) 606, 701, 1359, 1389
DdeI CTNAG 5 cut(s) 363, 375, 477, 723, 1573
DrdI GACNNNNNNGTC 2 cut(s) 354, 1594
DseDI GACNNNNNNGTC 2 cut(s) 354, 1594
EaeI YGGCCR 1 cut(s) 1619
Eam1104I CTCTTC 2 cut(s) 302, 954
EarI CTCTTC 2 cut(s) 302, 954
EciI GGCGGA 1 cut(s) 139
Eco130I CCWWGG 1 cut(s) 1320
Eco147I AGGCCT 1 cut(s) 1542
Eco24I GRGCYC 1 cut(s) 126
Eco32I GATATC 2 cut(s) 520, 835
Eco47III AGCGCT 1 cut(s) 19
Eco57I CTGAAG 2 cut(s) 491, 803
Eco88I CYCGRG 1 cut(s) 23
EcoRI GAATTC 1 cut(s) 655
EcoRII CCWGG 5 cut(s) 97, 213, 600, 1044, 1225
EcoRV GATATC 2 cut(s) 520, 835
EcoT14I CCWWGG 1 cut(s) 1320
EcoT38I GRGCYC 1 cut(s) 126
ErhI CCWWGG 1 cut(s) 1320
Esp3I CGTCTC 2 cut(s) 275, 341
FaeI CATG 6 cut(s) 343, 442, 813, 1103, 1352, 1427
FaqI GGGAC 4 cut(s) 122, 798, 1366, 1593
FatI CATG 6 cut(s) 339, 438, 809, 1099, 1348, 1423
FauI CCCGC 1 cut(s) 824
FbaI TGATCA 2 cut(s) 108, 342
FblI GTMKAC 2 cut(s) 222, 1674
FokI GGATG 1 cut(s) 1221
FriOI GRGCYC 1 cut(s) 126
FspBI CTAG 3 cut(s) 1181, 1527, 1544
GlaI GCGC 3 cut(s) 19, 1470, 1560
GsuI CTGGAG 3 cut(s) 217, 1067, 1189
HaeII RGCGCY 2 cut(s) 21, 1472
HaeIII GGCC 6 cut(s) 36, 66, 514, 1542, 1621, 1698
HapII CCGG 5 cut(s) 153, 207, 1504, 1533, 1618
HgaI GACGC 3 cut(s) 124, 323, 1310
HhaI GCGC 3 cut(s) 20, 1471, 1561
Hin1I GRCGYC 1 cut(s) 943
Hin1II CATG 6 cut(s) 343, 442, 813, 1103, 1352, 1427
Hin6I GCGC 3 cut(s) 18, 1469, 1559
HinP1I GCGC 3 cut(s) 18, 1469, 1559
HincII GTYRAC 1 cut(s) 1675
HindII GTYRAC 1 cut(s) 1675
HindIII AAGCTT 2 cut(s) 293, 1271
HinfI GANTC 5 cut(s) 182, 348, 612, 766, 1022
HpaII CCGG 5 cut(s) 153, 207, 1504, 1533, 1618
HphI GGTGA 4 cut(s) 70, 182, 1429, 1619
Hpy166II GTNNAC 4 cut(s) 223, 941, 1361, 1675
Hpy8I GTNNAC 4 cut(s) 223, 941, 1361, 1675
HpyCH4III ACNGT 8 cut(s) 43, 269, 356, 587, 644, 763, 1591, 1690
HpyCH4IV ACGT 1 cut(s) 943
HpyF3I CTNAG 5 cut(s) 363, 375, 477, 723, 1573
HpySE526I ACGT 1 cut(s) 943
Hsp92I GRCGYC 1 cut(s) 943
Hsp92II CATG 6 cut(s) 343, 442, 813, 1103, 1352, 1427
HspAI GCGC 3 cut(s) 18, 1469, 1559
Ksp22I TGATCA 2 cut(s) 108, 342
KspI CCGCGG 1 cut(s) 34
LmnI GCTCC 5 cut(s) 209, 236, 719, 1135, 1620
Lsp1109I GCAGC 4 cut(s) 249, 354, 806, 1568
LweI GCATC 4 cut(s) 160, 857, 1119, 1626
MaeI CTAG 3 cut(s) 1181, 1527, 1544
MaeII ACGT 1 cut(s) 943
MaeIII GTNAC 7 cut(s) 155, 188, 319, 581, 737, 763, 1281
MbiI CCGCTC 1 cut(s) 1572
MboII GAAGA 6 cut(s) 319, 391, 971, 1175, 1472, 1672
MflI RGATCY 5 cut(s) 1375, 1400, 1477, 1522, 1529
MhlI GDGCHC 2 cut(s) 126, 206
MluCI AATT 9 cut(s) 8, 406, 412, 544, 576, 590, 655, 849, 1147
MlyI GAGTC 4 cut(s) 342, 606, 760, 1031
MmeI TCCRAC 2 cut(s) 231, 423
MseI TTAA 3 cut(s) 636, 825, 948
MspA1I CMGCKG 5 cut(s) 33, 511, 686, 819, 1439
MspCI CTTAAG 1 cut(s) 947
MspI CCGG 5 cut(s) 153, 207, 1504, 1533, 1618
MspR9I CCNGG 6 cut(s) 99, 215, 602, 1046, 1227, 1504
Mva1269I GAATGC 1 cut(s) 1394
MvaI CCWGG 5 cut(s) 99, 215, 602, 1046, 1227
MvnI CGCG 2 cut(s) 33, 903
NciI CCSGG 1 cut(s) 1504
NlaIII CATG 6 cut(s) 343, 442, 813, 1103, 1352, 1427
NlaIV GGNNCC 5 cut(s) 29, 1402, 1435, 1524, 1568
NmeAIII GCCGAG 1 cut(s) 748
NmuCI GTSAC 3 cut(s) 188, 581, 763
NspI RCATGY 2 cut(s) 442, 813
NspV TTCGAA 2 cut(s) 47, 180
PagI TCATGA 2 cut(s) 339, 1099
PasI CCCWGGG 1 cut(s) 601
PceI AGGCCT 1 cut(s) 1542
PciI ACATGT 1 cut(s) 438
PctI GAATGC 1 cut(s) 1394
PfeI GAWTC 1 cut(s) 182
PflMI CCANNNNNTGG 2 cut(s) 1429, 1652
PleI GAGTC 4 cut(s) 342, 606, 760, 1030
PpsI GAGTC 4 cut(s) 342, 606, 760, 1030
PscI ACATGT 1 cut(s) 438
PsiI TTATAA 1 cut(s) 1142
Psp6I CCWGG 5 cut(s) 97, 213, 600, 1044, 1225
PspGI CCWGG 5 cut(s) 97, 213, 600, 1044, 1225
PspN4I GGNNCC 5 cut(s) 29, 1402, 1435, 1524, 1568
PstI CTGCAG 1 cut(s) 372
PsuI RGATCY 5 cut(s) 1375, 1400, 1477, 1522, 1529
PvuII CAGCTG 1 cut(s) 686
RsaI GTAC 4 cut(s) 607, 702, 1360, 1390
RsaNI GTAC 4 cut(s) 606, 701, 1359, 1389
SacII CCGCGG 1 cut(s) 34
SalI GTCGAC 1 cut(s) 1673
SaqAI TTAA 3 cut(s) 636, 825, 948
ScaI AGTACT 1 cut(s) 1390
SchI GAGTC 4 cut(s) 342, 606, 760, 1031
ScrFI CCNGG 6 cut(s) 99, 215, 602, 1046, 1227, 1504
SduI GDGCHC 2 cut(s) 126, 206
SfaNI GCATC 4 cut(s) 160, 857, 1119, 1626
SfcI CTRYAG 3 cut(s) 368, 1017, 1440
Sfr303I CCGCGG 1 cut(s) 34
SfuI TTCGAA 2 cut(s) 47, 180
SgrBI CCGCGG 1 cut(s) 34
SmlI CTYRAG 2 cut(s) 194, 947
SmoI CTYRAG 2 cut(s) 194, 947
Sse9I AATT 9 cut(s) 8, 406, 412, 544, 576, 590, 655, 849, 1147
SseBI AGGCCT 1 cut(s) 1542
SspMI CTAG 3 cut(s) 1181, 1527, 1544
StuI AGGCCT 1 cut(s) 1542
StyD4I CCNGG 6 cut(s) 97, 213, 600, 1044, 1225, 1502
StyI CCWWGG 1 cut(s) 1320
TaaI ACNGT 8 cut(s) 43, 269, 356, 587, 644, 763, 1591, 1690
TaiI ACGT 1 cut(s) 946
TaqI TCGA 7 cut(s) 47, 180, 273, 290, 744, 1598, 1674
TasI AATT 9 cut(s) 8, 406, 412, 544, 576, 590, 655, 849, 1147
TatI WGTACW 3 cut(s) 700, 1358, 1388
TauI GCSGC 6 cut(s) 36, 514, 906, 1439, 1572, 1664
TfiI GAWTC 1 cut(s) 182
Tru1I TTAA 3 cut(s) 636, 825, 948
Tru9I TTAA 3 cut(s) 636, 825, 948
TscAI CASTG 6 cut(s) 592, 754, 766, 786, 1212, 1596
TseFI GTSAC 3 cut(s) 188, 581, 763
TseI GCWGC 4 cut(s) 262, 367, 819, 1556
Tsp45I GTSAC 3 cut(s) 188, 581, 763
TspDTI ATGAA 3 cut(s) 1169, 1223, 1385
TspRI CASTG 6 cut(s) 592, 754, 766, 786, 1212, 1596
Van91I CCANNNNNTGG 2 cut(s) 1429, 1652
Vha464I CTTAAG 1 cut(s) 947
XapI RAATTY 3 cut(s) 544, 655, 1147
XceI RCATGY 2 cut(s) 442, 813
XmiI GTMKAC 2 cut(s) 222, 1674
XspI CTAG 3 cut(s) 1181, 1527, 1544
ZraI GACGTC 1 cut(s) 944
ZrmI AGTACT 1 cut(s) 1390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.