Prupe.1G573800_v2.0.a1

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
46753154 .. 46758358
5205 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G573800.1

Sequence Viewer

Length: 1461 bp
ATGGCATTGCAGAGGCAGCTCTTGAAGAAAGCTCTAGGGGAAGCCAAGACCAAGATTGGTGGCTCCCATTTTTGTCACAGGCCATCTCTCTGCTGTTCTTTCTCTACGCTTCCTTCTTCTGGTGCTGATCATGAGGCTGCTCTGCCTTTGCTGCCGCCGTTTGGTTACGAGCCTAAGCCTTACAATGGACCTCGGGGCGATGAGGTCTTCCAGAAGCGAAAGAAGTTTCTGGGTCCTTCTCTTTTCCATTATTATCAGAACCCTCTCAATATTGTTGAAGGGAAGATGCAATATTTGTTTGATGAGAATGGCAGGCGCTACCTTGATGCTTTTGCTGGGATAGTAACTGTTTCTTGTGGACATTGCCATCCAGAAGTTTTAAATGCTATCATGGAGCAGAGCAAGCTTCTGCAGCATGCCACAACCATTTACCTGCACCATGCAATAGCTGATTTTGCCGAGGCATTAGCTTCAAAAATGCCTGGAAATTTAAAGGTTGTTTACTTTGTGAATTCTGGGACAGAAGCAAATGAATTGGCAATGTTGATGGCTCGTCTATATAGTGGCAGTCTTGATATGATTTCGTTGAGAAATGCATATCATGGGGGAAGTTCTAATACAATTGGTTTGACCGCTTTGAACACATGGAAGTATCCAATTCCACAGGGTGACATTCATCACGTTGTAAATCCGGATCCATACCATGGAATCTTTGGCTCAGATGCCAAAAGTTATGTTAAAGATGTACAAGATCACATTGATTATGGAACTTCAGGAAAAGTTGCTGGATTTATATCTGAAACAATTCAGGGAGTTGGAGGAGCAGTTGAATTGGCACCTGGATATTTAAAACTGGTTTATGACATTGTTCGCAAGGCTGGTGGTGTCTGCATTGCTGATGAAGTACAAACTGGTTTTGGGCGCACAGGAAGCCATTATTGGGGCTTTGAAACGCAGGGTGTCATTCCTGATATAGTTACCATGGCTAAGGGCATTGGAAACGGGTTGCCATTGGGAGCAGTGGTGACAACACCAGAAATAGCAAGTGTACTAGCCCAGAAGATTCAATTCAACACTTTTGGTGGAAACCCTGTATGCTCTGCTGGAGGGCTGGCAGTGCTCAGAGTTATTGATAAGGAGAAGCGTCAAGTTCATTGCGCTGATGTTGGCTCTCACTTGCTTGGGCGTTTGAGAGATCTTCAGCAAAGATATGAAATCATTGGAGATGTCAGAGGCCGAGGCTTAATGGTGGGGATAGAGCTTGTCACCGACAGGAAAGAGAAGACGCCTGCGAAGGCAGAAACCACAGTTTTGTTCGAGAAACTCAGAGAGCTCGGAGTTCTAGTTGGCAAAGGGGGACTACATGGAAATGTTTTTAGGATAAAGCCACCAATGTGTTTTACCAAAGATGATGCAGATTTTCTTGTTGATGCTTTGGACTACTCCATGTCAAAGTTGTGA

Protein Analysis

487

Amino Acids

52.88

Weight (kDa)

7.99

Isoelectric Point (pI)

26.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 441
AccB1I GGYRCC 1 cut(s) 835
AccB7I CCANNNNNTGG 1 cut(s) 704
AccIII TCCGGA 1 cut(s) 691
AciI CCGC 2 cut(s) 155, 633
AclWI GGATC 2 cut(s) 689, 702
AcsI RAATTY 2 cut(s) 487, 511
AcuI CTGAAG 2 cut(s) 756, 1184
AcyI GRCGYC 1 cut(s) 1286
AdeI CACNNNGTG 1 cut(s) 668
AfaI GTAC 3 cut(s) 747, 906, 1050
AfiI CCNNNNNNNGG 5 cut(s) 119, 161, 185, 704, 940
AgsI TTSAA 8 cut(s) 25, 278, 474, 640, 830, 950, 1067, 1072
AjnI CCWGG 2 cut(s) 481, 838
AjuI GAANNNNNNNTTGG 2 cut(s) 922, 954
AleI CACNNNNGTG 1 cut(s) 1393
AluBI AGCT 7 cut(s) 19, 32, 406, 449, 470, 1261, 1333
AluI AGCT 7 cut(s) 19, 32, 406, 449, 470, 1261, 1333
Alw21I GWGCWC 2 cut(s) 1122, 1335
AlwI GGATC 2 cut(s) 689, 702
Ama87I CYCGRG 1 cut(s) 192
Aor13HI TCCGGA 1 cut(s) 691
AoxI GGCC 2 cut(s) 80, 1234
ApeKI GCWGC 4 cut(s) 16, 137, 151, 412
ApoI RAATTY 2 cut(s) 487, 511
Asp700I GAANNNNTTC 1 cut(s) 804
AspLEI GCGC 3 cut(s) 318, 924, 1160
AspS9I GGNCC 2 cut(s) 188, 233
AsuHPI GGTGA 3 cut(s) 680, 1036, 1258
AvaI CYCGRG 1 cut(s) 192
AvaII GGWCC 2 cut(s) 188, 233
BamHI GGATCC 1 cut(s) 694
BanI GGYRCC 1 cut(s) 835
BanII GRGCYC 1 cut(s) 1335
BarI GAAGNNNNNNTAC 2 cut(s) 601, 633
BbsI GAAGAC 2 cut(s) 199, 1289
Bbv12I GWGCWC 2 cut(s) 1122, 1335
BbvI GCAGC 4 cut(s) 28, 124, 138, 424
BccI CCATC 3 cut(s) 91, 375, 541
BceAI ACGGC 1 cut(s) 142
BciT130I CCWGG 2 cut(s) 483, 840
BciVI GTATCC 1 cut(s) 663
BclI TGATCA 1 cut(s) 127
BfaI CTAG 3 cut(s) 35, 1052, 1343
BfmI CTRYAG 1 cut(s) 410
BfoI RGCGCY 1 cut(s) 319
BfuAI ACCTGC 1 cut(s) 441
BfuI GTATCC 1 cut(s) 663
BglII AGATCT 1 cut(s) 1195
BisI GCNGC 5 cut(s) 17, 138, 152, 155, 413
BlsI GCNGC 5 cut(s) 18, 139, 153, 156, 414
Bme1390I CCNGG 2 cut(s) 483, 840
Bme18I GGWCC 2 cut(s) 188, 233
BmeT110I CYCGRG 1 cut(s) 192
BmgT120I GGNCC 2 cut(s) 188, 233
BmiI GGNNCC 4 cut(s) 64, 234, 696, 837
BmrFI CCNGG 2 cut(s) 483, 840
BmsI GCATC 5 cut(s) 276, 316, 712, 1402, 1420
BpiI GAAGAC 2 cut(s) 199, 1289
BpmI CTGGAG 1 cut(s) 1125
Bpu10I CCTNAGC 2 cut(s) 174, 987
BsaBI GATNNNNATC 1 cut(s) 793
BsaHI GRCGYC 1 cut(s) 1286
BsaJI CCNNGG 5 cut(s) 191, 459, 703, 981, 1237
BsaWI WCCGGW 1 cut(s) 691
BsaXI ACNNNNNCTCC 6 cut(s) 810, 840, 1008, 1038, 1329, 1359
Bsc4I CCNNNNNNNGG 5 cut(s) 119, 161, 185, 704, 940
Bse1I ACTGG 2 cut(s) 858, 916
Bse3DI GCAATG 5 cut(s) 5, 361, 546, 891, 1153
Bse8I GATNNNNATC 1 cut(s) 793
BseAI TCCGGA 1 cut(s) 691
BseBI CCWGG 2 cut(s) 483, 840
BseDI CCNNGG 5 cut(s) 191, 459, 703, 981, 1237
BseGI GGATG 1 cut(s) 367
BseJI GATNNNNATC 1 cut(s) 793
BseLI CCNNNNNNNGG 5 cut(s) 119, 161, 185, 704, 940
BseMI GCAATG 5 cut(s) 5, 361, 546, 891, 1153
BseMII CTCAG 3 cut(s) 732, 1135, 1339
BseNI ACTGG 2 cut(s) 858, 916
BseRI GAGGAG 1 cut(s) 834
BseXI GCAGC 4 cut(s) 28, 124, 138, 424
BseYI CCCAGC 1 cut(s) 335
BsgI GTGCAG 1 cut(s) 419
BshFI GGCC 2 cut(s) 82, 1236
BshNI GGYRCC 1 cut(s) 835
BsiHKAI GWGCWC 2 cut(s) 1122, 1335
BsiHKCI CYCGRG 1 cut(s) 192
BsiSI CCGG 1 cut(s) 692
BslFI GGGAC 2 cut(s) 532, 1371
BslI CCNNNNNNNGG 5 cut(s) 119, 161, 185, 704, 940
BsmFI GGGAC 2 cut(s) 532, 1371
BsnI GGCC 2 cut(s) 82, 1236
BsoBI CYCGRG 1 cut(s) 192
Bsp1286I GDGCHC 2 cut(s) 1122, 1335
Bsp13I TCCGGA 1 cut(s) 691
Bsp1407I TGTACA 1 cut(s) 745
Bsp143I GATC 4 cut(s) 127, 694, 751, 1195
Bsp19I CCATGG 2 cut(s) 703, 981
BspACI CCGC 2 cut(s) 155, 633
BspANI GGCC 2 cut(s) 82, 1236
BspCNI CTCAG 3 cut(s) 731, 1134, 1338
BspEI TCCGGA 1 cut(s) 691
BspHI TCATGA 1 cut(s) 130
BspLI GGNNCC 4 cut(s) 64, 234, 696, 837
BspMAI CTGCAG 1 cut(s) 414
BspMI ACCTGC 1 cut(s) 441
BspPI GGATC 2 cut(s) 689, 702
BspT107I GGYRCC 1 cut(s) 835
BsrDI GCAATG 5 cut(s) 5, 361, 546, 891, 1153
BsrGI TGTACA 1 cut(s) 745
BsrI ACTGG 2 cut(s) 858, 916
BssECI CCNNGG 5 cut(s) 191, 459, 703, 981, 1237
BssMI GATC 4 cut(s) 127, 694, 751, 1195
BssNI GRCGYC 1 cut(s) 1286
BssT1I CCWWGG 2 cut(s) 703, 981
Bst2UI CCWGG 2 cut(s) 483, 840
Bst4CI ACNGT 2 cut(s) 349, 1309
BstACI GRCGYC 1 cut(s) 1286
BstAUI TGTACA 1 cut(s) 745
BstC8I GCNNGC 5 cut(s) 314, 404, 417, 1113, 1290
BstDEI CTNAG 5 cut(s) 174, 718, 987, 1121, 1325
BstDSI CCRYGG 2 cut(s) 703, 981
BstF5I GGATG 1 cut(s) 367
BstH2I RGCGCY 1 cut(s) 319
BstHHI GCGC 3 cut(s) 318, 924, 1160
BstKTI GATC 4 cut(s) 130, 697, 754, 1198
BstMBI GATC 4 cut(s) 127, 694, 751, 1195
BstMWI GCNNNNNNNGC 7 cut(s) 16, 151, 403, 412, 455, 930, 1117
BstNI CCWGG 2 cut(s) 483, 840
BstNSI RCATGY 1 cut(s) 419
BstSCI CCNGG 2 cut(s) 481, 838
BstSFI CTRYAG 1 cut(s) 410
BstV1I GCAGC 4 cut(s) 28, 124, 138, 424
BstV2I GAAGAC 2 cut(s) 199, 1289
BstX2I RGATCY 2 cut(s) 694, 1195
BstYI RGATCY 2 cut(s) 694, 1195
BsuI GTATCC 1 cut(s) 663
BsuRI GGCC 2 cut(s) 82, 1236
BtgI CCRYGG 2 cut(s) 703, 981
BtgZI GCGATG 1 cut(s) 213
BtsCI GGATG 1 cut(s) 367
BtsI GCAGTG 2 cut(s) 1026, 1122
BtsIMutI CAGTG 2 cut(s) 1026, 1122
BveI ACCTGC 1 cut(s) 441
Cac8I GCNNGC 5 cut(s) 314, 404, 417, 1113, 1290
CciI TCATGA 1 cut(s) 130
CfoI GCGC 3 cut(s) 318, 924, 1160
Cfr13I GGNCC 2 cut(s) 188, 233
CseI GACGC 2 cut(s) 1133, 1294
Csp6I GTAC 3 cut(s) 746, 905, 1049
CspCI CAANNNNNGTGG 4 cut(s) 40, 75, 862, 897
CviQI GTAC 3 cut(s) 746, 905, 1049
DdeI CTNAG 5 cut(s) 174, 718, 987, 1121, 1325
DpnI GATC 4 cut(s) 129, 696, 753, 1197
DpnII GATC 4 cut(s) 127, 694, 751, 1195
DraI TTTAAA 3 cut(s) 381, 492, 849
DraIII CACNNNGTG 1 cut(s) 668
Ecl136II GAGCTC 1 cut(s) 1333
Eco130I CCWWGG 2 cut(s) 703, 981
Eco24I GRGCYC 1 cut(s) 1335
Eco47I GGWCC 2 cut(s) 188, 233
Eco53kI GAGCTC 1 cut(s) 1333
Eco57I CTGAAG 2 cut(s) 756, 1184
Eco88I CYCGRG 1 cut(s) 192
EcoICRI GAGCTC 1 cut(s) 1333
EcoO109I RGGNCCY 1 cut(s) 233
EcoRI GAATTC 1 cut(s) 511
EcoRII CCWGG 2 cut(s) 481, 838
EcoT14I CCWWGG 2 cut(s) 703, 981
EcoT22I ATGCAT 1 cut(s) 598
EcoT38I GRGCYC 1 cut(s) 1335
ErhI CCWWGG 2 cut(s) 703, 981
FaqI GGGAC 2 cut(s) 532, 1371
FbaI TGATCA 1 cut(s) 127
Fnu4HI GCNGC 5 cut(s) 17, 138, 152, 155, 413
FokI GGATG 1 cut(s) 354
FriOI GRGCYC 1 cut(s) 1335
Fsp4HI GCNGC 5 cut(s) 17, 138, 152, 155, 413
FspBI CTAG 3 cut(s) 35, 1052, 1343
GlaI GCGC 3 cut(s) 317, 923, 1159
GluI GCNGC 5 cut(s) 17, 138, 152, 155, 413
GsaI CCCAGC 1 cut(s) 339
GsuI CTGGAG 1 cut(s) 1125
HaeII RGCGCY 1 cut(s) 319
HaeIII GGCC 2 cut(s) 82, 1236
HapII CCGG 1 cut(s) 692
HgaI GACGC 2 cut(s) 1133, 1294
HhaI GCGC 3 cut(s) 318, 924, 1160
Hin1I GRCGYC 1 cut(s) 1286
Hin6I GCGC 3 cut(s) 316, 922, 1158
HinP1I GCGC 3 cut(s) 316, 922, 1158
HindIII AAGCTT 1 cut(s) 404
HinfI GANTC 2 cut(s) 708, 1063
HpaII CCGG 1 cut(s) 692
HphI GGTGA 3 cut(s) 680, 1036, 1258
Hpy166II GTNNAC 3 cut(s) 359, 502, 1049
Hpy188I TCNGA 7 cut(s) 258, 721, 799, 1124, 1232, 1328, 1337
Hpy188III TCNNGA 9 cut(s) 22, 131, 211, 371, 572, 692, 774, 968, 1318
Hpy8I GTNNAC 3 cut(s) 359, 502, 1049
HpyAV CCTTC 4 cut(s) 123, 246, 272, 1288
HpyCH4III ACNGT 2 cut(s) 349, 1309
HpyCH4IV ACGT 1 cut(s) 681
HpyCH4V TGCA 8 cut(s) 10, 289, 412, 436, 443, 596, 891, 1415
HpyF10VI GCNNNNNNNGC 7 cut(s) 16, 151, 403, 412, 455, 930, 1117
HpyF3I CTNAG 5 cut(s) 174, 718, 987, 1121, 1325
HpySE526I ACGT 1 cut(s) 681
Hsp92I GRCGYC 1 cut(s) 1286
HspAI GCGC 3 cut(s) 316, 922, 1158
Kpn2I TCCGGA 1 cut(s) 691
Ksp22I TGATCA 1 cut(s) 127
Kzo9I GATC 4 cut(s) 127, 694, 751, 1195
LmnI GCTCC 4 cut(s) 68, 394, 821, 1016
Lsp1109I GCAGC 4 cut(s) 28, 124, 138, 424
LweI GCATC 5 cut(s) 276, 316, 712, 1402, 1420
MaeI CTAG 3 cut(s) 35, 1052, 1343
MaeII ACGT 1 cut(s) 681
MaeIII GTNAC 7 cut(s) 74, 164, 343, 668, 976, 1024, 1264
MalI GATC 4 cut(s) 129, 696, 753, 1197
MboI GATC 4 cut(s) 127, 694, 751, 1195
MboII GAAGA 7 cut(s) 37, 108, 199, 295, 1072, 1190, 1294
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 2 cut(s) 694, 1195
MhlI GDGCHC 2 cut(s) 1122, 1335
MluCI AATT 8 cut(s) 487, 511, 533, 621, 657, 804, 830, 1067
MmeI TCCRAC 1 cut(s) 796
Mph1103I ATGCAT 1 cut(s) 598
MroI TCCGGA 1 cut(s) 691
MroXI GAANNNNTTC 1 cut(s) 804
MseI TTAA 5 cut(s) 380, 491, 738, 848, 1244
MslI CAYNNNNRTG 2 cut(s) 1368, 1393
MspI CCGG 1 cut(s) 692
MspR9I CCNGG 2 cut(s) 483, 840
MunI CAATTG 1 cut(s) 621
MvaI CCWGG 2 cut(s) 483, 840
MwoI GCNNNNNNNGC 7 cut(s) 16, 151, 403, 412, 455, 930, 1117
NcoI CCATGG 2 cut(s) 703, 981
NdeII GATC 4 cut(s) 127, 694, 751, 1195
NlaIV GGNNCC 4 cut(s) 64, 234, 696, 837
NmeAIII GCCGAG 2 cut(s) 484, 1262
NmuCI GTSAC 4 cut(s) 74, 668, 1024, 1264
NsiI ATGCAT 1 cut(s) 598
NspI RCATGY 1 cut(s) 419
OliI CACNNNNGTG 1 cut(s) 1393
PaeI GCATGC 1 cut(s) 419
PagI TCATGA 1 cut(s) 130
PdmI GAANNNNTTC 1 cut(s) 804
PfeI GAWTC 2 cut(s) 708, 1063
PflMI CCANNNNNTGG 1 cut(s) 704
PkrI GCNGC 5 cut(s) 18, 139, 153, 156, 414
PpuMI RGGWCCY 1 cut(s) 233
Psp124BI GAGCTC 1 cut(s) 1335
Psp5II RGGWCCY 1 cut(s) 233
Psp6I CCWGG 2 cut(s) 481, 838
PspFI CCCAGC 1 cut(s) 335
PspGI CCWGG 2 cut(s) 481, 838
PspN4I GGNNCC 4 cut(s) 64, 234, 696, 837
PspPI GGNCC 2 cut(s) 188, 233
PspPPI RGGWCCY 1 cut(s) 233
PstI CTGCAG 1 cut(s) 414
PsuI RGATCY 2 cut(s) 694, 1195
RsaI GTAC 3 cut(s) 747, 906, 1050
RsaNI GTAC 3 cut(s) 746, 905, 1049
RseI CAYNNNNRTG 2 cut(s) 1368, 1393
SacI GAGCTC 1 cut(s) 1335
SaqAI TTAA 5 cut(s) 380, 491, 738, 848, 1244
SatI GCNGC 5 cut(s) 17, 138, 152, 155, 413
Sau3AI GATC 4 cut(s) 127, 694, 751, 1195
Sau96I GGNCC 2 cut(s) 188, 233
ScrFI CCNGG 2 cut(s) 483, 840
SduI GDGCHC 2 cut(s) 1122, 1335
SfaNI GCATC 5 cut(s) 276, 316, 712, 1402, 1420
SfcI CTRYAG 1 cut(s) 410
SinI GGWCC 2 cut(s) 188, 233
SmiMI CAYNNNNRTG 2 cut(s) 1368, 1393
SphI GCATGC 1 cut(s) 419
Sse9I AATT 8 cut(s) 487, 511, 533, 621, 657, 804, 830, 1067
SsiI CCGC 2 cut(s) 155, 633
SspI AATATT 2 cut(s) 271, 293
SspMI CTAG 3 cut(s) 35, 1052, 1343
SstI GAGCTC 1 cut(s) 1335
StyD4I CCNGG 2 cut(s) 481, 838
StyI CCWWGG 2 cut(s) 703, 981
TaaI ACNGT 2 cut(s) 349, 1309
TaiI ACGT 1 cut(s) 684
TaqI TCGA 1 cut(s) 1317
TasI AATT 8 cut(s) 487, 511, 533, 621, 657, 804, 830, 1067
TatI WGTACW 3 cut(s) 745, 904, 1048
TauI GCSGC 1 cut(s) 157
TfiI GAWTC 2 cut(s) 708, 1063
Tru1I TTAA 5 cut(s) 380, 491, 738, 848, 1244
Tru9I TTAA 5 cut(s) 380, 491, 738, 848, 1244
TscAI CASTG 2 cut(s) 1026, 1122
TseFI GTSAC 4 cut(s) 74, 668, 1024, 1264
TseI GCWGC 4 cut(s) 16, 137, 151, 412
Tsp45I GTSAC 4 cut(s) 74, 668, 1024, 1264
TspDTI ATGAA 5 cut(s) 546, 665, 915, 1142, 1227
TspRI CASTG 2 cut(s) 1026, 1122
Van91I CCANNNNNTGG 1 cut(s) 704
VpaK11BI GGWCC 2 cut(s) 188, 233
XapI RAATTY 2 cut(s) 487, 511
XceI RCATGY 1 cut(s) 419
XcmI CCANNNNNNNNNTGG 1 cut(s) 710
XmnI GAANNNNTTC 1 cut(s) 804
XspI CTAG 3 cut(s) 35, 1052, 1343
Zsp2I ATGCAT 1 cut(s) 598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.