Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003402

Physical Location & Seq

Genomic Coordinates Reverse (-)

63303560 .. 63311186

Gene Structure 7627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00127710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGGCGTTTCACAGGCACCTTTTCAGAAGCGTTTTGAAACCCAAGATTGGTGGTGCTAGGGTGTCTTTCTCTACCGTTCAATCTGCCACTGCTGACGAAGCGGCTGTGCCTTCTTTGCCGCCGTTCGATTACCAGCCGAGGCCCTACAATGGGCCACGCGCCGATCACGTCTTCGAGAAGCGGAAGAAGTTTCTGGGTCCTTCTCTTTTCCACTTCTACCAGAAGCCTATCAATATTGTAGAAGGGAAGATGCAATATCTGTTTGATGAGGATGGCAGGCGCTACCTCGATGCTTTTGCTGGAATCGTGACTGTTTCTTGCGGACATTGTCATCCGGTTGTTTTGAATGCTATCATGGAGCAGAGCAGGCTTCTTCAGCATGCTACGACCATATACTTGCACCACACGATCGGAGATTTCGCAGAAGCATTGGCTTCAAAAATGCCTGGAAATTTGAAGGTGGTATACTTTGTAAATTCTGGGACAGAAGCAAATGAGTTGGCGATGCTGATGGCTCGTCTGTACAGTGGTAGTCTTGGTATGATTGCGTTGAGAAATGCATATCATGGTGGAAGTTCCAATACGATTGGTTTGACAGCGCTGAACACATGGAAGTATCCAATTCCACAGGGTGAAATTCATCACGTTGTAAATCCAGATCCATACCGTGGAGTCTTTGGCTCTGATGCCAAAAGTTATGCTAAAGATGTGCAAGATCACATTGATTATGGGACTTCTGGAAAAGTTGCTGGATTCATATCGGAAACAATTCAGGGAGTTGGAGGAGCAGTTGAATTGGCCCCTGGTTATTTGAAAATGGTTTATGACATTGTTCGAAAGGCTGGTGGTCTCTGCATCGCTGATGAAGTACAAACTGGGTTTGGCCGCACTGGAAGTCACTATTGGGGCTTTGAAACTCAGGGTGTCATTCCTGATATTGTAACTATGGCAAAGGGCATTGGAAATGGATTGCCCTTGGGAGCAGTGGTGACTACACCAGAAATCGCAAGTGTACTAGCACAAAAGACACATTTCAACACATATGGTGGAAACCCTGTATGCTCTGCGGGAGGGCTTGCAGTACTTAAAGTTATTGATGAGGAGAAGCGTCAAACTCACTCCGCTGATGTTGGCTCTCACTTGCTTGGTCGTTTGAGAGATCTTCAGCAGAGACACGACACACCTAGCACTTATGTTTGCCTCTCTCATGGTCCTTCCTCGGACAGGAGATTAGCTGAGCTAATAGGGAAGGTTTCAATTTTCCTAGGGGTTATGTCGGGGTTTCCTGAATCTGCCTTCTCAGGTGCTTGTGGTCTGGTATATGACTTAATCCCCAGAATAGTTCGTGTAGCTTTATCTGTTAATATAGTCATTGGCGATGTGAGAGGCCGAGGATTGATGGTCGGAGTAGAGCTCGTGACCGACAGGACTGAAAAGACACCTGCTAAGGCAGAAACTGCGGTGTTGTTTGAAAACCTTAGAGAGCTAGGAATTCTGGTTGGGAAAGGAGGTTTACACGGCAACGTATTTAGGGTAAAACCACCAATGTGTTTTACCAAGGACGATGCAGGGCTAAAATGGAGGAGAGGGTATGAGACTATGAGGAGCGGAGATGTGAAGTGGGACCTGCACCGTATCAAATCTGAAATTAACATCTTTGTAAAAATGCAACTCCTAATTGCTTCTGTGATGCTGATAAAGACAAGGATTTGGCCGAGGAAGCCTAATCTGAGTGAATTGGAAGTTCCAATGACCTGGCCAGCTTATTTGGGAATTGCAAGGTTCAAGGGTTGTGGCCATGATAAGATCACAGAGACTTCTGATCAACAATACAAACTCAGGAATGGAGATTATCTTTCATCATTTTACTACTTCAATAGACATCACGAACATTGCAAAGAGGAGAAGATATTACTTGCAAAGGAAGGAATGTTAAGAAAAGGTGTCGGGGAAGATTATACAACATTCTTTGCTAGAGCTACATGGTCATCGGGCAGCAAGGGCTGGCCCATCAGGGAGTTCTCTAAAGTCGAAAGCCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0008144 GO:0008150 GO:0008270 GO:0010035 GO:0010038 GO:0016020 GO:0019842 GO:0030170 GO:0031090 GO:0036094 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048037 GO:0050662 GO:0050896 GO:0070279 GO:0097159 GO:0098588 GO:0098805 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00250 ko00260 ko00270 ko00280 ko01100 ko01110 map00250 map00260 map00270 map00280 map01100 map01110

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

680

Amino Acids

75.09

Weight (kDa)

9.08

Isoelectric Point (pI)

31.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_3	PF00202	76 - 394	2.3e-70	Aminotransferase class-III
Aminotran_3	PF00202	457 - 523	1.4e-06	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39660 AT4G39660
fragaria_vesca	FvH4_1g21920
malus_domestica	MD15G1330500.v1.1
prunus_persica	Prupe.1G573800_v2.0.a1 Prupe.1G573800_v2.0.a1 Prupe.6G177100_v2.0.a1 Prupe.6G177100_v2.0.a1
pyrus_communis	pycom15g29470
rosa_chinensis	RchiOBHm_Chr2g0115931 RchiOBHm_Chr6g0298301
rosa_laevigata	RLG00000011518 RLG00000018224
rosa_multiflora	Rmu_sc0003420.1_g000003 Rmu_ssc0000197.1_g000006
rosa_roxburghii	Rroxscaffold_2G00127710 Rroxscaffold_2G00128500 Rroxscaffold_7G00169760
rosa_rugosa	Rorug02G0201300 Rorug06G0279900 Rorug06G0280000 Rorug06G0280100 Rorug06G0280200 Rorug06G0280300 Rorug06G0280300 Rorug06G0280400
rosa_samantha	Rh2AG258100 Rh2CG264700 Rh2DG266400 Rh6AG390800 Rh6BG399000 Rh6CG404900 Rh6DG391400
rosa_wichuraiana	Rw2G020240 Rw6G034120 Rw6G034160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1450
Acc36I	ACCTGC	2 cut(s)	1450, 1635
AccB1I	GGYRCC	1 cut(s)	15
AccB7I	CCANNNNNTGG	1 cut(s)	668
AccBSI	CCGCTC	1 cut(s)	1608
AccI	GTMKAC	1 cut(s)	465
AccII	CGCG	1 cut(s)	159
AciI	CCGC	9 cut(s)	101, 119, 181, 321, 886, 1067, 1122, 1460, 1608
AclWI	GGATC	1 cut(s)	653
AcoI	YGGCCR	4 cut(s)	883, 1712, 1757, 1795
AcsI	RAATTY	4 cut(s)	451, 475, 636, 1491
AcuI	CTGAAG	2 cut(s)	359, 1148
AdeI	CACNNNGTG	1 cut(s)	632
AfaI	GTAC	4 cut(s)	524, 870, 1014, 1083
AfeI	AGCGCT	1 cut(s)	600
AfiI	CCNNNNNNNGG	5 cut(s)	47, 149, 150, 668, 1224
AjiI	CACGTC	1 cut(s)	169
AjnI	CCWGG	3 cut(s)	445, 802, 1754
AjuI	GAANNNNNNNTTGG	2 cut(s)	886, 918
AleI	CACNNNNGTG	1 cut(s)	1546
AluBI	AGCT	7 cut(s)	1235, 1240, 1352, 1414, 1486, 1763, 1979
AluI	AGCT	7 cut(s)	1235, 1240, 1352, 1414, 1486, 1763, 1979
Alw21I	GWGCWC	1 cut(s)	1416
Alw26I	GTCTC	4 cut(s)	854, 1165, 1589, 1808
AlwI	GGATC	1 cut(s)	653
AlwNI	CAGNNNCTG	1 cut(s)	1457
Aor51HI	AGCGCT	1 cut(s)	600
AoxI	GGCC	9 cut(s)	140, 152, 798, 883, 1387, 1712, 1757, 1795, 2006
ApeKI	GCWGC	1 cut(s)	1995
ApoI	RAATTY	4 cut(s)	451, 475, 636, 1491
Asp700I	GAANNNNTTC	1 cut(s)	768
AspA2I	CCTAGG	1 cut(s)	1264
AspLEI	GCGC	3 cut(s)	161, 282, 601
AspS9I	GGNCC	7 cut(s)	141, 152, 197, 799, 1211, 1624, 2007
AsuHPI	GGTGA	2 cut(s)	644, 1000
AsuII	TTCGAA	1 cut(s)	835
AvaII	GGWCC	3 cut(s)	197, 1211, 1624
AvrII	CCTAGG	1 cut(s)	1264
BalI	TGGCCA	2 cut(s)	1759, 1797
BanI	GGYRCC	1 cut(s)	15
BanII	GRGCYC	1 cut(s)	1416
BarI	GAAGNNNNNNTAC	4 cut(s)	449, 481, 565, 597
BauI	CACGAG	1 cut(s)	1415
BbsI	GAAGAC	1 cut(s)	163
Bbv12I	GWGCWC	1 cut(s)	1416
BbvI	GCAGC	1 cut(s)	2007
BccI	CCATC	4 cut(s)	266, 505, 1393, 2018
BceAI	ACGGC	2 cut(s)	106, 1534
BcgI	CGANNNNNNTGC	2 cut(s)	278, 312
BciT130I	CCWGG	3 cut(s)	447, 804, 1756
BciVI	GTATCC	1 cut(s)	627
BclI	TGATCA	1 cut(s)	1822
BcoDI	GTCTC	4 cut(s)	854, 1165, 1589, 1808
BfaI	CTAG	6 cut(s)	57, 1016, 1185, 1265, 1487, 1974
BfoI	RGCGCY	2 cut(s)	283, 602
BfuAI	ACCTGC	2 cut(s)	1450, 1635
BfuI	GTATCC	1 cut(s)	627
BglII	AGATCT	1 cut(s)	1159
BisI	GCNGC	4 cut(s)	102, 119, 886, 1996
BlnI	CCTAGG	1 cut(s)	1264
BlpI	GCTNAGC	1 cut(s)	1236
BlsI	GCNGC	4 cut(s)	103, 120, 887, 1997
BmcAI	AGTACT	1 cut(s)	1083
Bme1390I	CCNGG	3 cut(s)	447, 804, 1756
Bme18I	GGWCC	3 cut(s)	197, 1211, 1624
BmgBI	CACGTC	1 cut(s)	169
BmgT120I	GGNCC	7 cut(s)	141, 152, 197, 799, 1211, 1624, 2007
BmiI	GGNNCC	4 cut(s)	17, 198, 801, 1625
BmrFI	CCNGG	3 cut(s)	447, 804, 1756
BmrI	ACTGGG	1 cut(s)	885
BmsI	GCATC	7 cut(s)	240, 280, 495, 676, 864, 1555, 1680
BmuI	ACTGGG	1 cut(s)	885
BpiI	GAAGAC	1 cut(s)	163
BplI	GAGNNNNNCTC	2 cut(s)	1398, 1430
Bpu10I	CCTNAGC	1 cut(s)	1446
Bpu1102I	GCTNAGC	1 cut(s)	1236
Bpu14I	TTCGAA	1 cut(s)	835
BsaBI	GATNNNNATC	1 cut(s)	757
BsaI	GGTCTC	1 cut(s)	854
BsaJI	CCNNGG	9 cut(s)	137, 667, 802, 975, 1218, 1264, 1390, 1557, 1715
BsaWI	WCCGGW	1 cut(s)	334
BsaXI	ACNNNNNCTCC	4 cut(s)	774, 804, 972, 1002
Bsc4I	CCNNNNNNNGG	5 cut(s)	47, 149, 150, 668, 1224
Bse1I	ACTGG	2 cut(s)	880, 895
Bse3DI	GCAATG	1 cut(s)	1891
Bse8I	GATNNNNATC	1 cut(s)	757
BseBI	CCWGG	3 cut(s)	447, 804, 1756
BseDI	CCNNGG	9 cut(s)	137, 667, 802, 975, 1218, 1264, 1390, 1557, 1715
BseGI	GGATG	2 cut(s)	277, 331
BseJI	GATNNNNATC	1 cut(s)	757
BseLI	CCNNNNNNNGG	5 cut(s)	47, 149, 150, 668, 1224
BseMI	GCAATG	1 cut(s)	1891
BseMII	CTCAG	5 cut(s)	932, 1227, 1314, 1721, 1852
BseNI	ACTGG	2 cut(s)	880, 895
BseRI	GAGGAG	5 cut(s)	798, 1115, 1597, 1618, 1916
BseXI	GCAGC	1 cut(s)	2007
BsgI	GTGCAG	1 cut(s)	1613
Bsh1236I	CGCG	1 cut(s)	159
Bsh1285I	CGRYCG	1 cut(s)	411
BshFI	GGCC	9 cut(s)	142, 154, 800, 885, 1389, 1714, 1759, 1797, 2008
BshNI	GGYRCC	1 cut(s)	15
BsiEI	CGRYCG	1 cut(s)	411
BsiHKAI	GWGCWC	1 cut(s)	1416
BsiSI	CCGG	1 cut(s)	335
BslFI	GGGAC	3 cut(s)	496, 745, 1637
BslI	CCNNNNNNNGG	5 cut(s)	47, 149, 150, 668, 1224
BsmAI	GTCTC	4 cut(s)	854, 1165, 1589, 1808
BsmFI	GGGAC	3 cut(s)	496, 745, 1637
BsmI	GAATGC	1 cut(s)	352
BsnI	GGCC	9 cut(s)	142, 154, 800, 885, 1389, 1714, 1759, 1797, 2008
Bso31I	GGTCTC	1 cut(s)	854
Bsp119I	TTCGAA	1 cut(s)	835
Bsp1286I	GDGCHC	1 cut(s)	1416
Bsp1407I	TGTACA	1 cut(s)	522
Bsp143I	GATC	7 cut(s)	163, 408, 658, 715, 1159, 1806, 1822
Bsp1720I	GCTNAGC	1 cut(s)	1236
BspACI	CCGC	9 cut(s)	101, 119, 181, 321, 886, 1067, 1122, 1460, 1608
BspANI	GGCC	9 cut(s)	142, 154, 800, 885, 1389, 1714, 1759, 1797, 2008
BspCNI	CTCAG	5 cut(s)	931, 1228, 1313, 1722, 1851
BspFNI	CGCG	1 cut(s)	159
BspLI	GGNNCC	4 cut(s)	17, 198, 801, 1625
BspMI	ACCTGC	2 cut(s)	1450, 1635
BspPI	GGATC	1 cut(s)	653
BspT104I	TTCGAA	1 cut(s)	835
BspT107I	GGYRCC	1 cut(s)	15
BspTNI	GGTCTC	1 cut(s)	854
BsrBI	CCGCTC	1 cut(s)	1608
BsrDI	GCAATG	1 cut(s)	1891
BsrGI	TGTACA	1 cut(s)	522
BsrI	ACTGG	2 cut(s)	880, 895
BssECI	CCNNGG	9 cut(s)	137, 667, 802, 975, 1218, 1264, 1390, 1557, 1715
BssMI	GATC	7 cut(s)	163, 408, 658, 715, 1159, 1806, 1822
BssNAI	GTATAC	1 cut(s)	466
BssSI	CACGAG	1 cut(s)	1415
BssT1I	CCWWGG	3 cut(s)	975, 1264, 1557
Bst1107I	GTATAC	1 cut(s)	466
Bst2BI	CACGAG	1 cut(s)	1415
Bst2UI	CCWGG	3 cut(s)	447, 804, 1756
Bst4CI	ACNGT	5 cut(s)	76, 313, 527, 668, 1634
BstAPI	GCANNNNNTGC	1 cut(s)	1457
BstAUI	TGTACA	1 cut(s)	522
BstBI	TTCGAA	1 cut(s)	835
BstC8I	GCNNGC	6 cut(s)	278, 368, 381, 1077, 1761, 2006
BstDEI	CTNAG	7 cut(s)	918, 1236, 1300, 1446, 1478, 1730, 1838
BstDSI	CCRYGG	1 cut(s)	667
BstENI	CCTNNNNNAGG	1 cut(s)	1222
BstF5I	GGATG	2 cut(s)	277, 331
BstFNI	CGCG	1 cut(s)	159
BstH2I	RGCGCY	2 cut(s)	283, 602
BstHHI	GCGC	3 cut(s)	161, 282, 601
BstKTI	GATC	7 cut(s)	166, 411, 661, 718, 1162, 1809, 1825
BstMAI	GTCTC	4 cut(s)	854, 1165, 1589, 1808
BstMBI	GATC	7 cut(s)	163, 408, 658, 715, 1159, 1806, 1822
BstMCI	CGRYCG	1 cut(s)	411
BstMWI	GCNNNNNNNGC	7 cut(s)	98, 115, 367, 376, 1457, 1720, 2001
BstNI	CCWGG	3 cut(s)	447, 804, 1756
BstNSI	RCATGY	1 cut(s)	383
BstSCI	CCNGG	3 cut(s)	445, 802, 1754
BstUI	CGCG	1 cut(s)	159
BstV1I	GCAGC	1 cut(s)	2007
BstV2I	GAAGAC	1 cut(s)	163
BstX2I	RGATCY	2 cut(s)	658, 1159
BstXI	CCANNNNNNTGG	1 cut(s)	1755
BstYI	RGATCY	2 cut(s)	658, 1159
BstZ17I	GTATAC	1 cut(s)	466
BsuI	GTATCC	1 cut(s)	627
BsuRI	GGCC	9 cut(s)	142, 154, 800, 885, 1389, 1714, 1759, 1797, 2008
BtgI	CCRYGG	1 cut(s)	667
BtgZI	GCGATG	3 cut(s)	518, 841, 1392
BtrI	CACGTC	1 cut(s)	169
BtsCI	GGATG	2 cut(s)	277, 331
BtsI	GCAGTG	2 cut(s)	87, 990
BtsIMutI	CAGTG	4 cut(s)	87, 532, 888, 990
BveI	ACCTGC	2 cut(s)	1450, 1635
Cac8I	GCNNGC	6 cut(s)	278, 368, 381, 1077, 1761, 2006
CaiI	CAGNNNCTG	1 cut(s)	1457
CfoI	GCGC	3 cut(s)	161, 282, 601
Cfr13I	GGNCC	7 cut(s)	141, 152, 197, 799, 1211, 1624, 2007
CseI	GACGC	1 cut(s)	1097
Csp6I	GTAC	4 cut(s)	523, 869, 1013, 1082
CspCI	CAANNNNNGTGG	4 cut(s)	31, 66, 1774, 1809
CviAII	CATG	7 cut(s)	355, 380, 566, 609, 1208, 1799, 1983
CviQI	GTAC	4 cut(s)	523, 869, 1013, 1082
DdeI	CTNAG	7 cut(s)	918, 1236, 1300, 1446, 1478, 1730, 1838
DpnI	GATC	7 cut(s)	165, 410, 660, 717, 1161, 1808, 1824
DpnII	GATC	7 cut(s)	163, 408, 658, 715, 1159, 1806, 1822
DraIII	CACNNNGTG	1 cut(s)	632
EaeI	YGGCCR	4 cut(s)	883, 1712, 1757, 1795
Ecl136II	GAGCTC	1 cut(s)	1414
Eco130I	CCWWGG	3 cut(s)	975, 1264, 1557
Eco24I	GRGCYC	1 cut(s)	1416
Eco31I	GGTCTC	1 cut(s)	854
Eco47I	GGWCC	3 cut(s)	197, 1211, 1624
Eco47III	AGCGCT	1 cut(s)	600
Eco53kI	GAGCTC	1 cut(s)	1414
Eco57I	CTGAAG	2 cut(s)	359, 1148
EcoICRI	GAGCTC	1 cut(s)	1414
EcoNI	CCTNNNNNAGG	1 cut(s)	1222
EcoO109I	RGGNCCY	3 cut(s)	141, 197, 1624
EcoRI	GAATTC	1 cut(s)	1491
EcoRII	CCWGG	3 cut(s)	445, 802, 1754
EcoT14I	CCWWGG	3 cut(s)	975, 1264, 1557
EcoT22I	ATGCAT	1 cut(s)	562
EcoT38I	GRGCYC	1 cut(s)	1416
ErhI	CCWWGG	3 cut(s)	975, 1264, 1557
FaeI	CATG	7 cut(s)	358, 383, 569, 612, 1211, 1802, 1986
FaqI	GGGAC	3 cut(s)	496, 745, 1637
FatI	CATG	7 cut(s)	354, 379, 565, 608, 1207, 1798, 1982
FauI	CCCGC	1 cut(s)	1060
FauNDI	CATATG	1 cut(s)	1042
FbaI	TGATCA	1 cut(s)	1822
FblI	GTMKAC	1 cut(s)	465
Fnu4HI	GCNGC	4 cut(s)	102, 119, 886, 1996
FokI	GGATG	2 cut(s)	284, 318
FriOI	GRGCYC	1 cut(s)	1416
Fsp4HI	GCNGC	4 cut(s)	102, 119, 886, 1996
FspBI	CTAG	6 cut(s)	57, 1016, 1185, 1265, 1487, 1974
GlaI	GCGC	3 cut(s)	160, 281, 600
GluI	GCNGC	4 cut(s)	102, 119, 886, 1996
HaeII	RGCGCY	2 cut(s)	283, 602
HaeIII	GGCC	9 cut(s)	142, 154, 800, 885, 1389, 1714, 1759, 1797, 2008
HapII	CCGG	1 cut(s)	335
HgaI	GACGC	1 cut(s)	1097
HhaI	GCGC	3 cut(s)	161, 282, 601
Hin1II	CATG	7 cut(s)	358, 383, 569, 612, 1211, 1802, 1986
Hin6I	GCGC	3 cut(s)	159, 280, 599
HinP1I	GCGC	3 cut(s)	159, 280, 599
HinfI	GANTC	4 cut(s)	303, 672, 753, 1289
HpaII	CCGG	1 cut(s)	335
HphI	GGTGA	2 cut(s)	644, 1000
Hpy166II	GTNNAC	3 cut(s)	466, 1013, 1514
Hpy188I	TCNGA	9 cut(s)	26, 413, 685, 763, 1222, 1406, 1645, 1731, 1822
Hpy188III	TCNNGA	9 cut(s)	175, 307, 656, 738, 932, 1286, 1417, 1840, 1886
Hpy8I	GTNNAC	3 cut(s)	466, 1013, 1514
HpyAV	CCTTC	8 cut(s)	120, 210, 236, 451, 1224, 1243, 1306, 1919
HpyCH4III	ACNGT	5 cut(s)	76, 313, 527, 668, 1634
HpyCH4IV	ACGT	3 cut(s)	168, 645, 1524
HpyF10VI	GCNNNNNNNGC	7 cut(s)	98, 115, 367, 376, 1457, 1720, 2001
HpyF3I	CTNAG	7 cut(s)	918, 1236, 1300, 1446, 1478, 1730, 1838
HpySE526I	ACGT	3 cut(s)	168, 645, 1524
Hsp92II	CATG	7 cut(s)	358, 383, 569, 612, 1211, 1802, 1986
HspAI	GCGC	3 cut(s)	159, 280, 599
Ksp22I	TGATCA	1 cut(s)	1822
Kzo9I	GATC	7 cut(s)	163, 408, 658, 715, 1159, 1806, 1822
LmnI	GCTCC	4 cut(s)	358, 785, 980, 1605
Lsp1109I	GCAGC	1 cut(s)	2007
LweI	GCATC	7 cut(s)	240, 280, 495, 676, 864, 1555, 1680
MaeI	CTAG	6 cut(s)	57, 1016, 1185, 1265, 1487, 1974
MaeII	ACGT	3 cut(s)	168, 645, 1524
MaeIII	GTNAC	5 cut(s)	307, 896, 940, 988, 1417
MalI	GATC	7 cut(s)	165, 410, 660, 717, 1161, 1808, 1824
MbiI	CCGCTC	1 cut(s)	1608
MboI	GATC	7 cut(s)	163, 408, 658, 715, 1159, 1806, 1822
MboII	GAAGA	7 cut(s)	163, 196, 259, 365, 1154, 1918, 1964
MflI	RGATCY	2 cut(s)	658, 1159
MhlI	GDGCHC	1 cut(s)	1416
MlsI	TGGCCA	2 cut(s)	1759, 1797
MluNI	TGGCCA	2 cut(s)	1759, 1797
MlyI	GAGTC	1 cut(s)	681
MmeI	TCCRAC	2 cut(s)	760, 1384
Mox20I	TGGCCA	2 cut(s)	1759, 1797
Mph1103I	ATGCAT	1 cut(s)	562
MroXI	GAANNNNTTC	1 cut(s)	768
MscI	TGGCCA	2 cut(s)	1759, 1797
MseI	TTAA	5 cut(s)	1086, 1328, 1362, 1650, 1934
MslI	CAYNNNNRTG	1 cut(s)	1546
Msp20I	TGGCCA	2 cut(s)	1759, 1797
MspA1I	CMGCKG	1 cut(s)	1124
MspI	CCGG	1 cut(s)	335
MspR9I	CCNGG	3 cut(s)	447, 804, 1756
Mva1269I	GAATGC	1 cut(s)	352
MvaI	CCWGG	3 cut(s)	447, 804, 1756
MvnI	CGCG	1 cut(s)	159
MwoI	GCNNNNNNNGC	7 cut(s)	98, 115, 367, 376, 1457, 1720, 2001
NdeI	CATATG	1 cut(s)	1042
NdeII	GATC	7 cut(s)	163, 408, 658, 715, 1159, 1806, 1822
NlaIII	CATG	7 cut(s)	358, 383, 569, 612, 1211, 1802, 1986
NlaIV	GGNNCC	4 cut(s)	17, 198, 801, 1625
NmeAIII	GCCGAG	3 cut(s)	162, 1415, 1740
NmuCI	GTSAC	4 cut(s)	307, 896, 988, 1417
NsiI	ATGCAT	1 cut(s)	562
NspI	RCATGY	1 cut(s)	383
NspV	TTCGAA	1 cut(s)	835
OliI	CACNNNNGTG	1 cut(s)	1546
PaeI	GCATGC	1 cut(s)	383
PaqCI	CACCTGC	1 cut(s)	1450
PctI	GAATGC	1 cut(s)	352
PdmI	GAANNNNTTC	1 cut(s)	768
PfeI	GAWTC	3 cut(s)	303, 753, 1289
PflFI	GACNNNGTC	1 cut(s)	327
PflMI	CCANNNNNTGG	1 cut(s)	668
PkrI	GCNGC	4 cut(s)	103, 120, 887, 1997
Ple19I	CGATCG	1 cut(s)	411
PleI	GAGTC	1 cut(s)	680
PpsI	GAGTC	1 cut(s)	680
PpuMI	RGGWCCY	2 cut(s)	197, 1624
Psp124BI	GAGCTC	1 cut(s)	1416
Psp5II	RGGWCCY	2 cut(s)	197, 1624
Psp6I	CCWGG	3 cut(s)	445, 802, 1754
PspGI	CCWGG	3 cut(s)	445, 802, 1754
PspN4I	GGNNCC	4 cut(s)	17, 198, 801, 1625
PspPI	GGNCC	7 cut(s)	141, 152, 197, 799, 1211, 1624, 2007
PspPPI	RGGWCCY	2 cut(s)	197, 1624
PstNI	CAGNNNCTG	1 cut(s)	1457
PsuI	RGATCY	2 cut(s)	658, 1159
PsyI	GACNNNGTC	1 cut(s)	327
PvuI	CGATCG	1 cut(s)	411
RsaI	GTAC	4 cut(s)	524, 870, 1014, 1083
RsaNI	GTAC	4 cut(s)	523, 869, 1013, 1082
RseI	CAYNNNNRTG	1 cut(s)	1546
SacI	GAGCTC	1 cut(s)	1416
SaqAI	TTAA	5 cut(s)	1086, 1328, 1362, 1650, 1934
SatI	GCNGC	4 cut(s)	102, 119, 886, 1996
Sau3AI	GATC	7 cut(s)	163, 408, 658, 715, 1159, 1806, 1822
Sau96I	GGNCC	7 cut(s)	141, 152, 197, 799, 1211, 1624, 2007
ScaI	AGTACT	1 cut(s)	1083
SchI	GAGTC	1 cut(s)	681
ScrFI	CCNGG	3 cut(s)	447, 804, 1756
SduI	GDGCHC	1 cut(s)	1416
SfaNI	GCATC	7 cut(s)	240, 280, 495, 676, 864, 1555, 1680
SfuI	TTCGAA	1 cut(s)	835
SinI	GGWCC	3 cut(s)	197, 1211, 1624
SmiMI	CAYNNNNRTG	1 cut(s)	1546
SphI	GCATGC	1 cut(s)	383
SsiI	CCGC	9 cut(s)	101, 119, 181, 321, 886, 1067, 1122, 1460, 1608
SspI	AATATT	1 cut(s)	235
SspMI	CTAG	6 cut(s)	57, 1016, 1185, 1265, 1487, 1974
SstI	GAGCTC	1 cut(s)	1416
StyD4I	CCNGG	3 cut(s)	445, 802, 1754
StyI	CCWWGG	3 cut(s)	975, 1264, 1557
TaaI	ACNGT	5 cut(s)	76, 313, 527, 668, 1634
TaiI	ACGT	3 cut(s)	171, 648, 1527
TaqI	TCGA	5 cut(s)	126, 174, 288, 835, 2031
TaqII	GACCGA	1 cut(s)	1436
TatI	WGTACW	4 cut(s)	522, 868, 1012, 1081
TauI	GCSGC	3 cut(s)	104, 121, 888
TfiI	GAWTC	3 cut(s)	303, 753, 1289
Tru1I	TTAA	5 cut(s)	1086, 1328, 1362, 1650, 1934
Tru9I	TTAA	5 cut(s)	1086, 1328, 1362, 1650, 1934
TscAI	CASTG	4 cut(s)	94, 532, 895, 990
TseFI	GTSAC	4 cut(s)	307, 896, 988, 1417
TseI	GCWGC	1 cut(s)	1995
Tsp45I	GTSAC	4 cut(s)	307, 896, 988, 1417
TspDTI	ATGAA	4 cut(s)	629, 745, 879, 1848
TspRI	CASTG	4 cut(s)	94, 532, 895, 990
Tth111I	GACNNNGTC	1 cut(s)	327
Van91I	CCANNNNNTGG	1 cut(s)	668
VpaK11BI	GGWCC	3 cut(s)	197, 1211, 1624
XagI	CCTNNNNNAGG	1 cut(s)	1222
XapI	RAATTY	4 cut(s)	451, 475, 636, 1491
XceI	RCATGY	1 cut(s)	383
XmaJI	CCTAGG	1 cut(s)	1264
XmiI	GTMKAC	1 cut(s)	465
XmnI	GAANNNNTTC	1 cut(s)	768
XspI	CTAG	6 cut(s)	57, 1016, 1185, 1265, 1487, 1974
ZrmI	AGTACT	1 cut(s)	1083
Zsp2I	ATGCAT	1 cut(s)	562

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.